flowgraph 0.1.2__py3-none-any.whl

flowgraph/testdata/AllFilters.json

@@ -0,0 +1,390 @@
+{
+  "edges": [
+    {
+      "source_node": "set-list[str]-1",
+      "source_port": "value",
+      "target_node": "load-csv-2",
+      "target_port": "value"
+    },
+    {
+      "source_node": "load-csv-2",
+      "source_port": "mesh",
+      "target_node": "filter-mesh-muscat-3",
+      "target_port": "mesh"
+    },
+    {
+      "source_node": "create-muscat-element-filter-4",
+      "source_port": "filter",
+      "target_node": "filter-mesh-muscat-3",
+      "target_port": "filter"
+    },
+    {
+      "source_node": "set-string-7",
+      "source_port": "value",
+      "target_node": "load-csv-1",
+      "target_port": "path"
+    },
+    {
+      "source_node": "load-csv-1",
+      "source_port": "table",
+      "target_node": "load-csv-2",
+      "target_port": "table"
+    },
+    {
+      "source_node": "select-file-7",
+      "source_port": "path",
+      "target_node": "load-muscat",
+      "target_port": "path"
+    },
+    {
+      "source_node": "select-file-7",
+      "source_port": "path",
+      "target_node": "load-meshio-10",
+      "target_port": "path"
+    },
+    {
+      "source_node": "filter-mesh-muscat-3",
+      "source_port": "mesh",
+      "target_node": "write-muscat-12",
+      "target_port": "mesh"
+    },
+    {
+      "source_node": "set-string-15",
+      "source_port": "value",
+      "target_node": "write-muscat-12",
+      "target_port": "path"
+    },
+    {
+      "source_node": "Output File Name",
+      "source_port": "value",
+      "target_node": "write-meshio-13",
+      "target_port": "path"
+    },
+    {
+      "source_node": "load-muscat",
+      "source_port": "mesh",
+      "target_node": "write-meshio-13",
+      "target_port": "mesh"
+    },
+    {
+      "source_node": "load-muscat",
+      "source_port": "mesh",
+      "target_node": "mesh-sink-9",
+      "target_port": "mesh"
+    },
+    {
+      "source_node": "select-server-file_1",
+      "source_port": "path",
+      "target_node": "select-file-7",
+      "target_port": "path"
+    },
+    {
+      "source_node": "load-csv-2",
+      "source_port": "mesh",
+      "target_node": "delaunay-3d_1",
+      "target_port": "meshDocument"
+    },
+    {
+      "source_node": "delaunay-3d_1",
+      "source_port": "meshDocument",
+      "target_node": "mesh-sink-5",
+      "target_port": "mesh"
+    }
+  ],
+  "format": "flowgraph-workflow",
+  "nodes": [
+    {
+      "definition_id": "load-muscat",
+      "id": "load-muscat",
+      "parameters": {},
+      "position": {
+        "x": -49.71284722813971,
+        "y": 448.4093703781832
+      }
+    },
+    {
+      "definition_id": "set-list[str]",
+      "id": "set-list[str]-1",
+      "parameters": {
+        "value": "['Points_0','Points_1','Points_2']"
+      },
+      "position": {
+        "x": -390.29208936126156,
+        "y": -142.6570986112609
+      }
+    },
+    {
+      "definition_id": "csv-to-mesh",
+      "id": "load-csv-2",
+      "parameters": {},
+      "position": {
+        "x": 387.3368913208138,
+        "y": -632.6821670740044
+      }
+    },
+    {
+      "definition_id": "filter-mesh-muscat",
+      "id": "filter-mesh-muscat-3",
+      "parameters": {},
+      "position": {
+        "x": 1178.7934386432692,
+        "y": -404.60420766087486
+      }
+    },
+    {
+      "definition_id": "create-muscat-element-filter",
+      "id": "create-muscat-element-filter-4",
+      "parameters": {
+        "dimensions": [],
+        "element_types": []
+      },
+      "position": {
+        "x": 907.0145916208401,
+        "y": -638.2472795858114
+      }
+    },
+    {
+      "definition_id": "mesh-sink",
+      "id": "mesh-sink-5",
+      "parameters": {
+        "color_field": "",
+        "show_representation": true
+      },
+      "position": {
+        "x": 2239.785006293307,
+        "y": -432.72359397606726
+      }
+    },
+    {
+      "definition_id": "set-string",
+      "id": "set-string-7",
+      "parameters": {
+        "value": "{testdata}/SpherePoints.csv"
+      },
+      "position": {
+        "x": -393.10668439247513,
+        "y": -628.4541569226008
+      }
+    },
+    {
+      "definition_id": "load-csv",
+      "id": "load-csv-1",
+      "parameters": {},
+      "position": {
+        "x": -44.83132041511465,
+        "y": -627.3162867737778
+      }
+    },
+    {
+      "definition_id": "set-int",
+      "id": "set-int-1",
+      "parameters": {
+        "value": 0
