fractal-server 2.14.0a2__py3-none-any.whl → 2.14.0a3__py3-none-any.whl

fractal_server/__init__.py

@@ -1 +1 @@
-__VERSION__ = "2.14.0a2"
+__VERSION__ = "2.14.0a3"

fractal_server/app/history/image_updates.py

@@ -83,7 +83,8 @@ def update_single_image_logfile(
 ) -> None:
 
     logger.debug(
-        f"[update_single_image_logfile] {history_item_id=}, {logfile=}, {zarr_url=}"
+        "[update_single_image_logfile] "
+        f"{history_item_id=}, {logfile=}, {zarr_url=}"
     )
 
     with next(get_sync_db()) as db:

fractal_server/app/routes/admin/v2/task.py

@@ -68,7 +68,7 @@ async def query_tasks(
     db: AsyncSession = Depends(get_async_db),
 ) -> list[TaskV2Info]:
     """
-    Query `TaskV2` table and get informations about related items
+    Query `TaskV2` table and get information about related items
     (WorkflowV2s and ProjectV2s)
 
     Args:

fractal_server/app/routes/api/v2/history.py

@@ -140,20 +140,27 @@ async def get_per_workflowtask_subsets_aggregated_info(
         .group_by(ImageStatus.parameters_hash)
     )
     res = await db.execute(stm)
-    hash_statuses = res.all()
+    hash_to_statuses = res.all()
 
-    result = []
-    for _hash, statuses in hash_statuses:
-        dump = await db.execute(
-            select(HistoryItemV2.workflowtask_dump)
+    subsets = []
+    for parameters_hash, statuses in hash_to_statuses:
+        # Get the oldest HistoryItemV2 matching with `parameters_hash`
+        stm = (
+            select(HistoryItemV2)
             .where(HistoryItemV2.workflowtask_id == workflowtask_id)
             .where(HistoryItemV2.dataset_id == dataset_id)
-            .where(HistoryItemV2.parameters_hash == _hash)
+            .where(HistoryItemV2.parameters_hash == parameters_hash)
+            .order_by(HistoryItemV2.timestamp_started)
+            .limit(1)
         )
-        result.append(
+        res = await db.execute(stm)
+        oldest_history_item = res.scalar_one()
+
+        subsets.append(
             {
-                "workflowtask_dump": dump.scalar_one(),
-                "parameters_hash": _hash,
+                "_timestamp": oldest_history_item.timestamp_started,
+                "workflowtask_dump": oldest_history_item.workflowtask_dump,
+                "parameters_hash": parameters_hash,
                 "info": {
                     "num_done_images": statuses.count(
                         HistoryItemImageStatus.DONE
@@ -168,7 +175,11 @@ async def get_per_workflowtask_subsets_aggregated_info(
             }
         )
 
-    return JSONResponse(content=result, status_code=200)
+    # Use `_timestamp` values for sorting, and then drop them from the response
+    sorted_results = sorted(subsets, key=lambda obj: obj["_timestamp"])
+    [item.pop("_timestamp") for item in sorted_results]
+
+    return JSONResponse(content=sorted_results, status_code=200)
 
 
 @router.get("/project/{project_id}/status/images/")

fractal_server/app/routes/api/v2/project.py

@@ -57,7 +57,7 @@ async def create_project(
     db: AsyncSession = Depends(get_async_db),
 ) -> Optional[ProjectReadV2]:
     """
-    Create new poject
+    Create new project
     """
 
     # Check that there is no project with the same user and name

fractal_server/app/runner/executors/base_runner.py

@@ -106,7 +106,8 @@ class BaseRunner(object):
                 )
             if _COMPONENT_KEY_ not in single_kwargs.keys():
                 raise ValueError(
-                    f"No '{_COMPONENT_KEY_}' key in in {list(single_kwargs.keys())}"
+                    f"No '{_COMPONENT_KEY_}' key "
+                    f"in {list(single_kwargs.keys())}"
                 )
         if not in_compound_task:
             zarr_urls = [kwargs["zarr_url"] for kwargs in list_parameters]

fractal_server/app/runner/executors/local/_submit_setup.py

@@ -21,18 +21,10 @@ def _local_submit_setup(
     FIXME
 
     Arguments:
-        wftask:
-            WorkflowTask for which the configuration is to be assembled
-        workflow_dir_local:
-            Not used in this function.
-        workflow_dir_remote:
-            Not used in this function.
-
-    Returns:
-        submit_setup_dict:
-            A dictionary that will be passed on to
-            `FractalThreadPoolExecutor.submit` and
-            `FractalThreadPoolExecutor.map`, so as to set extra options.
+        wftask: WorkflowTask for which the configuration is to be assembled
+        root_dir_local:
+        root_dir_rempote: Not used in this function.
+        which_type: Whether it is a parallel or non-parallel task.
     """
 
