fractal-server 2.17.1a1__py3-none-any.whl → 2.17.2__py3-none-any.whl

fractal_server/migrations/versions/0f5f85bb2ae7_add_pre_pinned_packages.py

@@ -5,6 +5,7 @@ Revises: 1a83a5260664
 Create Date: 2025-09-10 14:36:06.028179
 
 """
+
 import sqlalchemy as sa
 from alembic import op
 from sqlalchemy.dialects import postgresql

fractal_server/migrations/versions/19eca0dd47a9_user_settings_project_dir.py

@@ -5,11 +5,11 @@ Revises: 8e8f227a3e36
 Create Date: 2024-10-30 14:34:28.219355
 
 """
+
 import sqlalchemy as sa
 import sqlmodel
 from alembic import op
 
-
 # revision identifiers, used by Alembic.
 revision = "19eca0dd47a9"
 down_revision = "8e8f227a3e36"

fractal_server/migrations/versions/1a83a5260664_rename.py

@@ -5,8 +5,8 @@ Revises: b3ffb095f973
 Create Date: 2025-09-10 14:16:51.202765
 
 """
-from alembic import op
 
+from alembic import op
 
 # revision identifiers, used by Alembic.
 revision = "1a83a5260664"

fractal_server/migrations/versions/1eac13a26c83_drop_v1_tables.py

@@ -5,6 +5,7 @@ Revises: af8673379a5c
 Create Date: 2025-01-10 13:17:47.838607
 
 """
+
 import logging
 
 from alembic import op

fractal_server/migrations/versions/316140ff7ee1_remove_usersettings_cache_dir.py

@@ -5,10 +5,10 @@ Revises: d256a7379ab8
 Create Date: 2024-12-03 10:15:53.255958
 
 """
+
 import sqlalchemy as sa
 from alembic import op
 
-
 # revision identifiers, used by Alembic.
 revision = "316140ff7ee1"
 down_revision = "d256a7379ab8"

fractal_server/migrations/versions/40d6d6511b20_add_index_to_history_models.py

@@ -0,0 +1,47 @@
+"""add index to history models
+
+Revision ID: 40d6d6511b20
+Revises: 7673fe18c05d
+Create Date: 2025-11-14 10:34:12.300920
+
+"""
+
+from alembic import op
+
+# revision identifiers, used by Alembic.
+revision = "40d6d6511b20"
+down_revision = "7673fe18c05d"
+branch_labels = None
+depends_on = None
+
+
+def upgrade() -> None:
+    # ### commands auto generated by Alembic - please adjust! ###
+    with op.batch_alter_table("historyimagecache", schema=None) as batch_op:
+        batch_op.create_index(
+            batch_op.f("ix_historyimagecache_latest_history_unit_id"),
+            ["latest_history_unit_id"],
+            unique=False,
+        )
+
+    with op.batch_alter_table("historyunit", schema=None) as batch_op:
+        batch_op.create_index(
+            batch_op.f("ix_historyunit_history_run_id"),
+            ["history_run_id"],
+            unique=False,
+        )
+
+    # ### end Alembic commands ###
+
+
+def downgrade() -> None:
+    # ### commands auto generated by Alembic - please adjust! ###
+    with op.batch_alter_table("historyunit", schema=None) as batch_op:
+        batch_op.drop_index(batch_op.f("ix_historyunit_history_run_id"))
+
+    with op.batch_alter_table("historyimagecache", schema=None) as batch_op:
+        batch_op.drop_index(
+            batch_op.f("ix_historyimagecache_latest_history_unit_id")
+        )
+
+    # ### end Alembic commands ###

fractal_server/migrations/versions/45fbb391d7af_make_resource_id_fk_non_nullable.py