+      },
+      "position": {
+        "x": -394,
+        "y": -468
+      }
+    },
+    {
+      "definition_id": "set-float",
+      "id": "set-float-3",
+      "parameters": {
+        "value": 0.0
+      },
+      "position": {
+        "x": -394,
+        "y": -306
+      }
+    },
+    {
+      "definition_id": "set-list[int]",
+      "id": "set-list[int]-5",
+      "parameters": {
+        "value": []
+      },
+      "position": {
+        "x": -390,
+        "y": 192
+      }
+    },
+    {
+      "definition_id": "set-list[float]",
+      "id": "set-list[float]-6",
+      "parameters": {
+        "value": []
+      },
+      "position": {
+        "x": -390,
+        "y": 358
+      }
+    },
+    {
+      "definition_id": "select-file",
+      "id": "select-file-7",
+      "parameters": {
+        "path": "{testdata}/FlowGraph.stl"
+      },
+      "position": {
+        "x": -390,
+        "y": 528
+      }
+    },
+    {
+      "definition_id": "mesh-sink",
+      "id": "mesh-sink-9",
+      "parameters": {},
+      "position": {
+        "x": 1916,
+        "y": 542
+      }
+    },
+    {
+      "definition_id": "load-meshio",
+      "id": "load-meshio-10",
+      "parameters": {},
+      "position": {
+        "x": -39.70284566640166,
+        "y": 639.1967967865925
+      }
+    },
+    {
+      "definition_id": "write-muscat",
+      "id": "write-muscat-12",
+      "parameters": {},
+      "position": {
+        "x": 1806.8227820321258,
+        "y": -658.8482283355717
+      }
+    },
+    {
+      "definition_id": "write-meshio",
+      "id": "write-meshio-13",
+      "parameters": {},
+      "position": {
+        "x": 1775.790050141856,
+        "y": -266.0219053905259
+      }
+    },
+    {
+      "definition_id": "set-string",
+      "id": "set-string-15",
+      "parameters": {
+        "value": "MuscatFiltered.xdmf"
+      },
+      "position": {
+        "x": 1360.6079441839063,
+        "y": -853.8432526815529
+      }
+    },
+    {
+      "definition_id": "select-server-file",
+      "id": "select-server-file_1",
+      "parameters": {
+        "file name": "{testdata}/FlowGraph.stl"
+      },
+      "position": {
+        "x": -742,
+        "y": 530.2308349609375
+      }
+    },
+    {
+      "definition_id": "title-doc",
+      "id": "title-doc_4",
+      "parameters": {
+        "title": "These are the sources"
+      },
+      "position": {
+        "x": -412.3486819477766,
+        "y": -834
+      }
+    },
+    {
+      "definition_id": "title-doc",
+      "id": "title-doc_5",
+      "parameters": {
+        "title": "Mesh and Table Readers"
+      },
+      "position": {
+        "x": -50,
+        "y": -734
+      }
+    },
+    {
+      "definition_id": "title-doc",
+      "id": "title-doc_6",
+      "parameters": {
+        "title": "Mesh Generation"
+      },
+      "position": {
+        "x": 394,
+        "y": -730
+      }
+    },
+    {
+      "definition_id": "title-doc",
+      "id": "title-doc_7",
+      "parameters": {
+        "title": "Mesh Filters"
+      },
+      "position": {
+        "x": 912,
+        "y": -737.7500000000001
+      }
+    },
+    {
+      "definition_id": "title-doc",
+      "id": "title-doc_8",
+      "parameters": {
+        "title": "Sinks"
+      },
+      "position": {
+        "x": 2276,
+        "y": -742
+      }
+    },
+    {
+      "definition_id": "title-doc",
+      "id": "title-doc_9",
+      "parameters": {
+        "title": "Writers"
+      },
+      "position": {
+        "x": 1838.0000000000002,
+        "y": -741.2500000000001
+      }
+    },
+    {
+      "definition_id": "set-string",
+      "id": "Output File Name",
+      "parameters": {
+        "value": "MeshIO_Unfiltered.xdmf"
+      },
+      "position": {
+        "x": -392.7183954606096,
+        "y": 22.18771524529342
+      }
+    },
+    {
+      "definition_id": "paragraph-doc",
+      "id": "paragraph-doc_1",
+      "parameters": {
+        "text": "This is a **bold** word, this is an *italic* word, and this is ***bold and italic***.\n\n- First bullet\n- Second bullet with **bold text**\n- Third bullet with *italic text*\n- Fourth bullet with ***bold italic text***"
+      },
+      "position": {
+        "x": -405.2572935092509,
+        "y": -794.7803164309158
+      }
+    },
+    {
+      "definition_id": "delaunay-3d",
+      "id": "delaunay-3d_1",
+      "parameters": {},
+      "position": {
+        "x": 1467.9547479320331,
+        "y": 57.1826973060591
+      }
+    }
+  ],
+  "version": 1
+}