     local_backend_config = get_local_backend_config(
@@ -43,7 +35,7 @@ def _local_submit_setup(
     # Get TaskFiles object
     task_files = TaskFiles(
         root_dir_local=root_dir_local,
-        root_dir_remote=root_dir_remote,
+        root_dir_remote=root_dir_local,
         task_order=wftask.order,
         task_name=wftask.task.name,
     )

fractal_server/app/runner/executors/slurm_common/_slurm_config.py

@@ -213,7 +213,7 @@ class SlurmConfig(BaseModel):
     expected file content are defined in
     [`SlurmConfigFile`](./#fractal_server.app.runner._slurm._slurm_config.SlurmConfigFile)).
 
-    Part of the attributes map directly to some of the SLURM attribues (see
+    Part of the attributes map directly to some of the SLURM attributes (see
     https://slurm.schedmd.com/sbatch.html), e.g. `partition`. Other attributes
     are metaparameters which are needed in fractal-server to combine multiple
     tasks in the same SLURM job (e.g. `parallel_tasks_per_job` or

fractal_server/app/runner/executors/slurm_common/get_slurm_config.py

@@ -19,7 +19,7 @@ def get_slurm_config(
     Prepare a `SlurmConfig` configuration object
 
     The argument `which_type` determines whether we use `wftask.meta_parallel`
-    or `wftask.meta_non_parallel`. In the following descritpion, let us assume
+    or `wftask.meta_non_parallel`. In the following description, let us assume
     that `which_type="parallel"`.
 
     The sources for `SlurmConfig` attributes, in increasing priority order, are

fractal_server/app/runner/executors/slurm_common/remote.py

@@ -134,7 +134,7 @@ def worker(
         _extra_import_paths = extra_import_paths.split(":")
         sys.path[:0] = _extra_import_paths
 
-    # Execute the job and catpure exceptions
+    # Execute the job and capture exceptions
     try:
         with open(in_fname, "rb") as f:
             indata = f.read()

fractal_server/app/runner/v2/__init__.py

@@ -2,7 +2,7 @@
 Runner backend subsystem root V2
 
 This module is the single entry point to the runner backend subsystem V2.
-Other subystems should only import this module and not its submodules or
+Other subsystems should only import this module and not its submodules or
 the individual backends.
 """
 import os
@@ -118,7 +118,7 @@ def submit_workflow(
             )
         except Exception as e:
             logger.error(
-                f"Error conneting to the database. Original error: {str(e)}"
+                f"Error connecting to the database. Original error: {str(e)}"
             )
             reset_logger_handlers(logger)
             return

fractal_server/app/runner/v2/_slurm_ssh.py

@@ -11,7 +11,7 @@
 # Institute for Biomedical Research and Pelkmans Lab from the University of
 # Zurich.
 """
-Slurm Bakend
+Slurm Backend
 
 This backend runs fractal workflows in a SLURM cluster using Clusterfutures
 Executor objects.

fractal_server/app/runner/v2/_slurm_sudo.py

@@ -11,7 +11,7 @@
 # Institute for Biomedical Research and Pelkmans Lab from the University of
 # Zurich.
 """
-Slurm Bakend
+Slurm Backend
 
 This backend runs fractal workflows in a SLURM cluster using Clusterfutures
 Executor objects.

fractal_server/app/runner/v2/runner.py

@@ -127,7 +127,7 @@ def execute_tasks_v2(
                         dataset_id=dataset.id,
                         parameters_hash=parameters_hash,
                         status=HistoryItemImageStatus.SUBMITTED,
-                        logfile="/placeholder",
+                        logfile=None,
                     )
                 )
             db.commit()
@@ -198,7 +198,8 @@ def execute_tasks_v2(
         # Update image list
         num_new_images = 0
         current_task_output.check_zarr_urls_are_unique()
-        # FIXME: Introduce for loop over task outputs, and processe them sequentially
+        # FIXME: Introduce for loop over task outputs, and processe them
+        # sequentially
         # each failure should lead to an update of the specific image status
         for image_obj in current_task_output.image_list_updates:
             image = image_obj.model_dump()

fractal_server/app/runner/v2/runner_functions.py

@@ -1,9 +1,7 @@
 import functools
 import logging
-import traceback
 from pathlib import Path
 from typing import Any
-from typing import Callable
 from typing import Literal
 from typing import Optional
 
@@ -59,38 +57,18 @@ def _cast_and_validate_InitTaskOutput(
         )
 
 
-def no_op_submit_setup_call(*args, **kwargs) -> dict:
+def no_op_submit_setup_call(
+    *,
+    wftask: WorkflowTaskV2,
+    root_dir_local: Path,
+    which_type: Literal["non_parallel", "parallel"],
+) -> dict[str, Any]:
     """
     Default (no-operation) interface of submit_setup_call in V2.
     """
     return {}
 
