fvs-python 0.2.3__py3-none-any.whl

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Files changed (149) hide show
  1. fvs_python-0.2.3.dist-info/METADATA +254 -0
  2. fvs_python-0.2.3.dist-info/RECORD +149 -0
  3. fvs_python-0.2.3.dist-info/WHEEL +5 -0
  4. fvs_python-0.2.3.dist-info/licenses/LICENSE +21 -0
  5. fvs_python-0.2.3.dist-info/top_level.txt +1 -0
  6. pyfvs/__init__.py +107 -0
  7. pyfvs/bark_ratio.py +323 -0
  8. pyfvs/cfg/CFG_README.md +73 -0
  9. pyfvs/cfg/dbh_bounding_table_4_7_1_8.json +103 -0
  10. pyfvs/cfg/ecounit_coefficients_table_4_7_1_5.json +981 -0
  11. pyfvs/cfg/ecounit_coefficients_table_4_7_1_6.json +856 -0
  12. pyfvs/cfg/forest_type_mapping_table_4_7_1_4.json +38 -0
  13. pyfvs/cfg/fortype_coefficients_table_4_7_1_3.json +1183 -0
  14. pyfvs/cfg/functional_forms.yaml +111 -0
  15. pyfvs/cfg/growth_model_parameters.yaml +98 -0
  16. pyfvs/cfg/plant_values_table_4_7_1_7.json +15 -0
  17. pyfvs/cfg/site_index_transformation.yaml +113 -0
  18. pyfvs/cfg/sn_bark_ratio_coefficients.json +115 -0
  19. pyfvs/cfg/sn_crown_competition_factor.json +109 -0
  20. pyfvs/cfg/sn_crown_ratio_coefficients.json +956 -0
  21. pyfvs/cfg/sn_crown_width_coefficients.json +1664 -0
  22. pyfvs/cfg/sn_diameter_growth_coefficients.json +300 -0
  23. pyfvs/cfg/sn_height_diameter_coefficients.json +97 -0
  24. pyfvs/cfg/sn_large_tree_diameter_growth.json +191 -0
  25. pyfvs/cfg/sn_large_tree_height_growth.json +229 -0
  26. pyfvs/cfg/sn_large_tree_height_growth_coefficients.json +1187 -0
  27. pyfvs/cfg/sn_mortality_model.json +176 -0
  28. pyfvs/cfg/sn_regeneration_model.json +252 -0
  29. pyfvs/cfg/sn_relative_site_index.json +263 -0
  30. pyfvs/cfg/sn_small_tree_height_growth.json +879 -0
  31. pyfvs/cfg/sn_species_codes_table.json +728 -0
  32. pyfvs/cfg/sn_stand_density_index.json +398 -0
  33. pyfvs/cfg/species/ab_american_basswood.yaml +251 -0
  34. pyfvs/cfg/species/ae_american_elm.yaml +240 -0
  35. pyfvs/cfg/species/ah_american_hornbeam.yaml +250 -0
  36. pyfvs/cfg/species/ap_american_plum.yaml +251 -0
  37. pyfvs/cfg/species/as_american_sycamore.yaml +253 -0
  38. pyfvs/cfg/species/ba_black_ash.yaml +254 -0
  39. pyfvs/cfg/species/bb_basswood.yaml +254 -0
  40. pyfvs/cfg/species/bc_black_cherry.yaml +254 -0
  41. pyfvs/cfg/species/bd_sweet_birch.yaml +252 -0
  42. pyfvs/cfg/species/be_american_beech.yaml +251 -0
  43. pyfvs/cfg/species/bg_black_gum.yaml +252 -0
  44. pyfvs/cfg/species/bj_blue_jay.yaml +254 -0
  45. pyfvs/cfg/species/bk_sugar_maple.yaml +251 -0
  46. pyfvs/cfg/species/bn_butternut.yaml +252 -0
  47. pyfvs/cfg/species/bo_red_maple.yaml +255 -0
  48. pyfvs/cfg/species/bt_bigtooth_aspen.yaml +254 -0
  49. pyfvs/cfg/species/bu_buckeye.yaml +252 -0
  50. pyfvs/cfg/species/by_bald_cypress.yaml +255 -0
  51. pyfvs/cfg/species/ca_american_chestnut.yaml +254 -0
  52. pyfvs/cfg/species/cb_cucumber_tree.yaml +254 -0
  53. pyfvs/cfg/species/ck_virginia_pine.yaml +254 -0
  54. pyfvs/cfg/species/co_pond_cypress.yaml +251 -0
  55. pyfvs/cfg/species/ct_catalpa.yaml +251 -0
  56. pyfvs/cfg/species/cw_chestnut_oak.yaml +253 -0
  57. pyfvs/cfg/species/dw_dogwood.yaml +250 -0
  58. pyfvs/cfg/species/el_american_hornbeam.yaml +254 -0
  59. pyfvs/cfg/species/fm_flowering_dogwood.yaml +251 -0
  60. pyfvs/cfg/species/fr_fraser_fir.yaml +247 -0
  61. pyfvs/cfg/species/ga_green_ash.yaml +254 -0
  62. pyfvs/cfg/species/ha_hawthorn.yaml +252 -0
  63. pyfvs/cfg/species/hb_hornbeam.yaml +254 -0
  64. pyfvs/cfg/species/hh_dogwood.yaml +251 -0
  65. pyfvs/cfg/species/hi_hickory_species.yaml +252 -0
  66. pyfvs/cfg/species/hl_holly.yaml +254 -0
  67. pyfvs/cfg/species/hm_eastern_hemlock.yaml +246 -0
  68. pyfvs/cfg/species/hy_holly.yaml +252 -0
  69. pyfvs/cfg/species/ju_eastern_juniper.yaml +247 -0
  70. pyfvs/cfg/species/lb_loblolly_bay.yaml +254 -0
  71. pyfvs/cfg/species/lk_laurel_oak.yaml +254 -0
  72. pyfvs/cfg/species/ll_longleaf_pine.yaml +265 -0
  73. pyfvs/cfg/species/lo_silver_maple.yaml +252 -0
  74. pyfvs/cfg/species/lp_loblolly_pine.yaml +268 -0
  75. pyfvs/cfg/species/mb_mountain_birch.yaml +250 -0
  76. pyfvs/cfg/species/mg_magnolia.yaml +251 -0
  77. pyfvs/cfg/species/ml_maple_leaf.yaml +254 -0
  78. pyfvs/cfg/species/ms_maple_species.yaml +247 -0
  79. pyfvs/cfg/species/mv_magnolia_vine.yaml +254 -0
  80. pyfvs/cfg/species/oh_other_hardwood.yaml +231 -0
  81. pyfvs/cfg/species/os_other_softwood.yaml +232 -0
  82. pyfvs/cfg/species/ot_other_tree.yaml +210 -0
  83. pyfvs/cfg/species/ov_overcup_oak.yaml +254 -0
  84. pyfvs/cfg/species/pc_pond_cypress.yaml +254 -0
  85. pyfvs/cfg/species/pd_pitch_pine.yaml +245 -0
  86. pyfvs/cfg/species/pi_pine_species.yaml +246 -0
  87. pyfvs/cfg/species/po_american_beech.yaml +254 -0
  88. pyfvs/cfg/species/pp_pond_pine.yaml +246 -0
  89. pyfvs/cfg/species/ps_persimmon.yaml +251 -0
  90. pyfvs/cfg/species/pu_pond_pine.yaml +249 -0
  91. pyfvs/cfg/species/qs_flowering_dogwood.yaml +254 -0
  92. pyfvs/cfg/species/ra_red_ash.yaml +245 -0
  93. pyfvs/cfg/species/rd_redbud.yaml +251 -0
  94. pyfvs/cfg/species/rl_red_elm.yaml +240 -0
  95. pyfvs/cfg/species/rm_red_maple.yaml +256 -0
  96. pyfvs/cfg/species/ro_eastern_hemlock.yaml +255 -0
  97. pyfvs/cfg/species/sa_slash_pine.yaml +265 -0
  98. pyfvs/cfg/species/sb_sweet_birch.yaml +255 -0
  99. pyfvs/cfg/species/sd_sand_pine.yaml +251 -0
  100. pyfvs/cfg/species/sk_swamp_oak.yaml +253 -0
  101. pyfvs/cfg/species/sm_sugar_maple.yaml +252 -0
  102. pyfvs/cfg/species/sn_loblolly_pine.yaml +254 -0
  103. pyfvs/cfg/species/so_southern_oak.yaml +253 -0
  104. pyfvs/cfg/species/sp_shortleaf_pine.yaml +267 -0
  105. pyfvs/cfg/species/sr_spruce_pine.yaml +246 -0