flowgraph/testdata/FlowGraph.xdmf

@@ -0,0 +1,22 @@
+<?xml version="1.0" encoding="utf-8"?>
+<Xdmf xmlns:xi="http://www.w3.org/2001/XInclude" Version="3.0">
+  <Domain>
+    <Grid Name="Grid">
+      <Geometry Origin="" Type="XYZ">
+        <DataItem DataType="Float" Dimensions="11023 3" Format="HDF" Precision="4">FlowGraph.h5:Data0</DataItem>
+      </Geometry>
+      <Topology Dimensions="16208" Type="Mixed">
+        <DataItem DataType="Int" Dimensions="64832" Format="HDF" Precision="8">FlowGraph.h5:Data1</DataItem>
+      </Topology>
+      <Attribute Center="Node" ElementCell="" ElementDegree="0" ElementFamily="" ItemType="" Name="RegionId" Type="Scalar">
+        <DataItem DataType="Int" Dimensions="11023" Format="HDF" Precision="8">FlowGraph.h5:Data2</DataItem>
+      </Attribute>
+      <Attribute Center="Node" ElementCell="" ElementDegree="0" ElementFamily="" ItemType="" Name="Normals" Type="None">
+        <DataItem DataType="Float" Dimensions="11023 3" Format="HDF" Precision="4">FlowGraph.h5:Data3</DataItem>
+      </Attribute>
+      <Attribute Center="Cell" ElementCell="" ElementDegree="0" ElementFamily="" ItemType="" Name="RegionId" Type="Scalar">
+        <DataItem DataType="Int" Dimensions="16208" Format="HDF" Precision="8">FlowGraph.h5:Data4</DataItem>
+      </Attribute>
+    </Grid>
+  </Domain>
+</Xdmf>