 
-# Backend-specific configuration
-def _get_executor_options(
-    *,
-    wftask: WorkflowTaskV2,
-    workflow_dir_local: Path,
-    workflow_dir_remote: Path,
-    submit_setup_call: Callable,
-    which_type: Literal["non_parallel", "parallel"],
-) -> dict:
-    try:
-        options = submit_setup_call(
-            wftask=wftask,
-            root_dir_local=workflow_dir_local,
-            root_dir_remote=workflow_dir_remote,
-            which_type=which_type,
-        )
-    except Exception as e:
-        tb = "".join(traceback.format_tb(e.__traceback__))
-        raise RuntimeError(
-            f"{type(e)} error in {submit_setup_call=}\n"
-            f"Original traceback:\n{tb}"
-        )
-    return options
-
-
 def _check_parallelization_list_size(my_list):
     if len(my_list) > MAX_PARALLELIZATION_LIST_SIZE:
         raise JobExecutionError(
@@ -109,7 +87,7 @@ def run_v2_task_non_parallel(
     workflow_dir_local: Path,
     workflow_dir_remote: Optional[Path] = None,
     executor: BaseRunner,
-    submit_setup_call: Callable = no_op_submit_setup_call,
+    submit_setup_call: callable = no_op_submit_setup_call,
     history_item_id: int,
 ) -> tuple[TaskOutput, int, dict[int, BaseException]]:
     """
@@ -123,11 +101,10 @@ def run_v2_task_non_parallel(
         )
         workflow_dir_remote = workflow_dir_local
 
-    executor_options = _get_executor_options(
+    executor_options = submit_setup_call(
         wftask=wftask,
-        workflow_dir_local=workflow_dir_local,
-        workflow_dir_remote=workflow_dir_remote,
-        submit_setup_call=submit_setup_call,
+        root_dir_local=workflow_dir_local,
+        root_dir_remote=workflow_dir_remote,
         which_type="non_parallel",
     )
 
@@ -169,7 +146,7 @@ def run_v2_task_parallel(
     executor: BaseRunner,
     workflow_dir_local: Path,
     workflow_dir_remote: Optional[Path] = None,
-    submit_setup_call: Callable = no_op_submit_setup_call,
+    submit_setup_call: callable = no_op_submit_setup_call,
     history_item_id: int,
 ) -> tuple[TaskOutput, int, dict[int, BaseException]]:
 
@@ -178,11 +155,10 @@ def run_v2_task_parallel(
 
     _check_parallelization_list_size(images)
 
-    executor_options = _get_executor_options(
+    executor_options = submit_setup_call(
         wftask=wftask,
-        workflow_dir_local=workflow_dir_local,
-        workflow_dir_remote=workflow_dir_remote,
-        submit_setup_call=submit_setup_call,
+        root_dir_local=workflow_dir_local,
+        root_dir_remote=workflow_dir_remote,
         which_type="parallel",
     )
 
@@ -237,22 +213,20 @@ def run_v2_task_compound(
     executor: BaseRunner,
     workflow_dir_local: Path,
     workflow_dir_remote: Optional[Path] = None,
-    submit_setup_call: Callable = no_op_submit_setup_call,
+    submit_setup_call: callable = no_op_submit_setup_call,
     history_item_id: int,
 ) -> tuple[TaskOutput, int, dict[int, BaseException]]:
 
-    executor_options_init = _get_executor_options(
+    executor_options_init = submit_setup_call(
         wftask=wftask,
-        workflow_dir_local=workflow_dir_local,
-        workflow_dir_remote=workflow_dir_remote,
-        submit_setup_call=submit_setup_call,
+        root_dir_local=workflow_dir_local,
+        root_dir_remote=workflow_dir_remote,
         which_type="non_parallel",
     )
-    executor_options_compute = _get_executor_options(
+    executor_options_compute = submit_setup_call(
         wftask=wftask,
-        workflow_dir_local=workflow_dir_local,
-        workflow_dir_remote=workflow_dir_remote,
-        submit_setup_call=submit_setup_call,
+        root_dir_local=workflow_dir_local,
+        root_dir_remote=workflow_dir_remote,
         which_type="parallel",
     )
 

fractal_server/app/schemas/v2/manifest.py

@@ -128,7 +128,7 @@ class ManifestV2(BaseModel):
             The list of tasks, represented as specified by subclasses of the
             _TaskManifestBase (a.k.a. TaskManifestType)
         has_args_schemas:
-            `True` if the manifest incldues JSON Schemas for the arguments of
+            `True` if the manifest includes JSON Schemas for the arguments of
             each task.
         args_schema_version:
             Label of how `args_schema`s were generated (e.g. `pydantic_v1`).

fractal_server/app/security/__init__.py

@@ -24,7 +24,7 @@ FastAPIUsers with Barer Token and cookie transports and register local routes.
 Then, for each OAuth client defined in the Fractal Settings configuration, it
 registers the client and the relative routes.
 
