fractal-server 2.9.0a1__py3-none-any.whl → 2.9.0a3__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- fractal_server/__init__.py +1 -1
- fractal_server/app/models/v2/task_group.py +4 -0
- fractal_server/app/routes/api/v2/submit.py +17 -3
- fractal_server/app/routes/api/v2/task_collection.py +3 -10
- fractal_server/app/routes/api/v2/task_group_lifecycle.py +50 -6
- fractal_server/app/schemas/_validators.py +0 -14
- fractal_server/app/schemas/v1/applyworkflow.py +0 -8
- fractal_server/app/schemas/v1/dataset.py +0 -5
- fractal_server/app/schemas/v1/project.py +0 -5
- fractal_server/app/schemas/v1/state.py +0 -5
- fractal_server/app/schemas/v1/workflow.py +0 -5
- fractal_server/app/schemas/v2/dataset.py +0 -6
- fractal_server/app/schemas/v2/job.py +0 -8
- fractal_server/app/schemas/v2/project.py +0 -5
- fractal_server/app/schemas/v2/task_group.py +1 -0
- fractal_server/app/schemas/v2/workflow.py +0 -5
- fractal_server/migrations/versions/3082479ac4ea_taskgroup_activity_and_venv_info_to_.py +8 -0
- fractal_server/ssh/_fabric.py +53 -18
- fractal_server/tasks/v2/local/{utils_local.py → _utils.py} +25 -0
- fractal_server/tasks/v2/local/collect.py +2 -2
- fractal_server/tasks/v2/local/deactivate.py +1 -1
- fractal_server/tasks/v2/local/reactivate.py +1 -1
- fractal_server/tasks/v2/ssh/__init__.py +3 -0
- fractal_server/tasks/v2/ssh/_utils.py +87 -0
- fractal_server/tasks/v2/ssh/collect.py +3 -78
- fractal_server/tasks/v2/ssh/deactivate.py +243 -2
- fractal_server/tasks/v2/ssh/reactivate.py +199 -2
- fractal_server/tasks/v2/utils_background.py +0 -24
- fractal_server/zip_tools.py +21 -4
- {fractal_server-2.9.0a1.dist-info → fractal_server-2.9.0a3.dist-info}/METADATA +1 -1
- {fractal_server-2.9.0a1.dist-info → fractal_server-2.9.0a3.dist-info}/RECORD +34 -33
- {fractal_server-2.9.0a1.dist-info → fractal_server-2.9.0a3.dist-info}/LICENSE +0 -0
- {fractal_server-2.9.0a1.dist-info → fractal_server-2.9.0a3.dist-info}/WHEEL +0 -0
- {fractal_server-2.9.0a1.dist-info → fractal_server-2.9.0a3.dist-info}/entry_points.txt +0 -0
fractal_server/zip_tools.py
CHANGED
@@ -122,9 +122,26 @@ def _zip_folder_to_file_and_remove(folder: str) -> None:
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3. Checks if the folder can be safely deleted using the
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`_folder_can_be_deleted` function. If so, deletes the original folder.
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"""
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-
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-
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+
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tmp_zipfile = f"{folder}_tmp.zip"
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zipfile = f"{folder}.zip"
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try:
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logger.info(f"Start creating temporary zip file at '{tmp_zipfile}'.")
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_create_zip(folder, tmp_zipfile)
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logger.info("Zip file created.")
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except Exception as e:
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logger.error(
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f"Error while creating temporary zip file. Original error: '{e}'."
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)
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Path(tmp_zipfile).unlink(missing_ok=True)
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return
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logger.info(f"Moving temporary zip file to {zipfile}.")
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shutil.move(tmp_zipfile, zipfile)
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logger.info("Zip file moved.")
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+
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if _folder_can_be_deleted(folder):
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logger.info(f"
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logger.info(f"Removing folder '{folder}'.")
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shutil.rmtree(folder)
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logger.info(
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logger.info("Folder removed.")
