geney 1.2.2__py2.py3-none-any.whl → 1.2.3__py2.py3-none-any.whl

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Files changed (5) hide show
  1. geney/oncosplice.py +1 -1
  2. {geney-1.2.2.dist-info → geney-1.2.3.dist-info}/METADATA +1 -1
  3. {geney-1.2.2.dist-info → geney-1.2.3.dist-info}/RECORD +5 -5
  4. {geney-1.2.2.dist-info → geney-1.2.3.dist-info}/WHEEL +0 -0
  5. {geney-1.2.2.dist-info → geney-1.2.3.dist-info}/top_level.txt +0 -0
geney/oncosplice.py CHANGED
@@ -271,7 +271,7 @@ class Gene:
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  if tid not in self.transcripts:
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  raise AttributeError(f"Transcript '{tid}' not found in gene '{self.gene_name}'.")
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- return Transcript(self.transcripts[tid])
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+ return Transcript(self.transcripts[tid], organism=self.organism)
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  def run_transcripts(self, primary_transcript=False, protein_coding=False):
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  for tid, annotations in self.transcripts.items():
{geney-1.2.2.dist-info → geney-1.2.3.dist-info}/METADATA RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: geney
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- Version: 1.2.2
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+ Version: 1.2.3
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  Summary: A Python package for gene expression modeling.
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  Home-page: https://github.com/nicolaslynn/geney
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  Author: Nicolas Lynn
{geney-1.2.2.dist-info → geney-1.2.3.dist-info}/RECORD RENAMED
@@ -9,7 +9,7 @@ geney/gtex.py,sha256=asL2lHyU5KsbWpV096vkf1Ka7hSo_RRfZqw7p5nERmE,1919
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  geney/gtex_utils.py,sha256=asL2lHyU5KsbWpV096vkf1Ka7hSo_RRfZqw7p5nERmE,1919
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  geney/immune_utils.py,sha256=ZRni5ttrhpYBnmNr0d0ZatIbNPYs4nmQuoUO00SpsS4,5271
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  geney/netchop.py,sha256=AMiy9YsdTmX4B3k3Y5Yh7EmoGAojM1O3AzhPKOiB--g,3050
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- geney/oncosplice.py,sha256=_uQ13nuOFNNVsl_7EzCmJtC9WLbzX9zEcqoA7PvkQWY,71786
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+ geney/oncosplice.py,sha256=xDzCLivFyurx-qlQo9cyrV-9KJ9VykYAb8lY9DDWl7Q,71810
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  geney/oncosplice_mouse.py,sha256=LYLOukI9qI1IBkyl1qVRFR5d1NAw7Orlj8Zth-4xCW8,12962
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  geney/oncosplice_pipeline.py,sha256=hpGqFHOdn8i8tvvs1-t3-G9Ko18zInwoDXBJbbrfbC4,68036
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  geney/performance_utils.py,sha256=FQt7rA4r-Wuq3kceCxsSuMfj3wU1tMG8QnbL59aBohs,4700
@@ -45,7 +45,7 @@ geney/translation_initiation/resources/kozak_pssm.json,sha256=pcd0Olziutq-6H3mFW
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  geney/translation_initiation/resources/tis_regressor_model.joblib,sha256=IXb4DUDhJ5rBDKcqMk9zE3ECTZZcdj7Jixz3KpoZ7OA,2592025
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  geney/translation_termination/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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  geney/translation_termination/tts_utils.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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- geney-1.2.2.dist-info/METADATA,sha256=M-hFK8XG5ZbWtH0gsZvGgDBH18l6iGuDKT8xOCGYDSs,1198
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- geney-1.2.2.dist-info/WHEEL,sha256=iYlv5fX357PQyRT2o6tw1bN-YcKFFHKqB_LwHO5wP-g,110
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- geney-1.2.2.dist-info/top_level.txt,sha256=O-FuNUMb5fn9dhZ-dYCgF0aZtfi1EslMstnzhc5IIVo,6
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- geney-1.2.2.dist-info/RECORD,,
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+ geney-1.2.3.dist-info/METADATA,sha256=K6ufQEQw0PTbczOxkWFW26U4URgwy92Q9Aqp8BhsKIA,1198
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+ geney-1.2.3.dist-info/WHEEL,sha256=iYlv5fX357PQyRT2o6tw1bN-YcKFFHKqB_LwHO5wP-g,110
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+ geney-1.2.3.dist-info/top_level.txt,sha256=O-FuNUMb5fn9dhZ-dYCgF0aZtfi1EslMstnzhc5IIVo,6
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+ geney-1.2.3.dist-info/RECORD,,
{geney-1.2.2.dist-info → geney-1.2.3.dist-info}/WHEEL RENAMED
File without changes