flowgraph/testdata/SimpleReadMesh.json

@@ -0,0 +1,70 @@
+{
+  "edges": [
+    {
+      "source_node": "file-path",
+      "source_port": "path",
+      "target_node": "load-muscat",
+      "target_port": "path"
+    },
+    {
+      "source_node": "load-muscat",
+      "source_port": "mesh",
+      "target_node": "mesh-sink_2",
+      "target_port": "mesh"
+    },
+    {
+      "source_node": "select-server-file_1",
+      "source_port": "path",
+      "target_node": "file-path",
+      "target_port": "path"
+    }
+  ],
+  "format": "flowgraph-workflow",
+  "nodes": [
+    {
+      "definition_id": "select-file",
+      "id": "file-path",
+      "parameters": {
+        "path": "{testdata}/FlowGraph.stl"
+      },
+      "position": {
+        "x": 158.84236178540158,
+        "y": 112.45731019009182
+      }
+    },
+    {
+      "definition_id": "load-muscat",
+      "id": "load-muscat",
+      "parameters": {},
+      "position": {
+        "x": 405.15846639414195,
+        "y": 266.371436871848
+      }
+    },
+    {
+      "definition_id": "select-server-file",
+      "id": "select-server-file_1",
+      "parameters": {
+        "file name": "{testdata}/FlowGraph.stl"
+      },
+      "position": {
+        "x": -106.11400606172988,
+        "y": -87.70353005781195
+      }
+    },
+    {
+      "definition_id": "mesh-sink",
+      "id": "mesh-sink_2",
+      "parameters": {
+        "color_field": "point:originalIds",
+        "show_axis_grid": true,
+        "show_representation": true
+      },
+      "position": {
+        "x": 554.5372659626406,
+        "y": 466.814694707449
+      }
+    }
+  ],
+  "version": 1
+}