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@@ -1,4 +1,4 @@
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-
fractal_server/__init__.py,sha256=
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fractal_server/__init__.py,sha256=8LdiYD77VYwRKrVoavHTgYHkexYzgn-F5OpNKKf-WMU,24
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fractal_server/__main__.py,sha256=dEkCfzLLQrIlxsGC-HBfoR-RBMWnJDgNrxYTyzmE9c0,6146
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fractal_server/alembic.ini,sha256=MWwi7GzjzawI9cCAK1LW7NxIBQDUqD12-ptJoq5JpP0,3153
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fractal_server/app/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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@@ -20,7 +20,7 @@ fractal_server/app/models/v2/dataset.py,sha256=-7sxHEw4IIAvF_uSan7tA3o8hvoakBkQ0
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fractal_server/app/models/v2/job.py,sha256=ypJmN-qspkKBGhBG7Mt-HypSQqcQ2EmB4Bzzb2-y550,1535
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fractal_server/app/models/v2/project.py,sha256=rAHoh5KfYwIaW7rTX0_O0jvWmxEvfo1BafvmcXuSSRk,786
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fractal_server/app/models/v2/task.py,sha256=jebD28Pz8tGcsWCItxj6uKjcD8BMMnnU8dqYhvhEB6c,1520
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fractal_server/app/models/v2/task_group.py,sha256=
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fractal_server/app/models/v2/task_group.py,sha256=Lxtwxk6pfffM8IehqkFvhDuecSXnXqTWeUlf7Y78oss,3254
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fractal_server/app/models/v2/workflow.py,sha256=YBgFGCziUgU0aJ5EM3Svu9W2c46AewZO9VBlFCHiSps,1069
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fractal_server/app/models/v2/workflowtask.py,sha256=iDuJYk8kp4PNqGmbKRtGI7y-QsbjkNd_gDsbMzL4i-g,1274
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fractal_server/app/routes/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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@@ -50,12 +50,12 @@ fractal_server/app/routes/api/v2/images.py,sha256=JR1rR6qEs81nacjriOXAOBQjAbCXF4
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fractal_server/app/routes/api/v2/job.py,sha256=Bga2Kz1OjvDIdxZObWaaXVhNIhC_5JKhKRjEH2_ayEE,5157
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fractal_server/app/routes/api/v2/project.py,sha256=eWYFJ7F2ZYQcpi-_n-rhPF-Q4gJhzYBsVGYFhHZZXAE,6653
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fractal_server/app/routes/api/v2/status.py,sha256=6N9DSZ4iFqbZImorWfEAPoyoFUgEruo4Hweqo0x0xXU,6435
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fractal_server/app/routes/api/v2/submit.py,sha256=
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fractal_server/app/routes/api/v2/submit.py,sha256=jqYix7X6dUJn8w6RWasu1lOFf7T_CcXQlpVY38njE24,8688
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fractal_server/app/routes/api/v2/task.py,sha256=K0ik33t7vL8BAK5S7fqyJDNdRK4stGqb_73bSa8tvPE,7159
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fractal_server/app/routes/api/v2/task_collection.py,sha256
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fractal_server/app/routes/api/v2/task_collection.py,sha256=_K7c-83jpmaLz1gXM_MbndskkmV6oo_ivg0mWP6hfvs,9621
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fractal_server/app/routes/api/v2/task_collection_custom.py,sha256=cctW61-C2QYF2KXluS15lLhZJS_kt30Ca6UGLFO32z0,6207
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fractal_server/app/routes/api/v2/task_group.py,sha256=Ove7Vr3p8GKtskHANAZh8TWwOw8dfbFCN2UQFv6DhqM,8136
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fractal_server/app/routes/api/v2/task_group_lifecycle.py,sha256=
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fractal_server/app/routes/api/v2/task_group_lifecycle.py,sha256=SPUB-QHvADaJm3zyuPIyCg-TqbHujwiwr7RauvYGXJ0,8972
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fractal_server/app/routes/api/v2/workflow.py,sha256=vjCNRzMHaAB4YWbAEWGlELHXDN4GjtE26IkIiB15RGM,8682
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fractal_server/app/routes/api/v2/workflow_import.py,sha256=WJST1AZypvOTGUrjhomYVh4R2ow8RoGpuwzNiq81Pzc,10971
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fractal_server/app/routes/api/v2/workflowtask.py,sha256=ciHTwXXFiFnMF7ZpJ3Xs0q6YfuZrFvIjqndlzAEdZpo,6969
