fractal-server 2.16.5__py3-none-any.whl → 2.17.0__py3-none-any.whl

{fractal_server-2.16.5.dist-info → fractal_server-2.17.0.dist-info}/RECORD

@@ -1,96 +1,108 @@
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-fractal_server/__main__.py,sha256=rkM8xjY1KeS3l63irB8yCrlVobR-73uDapC4wvrIlxI,6957
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 fractal_server/alembic.ini,sha256=MWwi7GzjzawI9cCAK1LW7NxIBQDUqD12-ptJoq5JpP0,3153
 fractal_server/app/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-fractal_server/app/db/__init__.py,sha256=U2gwpNyy79iMsK1lg43LRl9z-MW8wiOaICJ7GGdA4yo,2814
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 fractal_server/app/models/__init__.py,sha256=xJWiGAwpXmCpnFMC4c_HTqoUCzMOXrakoGLUH_uMvdA,415
 fractal_server/app/models/linkusergroup.py,sha256=3KkkE4QIUAlTrBAZs_tVy0pGvAxUAq6yOEjflct_z2M,678
 fractal_server/app/models/linkuserproject.py,sha256=hvaxh3Lkiy2uUCwB8gvn8RorCpvxSSdzWdCS_U1GL7g,315
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 fractal_server/app/models/v2/accounting.py,sha256=i-2TsjqyuclxFQ21C-TeDoss7ZBTRuXdzIJfVr2UxwE,1081
 fractal_server/app/models/v2/dataset.py,sha256=P_zy4dPQAqrCALQ6737VkAFk1SvcgYjnslGUZhPI8sc,1226
 fractal_server/app/models/v2/history.py,sha256=CBN2WVg9vW5pHU1RP8TkB_nnJrwnuifCcxgnd53UtEE,2163
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 fractal_server/app/models/v2/task.py,sha256=iBIQB8POQE5MyKvLZhw7jZWlBhbrThzCDzRTcgiAczQ,1493
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 fractal_server/app/models/v2/workflow.py,sha256=gBjDXO-RytVT81aAlesImBhmVHrwNUrmsF_UsGa1qLM,1057
 fractal_server/app/models/v2/workflowtask.py,sha256=qkTc-hcFLpJUVsEUbnDq2BJL0qg9jagy2doZeusF1ek,1266
 fractal_server/app/routes/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 fractal_server/app/routes/admin/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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 fractal_server/app/routes/api/v2/__init__.py,sha256=D3sRRsqkmZO6kBxUjg40q0aRDsnuXI4sOOfn0xF9JsM,2820
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 fractal_server/app/routes/api/v2/_aux_functions_task_version_update.py,sha256=PKjV7r8YsPRXoNiVSnOK4KBYVV3l_Yb_ZPrqAkMkXrQ,1182
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 fractal_server/app/schemas/v2/accounting.py,sha256=C_ekrYQwhi7PtrxxB07oVAG2y1NLigXjYwyp4E38fao,396
 fractal_server/app/schemas/v2/dataset.py,sha256=NKCjBwGBC7mPiSlXktZAcleJsvlLY6KfNKw7Wx4Zfqk,1728
 fractal_server/app/schemas/v2/dumps.py,sha256=LCYiNF_FNYiA6HYp5GyFao3IKRX0RpzgNpiX56IwgCE,2293
 fractal_server/app/schemas/v2/history.py,sha256=pZiMKfh6nMWbTp5MUtrnGySPKbeRFf5tM1VLFaTgGcw,1784
 fractal_server/app/schemas/v2/job.py,sha256=BuiNzAX2Kl-b7LJnAiqCGDC9h6bGEjKvsHQIgf5mjHQ,3330
 fractal_server/app/schemas/v2/manifest.py,sha256=QUpXMDB8WkB1F4UK-yYmm3O8bXoHwDGURnqwn6ayO_I,6674
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 fractal_server/app/schemas/v2/project.py,sha256=7UC0aZLgtmkaAiPykeUj-9OZXhMkoyi3V-475UW_EQs,654
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 fractal_server/app/schemas/v2/status_legacy.py,sha256=eQT1zGxbkzSwd0EqclsOdZ60n1x6J3DB1CZ3m4LYyxc,955
 fractal_server/app/schemas/v2/task.py,sha256=IJv8loB4kx9FBkaIHoiMsswQyq02FxvyAnHK1u074fU,4364
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 fractal_server/app/schemas/v2/workflow.py,sha256=L-dW6SzCH_VNoH6ENip44lTgGGqVYHHBk_3PtM-Ooy8,1772
 fractal_server/app/schemas/v2/workflowtask.py,sha256=6eweAMyziwaoMT-7R1fVJYunIeZKzT0-7fAVgPO_FEc,3639
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+fractal_server/config/_email.py,sha256=j1QmZCyspNbD1xxkypc9Kv299tU3vTO1AqDFJ8-LZzQ,4201
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+fractal_server/config/_oauth.py,sha256=7J4FphGVFfVmtQycCkas6scEJQJGZUGEzQ-t2PZiqSo,1934
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 fractal_server/data_migrations/README.md,sha256=_3AEFvDg9YkybDqCLlFPdDmGJvr6Tw7HRI14aZ3LOIw,398
 fractal_server/data_migrations/tools.py,sha256=LeMeASwYGtEqd-3wOLle6WARdTGAimoyMmRbbJl-hAM,572
 fractal_server/exceptions.py,sha256=7ftpWwNsTQmNonWCynhH5ErUh1haPPhIaVPrNHla7-o,53
@@ -98,11 +110,11 @@ fractal_server/gunicorn_fractal.py,sha256=u6U01TLGlXgq1v8QmEpLih3QnsInZD7CqphgJ_
 fractal_server/images/__init__.py,sha256=-_wjoKtSX02P1KjDxDP_EXKvmbONTRmbf7iGVTsyBpM,154
 fractal_server/images/models.py,sha256=6WchcIzLLLwdkLNRfg71Dl4Y-9UFLPyrrzh1lWgjuP0,1245
