fractal-server 2.12.1__py3-none-any.whl → 2.13.1__py3-none-any.whl

fractal_server/migrations/versions/af1ef1c83c9b_add_accounting_tables.py

@@ -0,0 +1,57 @@
+"""Add accounting tables
+
+Revision ID: af1ef1c83c9b
+Revises: 1eac13a26c83
+Create Date: 2025-02-17 14:22:32.701581
+
+"""
+import sqlalchemy as sa
+from alembic import op
+from sqlalchemy.dialects import postgresql
+
+# revision identifiers, used by Alembic.
+revision = "af1ef1c83c9b"
+down_revision = "1eac13a26c83"
+branch_labels = None
+depends_on = None
+
+
+def upgrade() -> None:
+    # ### commands auto generated by Alembic - please adjust! ###
+    op.create_table(
+        "accountingrecord",
+        sa.Column("id", sa.Integer(), nullable=False),
+        sa.Column("user_id", sa.Integer(), nullable=False),
+        sa.Column("timestamp", sa.DateTime(timezone=True), nullable=False),
+        sa.Column("num_tasks", sa.Integer(), nullable=False),
+        sa.Column("num_new_images", sa.Integer(), nullable=False),
+        sa.ForeignKeyConstraint(
+            ["user_id"],
+            ["user_oauth.id"],
+            name=op.f("fk_accountingrecord_user_id_user_oauth"),
+        ),
+        sa.PrimaryKeyConstraint("id", name=op.f("pk_accountingrecord")),
+    )
+    op.create_table(
+        "accountingrecordslurm",
+        sa.Column("id", sa.Integer(), nullable=False),
+        sa.Column("user_id", sa.Integer(), nullable=False),
+        sa.Column("timestamp", sa.DateTime(timezone=True), nullable=False),
+        sa.Column(
+            "slurm_job_ids", postgresql.ARRAY(sa.Integer()), nullable=True
+        ),
+        sa.ForeignKeyConstraint(
+            ["user_id"],
+            ["user_oauth.id"],
+            name=op.f("fk_accountingrecordslurm_user_id_user_oauth"),
+        ),
+        sa.PrimaryKeyConstraint("id", name=op.f("pk_accountingrecordslurm")),
+    )
+    # ### end Alembic commands ###
+
+
+def downgrade() -> None:
+    # ### commands auto generated by Alembic - please adjust! ###
+    op.drop_table("accountingrecordslurm")
+    op.drop_table("accountingrecord")
+    # ### end Alembic commands ###

fractal_server/tasks/v2/utils_background.py

@@ -34,7 +34,7 @@ def fail_and_cleanup(
     db: DBSyncSession,
 ):
     logger = get_logger(logger_name)
-    logger.error(
+    logger.warning(
         f"Task {task_group_activity.action} failed. "
         f"Original error: {str(exception)}"
     )
@@ -106,7 +106,7 @@ def _prepare_tasks_metadata(
             ] = f"{python_bin.as_posix()} {parallel_path.as_posix()}"
         # Create object
         task_obj = TaskCreateV2(
-            **_task.dict(
+            **_task.model_dump(
                 exclude={
                     "executable_non_parallel",
                     "executable_parallel",

fractal_server/tasks/v2/utils_database.py

@@ -33,7 +33,7 @@ def create_db_tasks_and_update_task_group(
     """
     actual_task_list = [
         TaskV2(