-All routes are registerd under the `auth/` prefix.
+All routes are registered under the `auth/` prefix.
 """
 import contextlib
 from typing import Any
@@ -296,7 +296,7 @@ async def _create_first_user(
     Private method to create the first fractal-server user
 
     Create a user with the given default arguments and return a message with
-    the relevant informations. If the user alredy exists, for example after a
+    the relevant information. If the user already exists, for example after a
     restart, it returns a message to inform that user already exists.
 
     **WARNING**: This function is only meant to create the first user, and then
@@ -312,7 +312,7 @@ async def _create_first_user(
         email: New user's email
         password: New user's password
         is_superuser: `True` if the new user is a superuser
-        is_verified: `True` if the new user is verifie
+        is_verified: `True` if the new user is verified
         username:
     """
     function_logger = set_logger("fractal_server.create_first_user")

fractal_server/config.py

@@ -589,11 +589,11 @@ class Settings(BaseSettings):
     """
     FRACTAL_EMAIL_SMTP_SERVER: Optional[str] = None
     """
-    SMPT server for the OAuth-signup emails.
+    SMTP server for the OAuth-signup emails.
     """
     FRACTAL_EMAIL_SMTP_PORT: Optional[int] = None
     """
-    SMPT server port for the OAuth-signup emails.
+    SMTP server port for the OAuth-signup emails.
     """
     FRACTAL_EMAIL_INSTANCE_NAME: Optional[str] = None
     """

fractal_server/tasks/v2/templates/4_pip_show.sh

@@ -20,7 +20,7 @@ echo
 # FIXME: only run pip-show once!
 
 # Extract information about paths
-# WARNING: this block will fail for paths which inlcude whitespace characters
+# WARNING: this block will fail for paths which include whitespace characters
 write_log "START pip show"
 $VENVPYTHON -m pip show ${PACKAGE_NAME}
 write_log "END   pip show"

{fractal_server-2.14.0a2.dist-info → fractal_server-2.14.0a3.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.3
 Name: fractal-server
-Version: 2.14.0a2
+Version: 2.14.0a3
 Summary: Backend component of the Fractal analytics platform
 Home-page: https://github.com/fractal-analytics-platform/fractal-server
 License: BSD-3-Clause