  106. pyfvs/cfg/species/ss_basswood.yaml +251 -0
  107. pyfvs/cfg/species/su_sweetgum.yaml +255 -0
  108. pyfvs/cfg/species/sv_silver_maple.yaml +255 -0
  109. pyfvs/cfg/species/sy_sycamore.yaml +254 -0
  110. pyfvs/cfg/species/tm_tamarack.yaml +246 -0
  111. pyfvs/cfg/species/to_tulip_oak.yaml +254 -0
  112. pyfvs/cfg/species/ts_tulip_tree.yaml +253 -0
  113. pyfvs/cfg/species/vp_virginia_pine.yaml +248 -0
  114. pyfvs/cfg/species/wa_white_ash.yaml +254 -0
  115. pyfvs/cfg/species/we_white_elm.yaml +250 -0
  116. pyfvs/cfg/species/wi_willow.yaml +248 -0
  117. pyfvs/cfg/species/wk_water_oak.yaml +254 -0
  118. pyfvs/cfg/species/wn_walnut.yaml +254 -0
  119. pyfvs/cfg/species/wo_white_oak.yaml +256 -0
  120. pyfvs/cfg/species/wp_white_pine.yaml +250 -0
  121. pyfvs/cfg/species/wt_water_tupelo.yaml +254 -0
  122. pyfvs/cfg/species/yp_yellow_poplar.yaml +261 -0
  123. pyfvs/cfg/species_config.yaml +106 -0
  124. pyfvs/clark_profile.py +323 -0
  125. pyfvs/competition.py +332 -0
  126. pyfvs/config_loader.py +375 -0
  127. pyfvs/crown_competition_factor.py +464 -0
  128. pyfvs/crown_ratio.py +377 -0
  129. pyfvs/crown_width.py +512 -0
  130. pyfvs/data_export.py +356 -0
  131. pyfvs/ecological_unit.py +272 -0
  132. pyfvs/exceptions.py +86 -0
  133. pyfvs/fia_integration.py +876 -0
  134. pyfvs/forest_type.py +253 -0
  135. pyfvs/growth_plots.py +579 -0
  136. pyfvs/harvest.py +603 -0
  137. pyfvs/height_diameter.py +248 -0
  138. pyfvs/large_tree_height_growth.py +822 -0
  139. pyfvs/logging_config.py +213 -0
  140. pyfvs/main.py +99 -0
  141. pyfvs/mortality.py +431 -0
  142. pyfvs/parameters.py +121 -0
  143. pyfvs/simulation_engine.py +386 -0
  144. pyfvs/stand.py +1004 -0
  145. pyfvs/stand_metrics.py +436 -0
  146. pyfvs/stand_output.py +552 -0
  147. pyfvs/tree.py +756 -0
  148. pyfvs/validation.py +190 -0
  149. pyfvs/volume_library.py +761 -0
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+ Metadata-Version: 2.4
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+ Name: fvs-python
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+ Version: 0.2.3
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+ Summary: Python implementation of the Forest Vegetation Simulator - Part of the FIA Python Ecosystem
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+ Author-email: Chris Mihiar <chris.mihiar@gmail.com>
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+ Maintainer-email: Chris Mihiar <chris.mihiar@gmail.com>
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+ License: MIT
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+ Project-URL: Homepage, https://fiatools.org/tools/pyfvs/
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+ Project-URL: Repository, https://github.com/mihiarc/pyfvs
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+ Project-URL: Documentation, https://mihiarc.github.io/pyfvs/
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+ Project-URL: Source Code, https://github.com/mihiarc/pyfvs
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+ Project-URL: Bug Tracker, https://github.com/mihiarc/pyfvs/issues
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+ Project-URL: Changelog, https://github.com/mihiarc/pyfvs/releases
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+ Project-URL: FIA Ecosystem, https://fiatools.org
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+ Keywords: fvs,forest-vegetation-simulator,growth-simulation,yield-tables,forestry,southern-pine,loblolly-pine,longleaf-pine,slash-pine,shortleaf-pine,chapman-richards,individual-tree-growth,stand-projection,timber-volume,fia,fiatools,forest-inventory,usda,forest-service
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+ Classifier: Development Status :: 4 - Beta
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+ Classifier: Intended Audience :: Science/Research
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+ Classifier: Intended Audience :: Developers
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+ Classifier: Topic :: Scientific/Engineering
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+ Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
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+ Classifier: Topic :: Scientific/Engineering :: Information Analysis
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+ Classifier: License :: OSI Approved :: MIT License
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+ Classifier: Operating System :: OS Independent
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+ Classifier: Natural Language :: English
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+ Classifier: Environment :: Console
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+ Classifier: Programming Language :: Python :: 3
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+ Classifier: Programming Language :: Python :: 3.9
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+ Classifier: Programming Language :: Python :: 3.10
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+ Classifier: Programming Language :: Python :: 3.11
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+ Classifier: Programming Language :: Python :: 3.12
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+ Requires-Python: >=3.8
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+ Description-Content-Type: text/markdown
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+ License-File: LICENSE
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+ Requires-Dist: numpy>=1.21.0
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+ Requires-Dist: pandas>=1.3.0