-            **task.dict(),
+            **task.model_dump(),
             type=_get_task_type(task),
         )
         for task in task_list

{fractal_server-2.12.1.dist-info → fractal_server-2.13.1.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.3
 Name: fractal-server
-Version: 2.12.1
+Version: 2.13.1
 Summary: Backend component of the Fractal analytics platform
 Home-page: https://github.com/fractal-analytics-platform/fractal-server
 License: BSD-3-Clause
@@ -13,22 +13,21 @@ Classifier: Programming Language :: Python :: 3.10
 Classifier: Programming Language :: Python :: 3.11
 Classifier: Programming Language :: Python :: 3.12
 Requires-Dist: alembic (>=1.13.1,<2.0.0)
-Requires-Dist: cloudpickle (>=3.0.0,<3.1.0)
-Requires-Dist: clusterfutures (==0.5)
-Requires-Dist: cryptography (>=44.0.0,<44.1.0)
+Requires-Dist: cloudpickle (>=3.1.0,<3.2.0)
+Requires-Dist: cryptography (>=44.0.1,<44.1.0)
 Requires-Dist: fabric (>=3.2.2,<3.3.0)
 Requires-Dist: fastapi (>=0.115.0,<0.116.0)
 Requires-Dist: fastapi-users[oauth] (>=14,<15)
-Requires-Dist: gunicorn (>=21.2,<23.0)
-Requires-Dist: packaging (>=23.2.0,<24.0.0)
-Requires-Dist: psutil (==5.9.8)
+Requires-Dist: gunicorn (>=23.0,<24.0)
+Requires-Dist: packaging (>=24.0.0,<25.0.0)
 Requires-Dist: psycopg[binary] (>=3.1.0,<4.0.0)
-Requires-Dist: pydantic (>=1.10.8,<2)
+Requires-Dist: pydantic (>=2.10.0,<2.11.0)
+Requires-Dist: pydantic-settings (>=2.7.0)
 Requires-Dist: python-dotenv (>=1.0.0,<1.1.0)
 Requires-Dist: sqlalchemy[asyncio] (>=2.0.23,<2.1)
-Requires-Dist: sqlmodel (==0.0.21)
+Requires-Dist: sqlmodel (==0.0.22)
 Requires-Dist: uvicorn (>=0.29.0,<0.35.0)
-Requires-Dist: uvicorn-worker (==0.2.0)
+Requires-Dist: uvicorn-worker (==0.3.0)
 Project-URL: Documentation, https://fractal-analytics-platform.github.io/fractal-server
 Project-URL: Repository, https://github.com/fractal-analytics-platform/fractal-server
 Project-URL: changelog, https://github.com/fractal-analytics-platform/fractal-server/blob/main/CHANGELOG.md

{fractal_server-2.12.1.dist-info → fractal_server-2.13.1.dist-info}/RECORD

@@ -1,4 +1,4 @@
-fractal_server/__init__.py,sha256=xmnpQEc5CF2JQ6rKqQzxa_0Lpy_QA2cHgLGOu73fTGo,23
+fractal_server/__init__.py,sha256=RVVgvOrf56lXdkkOitLzI3TL2D6aaRZrlU-iLjRWJ7w,23
 fractal_server/__main__.py,sha256=igfS2XL3e8JycuhASl2vsYuIPma0MG0cfPPFRuQfh14,6906
 fractal_server/alembic.ini,sha256=MWwi7GzjzawI9cCAK1LW7NxIBQDUqD12-ptJoq5JpP0,3153
 fractal_server/app/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
@@ -6,74 +6,78 @@ fractal_server/app/db/__init__.py,sha256=wup2wcOkyOh8Vd0Xm76PZn_naxeMqaL4eF8DHHX
 fractal_server/app/models/__init__.py,sha256=xJWiGAwpXmCpnFMC4c_HTqoUCzMOXrakoGLUH_uMvdA,415
 fractal_server/app/models/linkusergroup.py,sha256=LWTUfhH2uAnn_4moK7QdRUIHWtpw-hPZuW-5jClv_OE,610
 fractal_server/app/models/linkuserproject.py,sha256=hvaxh3Lkiy2uUCwB8gvn8RorCpvxSSdzWdCS_U1GL7g,315