 fractal_server/images/status_tools.py,sha256=KICcThwHniHNkDftzJmK_n2gQK2IeTKlR_PFAesf204,4912
-fractal_server/images/tools.py,sha256=nhkp_7bBI6pmJpqbg1s7xjoZKW5S4aNInkym5ntvJYA,4169
-fractal_server/logger.py,sha256=QIeVn3QpZsiIL2jDdrKotr-MLyDcZYgiPiTluFU46lE,5317
-fractal_server/main.py,sha256=bq-G4HDpLz-y97x4LCh9c0ZA8AQhFRpeJqwQiPfXQMM,4556
+fractal_server/images/tools.py,sha256=37jVIU6RiAGbiyucNDlKe9J3yN3Y47NOvv-RJor9Jm0,4154
+fractal_server/logger.py,sha256=2_IN0WcIzLEX20HFUUkwyZGSIi0yLbE0JamkzXREDZw,5302
+fractal_server/main.py,sha256=4HJO8EiGJp0Iw0p3xEm_zhwjnT4joFG1KuGccIIndjo,4419
 fractal_server/migrations/env.py,sha256=nfyBpMIOT3kny6t-b-tUjyRjZ4k906bb1_wCQ7me1BI,1353
-fractal_server/migrations/naming_convention.py,sha256=htbKrVdetx3pklowb_9Cdo5RqeF0fJ740DNecY5de_M,265
+fractal_server/migrations/naming_convention.py,sha256=bSEMiMZeArmWKrUk-12lhnOw1pAFMg6LEl7yucohPqc,263
 fractal_server/migrations/versions/034a469ec2eb_task_groups.py,sha256=vrPhC8hfFu1c4HmLHNZyCuqEfecFD8-bWc49bXMNes0,6199
 fractal_server/migrations/versions/091b01f51f88_add_usergroup_and_linkusergroup_table.py,sha256=-BSS9AFTPcu3gYC-sYbawSy4MWQQx8TfMb5BW5EBKmQ,1450
 fractal_server/migrations/versions/0f5f85bb2ae7_add_pre_pinned_packages.py,sha256=FxnIvfktnSjy2nBKDIow24on1nMkLw1THhO84FtNZSo,1055
@@ -119,6 +131,7 @@ fractal_server/migrations/versions/5bf02391cfef_v2.py,sha256=axhNkr_H6R4rRbY7oGY
 fractal_server/migrations/versions/70e77f1c38b0_add_applyworkflow_first_task_index_and_.py,sha256=Q-DsMzG3IcUV2Ol1dhJWosDvKERamBE6QvA2zzS5zpQ,1632
 fractal_server/migrations/versions/71eefd1dd202_add_slurm_accounts.py,sha256=mbWuCkTpRAdGbRhW7lhXs_e5S6O37UAcCN6JfoY5H8A,1353
 fractal_server/migrations/versions/791ce783d3d8_add_indices.py,sha256=gNE6AgJgeJZY99Fbd336Z9see3gRMQvuNBC0xDk_5sw,1154
+fractal_server/migrations/versions/83bc2ad3ffcc_2_17_0.py,sha256=U7t_8n58taRkd9sxCXOshrTr9M5AhlsQne8SGKa5Jt4,6377
 fractal_server/migrations/versions/84bf0fffde30_add_dumps_to_applyworkflow.py,sha256=NSCuhANChsg76vBkShBl-9tQ4VEHubOjtAv1etHhlvY,2684
 fractal_server/migrations/versions/8e8f227a3e36_update_taskv2_post_2_7_0.py,sha256=68y9-fpSuKx6KPtM_9n8Ho0I1qwa8IoG-yJqXUYQrGg,1111
 fractal_server/migrations/versions/8f79bd162e35_add_docs_info_and_docs_link_to_task_.py,sha256=6pgODDtyAxevZvAJBj9IJ41inhV1RpwbpZr_qfPPu1A,1115
@@ -149,95 +162,101 @@ fractal_server/migrations/versions/fbce16ff4e47_new_history_items.py,sha256=TDWC
 fractal_server/py.typed,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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 fractal_server/runner/components.py,sha256=-Ii5l8d_V6f5DFOd-Zsr8VYmOsyqw0Hox9fEFQiuqxY,66
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 fractal_server/runner/executors/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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 fractal_server/runner/executors/call_command_wrapper.py,sha256=n6c9haKyIudBlz9-d3GQb19rewBR54qLG8jlrma6okk,1415
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 fractal_server/tasks/utils.py,sha256=V7dj8o2AnoHhGSTYlqJHcRFhCIpmOrMOUhtiE_DvRVA,291
 fractal_server/tasks/v2/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 fractal_server/tasks/v2/local/__init__.py,sha256=2dJqJIwn9UEANg8lPFprxVLk3ug-4xYIb5pvIsqPb5s,353
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 fractal_server/tasks/v2/ssh/__init__.py,sha256=dPK6BtEZVh1GiFP05j1RKTEnZvjJez8o2KkMC2hWXaw,339
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 fractal_server/tasks/v2/templates/1_create_venv.sh,sha256=PK0jdHKtQpda1zULebBaVPORt4t6V17wa4N1ohcj5ac,548
 fractal_server/tasks/v2/templates/2_pip_install.sh,sha256=vN9DX-eucJjB-XCuQuZmkuATGBzL4FlDQJTQdVewJG8,2155
 fractal_server/tasks/v2/templates/3_pip_freeze.sh,sha256=JldREScEBI4cD_qjfX4UK7V4aI-FnX9ZvVNxgpSOBFc,168
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 fractal_server/tasks/v2/templates/5_get_venv_size_and_file_number.sh,sha256=q-6ZUvA6w6FDVEoSd9O63LaJ9tKZc7qAFH72SGPrd_k,284
 fractal_server/tasks/v2/templates/6_pip_install_from_freeze.sh,sha256=jHoALPagSCD1_HuqrxEYibWAJNOUxQGm-A2oE3f_LPE,982
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 fractal_server/zip_tools.py,sha256=H0w7wS5yE4ebj7hw1_77YQ959dl2c-L0WX6J_ro1TY4,4884
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{fractal_server-2.16.5.dist-info → fractal_server-2.17.0.dist-info}/WHEEL