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+ Requires-Dist: scipy>=1.7.0
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+ Requires-Dist: matplotlib>=3.4.0
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+ Requires-Dist: seaborn>=0.11.0
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+ Requires-Dist: pyyaml>=6.0.0
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+ Requires-Dist: pydantic>=2.5.0
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+ Requires-Dist: tomli>=2.0.0; python_version < "3.11"
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+ Requires-Dist: tomli-w>=1.0.0
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+ Requires-Dist: tabulate>=0.9.0
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+ Requires-Dist: openpyxl>=3.0.0
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+ Requires-Dist: rich>=12.0.0
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+ Provides-Extra: dev
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+ Requires-Dist: pytest>=6.0.0; extra == "dev"
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+ Requires-Dist: pytest-cov>=3.0.0; extra == "dev"
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+ Requires-Dist: black>=22.0.0; extra == "dev"
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+ Requires-Dist: flake8>=4.0.0; extra == "dev"
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+ Requires-Dist: mypy>=0.900; extra == "dev"
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+ Requires-Dist: pre-commit>=2.15.0; extra == "dev"
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+ Requires-Dist: mkdocs>=1.6.0; extra == "dev"
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+ Requires-Dist: mkdocs-material>=9.5.0; extra == "dev"
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+ Requires-Dist: mkdocstrings[python]>=0.24.0; extra == "dev"
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+ Provides-Extra: test
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+ Requires-Dist: pytest>=6.0.0; extra == "test"
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+ Requires-Dist: pytest-cov>=3.0.0; extra == "test"
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+ Requires-Dist: pytest-xdist>=2.0.0; extra == "test"
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+ Provides-Extra: docs
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+ Requires-Dist: mkdocs>=1.6.0; extra == "docs"
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+ Requires-Dist: mkdocs-material>=9.5.0; extra == "docs"
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+ Requires-Dist: mkdocstrings[python]>=0.24.0; extra == "docs"
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+ Requires-Dist: pymdown-extensions>=10.7; extra == "docs"
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+ Dynamic: license-file
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+
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+ <div align="center">
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+ <a href="https://fiatools.org"><img src="https://fiatools.org/logos/pyfvs_logo.png" alt="pyFVS" width="400"></a>
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+
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+ <p><strong>Forest growth modeling in Python</strong></p>
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+
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+ <p>
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+ <a href="https://fiatools.org"><img src="https://img.shields.io/badge/FIAtools-Ecosystem-2E7D32" alt="FIAtools Ecosystem"></a>
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+ <a href="https://pypi.org/project/pyfvs-fia/"><img src="https://img.shields.io/pypi/v/pyfvs-fia?color=006D6D&label=PyPI" alt="PyPI"></a>
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+ <a href="https://mihiarc.github.io/pyfvs/"><img src="https://img.shields.io/badge/docs-GitHub%20Pages-006D6D" alt="Documentation"></a>
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+ <a href="https://opensource.org/licenses/MIT"><img src="https://img.shields.io/badge/License-MIT-006D6D" alt="License: MIT"></a>
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+ <a href="https://www.python.org/downloads/"><img src="https://img.shields.io/badge/python-3.9+-006D6D" alt="Python 3.9+"></a>
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+ </p>
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+
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+ <p>
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+ <strong>Part of the <a href="https://fiatools.org">FIAtools Python Ecosystem</a></strong><br>
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+ <a href="https://fiatools.org/tools/pyfia/">pyFIA</a> ·
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+ <a href="https://fiatools.org/tools/gridfia/">gridFIA</a> ·
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+ <a href="https://fiatools.org/tools/pyfvs/">pyFVS</a> ·
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+ <a href="https://fiatools.org/tools/askfia/">askFIA</a>
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+ </p>
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+ </div>
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+
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+ ---
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+
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+ A Python implementation of the Forest Vegetation Simulator (FVS) Southern variant. Simulate growth and yield for loblolly, shortleaf, longleaf, and slash pine from age 0 to 50 years.