-fractal_server/app/models/security.py,sha256=kLvarGwG1CxvtbpV2HkkOobzHU5Ia0PHyNzHghKSEx4,3751
+fractal_server/app/models/security.py,sha256=mMb_HiwWY74QZrs9xuyno0CVSmk4GYQWk5FxGixr8SU,3860
 fractal_server/app/models/user_settings.py,sha256=Y-ZV-uZAFLZqXxy8c5_Qeh_F7zQuZDWOgLpU6Zs6iqU,1316
-fractal_server/app/models/v2/__init__.py,sha256=63THGEZQlxWcosGCI74SEvJU7wOoOn1j1byTjf4NFOI,526
-fractal_server/app/models/v2/dataset.py,sha256=RuqTHXWEgs4A3OSk8Pq9DTq9Xr7w1IJNnyXhOzrDiR0,1509
-fractal_server/app/models/v2/job.py,sha256=BMmu5oXdZvN7jEIAMZvQMB3PQBcCYzxn6Qm6HdRWre4,1725
+fractal_server/app/models/v2/__init__.py,sha256=TvY6VBvRG0XEfayCFNeaDxi0SZX_-rGPSvkoctl7wNM,666
+fractal_server/app/models/v2/accounting.py,sha256=f2ALxfKKBNxFLJTtC2-YqRepVK253x68y7zkD2V_Nls,1115
+fractal_server/app/models/v2/dataset.py,sha256=O5_6YfNeX6JM7PUcEZhbeV4JCvuAhFCQbOOuefpVnqc,1544
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 fractal_server/app/models/v2/project.py,sha256=rAHoh5KfYwIaW7rTX0_O0jvWmxEvfo1BafvmcXuSSRk,786
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 fractal_server/app/models/v2/workflow.py,sha256=YBgFGCziUgU0aJ5EM3Svu9W2c46AewZO9VBlFCHiSps,1069
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 fractal_server/app/routes/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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 fractal_server/app/routes/api/v2/job.py,sha256=m89FTh9Px25oXCeWj2k2NdGWQaO2oxMh-6lZppcsJOY,5551
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 fractal_server/app/routes/auth/__init__.py,sha256=fao6CS0WiAjHDTvBzgBVV_bSXFpEAeDBF6Z6q7rRkPc,1658
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 fractal_server/app/routes/auth/login.py,sha256=tSu6OBLOieoBtMZB4JkBAdEgH2Y8KqPGSbwy7NIypIo,566
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 fractal_server/app/runner/compress_folder.py,sha256=HSc1tv7x2DBjBoXwugZlC79rm9GNBIWtQKK9yWn5ZBI,3991
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 fractal_server/app/runner/executors/slurm/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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 fractal_server/app/runner/executors/slurm/remote.py,sha256=wLziIsGdSMiO-jIXM8x77JRK82g_2hx0iBKTiMghuIo,5852
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-fractal_server/app/runner/executors/slurm/sudo/_executor_wait_thread.py,sha256=uRRyVHQtK9McHCB6OsjYfDnQsu2E8At9K_UYb_pe2pg,4682
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+fractal_server/app/runner/executors/slurm/ssh/_executor_wait_thread.py,sha256=RsksZxMX41WCB53EfDj6Q34k61hv6raKJwCbmCs2OvM,3746
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+fractal_server/app/runner/executors/slurm/ssh/executor.py,sha256=CKdmm-jlInZ0B5oZZalYKIO0_qoBRm_SOlGkY8wgfyI,53658
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+fractal_server/app/runner/executors/slurm/sudo/_executor_wait_thread.py,sha256=UiuONKeIwT7U7Ne68mOhlndb7MD2aHEuXzGd2zpdMrU,4062