@@ -5,10 +5,10 @@ Revises: caba9fb1ea5e
 Create Date: 2025-11-11 16:39:12.813766
 
 """
+
 import sqlalchemy as sa
 from alembic import op
 
-
 # revision identifiers, used by Alembic.
 revision = "45fbb391d7af"
 down_revision = "caba9fb1ea5e"

fractal_server/migrations/versions/47351f8c7ebc_drop_dataset_filters.py

@@ -5,6 +5,7 @@ Revises: fbce16ff4e47
 Create Date: 2025-03-26 11:10:17.869028
 
 """
+
 import sqlalchemy as sa
 from alembic import op
 from sqlalchemy.dialects import postgresql

fractal_server/migrations/versions/49d0856e9569_drop_table.py

@@ -5,6 +5,7 @@ Revises: 45fbb391d7af
 Create Date: 2025-11-11 16:39:41.497832
 
 """
+
 import sqlalchemy as sa
 from alembic import op
 from sqlalchemy.dialects import postgresql
@@ -34,9 +35,7 @@ def downgrade() -> None:
             autoincrement=False,
             nullable=False,
         ),
-        sa.Column(
-            "ssh_host", sa.VARCHAR(), autoincrement=False, nullable=True
-        ),
+        sa.Column("ssh_host", sa.VARCHAR(), autoincrement=False, nullable=True),
         sa.Column(
             "ssh_username", sa.VARCHAR(), autoincrement=False, nullable=True
         ),

fractal_server/migrations/versions/4c308bcaea2b_add_task_args_schema_and_task_args_.py

@@ -5,11 +5,11 @@ Revises: 50a13d6138fd
 Create Date: 2023-05-29 17:09:02.492639
 
 """
+
 import sqlalchemy as sa
 import sqlmodel
 from alembic import op
 
-
 # revision identifiers, used by Alembic.
 revision = "4c308bcaea2b"
 down_revision = "50a13d6138fd"

fractal_server/migrations/versions/4cedeb448a53_workflowtask_foreign_keys_not_nullables.py

@@ -5,10 +5,10 @@ Revises: efa89c30e0a4
 Create Date: 2024-01-16 13:57:47.891931
 
 """
+
 import sqlalchemy as sa
 from alembic import op
 
-
 # revision identifiers, used by Alembic.
 revision = "4cedeb448a53"
 down_revision = "efa89c30e0a4"

fractal_server/migrations/versions/501961cfcd85_remove_link_between_v1_and_v2_tasks_.py

@@ -5,6 +5,7 @@ Revises: 5bf02391cfef
 Create Date: 2024-09-09 14:15:34.415926
 
 """
+
 import sqlalchemy as sa
 from alembic import op
 
@@ -36,8 +37,8 @@ def upgrade() -> None:
     # NOTE: in sqlite, the `drop_index` command fails if the existing table
     # has zero rows, while it succeeds if there are already some rows
     if op.get_bind().dialect.name == "sqlite":
-        import sqlite3
         import logging
+        import sqlite3
 