@@ -1,4 +1,4 @@
 Wheel-Version: 1.0
-Generator: poetry-core 2.1.3
+Generator: poetry-core 2.2.1
 Root-Is-Purelib: true
 Tag: py3-none-any

fractal_server/app/routes/aux/validate_user_settings.py

@@ -1,73 +0,0 @@
-from fastapi import HTTPException
-from fastapi import status
-from pydantic import ValidationError
-
-from fractal_server.app.db import AsyncSession
-from fractal_server.app.models import UserOAuth
-from fractal_server.app.models import UserSettings
-from fractal_server.app.user_settings import SlurmSshUserSettings
-from fractal_server.app.user_settings import SlurmSudoUserSettings
-from fractal_server.logger import set_logger
-
-logger = set_logger(__name__)
-
-
-def verify_user_has_settings(user: UserOAuth) -> None:
-    """
-    Check that the `user.user_settings_id` foreign-key is set.
-
-    NOTE: This check will become useless when we make the foreign-key column
-    required, but for the moment (as of v2.6.0) we have to keep it in place.
-
-    Arguments:
-        user: The user to be checked.
-    """
-    if user.user_settings_id is None:
-        raise HTTPException(
-            status_code=status.HTTP_422_UNPROCESSABLE_CONTENT,
-            detail=f"Error: user '{user.email}' has no settings.",
-        )
-
-
-async def validate_user_settings(
-    *, user: UserOAuth, backend: str, db: AsyncSession
-) -> UserSettings:
-    """
-    Get a UserSettings object and validate it based on a given Fractal backend.
-
-    Arguments:
-        user: The user whose settings we should validate.
-        backend: The value of `FRACTAL_RUNNER_BACKEND`
-        db: An async DB session
-
-    Returns:
-        `UserSetting` object associated to `user`, if valid.
-    """
-
-    verify_user_has_settings(user)
-
-    user_settings = await db.get(UserSettings, user.user_settings_id)
-
-    if backend == "slurm_ssh":
-        UserSettingsValidationModel = SlurmSshUserSettings
-    elif backend == "slurm":
-        UserSettingsValidationModel = SlurmSudoUserSettings
-    else:
-        # For other backends, we don't validate anything
-        return user_settings
-
-    try:
-        UserSettingsValidationModel(**user_settings.model_dump())
-    except ValidationError as e:
-        error_msg = (
-            "User settings are not valid for "
-            f"FRACTAL_RUNNER_BACKEND='{backend}'. "
-            f"Original error: {str(e)}"
-        )
-        logger.warning(error_msg)
-        raise HTTPException(
-            status_code=status.HTTP_422_UNPROCESSABLE_CONTENT,
-            detail=error_msg,
-        )
-
-    return user_settings