 fractal_server/app/runner/executors/slurm/sudo/_subprocess_run_as_user.py,sha256=g8wqUjSicN17UZVXlfaMomYZ-xOIbBu1oE7HdJTzfvw,5218
-fractal_server/app/runner/executors/slurm/sudo/executor.py,sha256=Z5lcyXOr9LNz1yFEHlu7StAIpZdK2BkiUZbX6Fh7QVY,48513
+fractal_server/app/runner/executors/slurm/sudo/executor.py,sha256=3V0u3d5IMDoVSxkk76FVz7857iix1Sfi2VVi6aI2O5U,48559
 fractal_server/app/runner/executors/slurm/utils_executors.py,sha256=naPyJI0I3lD-sYHbSXbMFGUBK4h_SggA5V91Z1Ch1Xg,1416
 fractal_server/app/runner/extract_archive.py,sha256=tLpjDrX47OjTNhhoWvm6iNukg8KoieWyTb7ZfvE9eWU,2483
 fractal_server/app/runner/filenames.py,sha256=lPnxKHtdRizr6FqG3zOdjDPyWA7GoaJGTtiuJV0gA8E,70
@@ -81,59 +85,56 @@ fractal_server/app/runner/run_subprocess.py,sha256=c3JbYXq3hX2aaflQU19qJ5Xs6J6oX
 fractal_server/app/runner/set_start_and_last_task_index.py,sha256=-q4zVybAj8ek2XlbENKlfOAJ39hT_zoJoZkqzDqiAMY,1254
 fractal_server/app/runner/shutdown.py,sha256=9pfSKHDNdIcm0eY-opgRTi7y0HmvfPmYiu9JR6Idark,2082
 fractal_server/app/runner/task_files.py,sha256=sd_MpJ01C8c9QTO8GzGMidFGdlq_hXX_ARDRhd_YMnI,3762
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-fractal_server/app/runner/v2/_local/__init__.py,sha256=QnQ9jfqpzShzjp6H7rfVx9Sqp03J1JB6fCpwNx2MDOw,5119
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+fractal_server/app/runner/v2/__init__.py,sha256=Qa2HsdtFfFNCUsKPhDPwjoy5jRpDlIWeraLYsF0ytsY,14855
+fractal_server/app/runner/v2/_local/__init__.py,sha256=URU4bQIFfTEJLJnp4iJLkyGDLKha1wkhskajNmLQfd4,5183
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 fractal_server/app/runner/v2/_local/_submit_setup.py,sha256=MucNOo8Er0F5ZIwH7CnTeXgnFMc6d3pKPkv563QNVi0,1630
 fractal_server/app/runner/v2/_local/executor.py,sha256=QrJlD77G6q4WohoJQO7XXbvi2RlCUsNvMnPDEZIoAqA,3620
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-fractal_server/app/runner/v2/_local_experimental/_submit_setup.py,sha256=we7r-sQf0CJ9gxbfbgHcYdC6pKjx8eXweljIjthxkv8,1212
-fractal_server/app/runner/v2/_local_experimental/executor.py,sha256=plvEqqdcXOSohYsQoykYlyDwCING7OO5h-4XAZtwdPs,5503
 fractal_server/app/runner/v2/_slurm_common/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-fractal_server/app/runner/v2/_slurm_common/get_slurm_config.py,sha256=UdkoFF0HF_TdKbay-d9bjkxT2ltcOE5i8H_FoOu64HU,6202
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 fractal_server/app/runner/v2/_slurm_ssh/_submit_setup.py,sha256=a5_FDPH_yxYmrjAjMRLgh_Y4DSG3mRslCLQodGM3-t4,2838
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 fractal_server/app/runner/v2/_slurm_sudo/_submit_setup.py,sha256=a5_FDPH_yxYmrjAjMRLgh_Y4DSG3mRslCLQodGM3-t4,2838
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 fractal_server/app/runner/v2/handle_failed_job.py,sha256=-zFWw4d208bQEFUF_sAdH2LdHEARyg1FC8BENr1SjhU,2045
 fractal_server/app/runner/v2/merge_outputs.py,sha256=D1L4Taieq9i71SPQyNc1kMokgHh-sV_MqF3bv7QMDBc,907