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+
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+ ## Supported Species
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+
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+ | Code | Species | Scientific Name |
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+ |------|---------|-----------------|
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+ | LP | Loblolly Pine | *Pinus taeda* |
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+ | SP | Shortleaf Pine | *Pinus echinata* |
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+ | LL | Longleaf Pine | *Pinus palustris* |
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+ | SA | Slash Pine | *Pinus elliottii* |
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+
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+ ## Quick Start
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+
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+ ```bash
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+ pip install pyfvs
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+ ```
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+
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+ ```python
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+ from pyfvs import Stand
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+
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+ # Initialize a planted stand
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+ stand = Stand.initialize_planted(
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+ species="LP",
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+ trees_per_acre=500,
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+ site_index=70
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+ )
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+
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+ # Simulate 50 years of growth
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+ stand.grow(years=50)
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+
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+ # Get results
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+ metrics = stand.get_metrics()
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+ print(f"Final volume: {metrics['volume']:.0f} ft³/acre")
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+ ```
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+
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+ ## Growth Models
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+
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+ pyFVS implements individual tree growth models from FVS documentation:
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+
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+ ### Height-Diameter (Curtis-Arney)
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+ ```
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+ height = 4.5 + p2 × exp(-p3 × DBH^p4)
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+ ```
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+
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+ ### Large Tree Diameter Growth
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+ ```
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+ ln(DDS) = β₁ + β₂×ln(DBH) + β₃×DBH² + β₄×ln(CR) + β₅×RH + β₆×SI + ...
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+ ```
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+
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+ ### Small Tree Height Growth (Chapman-Richards)
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+ ```
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+ height = c1 × SI^c2 × (1 - exp(c3 × age))^(c4 × SI^c5)
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+ ```
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+
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+ ## Architecture
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+
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+ ```
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+ Tree Initial State
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+
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+
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+ DBH >= 3.0? ──No──► Small Tree Model
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+ │ │
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+ Yes ▼
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+ │ Height Growth
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+ ▼ │
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+ Large Tree Model ▼
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+ │ Height-Diameter
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+ ▼ │
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+ Predict ln(DDS) ▼
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+ │ Update DBH
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+ ▼ │
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+ Calculate DBH Growth │
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+ │ │
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+ └────────┬───────────┘
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+
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+ Update Crown Ratio
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+
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+
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+ Crown Competition
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+
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+
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+ Updated Tree State