flowgraph/testdata/SpherePoints.csv

@@ -0,0 +1,83 @@
+Point ID,Normals_0,Normals_1,Normals_2,Normals_Magnitude,Points_0,Points_1,Points_2,Points_Magnitude
+0,0,0,1,1,0,0,0.5,0.5
+1,0,0,-1,1,0,0,-0.5,0.5
+2,0.34202,0,0.939693,1,0.17101,0,0.469846,0.5
+3,0.642788,0,0.766044,1,0.321394,0,0.383022,0.5
+4,0.866025,0,0.5,1,0.433013,0,0.25,0.5
+5,0.984808,0,0.173648,1,0.492404,0,0.0868241,0.5
+6,0.984808,0,-0.173648,1,0.492404,0,-0.0868241,0.5
+7,0.866025,0,-0.5,1,0.433013,0,-0.25,0.5
+8,0.642788,0,-0.766044,1,0.321394,0,-0.383022,0.5
+9,0.34202,0,-0.939693,1,0.17101,0,-0.469846,0.5
+10,0.2767,0.201034,0.939693,1,0.13835,0.100517,0.469846,0.5
+11,0.520026,0.377821,0.766044,1,0.260013,0.188911,0.383022,0.5
+12,0.700629,0.509037,0.5,1,0.350315,0.254518,0.25,0.5
+13,0.796726,0.578855,0.173648,1,0.398363,0.289428,0.0868241,0.5
+14,0.796726,0.578855,-0.173648,1,0.398363,0.289428,-0.0868241,0.5
+15,0.700629,0.509037,-0.5,1,0.350315,0.254518,-0.25,0.5
+16,0.520026,0.377821,-0.766044,1,0.260013,0.188911,-0.383022,0.5
+17,0.2767,0.201034,-0.939693,1,0.13835,0.100517,-0.469846,0.5
+18,0.10569,0.32528,0.939693,1,0.052845,0.16264,0.469846,0.5
+19,0.198632,0.611327,0.766044,1,0.0993161,0.305664,0.383022,0.5
+20,0.267617,0.823639,0.5,1,0.133808,0.41182,0.25,0.5
+21,0.304322,0.936608,0.173648,1,0.152161,0.468304,0.0868241,0.5
+22,0.304322,0.936608,-0.173648,1,0.152161,0.468304,-0.0868241,0.5
+23,0.267617,0.823639,-0.5,1,0.133808,0.41182,-0.25,0.5
+24,0.198632,0.611327,-0.766044,1,0.0993161,0.305664,-0.383022,0.5
+25,0.10569,0.32528,-0.939693,1,0.052845,0.16264,-0.469846,0.5
+26,-0.10569,0.32528,0.939693,1,-0.052845,0.16264,0.469846,0.5
+27,-0.198632,0.611327,0.766044,1,-0.0993161,0.305664,0.383022,0.5
+28,-0.267617,0.823639,0.5,1,-0.133808,0.41182,0.25,0.5
+29,-0.304322,0.936608,0.173648,1,-0.152161,0.468304,0.0868241,0.5
+30,-0.304322,0.936608,-0.173648,1,-0.152161,0.468304,-0.0868241,0.5
+31,-0.267617,0.823639,-0.5,1,-0.133808,0.41182,-0.25,0.5
+32,-0.198632,0.611327,-0.766044,1,-0.0993161,0.305664,-0.383022,0.5
+33,-0.10569,0.32528,-0.939693,1,-0.052845,0.16264,-0.469846,0.5
+34,-0.2767,0.201034,0.939693,1,-0.13835,0.100517,0.469846,0.5
+35,-0.520026,0.377821,0.766044,1,-0.260013,0.188911,0.383022,0.5
+36,-0.700629,0.509037,0.5,1,-0.350315,0.254518,0.25,0.5
+37,-0.796726,0.578855,0.173648,1,-0.398363,0.289428,0.0868241,0.5
+38,-0.796726,0.578855,-0.173648,1,-0.398363,0.289428,-0.0868241,0.5
+39,-0.700629,0.509037,-0.5,1,-0.350315,0.254518,-0.25,0.5
+40,-0.520026,0.377821,-0.766044,1,-0.260013,0.188911,-0.383022,0.5
+41,-0.2767,0.201034,-0.939693,1,-0.13835,0.100517,-0.469846,0.5
+42,-0.34202,4.18854e-17,0.939693,1,-0.17101,2.09427e-17,0.469846,0.5
+43,-0.642788,7.87188e-17,0.766044,1,-0.321394,3.93594e-17,0.383022,0.5
+44,-0.866025,1.06058e-16,0.5,1,-0.433013,5.30288e-17,0.25,0.5
+45,-0.984808,1.20604e-16,0.173648,1,-0.492404,6.03021e-17,0.0868241,0.5
+46,-0.984808,1.20604e-16,-0.173648,1,-0.492404,6.03021e-17,-0.0868241,0.5
+47,-0.866025,1.06058e-16,-0.5,1,-0.433013,5.30288e-17,-0.25,0.5
+48,-0.642788,7.87188e-17,-0.766044,1,-0.321394,3.93594e-17,-0.383022,0.5
+49,-0.34202,4.18854e-17,-0.939693,1,-0.17101,2.09427e-17,-0.469846,0.5
+50,-0.2767,-0.201034,0.939693,1,-0.13835,-0.100517,0.469846,0.5
+51,-0.520026,-0.377821,0.766044,1,-0.260013,-0.188911,0.383022,0.5
+52,-0.700629,-0.509037,0.5,1,-0.350315,-0.254518,0.25,0.5
+53,-0.796726,-0.578855,0.173648,1,-0.398363,-0.289428,0.0868241,0.5
+54,-0.796726,-0.578855,-0.173648,1,-0.398363,-0.289428,-0.0868241,0.5
+55,-0.700629,-0.509037,-0.5,1,-0.350315,-0.254518,-0.25,0.5
+56,-0.520026,-0.377821,-0.766044,1,-0.260013,-0.188911,-0.383022,0.5
+57,-0.2767,-0.201034,-0.939693,1,-0.13835,-0.100517,-0.469846,0.5
+58,-0.10569,-0.32528,0.939693,1,-0.052845,-0.16264,0.469846,0.5
+59,-0.198632,-0.611327,0.766044,1,-0.0993161,-0.305664,0.383022,0.5
+60,-0.267617,-0.823639,0.5,1,-0.133808,-0.41182,0.25,0.5
+61,-0.304322,-0.936608,0.173648,1,-0.152161,-0.468304,0.0868241,0.5
+62,-0.304322,-0.936608,-0.173648,1,-0.152161,-0.468304,-0.0868241,0.5
+63,-0.267617,-0.823639,-0.5,1,-0.133808,-0.41182,-0.25,0.5
+64,-0.198632,-0.611327,-0.766044,1,-0.0993161,-0.305664,-0.383022,0.5
+65,-0.10569,-0.32528,-0.939693,1,-0.052845,-0.16264,-0.469846,0.5
+66,0.10569,-0.32528,0.939693,1,0.052845,-0.16264,0.469846,0.5
+67,0.198632,-0.611327,0.766044,1,0.0993161,-0.305664,0.383022,0.5
+68,0.267617,-0.823639,0.5,1,0.133808,-0.41182,0.25,0.5
+69,0.304322,-0.936608,0.173648,1,0.152161,-0.468304,0.0868241,0.5
+70,0.304322,-0.936608,-0.173648,1,0.152161,-0.468304,-0.0868241,0.5
+71,0.267617,-0.823639,-0.5,1,0.133808,-0.41182,-0.25,0.5
+72,0.198632,-0.611327,-0.766044,1,0.0993161,-0.305664,-0.383022,0.5
+73,0.10569,-0.32528,-0.939693,1,0.052845,-0.16264,-0.469846,0.5
+74,0.2767,-0.201034,0.939693,1,0.13835,-0.100517,0.469846,0.5
+75,0.520026,-0.377821,0.766044,1,0.260013,-0.188911,0.383022,0.5
+76,0.700629,-0.509037,0.5,1,0.350315,-0.254518,0.25,0.5
+77,0.796726,-0.578855,0.173648,1,0.398363,-0.289428,0.0868241,0.5
+78,0.796726,-0.578855,-0.173648,1,0.398363,-0.289428,-0.0868241,0.5
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flowgraph/testdata/muscat-muscat-mesh-conversion.json

