geney 1.3.6__py2.py3-none-any.whl → 1.3.7__py2.py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Potentially problematic release.


This version of geney might be problematic. Click here for more details.

geney/Fasta_segment.py CHANGED
@@ -104,7 +104,7 @@ class Fasta_segment():
104
104
  indices = list(range(start_loc, end_loc + 1))
105
105
  assert len(seq) == len(
106
106
  indices), f'reference data not compatible; {len(seq)}, {len(indices)}, start: {start_loc}, end: {end_loc}, {file}'
107
- return seq, indices
107
+ return {"seq": seq, "indices": indices}
108
108
 
109
109
  def __compute_file_stats(self, fp) -> tuple:
110
110
  '''
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: geney
3
- Version: 1.3.6
3
+ Version: 1.3.7
4
4
  Summary: A Python package for gene expression modeling.
5
5
  Home-page: https://github.com/nicolaslynn/geney
6
6
  Author: Nicolas Lynn
@@ -1,4 +1,4 @@
1
- geney/Fasta_segment.py,sha256=0zCdzPUbDeM9Rz642woH5Q94pwI46O0fE3H8w0XWebc,11255
1
+ geney/Fasta_segment.py,sha256=99HxNGNh_MfdVW6hhtlb1vOn7eSmT7oFoEfHDFMxG8w,11275
2
2
  geney/Gene.py,sha256=JGWtfA6-d1W3I9YRASwaF8vaZ6CCuY0KEawQNdloIqY,6259
3
3
  geney/SeqMats.py,sha256=jkXmXAs0OpnFeyCfiJcKKpHHSi9JpKgiOIwsu63e1CQ,18557
4
4
  geney/Transcript.py,sha256=eRZXVVxDVBbv0l385bnAOBFRBSzBwppXcbBq8KXkwlo,14443
@@ -24,7 +24,7 @@ geney/translation_initiation/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NM
24
24
  geney/translation_initiation/tis_utils.py,sha256=AF3siFjuQH-Rs44EV-80zHdbxRMvN4woLFSHroWIETc,4448
25
25
  geney/translation_initiation/resources/kozak_pssm.json,sha256=pcd0Olziutq-6H3mFWDCD9cujQ_AlZO-iiOvBl82hqE,1165
26
26
  geney/translation_initiation/resources/tis_regressor_model.joblib,sha256=IXb4DUDhJ5rBDKcqMk9zE3ECTZZcdj7Jixz3KpoZ7OA,2592025
27
- geney-1.3.6.dist-info/METADATA,sha256=mSYoRjKMbxl35qg7ITTEhAm3qyPSMfzBxUmDm1ZiLyQ,994
28
- geney-1.3.6.dist-info/WHEEL,sha256=fS9sRbCBHs7VFcwJLnLXN1MZRR0_TVTxvXKzOnaSFs8,110
29
- geney-1.3.6.dist-info/top_level.txt,sha256=O-FuNUMb5fn9dhZ-dYCgF0aZtfi1EslMstnzhc5IIVo,6
30
- geney-1.3.6.dist-info/RECORD,,
27
+ geney-1.3.7.dist-info/METADATA,sha256=lf_Sup4GRMD5YZZUuIpO0WKbhNX5NBJ53R6AQR5AkfU,994
28
+ geney-1.3.7.dist-info/WHEEL,sha256=fS9sRbCBHs7VFcwJLnLXN1MZRR0_TVTxvXKzOnaSFs8,110
29
+ geney-1.3.7.dist-info/top_level.txt,sha256=O-FuNUMb5fn9dhZ-dYCgF0aZtfi1EslMstnzhc5IIVo,6
30
+ geney-1.3.7.dist-info/RECORD,,
File without changes