         logger = logging.getLogger("alembic.runtime.migration")
         logger.warning(

fractal_server/migrations/versions/50a13d6138fd_initial_schema.py

@@ -5,11 +5,11 @@ Revises:
 Create Date: 2023-05-29 12:14:56.670243
 
 """
+
 import sqlalchemy as sa
 import sqlmodel
 from alembic import op
 
-
 # revision identifiers, used by Alembic.
 revision = "50a13d6138fd"
 down_revision = None
@@ -37,9 +37,7 @@ def upgrade() -> None:
         "task",
         sa.Column("default_args", sa.JSON(), nullable=True),
         sa.Column("meta", sa.JSON(), nullable=True),
-        sa.Column(
-            "source", sqlmodel.sql.sqltypes.AutoString(), nullable=False
-        ),
+        sa.Column("source", sqlmodel.sql.sqltypes.AutoString(), nullable=False),
         sa.Column("id", sa.Integer(), nullable=False),
         sa.Column("name", sqlmodel.sql.sqltypes.AutoString(), nullable=False),
         sa.Column(
@@ -52,9 +50,7 @@ def upgrade() -> None:
             "output_type", sqlmodel.sql.sqltypes.AutoString(), nullable=False
         ),
         sa.Column("owner", sqlmodel.sql.sqltypes.AutoString(), nullable=True),
-        sa.Column(
-            "version", sqlmodel.sql.sqltypes.AutoString(), nullable=True
-        ),
+        sa.Column("version", sqlmodel.sql.sqltypes.AutoString(), nullable=True),
         sa.PrimaryKeyConstraint("id"),
         sa.UniqueConstraint("source"),
     )
@@ -163,9 +159,7 @@ def upgrade() -> None:
     )
     op.create_table(
         "applyworkflow",
-        sa.Column(
-            "start_timestamp", sa.DateTime(timezone=True), nullable=True
-        ),
+        sa.Column("start_timestamp", sa.DateTime(timezone=True), nullable=True),
         sa.Column("end_timestamp", sa.DateTime(timezone=True), nullable=True),
         sa.Column(
             "worker_init", sqlmodel.sql.sqltypes.AutoString(), nullable=True
@@ -183,9 +177,7 @@ def upgrade() -> None:
             sqlmodel.sql.sqltypes.AutoString(),
             nullable=True,
         ),
-        sa.Column(
-            "status", sqlmodel.sql.sqltypes.AutoString(), nullable=False
-        ),
+        sa.Column("status", sqlmodel.sql.sqltypes.AutoString(), nullable=False),
         sa.Column("log", sqlmodel.sql.sqltypes.AutoString(), nullable=True),
         sa.ForeignKeyConstraint(
             ["input_dataset_id"],
@@ -243,12 +235,8 @@ def downgrade() -> None:
     op.drop_table("resource")
     op.drop_table("applyworkflow")
     op.drop_table("workflow")
-    op.drop_index(
-        op.f("ix_oauthaccount_oauth_name"), table_name="oauthaccount"
-    )
-    op.drop_index(
-        op.f("ix_oauthaccount_account_id"), table_name="oauthaccount"
-    )
+    op.drop_index(op.f("ix_oauthaccount_oauth_name"), table_name="oauthaccount")
+    op.drop_index(op.f("ix_oauthaccount_account_id"), table_name="oauthaccount")
     op.drop_table("oauthaccount")
     op.drop_table("linkuserproject")
     op.drop_table("dataset")

fractal_server/migrations/versions/5bf02391cfef_v2.py

@@ -5,11 +5,11 @@ Revises: 9fd26a2b0de4
 Create Date: 2024-04-18 10:35:19.067833
 
 """
+
 import sqlalchemy as sa
 import sqlmodel
 from alembic import op
 
-
 # revision identifiers, used by Alembic.
 revision = "5bf02391cfef"
 down_revision = "9fd26a2b0de4"
@@ -50,9 +50,7 @@ def upgrade() -> None:
             sqlmodel.sql.sqltypes.AutoString(),
             nullable=True,
         ),
-        sa.Column(
-            "source", sqlmodel.sql.sqltypes.AutoString(), nullable=False
-        ),
+        sa.Column("source", sqlmodel.sql.sqltypes.AutoString(), nullable=False),
         sa.Column(
             "meta_non_parallel", sa.JSON(), server_default="{}", nullable=False
         ),
@@ -60,9 +58,7 @@ def upgrade() -> None:
             "meta_parallel", sa.JSON(), server_default="{}", nullable=False
         ),
         sa.Column("owner", sqlmodel.sql.sqltypes.AutoString(), nullable=True),
-        sa.Column(
-            "version", sqlmodel.sql.sqltypes.AutoString(), nullable=True
-        ),
+        sa.Column("version", sqlmodel.sql.sqltypes.AutoString(), nullable=True),
         sa.Column("args_schema_non_parallel", sa.JSON(), nullable=True),
         sa.Column("args_schema_parallel", sa.JSON(), nullable=True),
         sa.Column(
@@ -166,9 +162,7 @@ def upgrade() -> None:
             "start_timestamp", sa.DateTime(timezone=True), nullable=False
         ),
         sa.Column("end_timestamp", sa.DateTime(timezone=True), nullable=True),
-        sa.Column(
-            "status", sqlmodel.sql.sqltypes.AutoString(), nullable=False
-        ),
+        sa.Column("status", sqlmodel.sql.sqltypes.AutoString(), nullable=False),
         sa.Column("log", sqlmodel.sql.sqltypes.AutoString(), nullable=True),
         sa.ForeignKeyConstraint(
             ["dataset_id"],

fractal_server/migrations/versions/70e77f1c38b0_add_applyworkflow_first_task_index_and_.py