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+ ```
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+
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+ ## Configuration
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+
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+ Species parameters are stored in YAML configuration files:
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+
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+ ```yaml
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+ # cfg/species/lp_loblolly_pine.yaml
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+ species_code: "LP"
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+ common_name: "Loblolly Pine"
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+ height_diameter:
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+ p2: 243.860648
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+ p3: 4.28460566
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+ p4: -0.47130185
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+ bark_ratio:
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+ b1: -0.48140
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+ b2: 0.91413
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+ ```
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+
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+ ## Output
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+
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+ pyFVS generates yield tables with standard forest metrics:
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+
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+ | Age | TPA | QMD | Height | BA | Volume |
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+ |-----|-----|-----|--------|-----|--------|
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+ | 0 | 500 | 0.5 | 1.0 | 0.7 | 0 |
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+ | 10 | 485 | 4.2 | 28.5 | 47.2 | 892 |
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+ | 20 | 420 | 7.8 | 52.1 | 139.8 | 3,241 |
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+ | 30 | 310 | 10.4 | 68.3 | 182.5 | 5,128 |
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+ | ... | ... | ... | ... | ... | ... |
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+
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+ ## Integration with pyFIA
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+
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+ ```python
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+ from pyfia import FIA
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+ from pyfvs import Stand
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+
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+ # Get current stand conditions from FIA
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+ with FIA("database.duckdb") as db:
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+ db.clip_by_state(37)
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+ stand_data = db.get_stand_summary(plot_id="123")
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+
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+ # Initialize pyFVS with FIA data
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+ stand = Stand.from_fia_data(stand_data)
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+ stand.grow(years=30)
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+ ```
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+
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+ ## The FIAtools Ecosystem
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+
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+ pyFVS is part of the [FIAtools Python ecosystem](https://fiatools.org) - a unified suite of open-source tools for forest inventory analysis:
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+
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+ | Tool | Purpose | Key Features |
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+ |------|---------|--------------|
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+ | [**pyFIA**](https://fiatools.org) | Survey & plot data | DuckDB backend, 10-100x faster than EVALIDator |
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+ | [**gridFIA**](https://fiatools.org) | Spatial raster analysis | 327 species at 30m resolution, Zarr storage |
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+ | [**pyFVS**](https://fiatools.org) | Growth simulation | Chapman-Richards curves, yield projections |
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+ | [**askFIA**](https://fiatools.org) | AI interface | Natural language queries for forest data |
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+
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+ **[Explore the full ecosystem at fiatools.org](https://fiatools.org)**
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+
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+ ## References
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+
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+ - [FVS Southern Variant Documentation](https://www.fs.usda.gov/fmsc/fvs/)
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+ - Bechtold & Patterson (2005) "The Enhanced Forest Inventory and Analysis Program"
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+
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+ ## Citation
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+
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+ ```bibtex
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+ @software{pyfvs2025,
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+ title = {pyFVS: Python Implementation of the Forest Vegetation Simulator},
