geney 1.2.66__py2.py3-none-any.whl → 1.2.67__py2.py3-none-any.whl

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Files changed (5) hide show
  1. geney/splicing_utils.py +1 -1
  2. {geney-1.2.66.dist-info → geney-1.2.67.dist-info}/METADATA +1 -1
  3. {geney-1.2.66.dist-info → geney-1.2.67.dist-info}/RECORD +5 -5
  4. {geney-1.2.66.dist-info → geney-1.2.67.dist-info}/WHEEL +0 -0
  5. {geney-1.2.66.dist-info → geney-1.2.67.dist-info}/top_level.txt +0 -0
geney/splicing_utils.py CHANGED
@@ -175,7 +175,7 @@ def find_transcript_missplicing(transcript, mutations, context=5000, window=2500
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  length = var.seqmat.shape[-1]
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  center_index = var.rel_pos(center)
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  if center_index is None:
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- raise IndexError, "Center index must not be none... Issue with mutations... They must not be within the transcript."
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+ raise IndexError("Center index must not be none... Issue with mutations... They must not be within the transcript.")
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  var_start_pad = max(0, total_context - center_index)
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  var_end_pad = max(0, total_context - (length - center_index))
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{geney-1.2.66.dist-info → geney-1.2.67.dist-info}/METADATA RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: geney
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- Version: 1.2.66
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+ Version: 1.2.67
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  Summary: A Python package for gene expression modeling.
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  Home-page: https://github.com/nicolaslynn/geney
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  Author: Nicolas Lynn
{geney-1.2.66.dist-info → geney-1.2.67.dist-info}/RECORD RENAMED
@@ -11,7 +11,7 @@ geney/pangolin_utils.py,sha256=i5j5vEMCWOTIa1mRP2377BAhlUFZjHBzTQBips4lA_4,2934
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  geney/power_utils.py,sha256=MehZFUdkJ2EFUot709yPEDxSkXmH5XevMebX2HD768A,7330
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  geney/seqmat_utils.py,sha256=prWq3d3rPiyA_evQpY3FP5I-NQFuf7py7Ene8fNZ5DA,19271
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  geney/spliceai_utils.py,sha256=PFIhTK8Ihrj-cv5tgRN0UFPYEmC4uxtqXSP9bBLnZRM,3077
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- geney/splicing_utils.py,sha256=Oj-K4SpMnwnoORBJEB_MHy-K3fGOZlzzWXkFitVaI_I,19218
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+ geney/splicing_utils.py,sha256=faXlBzxohKE02_Jlx6imIP1DKWhGrwQ6mrLldBlqkNU,19218
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  geney/survival_utils.py,sha256=KnAzEviMuXh6SnVXId9PgsFLSbgkduTvYoIthxN7FPA,6886
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  geney/tcga_utils.py,sha256=D_BNHm-D_K408dlcJm3hzH2c6QNFjQsKvUcOPiQRk7g,17612
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  geney/tis_utils.py,sha256=2makfGfVlDFVIbxzXE85AY9jmAjcNmxyIAxjvkRA5LY,7396
@@ -20,7 +20,7 @@ geney/translation_initiation/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NM
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  geney/translation_initiation/tis_utils.py,sha256=AF3siFjuQH-Rs44EV-80zHdbxRMvN4woLFSHroWIETc,4448
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  geney/translation_initiation/resources/kozak_pssm.json,sha256=pcd0Olziutq-6H3mFWDCD9cujQ_AlZO-iiOvBl82hqE,1165
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  geney/translation_initiation/resources/tis_regressor_model.joblib,sha256=IXb4DUDhJ5rBDKcqMk9zE3ECTZZcdj7Jixz3KpoZ7OA,2592025
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- geney-1.2.66.dist-info/METADATA,sha256=wifLSvv7_r3vXe7n-3XN-8iwWz-PnZrn6OkqYbR-SnM,948
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- geney-1.2.66.dist-info/WHEEL,sha256=fS9sRbCBHs7VFcwJLnLXN1MZRR0_TVTxvXKzOnaSFs8,110
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- geney-1.2.66.dist-info/top_level.txt,sha256=O-FuNUMb5fn9dhZ-dYCgF0aZtfi1EslMstnzhc5IIVo,6
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- geney-1.2.66.dist-info/RECORD,,
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+ geney-1.2.67.dist-info/METADATA,sha256=RstIg2k5z5muDUwVglNvZpJQEsMqiXB9jcBaVdvK6S4,948
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+ geney-1.2.67.dist-info/WHEEL,sha256=fS9sRbCBHs7VFcwJLnLXN1MZRR0_TVTxvXKzOnaSFs8,110
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+ geney-1.2.67.dist-info/top_level.txt,sha256=O-FuNUMb5fn9dhZ-dYCgF0aZtfi1EslMstnzhc5IIVo,6
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+ geney-1.2.67.dist-info/RECORD,,
{geney-1.2.66.dist-info → geney-1.2.67.dist-info}/WHEEL RENAMED
File without changes