@@ -5,6 +5,7 @@ Revises: f384e1c0cf5d
 Create Date: 2023-07-17 11:39:47.679582
 
 """
+
 import sqlalchemy as sa
 from alembic import op
 from sqlalchemy.sql import column

fractal_server/migrations/versions/71eefd1dd202_add_slurm_accounts.py

@@ -5,11 +5,11 @@ Revises: d4fe3708d309
 Create Date: 2023-12-05 12:36:44.100065
 
 """
+
 import sqlalchemy as sa
 import sqlmodel
 from alembic import op
 
-
 # revision identifiers, used by Alembic.
 revision = "71eefd1dd202"
 down_revision = "d4fe3708d309"

fractal_server/migrations/versions/7673fe18c05d_remove_project_dir_server_default.py

@@ -5,8 +5,8 @@ Revises: 49d0856e9569
 Create Date: 2025-11-11 16:50:20.079193
 
 """
-from alembic import op
 
+from alembic import op
 
 # revision identifiers, used by Alembic.
 revision = "7673fe18c05d"

fractal_server/migrations/versions/791ce783d3d8_add_indices.py

@@ -5,8 +5,8 @@ Revises: 969d84257cac
 Create Date: 2025-06-03 09:32:30.757651
 
 """
-from alembic import op
 
+from alembic import op
 
 # revision identifiers, used by Alembic.
 revision = "791ce783d3d8"

fractal_server/migrations/versions/83bc2ad3ffcc_2_17_0.py

@@ -5,6 +5,7 @@ Revises: 981d588fe248
 Create Date: 2025-10-30 14:16:53.639006
 
 """
+
 import sqlalchemy as sa
 import sqlmodel
 from alembic import op

fractal_server/migrations/versions/84bf0fffde30_add_dumps_to_applyworkflow.py

@@ -5,6 +5,7 @@ Revises: 99ea79d9e5d2
 Create Date: 2023-10-26 16:11:44.061971
 
 """
+
 import sqlalchemy as sa
 from alembic import op
 

fractal_server/migrations/versions/8e8f227a3e36_update_taskv2_post_2_7_0.py

@@ -5,10 +5,10 @@ Revises: 034a469ec2eb
 Create Date: 2024-10-29 09:01:33.075251
 
 """
+
 import sqlalchemy as sa
 from alembic import op
 
-
 # revision identifiers, used by Alembic.
 revision = "8e8f227a3e36"
 down_revision = "034a469ec2eb"
@@ -31,9 +31,7 @@ def downgrade() -> None:
     # ### commands auto generated by Alembic - please adjust! ###
     with op.batch_alter_table("taskv2", schema=None) as batch_op:
         batch_op.add_column(
-            sa.Column(
-                "owner", sa.VARCHAR(), autoincrement=False, nullable=True
-            )
+            sa.Column("owner", sa.VARCHAR(), autoincrement=False, nullable=True)
         )
         batch_op.alter_column(
             "taskgroupv2_id", existing_type=sa.INTEGER(), nullable=True

fractal_server/migrations/versions/8f79bd162e35_add_docs_info_and_docs_link_to_task_.py

@@ -5,11 +5,11 @@ Revises: a7f4d6137b53
 Create Date: 2023-08-01 14:13:15.322398
 
 """
+
 import sqlalchemy as sa
 import sqlmodel
 from alembic import op
 
-
 # revision identifiers, used by Alembic.
 revision = "8f79bd162e35"
 down_revision = "a7f4d6137b53"

fractal_server/migrations/versions/94a47ea2d3ff_remove_cache_dir_slurm_user_and_slurm_.py

@@ -5,6 +5,7 @@ Revises: 9c5ae74c9b98
 Create Date: 2024-09-25 09:33:18.014831
 
 """
+
 import sqlalchemy as sa
 from alembic import op
 from sqlalchemy.dialects import postgresql

fractal_server/migrations/versions/969d84257cac_add_historyrun_task_id.py

@@ -5,10 +5,10 @@ Revises: c90a7c76e996
 Create Date: 2025-05-13 11:17:22.089308
 
 """
+
 import sqlalchemy as sa
 from alembic import op
 
-
 # revision identifiers, used by Alembic.
 revision = "969d84257cac"
 down_revision = "c90a7c76e996"

fractal_server/migrations/versions/97f444d47249_add_applyworkflow_project_dump.py