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 fractal_server/app/runner/v2/runner_functions_low_level.py,sha256=1fWvQ6YZUUnDhO_mipXC5hnaT-zK-GHxg8ayoxZX82k,3648
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 fractal_server/app/runner/versions.py,sha256=dSaPRWqmFPHjg20kTCHmi_dmGNcCETflDtDLronNanU,852
 fractal_server/app/schemas/__init__.py,sha256=stURAU_t3AOBaH0HSUbV-GKhlPKngnnIMoqWc3orFyI,135
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 fractal_server/app/schemas/v2/status.py,sha256=SQaUpQkjFq5c5k5J4rOjNhuQaDOEg8lksPhkKmPU5VU,332
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 fractal_server/app/security/signup_email.py,sha256=CR1VbsGFNshxsWquLDZPbUAYnGzkCHeJChtncq63RBc,1434
 fractal_server/app/user_settings.py,sha256=OP1yiYKtPadxwM51_Q0hdPk3z90TCN4z1BLpQsXyWiU,1316
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 fractal_server/data_migrations/README.md,sha256=_3AEFvDg9YkybDqCLlFPdDmGJvr6Tw7HRI14aZ3LOIw,398
 fractal_server/data_migrations/tools.py,sha256=LeMeASwYGtEqd-3wOLle6WARdTGAimoyMmRbbJl-hAM,572
 fractal_server/gunicorn_fractal.py,sha256=u6U01TLGlXgq1v8QmEpLih3QnsInZD7CqphgJ_GrGzc,1230
 fractal_server/images/__init__.py,sha256=-_wjoKtSX02P1KjDxDP_EXKvmbONTRmbf7iGVTsyBpM,154
-fractal_server/images/models.py,sha256=t4zcUFmWxhAzGgy7kkxs9Ctq8SAhVs0v910UcXcHIUw,3349
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 fractal_server/images/tools.py,sha256=4kfPAFJJnvg7fM-cL0JMx97Dc1Npva_0ghitEji3JUU,3407
 fractal_server/logger.py,sha256=5Z3rfsFwl8UysVljTOaaIvt8Pyp6CVH492ez3jE8WAw,5113
-fractal_server/main.py,sha256=yziIqi9AaecYYx9hVsaB5nzSpsgnOSSMvQOa0n30SBI,4555
+fractal_server/main.py,sha256=FD9KzTTsXTQnTW0z3Hu7y0Nj_oAkBeZEInKDXFd4hjE,4561
 fractal_server/migrations/env.py,sha256=nfyBpMIOT3kny6t-b-tUjyRjZ4k906bb1_wCQ7me1BI,1353
 fractal_server/migrations/naming_convention.py,sha256=htbKrVdetx3pklowb_9Cdo5RqeF0fJ740DNecY5de_M,265
 fractal_server/migrations/versions/034a469ec2eb_task_groups.py,sha256=vrPhC8hfFu1c4HmLHNZyCuqEfecFD8-bWc49bXMNes0,6199
@@ -157,6 +158,7 @@ fractal_server/migrations/versions/99ea79d9e5d2_add_dataset_history.py,sha256=0i
 fractal_server/migrations/versions/9c5ae74c9b98_add_user_settings_table.py,sha256=syONdZNf4-OnAcWIsbzXpYwpXPsXZ4SsmjwVvmVG0PU,2256
 fractal_server/migrations/versions/9fd26a2b0de4_add_workflow_timestamp_created.py,sha256=4l1AHGUsa0ONoJVZlr3fTXw_xbbQ8O7wlD92Az2aRfM,1849
 fractal_server/migrations/versions/a7f4d6137b53_add_workflow_dump_to_applyworkflow.py,sha256=ekDUML7ILpmdoqEclKbEUdyLi4uw9HSG_sTjG2hp_JE,867
+fractal_server/migrations/versions/af1ef1c83c9b_add_accounting_tables.py,sha256=BftudWuSGvKGBzIL5AMb3yWkgTAuaKPBGsYcOzp_gLQ,1899
 fractal_server/migrations/versions/af8673379a5c_drop_old_filter_columns.py,sha256=9sLd0F7nO5chHHm7RZ4wBA-9bvWomS-av_odKwODADM,1551
 fractal_server/migrations/versions/d256a7379ab8_taskgroup_activity_and_venv_info_to_.py,sha256=HN3_Pk8G81SzdYjg4K1RZAyjKSlsZGvcYE2nWOUbwxQ,3861