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@@ -134,31 +134,31 @@ fractal_server/app/runner/v2/runner_functions_low_level.py,sha256=1fWvQ6YZUUnDhO
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fractal_server/app/runner/v2/task_interface.py,sha256=hT3p-bRGsLNAR_dNv_PYFoqzIF_EQtSsGwl38j1haYA,1824
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fractal_server/app/runner/versions.py,sha256=dSaPRWqmFPHjg20kTCHmi_dmGNcCETflDtDLronNanU,852
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fractal_server/app/schemas/__init__.py,sha256=stURAU_t3AOBaH0HSUbV-GKhlPKngnnIMoqWc3orFyI,135
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fractal_server/app/schemas/_validators.py,sha256=
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fractal_server/app/schemas/_validators.py,sha256=T5EswIJAJRvawfzqWtPcN2INAfiBXyE4m0iwQm4ht-0,3149
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fractal_server/app/schemas/user.py,sha256=aUD8YAcfYTEO06TEUoTx4heVrXFiX7E2Mb8D2--4FsA,2130
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fractal_server/app/schemas/user_group.py,sha256=YwJvYgj-PI66LWy38CEd_FIZPsBV1_2N5zJPGFcFvBw,2143
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fractal_server/app/schemas/user_settings.py,sha256=TalISeEfCrtN8LgqbLx1Q8ZPoeiZnbksg5NYAVzkIqY,3527
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fractal_server/app/schemas/v1/__init__.py,sha256=CrBGgBhoemCvmZ70ZUchM-jfVAICnoa7AjZBAtL2UB0,1852
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fractal_server/app/schemas/v1/applyworkflow.py,sha256=
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fractal_server/app/schemas/v1/dataset.py,sha256=
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fractal_server/app/schemas/v1/applyworkflow.py,sha256=dYArxQAOBdUIEXX_Ejz8b9fBhEYu1nMm6b_Z6_P6TgA,4052
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fractal_server/app/schemas/v1/dataset.py,sha256=DWFCxZjApcKt2M6UJMK0tmejXwUT09vjUULf2D7Y-f0,3293
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fractal_server/app/schemas/v1/dumps.py,sha256=67VXnyLh_0Ufo7rPM2jZ9P9rk0CnYcVAkilx_cLX6sg,1274
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fractal_server/app/schemas/v1/manifest.py,sha256=Yht7guhs0Pcl2U0RMOCbI_UHBZ9YO_YU0H8hxACx3TY,3829
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fractal_server/app/schemas/v1/project.py,sha256=
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fractal_server/app/schemas/v1/state.py,sha256=
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fractal_server/app/schemas/v1/project.py,sha256=Zxd-AguQQG9z2CfJ_sJh5SB9WcHPFbWpLgP_AhjOyZs,1067
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fractal_server/app/schemas/v1/state.py,sha256=tBXzp_qW2TNNNPBo-AWEaffEU-1GkMBtUoaMgiN_EL0,302
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fractal_server/app/schemas/v1/task.py,sha256=7BxOZ_qoRQ8n3YbQpDvB7VMcxB5fSYQmR5RLIWhuJ5U,3704
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fractal_server/app/schemas/v1/task_collection.py,sha256=uvq9bcMaGD_qHsh7YtcpoSAkVAbw12eY4DocIO3MKOg,3057
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fractal_server/app/schemas/v1/workflow.py,sha256=
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fractal_server/app/schemas/v1/workflow.py,sha256=oRKamLSuAgrTcv3gMMxGcotDloLL2c3NNgPA39UEmmM,4467
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fractal_server/app/schemas/v2/__init__.py,sha256=dzDsAzLLMgyQBa3b64n71K1u83tbBn9_Oloaqqv1tjA,2444
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fractal_server/app/schemas/v2/dataset.py,sha256=
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fractal_server/app/schemas/v2/dataset.py,sha256=zRlcO0wDZahTW1PINdVEuARZ7GZUuEqqop7UdE3-5do,2470
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fractal_server/app/schemas/v2/dumps.py,sha256=s6dg-pHZFui6t2Ktm0SMxjKDN-v-ZqBHz9iTsBQF3eU,1712
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fractal_server/app/schemas/v2/job.py,sha256=
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fractal_server/app/schemas/v2/job.py,sha256=42V-bFfMvysRplwTKGsL_WshAVsWSM6yjFqypxwrY3k,3020
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fractal_server/app/schemas/v2/manifest.py,sha256=Uqtd7DbyOkf9bxBOKkU7Sv7nToBIFGUcfjY7rd5iO7c,6981
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fractal_server/app/schemas/v2/project.py,sha256=