{fractal_server-2.14.0a2.dist-info → fractal_server-2.14.0a3.dist-info}/RECORD

@@ -1,10 +1,10 @@
-fractal_server/__init__.py,sha256=dWQvRQS4d6bb0CHJ35U72icZFcp1aPaXkJMRU7U2UPk,25
+fractal_server/__init__.py,sha256=hpk2FCu0xXoEuH8cDYFItQE2071uD_KsQqreoRWpt4A,25
 fractal_server/__main__.py,sha256=igfS2XL3e8JycuhASl2vsYuIPma0MG0cfPPFRuQfh14,6906
 fractal_server/alembic.ini,sha256=MWwi7GzjzawI9cCAK1LW7NxIBQDUqD12-ptJoq5JpP0,3153
 fractal_server/app/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 fractal_server/app/db/__init__.py,sha256=wup2wcOkyOh8Vd0Xm76PZn_naxeMqaL4eF8DHHXTGlI,2889
 fractal_server/app/history/__init__.py,sha256=bisQpsMCFmtQGhIsf9ES0HdEuH4DYkPxVO7SlvxaWTY,239
-fractal_server/app/history/image_updates.py,sha256=7fwZ11NBi3hfjdCl-6C3rA6bIXx0lITHtKMkjsSCRLs,3948
+fractal_server/app/history/image_updates.py,sha256=YqoOwPW97LQk9-o04zB1lSU0yQ90V0AcuhFIhTVUxos,3959
 fractal_server/app/history/status_enum.py,sha256=xBBLHQY2Z105b2_HVU9DVRgdEVbbjLm6l4kkcV0Q1Sk,275
 fractal_server/app/models/__init__.py,sha256=xJWiGAwpXmCpnFMC4c_HTqoUCzMOXrakoGLUH_uMvdA,415
 fractal_server/app/models/linkusergroup.py,sha256=LWTUfhH2uAnn_4moK7QdRUIHWtpw-hPZuW-5jClv_OE,610
@@ -28,7 +28,7 @@ fractal_server/app/routes/admin/v2/accounting.py,sha256=UDMPD9DMhMBcu4UsEOEtKMCG
 fractal_server/app/routes/admin/v2/impersonate.py,sha256=gc4lshfEPFR6W2asH7aKu6hqE6chzusdhAUVV9p51eU,1131
 fractal_server/app/routes/admin/v2/job.py,sha256=4soc-5d99QEsir7U9AqpofgaGggSBwgMm7mXW5LBvSI,7439
 fractal_server/app/routes/admin/v2/project.py,sha256=luy-yiGX1JYTdPm1hpIdDUUqPm8xHuipLy9k2X6zu74,1223
-fractal_server/app/routes/admin/v2/task.py,sha256=h6O_DLYgp7KMExydPRO-1UsvsYj8S52E3CjslDNJZnA,4375
+fractal_server/app/routes/admin/v2/task.py,sha256=QOwgyDU9m7T_wLMwkdgfFaoMjNxcDg6zMVpngxhUvqk,4374
 fractal_server/app/routes/admin/v2/task_group.py,sha256=XTjdqgABXZcx9EenaoqSmHh12BXSentUus3SV0oxBMs,7929
 fractal_server/app/routes/admin/v2/task_group_lifecycle.py,sha256=0e0ZJ_k75TVHaT2o8Xk33DPDSgh-eBhZf-y4y7t-Adg,9429
 fractal_server/app/routes/api/__init__.py,sha256=2IDheFi0OFdsUg7nbUiyahqybvpgXqeHUXIL2QtWrQQ,641
@@ -37,10 +37,10 @@ fractal_server/app/routes/api/v2/_aux_functions.py,sha256=pmYbsHjJexb5-zMCJQLNSt
 fractal_server/app/routes/api/v2/_aux_functions_task_lifecycle.py,sha256=qdXCb6IP8-qPEAxGZKljtjIqNzIAyRaAsQSRi5VqFHM,6773
 fractal_server/app/routes/api/v2/_aux_functions_tasks.py,sha256=uhNSs-jcS7ndIUFKiOC1yrDiViw3uvKEXi9UL04BMks,11642
 fractal_server/app/routes/api/v2/dataset.py,sha256=gS5169eJRGHBQNUnkDB75Bv3Kg8Ql-tMVw5_FAxUEKc,9664
-fractal_server/app/routes/api/v2/history.py,sha256=VTyZA6wAC3Uc-AfaaoQ-RsQdzZKIMkhSX142lwTI1tc,9260
+fractal_server/app/routes/api/v2/history.py,sha256=C_V_u2ab4i8v4bM-uQ0SV3Olyor_5olQRDYFsLco2Ac,9801
 fractal_server/app/routes/api/v2/images.py,sha256=wUhYomNLGtJTtu_pD2oQorcH2LISxo64Wxo6ogc4IXc,8185
 fractal_server/app/routes/api/v2/job.py,sha256=m89FTh9Px25oXCeWj2k2NdGWQaO2oxMh-6lZppcsJOY,5551
-fractal_server/app/routes/api/v2/project.py,sha256=mYTahW8udrfCbnVYrKPX2VPyT3kFjYScE500jZZz8e4,7827
+fractal_server/app/routes/api/v2/project.py,sha256=apWQNOdj2FIZmBl6Cjtr2tK-jUclEsw-ikKg6PMT8sU,7828