 fractal_server/migrations/versions/d4fe3708d309_make_applyworkflow_workflow_dump_non_.py,sha256=6cHEZFuTXiQg9yu32Y3RH1XAl71av141WQ6UMbiITIg,949
@@ -189,16 +191,16 @@ fractal_server/tasks/v2/templates/3_pip_freeze.sh,sha256=JldREScEBI4cD_qjfX4UK7V
 fractal_server/tasks/v2/templates/4_pip_show.sh,sha256=84NGHlg6JIbrQktgGKyfGsggPFzy6RBJuOmIpPUhsrw,1747
 fractal_server/tasks/v2/templates/5_get_venv_size_and_file_number.sh,sha256=q-6ZUvA6w6FDVEoSd9O63LaJ9tKZc7qAFH72SGPrd_k,284
 fractal_server/tasks/v2/templates/6_pip_install_from_freeze.sh,sha256=A2y8RngEjAcRhG-_owA6P7tAdrS_AszFuGXnaeMV8u0,1122
-fractal_server/tasks/v2/utils_background.py,sha256=tikXhggqxdU7EnKdx2co3UwinlDazEjfOPQOXtO58zs,4240
-fractal_server/tasks/v2/utils_database.py,sha256=g5m3sNPZKQ3AjflhPURDlAppQcIS5T1A8a1macdswBA,1268
+fractal_server/tasks/v2/utils_background.py,sha256=W_RvihI1aiYPJNsPo8z4wKuA_bPs0UT2huzLihRpjU4,4248
+fractal_server/tasks/v2/utils_database.py,sha256=iLbwkxMxTCgpyKe1JQzdfIR3zBfxohgmLwSdGps1AUo,1274
 fractal_server/tasks/v2/utils_package_names.py,sha256=RDg__xrvQs4ieeVzmVdMcEh95vGQYrv9Hfal-5EDBM8,2393
 fractal_server/tasks/v2/utils_python_interpreter.py,sha256=5_wrlrTqXyo1YuLZvAW9hrSoh5MyLOzdPVUlUwM7uDQ,955
 fractal_server/tasks/v2/utils_templates.py,sha256=07TZpJ0Mh_A4lXVXrrH2o1VLFFGwxeRumA6DdgMgCWk,2947
 fractal_server/urls.py,sha256=QjIKAC1a46bCdiPMu3AlpgFbcv6a4l3ABcd5xz190Og,471
 fractal_server/utils.py,sha256=PMwrxWFxRTQRl1b9h-NRIbFGPKqpH_hXnkAT3NfZdpY,3571
 fractal_server/zip_tools.py,sha256=GjDgo_sf6V_DDg6wWeBlZu5zypIxycn_l257p_YVKGc,4876
-fractal_server-2.12.1.dist-info/LICENSE,sha256=QKAharUuhxL58kSoLizKJeZE3mTCBnX6ucmz8W0lxlk,1576
-fractal_server-2.12.1.dist-info/METADATA,sha256=m7gJftwPSx3KP-HzIgYY_4a7m8zs-I8yGuQlW_HedKE,4570
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-fractal_server-2.12.1.dist-info/entry_points.txt,sha256=8tV2kynvFkjnhbtDnxAqImL6HMVKsopgGfew0DOp5UY,58
-fractal_server-2.12.1.dist-info/RECORD,,
+fractal_server-2.13.1.dist-info/LICENSE,sha256=QKAharUuhxL58kSoLizKJeZE3mTCBnX6ucmz8W0lxlk,1576
+fractal_server-2.13.1.dist-info/METADATA,sha256=xWwzGuagIVtTBtHUpvpmo3jk5NPwmDq71eZgGrKnYjI,4548
+fractal_server-2.13.1.dist-info/WHEEL,sha256=RaoafKOydTQ7I_I3JTrPCg6kUmTgtm4BornzOqyEfJ8,88
+fractal_server-2.13.1.dist-info/entry_points.txt,sha256=8tV2kynvFkjnhbtDnxAqImL6HMVKsopgGfew0DOp5UY,58
+fractal_server-2.13.1.dist-info/RECORD,,

fractal_server/app/runner/v2/_local_experimental/__init__.py

@@ -1,121 +0,0 @@
-from concurrent.futures.process import BrokenProcessPool
-from pathlib import Path
-from typing import Optional
-
-from ....models.v2 import DatasetV2
-from ....models.v2 import WorkflowV2
-from ...exceptions import JobExecutionError
-from ...filenames import SHUTDOWN_FILENAME
-from ...set_start_and_last_task_index import set_start_and_last_task_index
-from ..runner import execute_tasks_v2
-from ._submit_setup import _local_submit_setup
-from .executor import FractalProcessPoolExecutor