@@ -5,10 +5,10 @@ Revises: 71eefd1dd202
 Create Date: 2023-12-05 15:36:48.573358
 
 """
+
 import sqlalchemy as sa
 from alembic import op
 
-
 # revision identifiers, used by Alembic.
 revision = "97f444d47249"
 down_revision = "71eefd1dd202"

fractal_server/migrations/versions/981d588fe248_add_executor_error_log.py

@@ -5,11 +5,11 @@ Revises: 0f5f85bb2ae7
 Create Date: 2025-09-15 08:31:10.363449
 
 """
+
 import sqlalchemy as sa
 import sqlmodel
 from alembic import op
 
-
 # revision identifiers, used by Alembic.
 revision = "981d588fe248"
 down_revision = "0f5f85bb2ae7"

fractal_server/migrations/versions/99ea79d9e5d2_add_dataset_history.py

@@ -5,10 +5,10 @@ Revises: 8f79bd162e35
 Create Date: 2023-10-16 09:45:15.132185
 
 """
+
 import sqlalchemy as sa
 from alembic import op
 
-
 # revision identifiers, used by Alembic.
 revision = "99ea79d9e5d2"
 down_revision = "8f79bd162e35"
@@ -20,9 +20,7 @@ def upgrade() -> None:
     # ### commands auto generated by Alembic - please adjust! ###
     with op.batch_alter_table("dataset", schema=None) as batch_op:
         batch_op.add_column(
-            sa.Column(
-                "history", sa.JSON(), server_default="[]", nullable=False
-            )
+            sa.Column("history", sa.JSON(), server_default="[]", nullable=False)
         )
 
     # ### end Alembic commands ###

fractal_server/migrations/versions/9c5ae74c9b98_add_user_settings_table.py

@@ -5,11 +5,11 @@ Revises: d9a140db5d42
 Create Date: 2024-09-24 12:01:13.393326
 
 """
+
 import sqlalchemy as sa
 import sqlmodel
 from alembic import op
 
-
 # revision identifiers, used by Alembic.
 revision = "9c5ae74c9b98"
 down_revision = "d9a140db5d42"

fractal_server/migrations/versions/9db60297b8b2_set_ondelete.py

@@ -5,8 +5,8 @@ Revises: e81103413827
 Create Date: 2025-04-07 13:13:14.596394
 
 """
-from alembic import op
 
+from alembic import op
 
 # revision identifiers, used by Alembic.
 revision = "9db60297b8b2"

fractal_server/migrations/versions/9fd26a2b0de4_add_workflow_timestamp_created.py

@@ -5,13 +5,13 @@ Revises: efa89c30e0a4
 Create Date: 2024-01-11 09:31:20.950090
 
 """
+
 from datetime import datetime
 from datetime import timezone
 
 import sqlalchemy as sa
 from alembic import op
 
-
 # revision identifiers, used by Alembic.
 revision = "9fd26a2b0de4"
 down_revision = "4cedeb448a53"

fractal_server/migrations/versions/a7f4d6137b53_add_workflow_dump_to_applyworkflow.py

@@ -5,10 +5,10 @@ Revises: 70e77f1c38b0
 Create Date: 2023-07-24 16:53:02.569582
 
 """
+
 import sqlalchemy as sa
 from alembic import op
 
-
 # revision identifiers, used by Alembic.
 revision = "a7f4d6137b53"
 down_revision = "70e77f1c38b0"

fractal_server/migrations/versions/af1ef1c83c9b_add_accounting_tables.py

@@ -5,6 +5,7 @@ Revises: 1eac13a26c83
 Create Date: 2025-02-17 14:22:32.701581
 
 """
+
 import sqlalchemy as sa
 from alembic import op
 from sqlalchemy.dialects import postgresql

fractal_server/migrations/versions/af8673379a5c_drop_old_filter_columns.py

@@ -5,6 +5,7 @@ Revises: db09233ad13a
 Create Date: 2025-01-30 14:44:04.302795
 
 """
+
 import sqlalchemy as sa
 from alembic import op
 from sqlalchemy.dialects import postgresql