 fractal_server/app/routes/api/v2/submit.py,sha256=K4OjcSg476JXIeeMUaYdTDk8Qpj5IO5UULvfErI7Y5Y,8624
 fractal_server/app/routes/api/v2/task.py,sha256=z3_SxsXoKsbM9GGNJUdIiZisQwAJSBqvCc7thaJIOTU,7191
 fractal_server/app/routes/api/v2/task_collection.py,sha256=IDNF6sjDuU37HIQ0TuQA-TZIuf7nfHAQXUUNmkrlhLM,12706
@@ -69,18 +69,18 @@ fractal_server/app/runner/components.py,sha256=ZF8ct_Ky5k8IAcrmpYOZ-bc6OBgdELEig
 fractal_server/app/runner/compress_folder.py,sha256=HSc1tv7x2DBjBoXwugZlC79rm9GNBIWtQKK9yWn5ZBI,3991
 fractal_server/app/runner/exceptions.py,sha256=_qZ_t8O4umAdJ1ikockiF5rDJuxnEskrGrLjZcnQl7A,4159
 fractal_server/app/runner/executors/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-fractal_server/app/runner/executors/base_runner.py,sha256=uUA4hGeNF6d8IYZ80nueq7PSjuliWiFpyxnhTKBk0U4,3721
+fractal_server/app/runner/executors/base_runner.py,sha256=0E3gbSndXdEAxZwFCiZXrUd8tjEmvLa_ztPBGMJXtUw,3742
 fractal_server/app/runner/executors/local/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 fractal_server/app/runner/executors/local/_local_config.py,sha256=8dyg2Gh8L2FlG_jJRYLMkcMgVHGEY2w7DME9aaKXFFo,3688
-fractal_server/app/runner/executors/local/_submit_setup.py,sha256=6h4DVcVgzL8Oubw83zixvya4ljmNSXlG0Kp8a01OBLc,1440
+fractal_server/app/runner/executors/local/_submit_setup.py,sha256=pDc9Q6axXL8_5JAV0byXzGOLOB0bZF88_L9LZykOgwM,1220
 fractal_server/app/runner/executors/local/runner.py,sha256=tEI3qe9UQKgqNoY6gkP1b2O1yRw3VGTiPTDKztrCt2I,7577
 fractal_server/app/runner/executors/slurm_common/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 fractal_server/app/runner/executors/slurm_common/_batching.py,sha256=ZY020JZlDS5mfpgpWTChQkyHU7iLE5kx2HVd57_C6XA,8850
 fractal_server/app/runner/executors/slurm_common/_job_states.py,sha256=nuV-Zba38kDrRESOVB3gaGbrSPZc4q7YGichQaeqTW0,238
-fractal_server/app/runner/executors/slurm_common/_slurm_config.py,sha256=yqcjAlYF_Gasv0b013cg3vz7abmjIHIgOwei7bCojuk,15896
+fractal_server/app/runner/executors/slurm_common/_slurm_config.py,sha256=fZaFUUXqDH0p3DndCFUpFqTqyD2tMVCuSYgYLAycpVw,15897
 fractal_server/app/runner/executors/slurm_common/_submit_setup.py,sha256=crbfAAvXbxe_9PaokXkkVdPV65lSCFbInZ0RlT6uyHI,2746
-fractal_server/app/runner/executors/slurm_common/get_slurm_config.py,sha256=GwdJsEAP9vEBA-FkOGSRHHeRUv1E6bmKZwWyO5Daa70,5994
-fractal_server/app/runner/executors/slurm_common/remote.py,sha256=wLziIsGdSMiO-jIXM8x77JRK82g_2hx0iBKTiMghuIo,5852
+fractal_server/app/runner/executors/slurm_common/get_slurm_config.py,sha256=-fAX1DZMB5RZnyYanIJD72mWOJAPkh21jd4loDXKJw4,5994
+fractal_server/app/runner/executors/slurm_common/remote.py,sha256=iXLu4d-bWzn7qmDaOjKFkcuaSHLjPESAMSLcg6c99fc,5852
 fractal_server/app/runner/executors/slurm_common/utils_executors.py,sha256=naPyJI0I3lD-sYHbSXbMFGUBK4h_SggA5V91Z1Ch1Xg,1416
 fractal_server/app/runner/executors/slurm_ssh/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 fractal_server/app/runner/executors/slurm_ssh/_executor_wait_thread.py,sha256=lnW8dNNPqqbpQvojVBQaNJm4wN3Qkw02RWBZ1w68Hyw,3755
@@ -97,14 +97,14 @@ fractal_server/app/runner/run_subprocess.py,sha256=c3JbYXq3hX2aaflQU19qJ5Xs6J6oX