-from fractal_server.images.models import AttributeFiltersType
-
-
-def process_workflow(
-    *,
-    workflow: WorkflowV2,
-    dataset: DatasetV2,
-    workflow_dir_local: Path,
-    workflow_dir_remote: Optional[Path] = None,
-    first_task_index: Optional[int] = None,
-    last_task_index: Optional[int] = None,
-    logger_name: str,
-    job_attribute_filters: AttributeFiltersType,
-    # Slurm-specific
-    user_cache_dir: Optional[str] = None,
-    slurm_user: Optional[str] = None,
-    slurm_account: Optional[str] = None,
-    worker_init: Optional[str] = None,
-) -> None:
-    """
-    Run a workflow
-
-    This function is responsible for running a workflow on some input data,
-    saving the output and taking care of any exception raised during the run.
-
-    NOTE: This is the `local_experimental` backend's public interface,
-    which also works as a reference implementation for other backends.
-
-    Args:
-        workflow:
-            The workflow to be run
-        dataset:
-            Initial dataset.
-        workflow_dir_local:
-            Working directory for this run.
-        workflow_dir_remote:
-            Working directory for this run, on the user side. This argument is
-            present for compatibility with the standard backend interface, but
-            for the `local` backend it cannot be different from
-            `workflow_dir_local`.
-        first_task_index:
-            Positional index of the first task to execute; if `None`, start
-            from `0`.
-        last_task_index:
-            Positional index of the last task to execute; if `None`, proceed
-            until the last task.
-        logger_name: Logger name
-        slurm_user:
-            Username to impersonate to run the workflow. This argument is
-            present for compatibility with the standard backend interface, but
-            is ignored in the `local` backend.
-        slurm_account:
-            SLURM account to use when running the workflow. This argument is
-            present for compatibility with the standard backend interface, but
-            is ignored in the `local` backend.
-        user_cache_dir:
-            Cache directory of the user who will run the workflow. This
-            argument is present for compatibility with the standard backend
-            interface, but is ignored in the `local` backend.
-        worker_init:
-            Any additional, usually backend specific, information to be passed
-            to the backend executor. This argument is present for compatibility
-            with the standard backend interface, but is ignored in the `local`
-            backend.
-
-    Raises:
-        TaskExecutionError: wrapper for errors raised during tasks' execution
-                            (positive exit codes).
-        JobExecutionError: wrapper for errors raised by the tasks' executors
-                           (negative exit codes).