fractal_server/migrations/versions/b1e7f7a1ff71_task_group_for_pixi.py

@@ -5,11 +5,11 @@ Revises: 791ce783d3d8
 Create Date: 2025-05-29 16:31:17.565973
 
 """
+
 import sqlalchemy as sa
 import sqlmodel
 from alembic import op
 
-
 # revision identifiers, used by Alembic.
 revision = "b1e7f7a1ff71"
 down_revision = "791ce783d3d8"

fractal_server/migrations/versions/b3ffb095f973_json_to_jsonb.py

@@ -5,6 +5,7 @@ Revises: b1e7f7a1ff71
 Create Date: 2025-06-19 10:12:06.699107
 
 """
+
 import sqlalchemy as sa
 from alembic import op
 from sqlalchemy.dialects import postgresql

fractal_server/migrations/versions/c90a7c76e996_job_id_in_history_run.py

@@ -5,10 +5,10 @@ Revises: f37aceb45062
 Create Date: 2025-04-16 10:44:30.219309
 
 """
+
 import sqlalchemy as sa
 from alembic import op
 
-
 # revision identifiers, used by Alembic.
 revision = "c90a7c76e996"
 down_revision = "f37aceb45062"

fractal_server/migrations/versions/caba9fb1ea5e_drop_useroauth_user_settings_id.py

@@ -5,10 +5,10 @@ Revises: 83bc2ad3ffcc
 Create Date: 2025-11-11 16:38:27.243693
 
 """
+
 import sqlalchemy as sa
 from alembic import op
 
-
 # revision identifiers, used by Alembic.
 revision = "caba9fb1ea5e"
 down_revision = "83bc2ad3ffcc"

fractal_server/migrations/versions/d256a7379ab8_taskgroup_activity_and_venv_info_to_.py

@@ -5,6 +5,7 @@ Revises: 19eca0dd47a9
 Create Date: 2024-11-20 15:01:52.659832
 
 """
+
 import sqlalchemy as sa
 import sqlmodel
 from alembic import op
@@ -33,16 +34,10 @@ def upgrade() -> None:
         sa.Column(
             "version", sqlmodel.sql.sqltypes.AutoString(), nullable=False
         ),
-        sa.Column(
-            "status", sqlmodel.sql.sqltypes.AutoString(), nullable=False
-        ),
-        sa.Column(
-            "action", sqlmodel.sql.sqltypes.AutoString(), nullable=False
-        ),
+        sa.Column("status", sqlmodel.sql.sqltypes.AutoString(), nullable=False),
+        sa.Column("action", sqlmodel.sql.sqltypes.AutoString(), nullable=False),
         sa.Column("log", sqlmodel.sql.sqltypes.AutoString(), nullable=True),
-        sa.Column(
-            "timestamp_ended", sa.DateTime(timezone=True), nullable=True
-        ),
+        sa.Column("timestamp_ended", sa.DateTime(timezone=True), nullable=True),
         sa.ForeignKeyConstraint(
             ["taskgroupv2_id"],
             ["taskgroupv2.id"],

fractal_server/migrations/versions/d4fe3708d309_make_applyworkflow_workflow_dump_non_.py

@@ -5,6 +5,7 @@ Revises: e75cac726012
 Create Date: 2023-11-30 14:58:23.917824
 
 """
+
 import sqlalchemy as sa
 from alembic import op
 

fractal_server/migrations/versions/da2cb2ac4255_user_group_viewer_paths.py

@@ -5,10 +5,10 @@ Revises: 94a47ea2d3ff
 Create Date: 2024-09-26 14:39:26.135101
 
 """
+
 import sqlalchemy as sa
 from alembic import op
 
-
 # revision identifiers, used by Alembic.
 revision = "da2cb2ac4255"
 down_revision = "94a47ea2d3ff"

fractal_server/migrations/versions/db09233ad13a_split_filters_and_keep_old_columns.py

@@ -5,6 +5,7 @@ Revises: 316140ff7ee1
 Create Date: 2025-01-14 14:50:46.007222
 
 """
+
 import sqlalchemy as sa
 from alembic import op
 from sqlalchemy.dialects import postgresql