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+ author = {Mihiar, Christopher},
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+ year = {2025},
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+ url = {https://fiatools.org}
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+ }
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+ ```
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+
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+ ---
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+
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+ <div align="center">
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+ <a href="https://fiatools.org"><strong>fiatools.org</strong></a> · Python Ecosystem for Forest Inventory Analysis<br>
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+ <sub>Built by <a href="https://github.com/mihiarc">Chris Mihiar</a> · USDA Forest Service Southern Research Station</sub>
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+ </div>
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+ fvs_python-0.2.3.dist-info/licenses/LICENSE,sha256=xREdKeDxr7V6uqkcnwEw7qiQB2e5XChJtL8LEuw8uMk,1069
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+ pyfvs/__init__.py,sha256=ZBP_9JFzyiNo-7vwCQm-3ZzLSUIlTOLZvV5RAaj2AXg,3743
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+ pyfvs/bark_ratio.py,sha256=ankZILtZBJnCtMT25f79Up1P5Qj132A3_3Pbor4i8jg,9911
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+ pyfvs/clark_profile.py,sha256=j7VG2sntF0PDzaGxh6Zptej3rn9jmsFhCYCyZ6QIuRw,10469
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51
+ pyfvs/cfg/sn_relative_site_index.json,sha256=QyfcSS3Z9a3ZPj04ZV5Y98xFyozuHllL422yXeF9KsM,13294
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+ pyfvs/cfg/sn_small_tree_height_growth.json,sha256=qJtzgaT79_xXO8dnpiGQ9JnGUIyGO1QR-GXXcFd0ETg,18590
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+ pyfvs/cfg/sn_species_codes_table.json,sha256=765fv4KsCmRPu3aEcVyD_1__DH_0779HAZqf6kyz4P4,17729
54
+ pyfvs/cfg/sn_stand_density_index.json,sha256=UDQ6BT_b12jh0hdK7XV97QxRn7NmWk0T_38NiRDIA-c,8770
55
+ pyfvs/cfg/species_config.yaml,sha256=5zoCdwyhAUBv3cYooWKPZpF34f_v-M-EJ834tt80XBk,2592
56
+ pyfvs/cfg/species/ab_american_basswood.yaml,sha256=FceDBTFQDD4_O1yT-IZ56RZY-s2wYnzRzmVSo2aJv3I,4917
57
+ pyfvs/cfg/species/ae_american_elm.yaml,sha256=SwSM0t3BKsBkVyX4VdrvQvRjkWyYtjc_7yFYBURD0HU,4589
58
+ pyfvs/cfg/species/ah_american_hornbeam.yaml,sha256=cFnbGPRnJcghdgcTUZs0DjG7tzayHhENFjBijMaRg9M,4883
59
+ pyfvs/cfg/species/ap_american_plum.yaml,sha256=kLudPXqYgCiiRX4ocLQ63xJJTWygpQaEDKaBiriWYRw,4906
60
+ pyfvs/cfg/species/as_american_sycamore.yaml,sha256=Ds67d2BNfxX1q8WBfrMDZ18zwFRTSqOdMF3c5OiKkQw,4925
61
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62
+ pyfvs/cfg/species/bb_basswood.yaml,sha256=iI6EvEpOTZB712US-AF7jJC8qcN4X3CHEuK1rjM5BDc,4951
63
+ pyfvs/cfg/species/bc_black_cherry.yaml,sha256=YEdbEGOklD2pxjQeFDUvnR2w-q6SauX5Xim28kpoUvg,4958
64
+ pyfvs/cfg/species/bd_sweet_birch.yaml,sha256=8zUdGFwdm9Zu1NHJzXdP5Nic_L0yNdokgGfYURzthBo,4936
65
+ pyfvs/cfg/species/be_american_beech.yaml,sha256=PvUKPFS4XAHnL2iQuQo7YStPvQrs1AlACuaDMNUupqM,4921
66
+ pyfvs/cfg/species/bg_black_gum.yaml,sha256=a50BwdFuG58L0glVvUHJh8camCP1yeozBufdEc1NZSg,4942
67
+ pyfvs/cfg/species/bj_blue_jay.yaml,sha256=ZImAgr225yA0Es9t7NxaOuC0haM3pcvSXT5WXsAYa-4,4965
68
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69
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70
+ pyfvs/cfg/species/bo_red_maple.yaml,sha256=MHYngA-XO2DDEVQ9jAarT7HVXe9A-FCswnY28yWosC4,5003
71
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72
+ pyfvs/cfg/species/bu_buckeye.yaml,sha256=rfKpoIlqLnL1P4G8vQ8DE4PoztyxOiVIv4WxOrDkcB4,4878
73
+ pyfvs/cfg/species/by_bald_cypress.yaml,sha256=aors0Uby4XAec8TYSdZsTw-IHeXacIUC5TcNmPVEQJE,4977
74
+ pyfvs/cfg/species/ca_american_chestnut.yaml,sha256=mOGBl0lsMeK2LwmgrDKX__JVE4Zk4SnqmhgAhYK0Dbo,4942
75
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76
+ pyfvs/cfg/species/ck_virginia_pine.yaml,sha256=661_JLhTrzUzXD0BmlCXyxyBRNDFJzkzOX3TDPmguFs,4974
77
+ pyfvs/cfg/species/co_pond_cypress.yaml,sha256=S0vIdlDyvou6OOasIZtpooY0WCuZGjflfkdxh1lsXjM,4903
78
+ pyfvs/cfg/species/ct_catalpa.yaml,sha256=pfCbdyl9sH67xvsNZOC2uCq-OsTERnpaX2awXGL43YM,4885
79
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80
+ pyfvs/cfg/species/dw_dogwood.yaml,sha256=VbH9j_Y_qCpsaq3CzCUvrfxDAsBtjbRPasONvvCNldU,4875
81
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82
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83
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84
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85
+ pyfvs/cfg/species/ha_hawthorn.yaml,sha256=X9cz44StfRLP7zCoJVhNHdv0NYaMffm2pkm1d4Bx010,4859
86
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88
+ pyfvs/cfg/species/hi_hickory_species.yaml,sha256=mJQhLxFGS_EpdI4B07TvBH6gqXgV8xoUblmJlzGxmZs,4937
89
+ pyfvs/cfg/species/hl_holly.yaml,sha256=IK4o14lWdtd5llsWKX_q0A7Nnu5Fag5K4Gj-pMt_HN0,4940
90
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91
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92
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93
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94
+ pyfvs/cfg/species/lk_laurel_oak.yaml,sha256=_1RKNfaNJxR2DqxADEJpwjXEyaW2x3yn3X3xaptjvdY,4939
95
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96
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97
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98
+ pyfvs/cfg/species/mb_mountain_birch.yaml,sha256=Utn1I0r-XPY-lEn8KFYxLsGQ5cOZmqBz2LS_HoTKfOs,4870
99
+ pyfvs/cfg/species/mg_magnolia.yaml,sha256=atfYlophCWkhtGlYP0PHv7aGCOMg58Jm41n_DfWfkBg,4875
