geney 1.4.20__py2.py3-none-any.whl → 1.4.21__py2.py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Potentially problematic release.
This version of geney might be problematic. Click here for more details.
geney/Transcript.py
CHANGED
|
@@ -5,7 +5,7 @@ import copy
|
|
|
5
5
|
from Bio.Seq import Seq # Assuming Biopython is used
|
|
6
6
|
from . import config
|
|
7
7
|
from .utils.utils import unload_pickle
|
|
8
|
-
from .utils.
|
|
8
|
+
from .utils.SeqMats import SeqMat #, MutSeqMat
|
|
9
9
|
from .utils.Fasta_segment import Fasta_segment
|
|
10
10
|
|
|
11
11
|
class Transcript:
|
|
@@ -3,7 +3,7 @@ geney/Gene.py,sha256=6x1sEZV50Il4oydegW6iHIF12EZTGexniG3YUD-3DfM,7036
|
|
|
3
3
|
geney/Oncosplice.py,sha256=ETAvMl_Oq6mEJQHPNwdDO5csX6Ahuped_om10KifCyM,17739
|
|
4
4
|
geney/SeqMats.py,sha256=9-eJnfU2w3LGc0XvVvFEO_QrBneTkC6xkZKDfTcEw5o,19282
|
|
5
5
|
geney/SpliceSimulator.py,sha256=iF6feVeSnsKFmn3WV60CgWLI0_rSLgpq5fVFL1IOv_4,18491
|
|
6
|
-
geney/Transcript.py,sha256=
|
|
6
|
+
geney/Transcript.py,sha256=Ltlcnp93s3HxMiweUuyc4Ri3QT42l1qUtiBYH3RITFs,14464
|
|
7
7
|
geney/__init__.py,sha256=YLWXJS53yeryp6nVhCgFg3_Du9Guj9y3iSrdfx61q5Y,3017
|
|
8
8
|
geney/_config_setup.py,sha256=nblcGU3HIt8YjdrAoGfbEVKRxwJKv0PikJ5-7AL6axQ,723
|
|
9
9
|
geney/_graphic_utils.py,sha256=oMsBpB9YeEn96gGpKh4MmtagJffWZbk-xPrIwHvkFhA,11016
|
|
@@ -46,7 +46,7 @@ geney/utils/pangolin_utils.py,sha256=JQSPbWxdzqGFYfWQktkfLMaMSGR28eGQhNzO7MLMe5M
|
|
|
46
46
|
geney/utils/spliceai_utils.py,sha256=VtrIbjyQxk_3lw86eWjftRYyal9OzxArJ0GV5u_ymTg,2721
|
|
47
47
|
geney/utils/splicing_utils.py,sha256=vPCGnCPR1ooEZEHR79yFHLmRQXEJHXEQjjxpBR-YWOs,20635
|
|
48
48
|
geney/utils/utils.py,sha256=m51Vd0cEbrcIHo6_8BAuI9YSPcKRs22e5LfVd2Qj6Is,2181
|
|
49
|
-
geney-1.4.
|
|
50
|
-
geney-1.4.
|
|
51
|
-
geney-1.4.
|
|
52
|
-
geney-1.4.
|
|
49
|
+
geney-1.4.21.dist-info/METADATA,sha256=m-32P-otBh8Nj1P_rBrqgE6wYPEA04pcTV1tGxuTkWM,990
|
|
50
|
+
geney-1.4.21.dist-info/WHEEL,sha256=AHX6tWk3qWuce7vKLrj7lnulVHEdWoltgauo8bgCXgU,109
|
|
51
|
+
geney-1.4.21.dist-info/top_level.txt,sha256=O-FuNUMb5fn9dhZ-dYCgF0aZtfi1EslMstnzhc5IIVo,6
|
|
52
|
+
geney-1.4.21.dist-info/RECORD,,
|
|
File without changes
|
|
File without changes
|