geney 1.1.12__py2.py3-none-any.whl → 1.1.13__py2.py3-none-any.whl

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Files changed (5) hide show
  1. geney/oncosplice.py +1 -1
  2. {geney-1.1.12.dist-info → geney-1.1.13.dist-info}/METADATA +1 -1
  3. {geney-1.1.12.dist-info → geney-1.1.13.dist-info}/RECORD +5 -5
  4. {geney-1.1.12.dist-info → geney-1.1.13.dist-info}/WHEEL +0 -0
  5. {geney-1.1.12.dist-info → geney-1.1.13.dist-info}/top_level.txt +0 -0
geney/oncosplice.py CHANGED
@@ -1706,7 +1706,7 @@ def find_ss_changes(ref_dct, mut_dct, known_splice_sites, threshold=0.5):
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  new_dict.items() if v >= threshold and k not in known_splice_sites} # if (k not in known_splice_sites and v >= threshold) or (v > 0.45)}
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  deleted_pos = {k: {'delta': round(float(v), 3), 'absolute': round(float(mut_dct.get(k, 0)), 3)} for k, v in
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- new_dict.items() if v >= threshold and k in known_splice_sites} #if k in known_splice_sites and v <= -threshold}
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+ new_dict.items() if -v >= threshold and k in known_splice_sites} #if k in known_splice_sites and v <= -threshold}
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  return discovered_pos, deleted_pos
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{geney-1.1.12.dist-info → geney-1.1.13.dist-info}/METADATA RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: geney
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- Version: 1.1.12
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+ Version: 1.1.13
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  Summary: A Python package for gene expression modeling.
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  Home-page: https://github.com/nicolaslynn/geney
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  Author: Nicolas Lynn
{geney-1.1.12.dist-info → geney-1.1.13.dist-info}/RECORD RENAMED
@@ -9,7 +9,7 @@ geney/gtex.py,sha256=asL2lHyU5KsbWpV096vkf1Ka7hSo_RRfZqw7p5nERmE,1919
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  geney/gtex_utils.py,sha256=asL2lHyU5KsbWpV096vkf1Ka7hSo_RRfZqw7p5nERmE,1919
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  geney/immune_utils.py,sha256=elxjQyB52lYXrrt3sX6vtYlr_pTFEeCFzmEMP2qlPwA,5300
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  geney/netchop.py,sha256=AMiy9YsdTmX4B3k3Y5Yh7EmoGAojM1O3AzhPKOiB--g,3050
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- geney/oncosplice.py,sha256=BZMK3TzwKqObih79b1KNKMHvyJhB8W6Tj_kawmPFrqE,112110
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+ geney/oncosplice.py,sha256=cQYqBPeNqbTnSqJSKZxIjekWXVlgnqIoa7UXVFQ2PtE,112111
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  geney/oncosplice_pipeline.py,sha256=hpGqFHOdn8i8tvvs1-t3-G9Ko18zInwoDXBJbbrfbC4,68036
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  geney/performance_utils.py,sha256=FQt7rA4r-Wuq3kceCxsSuMfj3wU1tMG8QnbL59aBohs,4700
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  geney/power_utils.py,sha256=6InuDm1jSrsgR-F_LmdMTbuQwty2OdYjwfGGaAPhaRI,7268
@@ -44,7 +44,7 @@ geney/translation_initiation/resources/kozak_pssm.json,sha256=pcd0Olziutq-6H3mFW
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  geney/translation_initiation/resources/tis_regressor_model.joblib,sha256=IXb4DUDhJ5rBDKcqMk9zE3ECTZZcdj7Jixz3KpoZ7OA,2592025
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  geney/translation_termination/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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  geney/translation_termination/tts_utils.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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- geney-1.1.12.dist-info/METADATA,sha256=YuSzsBvZGYcsKL7zcekpodsJUAkFqulI-aJ-_cC8JSU,1131
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- geney-1.1.12.dist-info/WHEEL,sha256=iYlv5fX357PQyRT2o6tw1bN-YcKFFHKqB_LwHO5wP-g,110
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- geney-1.1.12.dist-info/top_level.txt,sha256=O-FuNUMb5fn9dhZ-dYCgF0aZtfi1EslMstnzhc5IIVo,6
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- geney-1.1.12.dist-info/RECORD,,
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+ geney-1.1.13.dist-info/METADATA,sha256=JLpUYMSjNwVBkmZYRCfzoW4KdVyFz3oL1o0qw5hIFfA,1131
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+ geney-1.1.13.dist-info/WHEEL,sha256=iYlv5fX357PQyRT2o6tw1bN-YcKFFHKqB_LwHO5wP-g,110
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+ geney-1.1.13.dist-info/top_level.txt,sha256=O-FuNUMb5fn9dhZ-dYCgF0aZtfi1EslMstnzhc5IIVo,6
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+ geney-1.1.13.dist-info/RECORD,,
{geney-1.1.12.dist-info → geney-1.1.13.dist-info}/WHEEL RENAMED
File without changes