100
+ pyfvs/cfg/species/ml_maple_leaf.yaml,sha256=Y-OGmsrDjhFWNxASbcm-FBO_dJM6DYz-I5e9jbsJQZg,4936
101
+ pyfvs/cfg/species/ms_maple_species.yaml,sha256=oIx1YYVt5WxeZpZIp-ZSZupcglZwhIOTbAJAjwnAj5U,4825
102
+ pyfvs/cfg/species/mv_magnolia_vine.yaml,sha256=IPw_m9n65edWkjlNoqPo3EVDGY6NhAbMnJBS5jL_u8o,4946
103
+ pyfvs/cfg/species/oh_other_hardwood.yaml,sha256=sEBWCIs01EfNuZjbzRaIW4wPBjIZIBlSW6HpSt7GFFU,4399
104
+ pyfvs/cfg/species/os_other_softwood.yaml,sha256=G2MjOxdYewLTIBoG8S2CgSEG6on4Lw6HB28_8P3q81M,4400
105
+ pyfvs/cfg/species/ot_other_tree.yaml,sha256=pd3KE_q7PHyZb_qVUxE2kU6qaCSG2FAxv2hh8O-yzJI,3708
106
+ pyfvs/cfg/species/ov_overcup_oak.yaml,sha256=FvcPW1dUSOgvMowZBnXvweP-ng6nyPP5he7MKt0xWLc,4946
107
+ pyfvs/cfg/species/pc_pond_cypress.yaml,sha256=EsxAZP9t29OxNrQ71PGdLXrr83u4Quwv1il-f0anwSU,4930
108
+ pyfvs/cfg/species/pd_pitch_pine.yaml,sha256=tM-SMGjpipHViYzvyuChzc3DuTngqrrMqEygQgkUSnk,4720
109
+ pyfvs/cfg/species/pi_pine_species.yaml,sha256=UQS4NegrADx6vKKuzCh_GlYFTqdxbOGAF_Cx6kXFj3s,4745
110
+ pyfvs/cfg/species/po_american_beech.yaml,sha256=i_TcDXJlYs3FHoghT2tqrhyUdPUN77ENpkHryBxYl_Y,4966
111
+ pyfvs/cfg/species/pp_pond_pine.yaml,sha256=ThDZ_TiyFb_8EyeZvxtrg1P3I2MO0GlLTdrDZvhvciQ,4758
112
+ pyfvs/cfg/species/ps_persimmon.yaml,sha256=axdIygxGLGw_c6SpyUaPwfvqcEzPG3ujQvNP7g0rTXU,4909
113
+ pyfvs/cfg/species/pu_pond_pine.yaml,sha256=WJ4Wh9TW71OtrBHn5QS74ExwpIhuqWKzFiV--VqEbTE,4830
114
+ pyfvs/cfg/species/qs_flowering_dogwood.yaml,sha256=ItlNxfQLy0fCOjs7cCC6jszNAmIQdP3i87YlhW8En8Q,4936
115
+ pyfvs/cfg/species/ra_red_ash.yaml,sha256=VKV0LuoNoIVnxhq8yGVJpNJLSguVe29Sxt1eckAV0cE,4729
116
+ pyfvs/cfg/species/rd_redbud.yaml,sha256=zS24QQVoNBZzl6KFL025XCyd6GvFRbUeAR_VFpZ8P04,4888
117
+ pyfvs/cfg/species/rl_red_elm.yaml,sha256=zw3HQcu2mMzGwPa5ib7z3FIRNhgDJwF4ExR7XlliOqE,4577
118
+ pyfvs/cfg/species/rm_red_maple.yaml,sha256=9bhMZ_0vz1DlzIPykYVmY8CfUPxzGOwhUIWjiqFQUmo,5016
119
+ pyfvs/cfg/species/ro_eastern_hemlock.yaml,sha256=8h6qZ0oHymbnRv9xnI_Yewpe_RiF-eK9TuIqVjluKLA,4999
120
+ pyfvs/cfg/species/sa_slash_pine.yaml,sha256=e4rGANR7u5X0NMZzG_VfeWbJoVPDCfco3E6qhNIsYKo,5695
121
+ pyfvs/cfg/species/sb_sweet_birch.yaml,sha256=GZQPFVJI9b8eYzk_1z7RkqJKv0GIA62bu00r-7C-LUA,4994
122
+ pyfvs/cfg/species/sd_sand_pine.yaml,sha256=Wx8pCmbG5YaO4Za0a2XW2jSOSLNhMysH5Z2UDVr9R7c,4878
123
+ pyfvs/cfg/species/sk_swamp_oak.yaml,sha256=_4gwrpkcb_Oc6r8sTNlohRlNrAFlBLWpBM7s3Rhqrtk,4947
124
+ pyfvs/cfg/species/sm_sugar_maple.yaml,sha256=v6A6dA8YWAaccu9_H_tgW_bFwckRlV6k-qS2US6lTn0,4927
125
+ pyfvs/cfg/species/sn_loblolly_pine.yaml,sha256=jFUXdnpIFvnoWVfy4lR2XuPVU5sU78HXScPVpskAPd8,4954
126
+ pyfvs/cfg/species/so_southern_oak.yaml,sha256=AFDhpVLv1SY6yunID00g7o5w_1BryWKWLhoiygRP3qU,4939
127
+ pyfvs/cfg/species/sp_shortleaf_pine.yaml,sha256=sc04ory4GnLbrNfGl8gMyFEfk7LVBaeiXitM-6ihz2Y,5796
128
+ pyfvs/cfg/species/sr_spruce_pine.yaml,sha256=F0g46qEmjbaf4kCDUpNSGsm35OCNo4Al-Zu40ZI3leM,4739
129
+ pyfvs/cfg/species/ss_basswood.yaml,sha256=LQwlwVmwv-LXNEFT18sDRWUA1VOob5vGsbH9o-mYCL4,4904
130
+ pyfvs/cfg/species/su_sweetgum.yaml,sha256=Za6129fxAEfnQ-JsmOf8yHc-9Wt-7S7we1_ZnOY4J2U,4996
131
+ pyfvs/cfg/species/sv_silver_maple.yaml,sha256=7ZtDCbKMiw0ReI6h6yXoLqaoX2RM7WQ9_CYGkv0FcGI,5005
132
+ pyfvs/cfg/species/sy_sycamore.yaml,sha256=GQm-FeHrW5MbMC99_jcnuBlxaZ8izfodrSR4uDZmC2w,4980
133
+ pyfvs/cfg/species/tm_tamarack.yaml,sha256=athUrM9p2o6nJ6n8-qo42K_q2WfMGHWiA1tqY-lUX_s,4771
134
+ pyfvs/cfg/species/to_tulip_oak.yaml,sha256=yAu6JnknxUKFUqlE0gkrxFBiHqMzv8WQ-Uw1taEJ8s4,4927
135
+ pyfvs/cfg/species/ts_tulip_tree.yaml,sha256=cKMa7aKhhZ_RKH6jjfG2VrDyIaI58F_UFrDy3wIathA,4918
136
+ pyfvs/cfg/species/vp_virginia_pine.yaml,sha256=6qIPoyGQT8yEHuCEW2Ms770g-ljwC4Swrl6h01OCZNw,4836
137
+ pyfvs/cfg/species/wa_white_ash.yaml,sha256=U8cYgY88eMj2ylO2riyZn9oDyx2Lq2hGlL1b76pbnJI,4975
138
+ pyfvs/cfg/species/we_white_elm.yaml,sha256=rl-_qN3QV5IqqLtPoSoHrkp1RufCiucVzCqtvge1qy8,4866
139
+ pyfvs/cfg/species/wi_willow.yaml,sha256=io_BR1GSHXuec-yfrGYj8TtotkffRymRZpixU1vA0jM,4826
140
+ pyfvs/cfg/species/wk_water_oak.yaml,sha256=3h6GOVD27VP9eRymMX30H4OqkZQLTSgW00mUdBVjRK4,4973
141
+ pyfvs/cfg/species/wn_walnut.yaml,sha256=aohsYSsToYfLvLBf1mjl1kwnjh6gsojaCn5UgzRboaw,4961
142
+ pyfvs/cfg/species/wo_white_oak.yaml,sha256=x_SrAl5ETaiyRqxOUqEptREOKFxvfZc5Qn6mREx7zzU,5028
143
+ pyfvs/cfg/species/wp_white_pine.yaml,sha256=EK8-RAUOHBhgLd-rXI0qcWCCJYrC7JIii038jbbRg9c,4893
144
+ pyfvs/cfg/species/wt_water_tupelo.yaml,sha256=grOG0rp5tbaNdqRyr0SAwnZ62VoTgDELNEyCsmATN1E,4928
145
+ pyfvs/cfg/species/yp_yellow_poplar.yaml,sha256=Iga25G4r8lnetZGMtsD8CqRYvIB_Rs7c4PjvLo0eUh8,5112
146
+ fvs_python-0.2.3.dist-info/METADATA,sha256=H9RxUfFl3F8AjNSo8eDAHhmiM0bfZmcex1PsFqC4uls,8695
147
+ fvs_python-0.2.3.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
148
+ fvs_python-0.2.3.dist-info/top_level.txt,sha256=HoiJYCeyrnAJURntrceFWscRC8yhENTsYpEx2Te1gto,6
149
+ fvs_python-0.2.3.dist-info/RECORD,,
@@ -0,0 +1,5 @@
1
+ Wheel-Version: 1.0
2
+ Generator: setuptools (80.9.0)
3
+ Root-Is-Purelib: true
4
+ Tag: py3-none-any
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+
@@ -0,0 +1,21 @@
1
+ MIT License
2
+
3
+ Copyright (c) 2024 Chris Mihiar
4
+
5
+ Permission is hereby granted, free of charge, to any person obtaining a copy
6
+ of this software and associated documentation files (the "Software"), to deal
7
+ in the Software without restriction, including without limitation the rights
8
+ to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
9
+ copies of the Software, and to permit persons to whom the Software is
10
+ furnished to do so, subject to the following conditions:
11
+
12
+ The above copyright notice and this permission notice shall be included in all
13
+ copies or substantial portions of the Software.