fractal_server/app/schemas/user_settings.py

@@ -1,67 +0,0 @@
-from pydantic import BaseModel
-from pydantic import ConfigDict
-from pydantic import field_validator
-
-from fractal_server.string_tools import validate_cmd
-from fractal_server.types import AbsolutePathStr
-from fractal_server.types import ListUniqueNonEmptyString
-from fractal_server.types import NonEmptyStr
-
-__all__ = (
-    "UserSettingsRead",
-    "UserSettingsReadStrict",
-    "UserSettingsUpdate",
-    "UserSettingsUpdateStrict",
-)
-
-
-class UserSettingsRead(BaseModel):
-    """
-    Schema reserved for superusers
-    """
-
-    id: int
-    ssh_host: str | None = None
-    ssh_username: str | None = None
-    ssh_private_key_path: str | None = None
-    ssh_tasks_dir: str | None = None
-    ssh_jobs_dir: str | None = None
-    slurm_user: str | None = None
-    slurm_accounts: list[str]
-    project_dir: str | None = None
-
-
-class UserSettingsReadStrict(BaseModel):
-    slurm_user: str | None = None
-    slurm_accounts: list[str]
-    ssh_username: str | None = None
-    project_dir: str | None = None
-
-
-class UserSettingsUpdate(BaseModel):
-    """
-    Schema reserved for superusers
-    """
-
-    model_config = ConfigDict(extra="forbid")
-
-    ssh_host: NonEmptyStr | None = None
-    ssh_username: NonEmptyStr | None = None
-    ssh_private_key_path: AbsolutePathStr | None = None
-    ssh_tasks_dir: AbsolutePathStr | None = None
-    ssh_jobs_dir: AbsolutePathStr | None = None
-    slurm_user: NonEmptyStr | None = None
-    slurm_accounts: ListUniqueNonEmptyString | None = None
-    project_dir: AbsolutePathStr | None = None
-
-    @field_validator("project_dir", mode="after")
-    @classmethod
-    def validate_project_dir(cls, value):
-        if value is not None:
-            validate_cmd(value)
-        return value
-
-
-class UserSettingsUpdateStrict(BaseModel):
-    model_config = ConfigDict(extra="forbid")
-    slurm_accounts: ListUniqueNonEmptyString | None = None

fractal_server/app/user_settings.py

@@ -1,42 +0,0 @@
-# TODO: move this file to the appropriate path
-from pydantic import BaseModel
-
-
-class SlurmSshUserSettings(BaseModel):
-    """
-    Subset of user settings which must be present for task collection and job
-    execution when using the Slurm-SSH runner.
-
-    Attributes:
-        ssh_host: SSH-reachable host where a SLURM client is available.
-        ssh_username: User on `ssh_host`.
-        ssh_private_key_path: Path of private SSH key for `ssh_username`.
-        ssh_tasks_dir: Task-venvs base folder on `ssh_host`.
-        ssh_jobs_dir: Jobs base folder on `ssh_host`.
-        slurm_accounts:
-            List of SLURM accounts, to be used upon Fractal job submission.
-    """
-
-    ssh_host: str
-    ssh_username: str
-    ssh_private_key_path: str
-    ssh_tasks_dir: str
-    ssh_jobs_dir: str
-    slurm_accounts: list[str]
-
-
-class SlurmSudoUserSettings(BaseModel):
-    """
-    Subset of user settings which must be present for task collection and job
-    execution when using the Slurm-sudo runner.
-
-    Attributes:
-        slurm_user: User to be impersonated via `sudo -u`.
-        project_dir: Folder where `slurm_user` can write.
-        slurm_accounts:
-            List of SLURM accounts, to be used upon Fractal job submission.
-    """
-
-    slurm_user: str
-    project_dir: str
-    slurm_accounts: list[str]