 fractal_server/app/runner/set_start_and_last_task_index.py,sha256=-q4zVybAj8ek2XlbENKlfOAJ39hT_zoJoZkqzDqiAMY,1254
 fractal_server/app/runner/shutdown.py,sha256=9pfSKHDNdIcm0eY-opgRTi7y0HmvfPmYiu9JR6Idark,2082
 fractal_server/app/runner/task_files.py,sha256=5enzBqiQct1AUGwrGX-rxFCxnhW3SPYIUylMYwyVfrE,2482
-fractal_server/app/runner/v2/__init__.py,sha256=fExxP-EQEaXADncxX45DPG9GVlJNjKwnK9yBBjJFqGA,14245
+fractal_server/app/runner/v2/__init__.py,sha256=llVnhgNGsSuP_eZ_ilQixQTmwst79LWrgjILpC2Xn9o,14247
 fractal_server/app/runner/v2/_local.py,sha256=Zas2RS_f9mfdkXszBpzISHylLX1bX8pFuoLA1fHLFqQ,2945
-fractal_server/app/runner/v2/_slurm_ssh.py,sha256=6NzRy3Yp84DHhsRHie2NI_UXhhiAusY4nOdTYlhqJOw,3226
-fractal_server/app/runner/v2/_slurm_sudo.py,sha256=iQ_BwvS88sMzd1vAce_9MOjC8YzZq7rHx2YUpkVRWXQ,2913
+fractal_server/app/runner/v2/_slurm_ssh.py,sha256=5w_lwQzySx-R3kVg2Bf-21n5JpWjJAgMtYP2BROvWJo,3227
+fractal_server/app/runner/v2/_slurm_sudo.py,sha256=CzWUeC6at_Sj-wU1myjA68ZRKMiLZYBTLv9I9odUxBU,2914
 fractal_server/app/runner/v2/deduplicate_list.py,sha256=IVTE4abBU1bUprFTkxrTfYKnvkNTanWQ-KWh_etiT08,645
 fractal_server/app/runner/v2/merge_outputs.py,sha256=D1L4Taieq9i71SPQyNc1kMokgHh-sV_MqF3bv7QMDBc,907
-fractal_server/app/runner/v2/runner.py,sha256=YPzuo4QfXm9nVmZinF3qI1w1AlJwpZ1wVNboyhyTyU4,14456
-fractal_server/app/runner/v2/runner_functions.py,sha256=EBY64v0NC_fdgKUqZQqCp8XZtPbwVo21P1eXS6Y0AUc,10456
+fractal_server/app/runner/v2/runner.py,sha256=qtxmnrgMdlB3CA5Ayg7BXUv1yETR6H7kMLp70R1faSM,14456
+fractal_server/app/runner/v2/runner_functions.py,sha256=Zvi6sC5krltygLO-fC0K21VJEhmX1XQCm9IzVqf_cB0,9583
 fractal_server/app/runner/v2/runner_functions_low_level.py,sha256=dvvRK7od8iQ8vdPf80uGUxs3i5i0buGjCodBxSjZ7PQ,3671
 fractal_server/app/runner/v2/task_interface.py,sha256=e1GGQSYd0MyBj1EZvEVzqv-HpVE4YffXOq82WLrCaOc,1866
 fractal_server/app/runner/versions.py,sha256=dSaPRWqmFPHjg20kTCHmi_dmGNcCETflDtDLronNanU,852
@@ -120,7 +120,7 @@ fractal_server/app/schemas/v2/dataset.py,sha256=xo7Y3fq5ThMVBp6xDVypdG-EmGfBX_vW
 fractal_server/app/schemas/v2/dumps.py,sha256=2GUjoqeblUvrSoojBz5odoUUf53IABtbY_5GvFZoMVc,1782
 fractal_server/app/schemas/v2/history.py,sha256=OHwRIbOIjBiiTYUNZYsHTdEXJHff17JRizQ8pf1e0vk,601
 fractal_server/app/schemas/v2/job.py,sha256=Dp_RRiC5uvJqq1fAJlBXztAFA-tS5FWuRnUbTnLtL6M,4226
-fractal_server/app/schemas/v2/manifest.py,sha256=AhUkv3ZfoUffdcpHKOuUTmcZa-0G5Y53hp-O4UaTkG0,7133
+fractal_server/app/schemas/v2/manifest.py,sha256=tcCvT4PbdtpdC5eU54MKUne6puXpnPlIExZYwLGHEAo,7133
 fractal_server/app/schemas/v2/project.py,sha256=uqBreoS0UAkbVEJJS2HkSdjCCWfFIkv6N70TWk9HgxA,868
 fractal_server/app/schemas/v2/status.py,sha256=SQaUpQkjFq5c5k5J4rOjNhuQaDOEg8lksPhkKmPU5VU,332
 fractal_server/app/schemas/v2/task.py,sha256=OUCNQQUULmWSOdPm8Dz8E0ivG1XOcvO4dxz-osSa9R0,7248
@@ -128,10 +128,10 @@ fractal_server/app/schemas/v2/task_collection.py,sha256=NFIcfTAhFN5LMxmyJCat7CKx
 fractal_server/app/schemas/v2/task_group.py,sha256=vFF850kJRmmcxt2sn7nrhm-OWJHRhYu_XOQP5LNiXyU,3850
 fractal_server/app/schemas/v2/workflow.py,sha256=qmKJZ9xZ6-sN41XdocZ7K6hum_pUfaMuKOJs_TlFCRQ,2211