-    """
-
-    if workflow_dir_remote and (workflow_dir_remote != workflow_dir_local):
-        raise NotImplementedError(
-            "LocalExperimental backend does not support different directories "
-            f"{workflow_dir_local=} and {workflow_dir_remote=}"
-        )
-
-    # Set values of first_task_index and last_task_index
-    num_tasks = len(workflow.task_list)
-    first_task_index, last_task_index = set_start_and_last_task_index(
-        num_tasks,
-        first_task_index=first_task_index,
-        last_task_index=last_task_index,
-    )
-
-    with FractalProcessPoolExecutor(
-        shutdown_file=workflow_dir_local / SHUTDOWN_FILENAME
-    ) as executor:
-        try:
-            execute_tasks_v2(
-                wf_task_list=workflow.task_list[
-                    first_task_index : (last_task_index + 1)
-                ],
-                dataset=dataset,
-                executor=executor,
-                workflow_dir_local=workflow_dir_local,
-                workflow_dir_remote=workflow_dir_local,
-                logger_name=logger_name,
-                submit_setup_call=_local_submit_setup,
-                job_attribute_filters=job_attribute_filters,
-            )
-        except BrokenProcessPool as e:
-            raise JobExecutionError(
-                info=(
-                    "Job failed with BrokenProcessPool error, likely due to "
-                    f"an executor shutdown.\nOriginal error:\n{e.args[0]}"
-                )
-            )

fractal_server/app/runner/v2/_local_experimental/_local_config.py

@@ -1,108 +0,0 @@
-"""
-Submodule to handle the local-backend configuration for a WorkflowTask
-"""
-import json
-from pathlib import Path
-from typing import Literal
-from typing import Optional
-
-from pydantic import BaseModel
-from pydantic import Extra
-from pydantic.error_wrappers import ValidationError
-
-from .....config import get_settings
-from .....syringe import Inject
-from ....models.v2 import WorkflowTaskV2
-
-
-class LocalBackendConfigError(ValueError):
-    """
-    Local-backend configuration error
-    """
-
-    pass
-
-
-class LocalBackendConfig(BaseModel, extra=Extra.forbid):
-    """
-    Specifications of the local-backend configuration
-
-    Attributes:
-        parallel_tasks_per_job:
-            Maximum number of tasks to be run in parallel as part of a call to
-            `FractalProcessPoolExecutor.map`; if `None`, then all tasks will
-            start at the same time.
-    """
-
-    parallel_tasks_per_job: Optional[int]
-
-
-def get_default_local_backend_config():
-    """
-    Return a default `LocalBackendConfig` configuration object
-    """
-    return LocalBackendConfig(parallel_tasks_per_job=None)
-
-
-def get_local_backend_config(
-    wftask: WorkflowTaskV2,
-    which_type: Literal["non_parallel", "parallel"],
-    config_path: Optional[Path] = None,
-) -> LocalBackendConfig:
-    """
-    Prepare a `LocalBackendConfig` configuration object
-
-    The sources for `parallel_tasks_per_job` attributes, starting from the
-    highest-priority one, are
-
-    1. Properties in `wftask.meta_parallel` or `wftask.meta_non_parallel`
-       (depending on `which_type`);
-    2. The general content of the local-backend configuration file;
-    3. The default value (`None`).
-
-    Arguments:
-        wftask:
-            WorkflowTaskV2 for which the backend configuration should
-            be prepared.
-        config_path:
-            Path of local-backend configuration file; if `None`, use
-            `FRACTAL_LOCAL_CONFIG_FILE` variable from settings.
-
-    Returns:
-        A local-backend configuration object
-    """
-
-    key = "parallel_tasks_per_job"
-    default_value = None
-
-    if which_type == "non_parallel":
-        wftask_meta = wftask.meta_non_parallel
-    elif which_type == "parallel":
-        wftask_meta = wftask.meta_parallel
-    else:
-        raise ValueError(
-            "`get_local_backend_config` received an invalid argument"
-            f" {which_type=}."
-        )
-
-    if wftask_meta and key in wftask_meta:
-        parallel_tasks_per_job = wftask_meta[key]
-    else:
-        if not config_path:
-            settings = Inject(get_settings)
-            config_path = settings.FRACTAL_LOCAL_CONFIG_FILE
-        if config_path is None:
-            parallel_tasks_per_job = default_value
-        else:
-            with config_path.open("r") as f:
-                env = json.load(f)
-            try:
-                _ = LocalBackendConfig(**env)
-            except ValidationError as e:
-                raise LocalBackendConfigError(
-                    f"Error while loading {config_path=}. "
-                    f"Original error:\n{str(e)}"
-                )
-
-            parallel_tasks_per_job = env.get(key, default_value)
-    return LocalBackendConfig(parallel_tasks_per_job=parallel_tasks_per_job)