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fractal_server/app/schemas/v2/project.py,sha256=ABv9LSLVCq1QYthEhBvZOTn_4DFEC-7cH28tFGFdM7I,589
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fractal_server/app/schemas/v2/status.py,sha256=SQaUpQkjFq5c5k5J4rOjNhuQaDOEg8lksPhkKmPU5VU,332
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fractal_server/app/schemas/v2/task.py,sha256=FFAbYwDlqowB8gVMdjFVPVHvAM0T89PYLixUth49xfQ,6870
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fractal_server/app/schemas/v2/task_collection.py,sha256=yHpCRxoj6tKqCiQfUjaTj8SfCn1ChD_P6okfEOzyUDE,6518
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fractal_server/app/schemas/v2/workflow.py,sha256
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fractal_server/app/schemas/v2/task_group.py,sha256=e4NwFuOmiO0afoZLVsI_XHIpD_o_QWDpzlI7ZoNAYwo,3014
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fractal_server/app/schemas/v2/workflow.py,sha256=-KWvXnbHBFA3pj5n7mfSyLKJQSqkJmoziIEe7mpLl3M,1875
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fractal_server/app/schemas/v2/workflowtask.py,sha256=vDdMktYbHeYBgB5OuWSv6wRPRXWqvetkeqQ7IC5YtfA,5751
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fractal_server/app/security/__init__.py,sha256=8Xd4GxumZgvxEH1Vli3ULehwdesEPiaAbtffJvAEgNo,12509
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fractal_server/app/user_settings.py,sha256=aZgQ3i0JkHfgwLGW1ee6Gzr1ae3IioFfJKKSsSS8Svk,1312
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@@ -178,7 +178,7 @@ fractal_server/migrations/script.py.mako,sha256=oMXw9LC3zRbinWWPPDgeZ4z9FJrV2zhR
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fractal_server/migrations/versions/034a469ec2eb_task_groups.py,sha256=vrPhC8hfFu1c4HmLHNZyCuqEfecFD8-bWc49bXMNes0,6199
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fractal_server/migrations/versions/091b01f51f88_add_usergroup_and_linkusergroup_table.py,sha256=-BSS9AFTPcu3gYC-sYbawSy4MWQQx8TfMb5BW5EBKmQ,1450
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fractal_server/migrations/versions/19eca0dd47a9_user_settings_project_dir.py,sha256=Q1Gj1cJ0UrdLBJ5AXfFK9QpxTtmcv-4Z3NEGDnxOme4,961
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fractal_server/migrations/versions/3082479ac4ea_taskgroup_activity_and_venv_info_to_.py,sha256=
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fractal_server/migrations/versions/3082479ac4ea_taskgroup_activity_and_venv_info_to_.py,sha256=_wy9Yu2YfhpBffUsboAG9junlQ2jRR7qui9wbLvXp7w,3653
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fractal_server/migrations/versions/4c308bcaea2b_add_task_args_schema_and_task_args_.py,sha256=-wHe-fOffmYeAm0JXVl_lxZ7hhDkaEVqxgxpHkb_uL8,954
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fractal_server/migrations/versions/4cedeb448a53_workflowtask_foreign_keys_not_nullables.py,sha256=Mob8McGYAcmgvrseyyYOa54E6Gsgr-4SiGdC-r9O4_A,1157
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fractal_server/migrations/versions/501961cfcd85_remove_link_between_v1_and_v2_tasks_.py,sha256=5ROUgcoZOdjf8kMt6cxuvPhzHmV6xaCxvZEbhUEyZM4,3271
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fractal_server/migrations/versions/f384e1c0cf5d_drop_task_default_args_columns.py,sha256=9BwqUS9Gf7UW_KjrzHbtViC880qhD452KAytkHWWZyk,746
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fractal_server/py.typed,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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fractal_server/ssh/__init__.py,sha256=sVUmzxf7_DuXG1xoLQ1_00fo5NPhi2LJipSmU5EAkPs,124
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fractal_server/ssh/_fabric.py,sha256=
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fractal_server/ssh/_fabric.py,sha256=O1Dxl6xlg9pvqdKyKqy18mYQlslJoJHapXtDMCzZcBA,21711
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fractal_server/string_tools.py,sha256=XtMNsr5R7GmgzmFi68zkKMedHs8vjGoVMMCXqWhIk9k,2568
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fractal_server/syringe.py,sha256=3qSMW3YaMKKnLdgnooAINOPxnCOxP7y2jeAQYB21Gdo,2786
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fractal_server/tasks/__init__.py,sha256=kadmVUoIghl8s190_Tt-8f-WBqMi8u8oU4Pvw39NHE8,23
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fractal_server/tasks/v1/utils.py,sha256=HYFyNAyZofmf--mVgdwGC5TJpGShIWIDaS01yRr4HxM,1771