@@ -0,0 +1,101 @@
+{
+  "format": "flowgraph-workflow",
+  "version": 2,
+  "nodes": [
+    {
+      "id": "mesh_loader",
+      "definition_id": "load-muscat",
+      "parameters": {},
+      "position": {
+        "x": 35.98144924280439,
+        "y": -4.398239016651743
+      }
+    },
+    {
+      "id": "mesh_writer",
+      "definition_id": "write-muscat",
+      "parameters": {},
+      "position": {
+        "x": 316.89393366219383,
+        "y": -145.9240085753448
+      }
+    },
+    {
+      "id": "input",
+      "definition_id": "workflow-input",
+      "parameters": {
+        "name": "in_filename"
+      },
+      "position": {
+        "x": -260.27894490161793,
+        "y": -5.0071362735997695
+      }
+    },
+    {
+      "id": "title-doc-5",
+      "definition_id": "title-doc",
+      "parameters": {
+        "title": "Mesh Converter Muscat >> Muscat"
+      },
+      "position": {
+        "x": -4.6817529886857585,
+        "y": -321.285582053244
+      }
+    },
+    {
+      "id": "paragraph-doc-6",
+      "definition_id": "paragraph-doc",
+      "parameters": {
+        "text": "Read a mesh file with Muscat and save it with Muscat. "
+      },
+      "position": {
+        "x": -0.7861539053497779,
+        "y": -245.15996619593776
+      }
+    },
+    {
+      "id": "output",
+      "definition_id": "workflow-input",
+      "parameters": {
+        "name": "out_filename"
+      },
+      "position": {
+        "x": -261.23423804912477,
+        "y": -155.41585621644475
+      }
+    }
+  ],
+  "inputs": [
+    {
+      "name": "in_filename",
+      "node_id": "input",
+      "node_port": "value"
+    },
+    {
+      "name": "out_filename",
+      "node_id": "output",
+      "node_port": "value"
+    }
+  ],
+  "outputs": [],
+  "edges": [
+    {
+      "source_node": "mesh_loader",
+      "source_port": "mesh",
+      "target_node": "mesh_writer",
+      "target_port": "mesh"
+    },
+    {
+      "source_node": "input",
+      "source_port": "value",
+      "target_node": "mesh_loader",
+      "target_port": "path"
+    },
+    {
+      "source_node": "output",
+      "source_port": "value",
+      "target_node": "mesh_writer",
+      "target_port": "path"
+    }
+  ]
+}

flowgraph/version.py

@@ -0,0 +1,3 @@
+"""Version information for FlowGraph."""
+
+__version__ = "0.1.2"