14
+
15
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
16
+ IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
17
+ FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
18
+ AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
19
+ LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
20
+ OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
21
+ SOFTWARE.
@@ -0,0 +1 @@
1
+ pyfvs
pyfvs/__init__.py ADDED
@@ -0,0 +1,107 @@
1
+ """
2
+ PyFVS: Forest Vegetation Simulator for Python
3
+
4
+ A Python implementation of forest growth models based on the
5
+ Forest Vegetation Simulator (FVS) Southern variant.
6
+
7
+ Part of the FIA Python Ecosystem:
8
+ - PyFIA: Survey/plot data analysis (https://github.com/mihiarc/pyfia)
9
+ - GridFIA: Spatial raster analysis (https://github.com/mihiarc/gridfia)
10
+ - PyFVS: Growth/yield simulation (this package)
11
+ - AskFIA: AI conversational interface (https://github.com/mihiarc/askfia)
12
+ """
13
+
14
+ from .stand import Stand
15
+ from .tree import Tree
16
+ from .config_loader import get_config_loader, load_stand_config, load_tree_config
17
+ from .height_diameter import create_height_diameter_model, curtis_arney_height, wykoff_height
18
+ from .crown_ratio import create_crown_ratio_model, calculate_average_crown_ratio, predict_tree_crown_ratio
19
+ from .bark_ratio import create_bark_ratio_model, calculate_dib_from_dob, calculate_bark_ratio
20
+ from .crown_width import create_crown_width_model, calculate_forest_crown_width, calculate_open_crown_width, calculate_ccf_contribution, calculate_hopkins_index
21
+ from .crown_competition_factor import create_ccf_model, calculate_individual_ccf, calculate_stand_ccf, calculate_ccf_from_stand, interpret_ccf
22
+ from .volume_library import (
23
+ VolumeLibrary, VolumeResult, calculate_tree_volume,
24
+ get_volume_library, get_volume_library_info, validate_volume_library
25
+ )
26
+ from .forest_type import (
27
+ ForestTypeClassifier, ForestTypeGroup, ForestTypeResult,
28
+ get_forest_type_effect, classify_forest_type_from_species,
29
+ map_fia_to_fvs, get_forest_type_group_info
30
+ )
31
+ from .ecological_unit import (
32
+ EcologicalUnitClassifier, get_ecounit_effect, select_ecounit_table,
33
+ create_classifier as create_ecounit_classifier, get_ecounit_summary,
34
+ MOUNTAIN_PROVINCE_ECOUNITS, LOWLAND_ECOUNITS
35
+ )
36
+ from .fia_integration import (
37
+ FIASpeciesMapper, FIATreeRecord, FIAPlotData,
38
+ validate_fia_input, transform_fia_trees, select_condition,
39
+ derive_site_index, derive_forest_type, derive_ecounit,
40
+ derive_stand_age, create_trees_from_fia
41
+ )
42
+ from .main import main
43
+
44
+ __version__ = "0.2.3"
45
+ __author__ = "PyFVS Development Team"
46
+
47
+ __all__ = [
48
+ "Stand",
49
+ "Tree",
50
+ "get_config_loader",
51
+ "load_stand_config",
52
+ "load_tree_config",
53
+ "create_height_diameter_model",
54
+ "curtis_arney_height",
55
+ "wykoff_height",
56
+ "create_crown_ratio_model",
57
+ "calculate_average_crown_ratio",
58
+ "predict_tree_crown_ratio",
59
+ "create_bark_ratio_model",
60
+ "calculate_dib_from_dob",
61
+ "calculate_bark_ratio",
62
+ "create_crown_width_model",
63
+ "calculate_forest_crown_width",
64
+ "calculate_open_crown_width",
65
+ "calculate_ccf_contribution",
66
+ "calculate_hopkins_index",
67
+ "create_ccf_model",
68
+ "calculate_individual_ccf",
69
+ "calculate_stand_ccf",
70
+ "calculate_ccf_from_stand",
71
+ "interpret_ccf",
72
+ "VolumeLibrary",
73
+ "VolumeResult",
74
+ "calculate_tree_volume",
75
+ "get_volume_library",
76
+ "get_volume_library_info",
77
+ "validate_volume_library",
78
+ # Forest Type Classification
79
+ "ForestTypeClassifier",
80
+ "ForestTypeGroup",
81
+ "ForestTypeResult",
82
+ "get_forest_type_effect",
83
+ "classify_forest_type_from_species",
84
+ "map_fia_to_fvs",
85
+ "get_forest_type_group_info",
86
+ # Ecological Unit Classification
87
+ "EcologicalUnitClassifier",
88
+ "get_ecounit_effect",
89
+ "select_ecounit_table",
90
+ "create_ecounit_classifier",
91
+ "get_ecounit_summary",
92
+ "MOUNTAIN_PROVINCE_ECOUNITS",
93
+ "LOWLAND_ECOUNITS",
94
+ # FIA Integration
95
+ "FIASpeciesMapper",
96
+ "FIATreeRecord",
97
+ "FIAPlotData",
98
+ "validate_fia_input",
99
+ "transform_fia_trees",
100
+ "select_condition",
101
+ "derive_site_index",
102
+ "derive_forest_type",
103
+ "derive_ecounit",
104
+ "derive_stand_age",
105
+ "create_trees_from_fia",
106
+ "main"
107
+ ]