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fractal_server/tasks/v2/local/__init__.py,sha256=9RVItnS7OyLsJOuJjWMCicaky4ASUPQEYD4SzDs0hOE,141
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fractal_server/tasks/v2/local/_utils.py,sha256=EvhmVwYjqaNyDCUMEsTWYOUXLgEwR1xr6bu32apCEI8,2491
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fractal_server/tasks/v2/local/collect.py,sha256=BbXSgxExPUxFxcmBs3ejwWzRae-sQgfbk3zZkAQg77Y,12190
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fractal_server/tasks/v2/local/reactivate.py,sha256=R3rArAzUpMGf6xa3dGVwwXHW9WVDi5ia28AFisZsqNc,6112
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fractal_server/tasks/v2/ssh/__init__.py,sha256=aSQbVi6Ummt9QzcSLWNmSqYjfdxrn9ROmqgH6bDpI7k,135
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fractal_server/tasks/v2/ssh/_utils.py,sha256=2E-F_862zM6FZA-im-E8t8kjptWRIhBj1IDHC6QD1H8,2818
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fractal_server/tasks/v2/ssh/collect.py,sha256=U8f6-dgtAI9Pr-gWPeDMeYdOkxYSqfsrYcSPDYEqz4I,12942
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fractal_server/tasks/v2/ssh/deactivate.py,sha256=YNJEcUPNuQ7H3I9EtWn84es2AY9Dnij388w6PQra4wc,10186
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fractal_server/tasks/v2/ssh/reactivate.py,sha256=brIa3XuoD7g9m9vIB7CSgog6KC9w8e45phLT-vSSXlI,7754
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fractal_server/tasks/v2/templates/1_create_venv.sh,sha256=PK0jdHKtQpda1zULebBaVPORt4t6V17wa4N1ohcj5ac,548
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fractal_server/tasks/v2/templates/2_pip_install.sh,sha256=RDDfbFnGOK3aRuHyXqDOUNCGullzAr0zS7BFqG1CJeE,1720
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fractal_server/tasks/v2/templates/3_pip_freeze.sh,sha256=JldREScEBI4cD_qjfX4UK7V4aI-FnX9ZvVNxgpSOBFc,168
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fractal_server/tasks/v2/templates/4_pip_show.sh,sha256=84NGHlg6JIbrQktgGKyfGsggPFzy6RBJuOmIpPUhsrw,1747
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fractal_server/tasks/v2/templates/5_get_venv_size_and_file_number.sh,sha256=q-6ZUvA6w6FDVEoSd9O63LaJ9tKZc7qAFH72SGPrd_k,284
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fractal_server/tasks/v2/templates/6_pip_install_from_freeze.sh,sha256=n9C8w76YraLbeTe7NhuLzvAQiJCm_akL3Mc3EMfxrHo,1007
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fractal_server/tasks/v2/utils_background.py,sha256=
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fractal_server/tasks/v2/utils_background.py,sha256=tikXhggqxdU7EnKdx2co3UwinlDazEjfOPQOXtO58zs,4240
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fractal_server/tasks/v2/utils_database.py,sha256=6r56yyFPnEBrXl6ncmO6D76znzISQCFZqCYcD-Ummd4,1213
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fractal_server/tasks/v2/utils_package_names.py,sha256=RDg__xrvQs4ieeVzmVdMcEh95vGQYrv9Hfal-5EDBM8,2393
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fractal_server/tasks/v2/utils_python_interpreter.py,sha256=-EWh3Y3VqHLDOWUO_wG_wknqmGqKAD0O2KTLhNjrZaI,948
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fractal_server/tasks/v2/utils_templates.py,sha256=C5WLuY3uGG2s53OEL-__H35-fmSlguwZx836BPFHBpE,2732
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fractal_server/urls.py,sha256=5o_qq7PzKKbwq12NHSQZDmDitn5RAOeQ4xufu-2v9Zk,448
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fractal_server/utils.py,sha256=utvmBx8K9I8hRWFquxna2pBaOqe0JifDL_NVPmihEJI,3525
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fractal_server/zip_tools.py,sha256=
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fractal_server/zip_tools.py,sha256=GjDgo_sf6V_DDg6wWeBlZu5zypIxycn_l257p_YVKGc,4876
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fractal_server-2.9.0a3.dist-info/LICENSE,sha256=QKAharUuhxL58kSoLizKJeZE3mTCBnX6ucmz8W0lxlk,1576
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fractal_server-2.9.0a3.dist-info/METADATA,sha256=W92NgqXaqh1eO8X_o9XPN8chROYn0ZyszQCjkBo_BIg,4585
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fractal_server-2.9.0a3.dist-info/WHEEL,sha256=sP946D7jFCHeNz5Iq4fL4Lu-PrWrFsgfLXbbkciIZwg,88
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fractal_server-2.9.0a3.dist-info/entry_points.txt,sha256=8tV2kynvFkjnhbtDnxAqImL6HMVKsopgGfew0DOp5UY,58
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fractal_server-2.9.0a3.dist-info/RECORD,,
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