 fractal_server/app/schemas/v2/workflowtask.py,sha256=qMvwlnFCsnyD8uv8HJ4cFy2-QMm2ETUFlTIbxIFUWxk,8056
-fractal_server/app/security/__init__.py,sha256=8dg7vBzLjU43p_eGoHuFBO97FtIDtNnbJJ5mzVSVRNI,14094
+fractal_server/app/security/__init__.py,sha256=e2cveg5hQpieGD3bSPd5GTOMthvJ-HXH3buSb9WVfEU,14096
 fractal_server/app/security/signup_email.py,sha256=CR1VbsGFNshxsWquLDZPbUAYnGzkCHeJChtncq63RBc,1434
 fractal_server/app/user_settings.py,sha256=OP1yiYKtPadxwM51_Q0hdPk3z90TCN4z1BLpQsXyWiU,1316
-fractal_server/config.py,sha256=-ZcGmK-3tppIQCD13aKNSiom7u0XQgil_nis37HKjTA,28549
+fractal_server/config.py,sha256=eYo-c3Zt4rkC45mewLYOeFZSA_7FF4Wmm6zDvX1dpt4,28549
 fractal_server/data_migrations/README.md,sha256=_3AEFvDg9YkybDqCLlFPdDmGJvr6Tw7HRI14aZ3LOIw,398
 fractal_server/data_migrations/tools.py,sha256=LeMeASwYGtEqd-3wOLle6WARdTGAimoyMmRbbJl-hAM,572
 fractal_server/gunicorn_fractal.py,sha256=u6U01TLGlXgq1v8QmEpLih3QnsInZD7CqphgJ_GrGzc,1230
@@ -195,7 +195,7 @@ fractal_server/tasks/v2/ssh/reactivate.py,sha256=8Rnbbny7TjMEAHhboqfgxBVZZK5UNNm
 fractal_server/tasks/v2/templates/1_create_venv.sh,sha256=PK0jdHKtQpda1zULebBaVPORt4t6V17wa4N1ohcj5ac,548
 fractal_server/tasks/v2/templates/2_pip_install.sh,sha256=Gpk2io8u9YaflFUlQu2NgkDQw5AA4m4AOVG1sB4yrHQ,1822
 fractal_server/tasks/v2/templates/3_pip_freeze.sh,sha256=JldREScEBI4cD_qjfX4UK7V4aI-FnX9ZvVNxgpSOBFc,168
-fractal_server/tasks/v2/templates/4_pip_show.sh,sha256=84NGHlg6JIbrQktgGKyfGsggPFzy6RBJuOmIpPUhsrw,1747
+fractal_server/tasks/v2/templates/4_pip_show.sh,sha256=qm1vPy6AkKhWDjCJGXS8LqCLYO3KsAyRK325ZsFcF6U,1747
 fractal_server/tasks/v2/templates/5_get_venv_size_and_file_number.sh,sha256=q-6ZUvA6w6FDVEoSd9O63LaJ9tKZc7qAFH72SGPrd_k,284
 fractal_server/tasks/v2/templates/6_pip_install_from_freeze.sh,sha256=A2y8RngEjAcRhG-_owA6P7tAdrS_AszFuGXnaeMV8u0,1122
 fractal_server/tasks/v2/utils_background.py,sha256=W_RvihI1aiYPJNsPo8z4wKuA_bPs0UT2huzLihRpjU4,4248
@@ -206,8 +206,8 @@ fractal_server/tasks/v2/utils_templates.py,sha256=07TZpJ0Mh_A4lXVXrrH2o1VLFFGwxe
 fractal_server/urls.py,sha256=QjIKAC1a46bCdiPMu3AlpgFbcv6a4l3ABcd5xz190Og,471
 fractal_server/utils.py,sha256=PMwrxWFxRTQRl1b9h-NRIbFGPKqpH_hXnkAT3NfZdpY,3571
 fractal_server/zip_tools.py,sha256=GjDgo_sf6V_DDg6wWeBlZu5zypIxycn_l257p_YVKGc,4876
-fractal_server-2.14.0a2.dist-info/LICENSE,sha256=QKAharUuhxL58kSoLizKJeZE3mTCBnX6ucmz8W0lxlk,1576
-fractal_server-2.14.0a2.dist-info/METADATA,sha256=t9JaZ6P-FKFHdGcvOagYEK-agbJKuVojh4CiE6pdFRc,4550
-fractal_server-2.14.0a2.dist-info/WHEEL,sha256=RaoafKOydTQ7I_I3JTrPCg6kUmTgtm4BornzOqyEfJ8,88
-fractal_server-2.14.0a2.dist-info/entry_points.txt,sha256=8tV2kynvFkjnhbtDnxAqImL6HMVKsopgGfew0DOp5UY,58
-fractal_server-2.14.0a2.dist-info/RECORD,,
+fractal_server-2.14.0a3.dist-info/LICENSE,sha256=QKAharUuhxL58kSoLizKJeZE3mTCBnX6ucmz8W0lxlk,1576
+fractal_server-2.14.0a3.dist-info/METADATA,sha256=F2fjhacHy-6hFP43F8JNom4iV9-WNRiO6CiCye5KzLI,4550
+fractal_server-2.14.0a3.dist-info/WHEEL,sha256=RaoafKOydTQ7I_I3JTrPCg6kUmTgtm4BornzOqyEfJ8,88
+fractal_server-2.14.0a3.dist-info/entry_points.txt,sha256=8tV2kynvFkjnhbtDnxAqImL6HMVKsopgGfew0DOp5UY,58
+fractal_server-2.14.0a3.dist-info/RECORD,,