geney 1.4.32__py2.py3-none-any.whl → 1.4.33__py2.py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Potentially problematic release.

This version of geney might be problematic. Click here for more details.

Files changed (5) hide show
  1. geney/utils/SeqMats.py +1 -1
  2. {geney-1.4.32.dist-info → geney-1.4.33.dist-info}/METADATA +1 -1
  3. {geney-1.4.32.dist-info → geney-1.4.33.dist-info}/RECORD +5 -5
  4. {geney-1.4.32.dist-info → geney-1.4.33.dist-info}/WHEEL +0 -0
  5. {geney-1.4.32.dist-info → geney-1.4.33.dist-info}/top_level.txt +0 -0
geney/utils/SeqMats.py CHANGED
@@ -438,7 +438,7 @@ class SeqMat:
438
438
 
439
439
  # Run the splicing prediction engine (function assumed to be defined externally)
440
440
  from .splicing_utils import run_splicing_engine
441
- donor_probs, acceptor_probs = run_splicing_engine(seq=seq, splicing_engine=engine)
441
+ donor_probs, acceptor_probs = run_splicing_engine(seq=seq, engine=engine)
442
442
  # Trim off the fixed flanks before returning results.
443
443
  seq = seq[5000:-5000]
444
444
  indices = indices[5000:-5000]
{geney-1.4.32.dist-info → geney-1.4.33.dist-info}/METADATA RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: geney
3
- Version: 1.4.32
3
+ Version: 1.4.33
4
4
  Summary: A Python package for gene expression modeling.
5
5
  Home-page: https://github.com/nicolaslynn/geney
6
6
  Author: Nicolas Lynn
{geney-1.4.32.dist-info → geney-1.4.33.dist-info}/RECORD RENAMED
@@ -37,7 +37,7 @@ geney/translation_initiation/tis_utils.py,sha256=AF3siFjuQH-Rs44EV-80zHdbxRMvN4w
37
37
  geney/translation_initiation/resources/kozak_pssm.json,sha256=pcd0Olziutq-6H3mFWDCD9cujQ_AlZO-iiOvBl82hqE,1165
38
38
  geney/translation_initiation/resources/tis_regressor_model.joblib,sha256=IXb4DUDhJ5rBDKcqMk9zE3ECTZZcdj7Jixz3KpoZ7OA,2592025
39
39
  geney/utils/Fasta_segment.py,sha256=weB5NJ65P0XiyAJCiCHx4T9sHC1pWLpuQeOy0B85gyg,11364
40
- geney/utils/SeqMats.py,sha256=-eoSKJFZR5OelhjXVkTIJbqYgp2xoWvgo8KWfKIBkRk,18197
40
+ geney/utils/SeqMats.py,sha256=RowgiQjP_PF1wl9EZFK_L8wJ4eODlg7UdK9SHFp14XY,18188
41
41
  geney/utils/SeqMatsOld.py,sha256=syRU5DAuTh3xUfGW_qP9wlcBO5pHsG_y5PlrfXTIxUY,18502
42
42
  geney/utils/TranscriptLibrary.py,sha256=W1hv4Y8wRlmwTs3iFdn4_IqS-2suVDzZe4fwti2KbR4,2076
43
43
  geney/utils/__init__.py,sha256=-nJ-DMx1JzP-ZCe_QuQCeM0ZYIT_16jxoXDhUaO_4Oc,714
@@ -47,7 +47,7 @@ geney/utils/spliceai_pytorch_utils.py,sha256=wwBoT2utKZjjaWAUo11mSoympVK1vkNxAxc
47
47
  geney/utils/spliceai_utils.py,sha256=VtrIbjyQxk_3lw86eWjftRYyal9OzxArJ0GV5u_ymTg,2721
48
48
  geney/utils/splicing_utils.py,sha256=Z0Z645fJhFnszpIueeMNaa-NMRLFFyJoRBR_yFbzrN0,20965
49
49
  geney/utils/utils.py,sha256=GXqlatNhix1akt3fburNzIwhiW9ZdCQSt2vmU80neyA,2370
50
- geney-1.4.32.dist-info/METADATA,sha256=SLfl8T6fgOlpb2Plf1iJxcaD-IXjclU4ZFcD3SWZTbM,990
51
- geney-1.4.32.dist-info/WHEEL,sha256=AHX6tWk3qWuce7vKLrj7lnulVHEdWoltgauo8bgCXgU,109
52
- geney-1.4.32.dist-info/top_level.txt,sha256=O-FuNUMb5fn9dhZ-dYCgF0aZtfi1EslMstnzhc5IIVo,6
53
- geney-1.4.32.dist-info/RECORD,,
50
+ geney-1.4.33.dist-info/METADATA,sha256=SSXCbO0aoXUT9WvJMMLbLBLqxsYP20JEG8h8LPhkrHg,990
51
+ geney-1.4.33.dist-info/WHEEL,sha256=AHX6tWk3qWuce7vKLrj7lnulVHEdWoltgauo8bgCXgU,109
52
+ geney-1.4.33.dist-info/top_level.txt,sha256=O-FuNUMb5fn9dhZ-dYCgF0aZtfi1EslMstnzhc5IIVo,6
53
+ geney-1.4.33.dist-info/RECORD,,
{geney-1.4.32.dist-info → geney-1.4.33.dist-info}/WHEEL RENAMED
File without changes