fiqus 2024.6.0__py3-none-any.whl → 2024.12.0__py3-none-any.whl

tests/utils/helpers.py

@@ -1,97 +1,97 @@
-import functools
-import itertools
-import operator
-import os
-import unittest
-from pathlib import Path
-
-import numpy as np
-
-from fiqus.data.DataFiQuS import FDM
-from fiqus.utils.Utils import FilesAndFolders as FFs
-
-
-class Paths:
-    """
-    Helper class used in FiQuS tests to get file and folder paths
-    :param model_name: name of yaml input file (without .yaml)
-    :param f_extension: file extension to apply to the folders, for example '.brep' or '.msh'
-    :return: tuple: fdm, outputs_folder, input_folder, input_file, model_folder, model_file, reference_folder, reference_file
-    """
-
-    def __init__(self, model_name, f_extension=''):
-        self.inputs_folder_name = '_inputs'
-        self.outputs_folder_name = '_outputs'
-        self.references_folder_name = '_references'
-
-        self.test_outputs_folder = os.path.join(os.getcwd(), self.outputs_folder_name)
-        self.inputs_folder = os.path.join(os.getcwd(), self.inputs_folder_name, model_name)
-        self.model_folder = os.path.join(os.getcwd(), self.outputs_folder_name, model_name)
-        self.references_folder = os.path.join(os.getcwd(), self.references_folder_name, model_name)
-
-        self.input_file = os.path.join(self.inputs_folder, f'{model_name}.yaml')
-        self.model_file = os.path.join(self.model_folder, f'{model_name}.{f_extension}')
-        self.reference_file = os.path.join(self.references_folder, f'{model_name}.{f_extension}')
-
-
-def filecmp(filename1, filename2):
-    """
-    From: https://stackoverflow.com/questions/254350/in-python-is-there-a-concise-way-of-comparing-whether-the-contents-of-two-text
-    Do the two files have exactly the same contents?
-    """
-    with open(filename1, "rb") as fp1, open(filename2, "rb") as fp2:
-        print(f'The {filename1} size is: {os.fstat(fp1.fileno()).st_size} b')
-        print(f'The {filename2} size is: {os.fstat(fp2.fileno()).st_size} b')
-        if os.fstat(fp1.fileno()).st_size != os.fstat(fp2.fileno()).st_size:
-            return False  # different sizes ∴ not equal
-
-        # set up one 4k-reader for each file
-        fp1_reader = functools.partial(fp1.read, 4096)
-        fp2_reader = functools.partial(fp2.read, 4096)
-
-        # pair each 4k-chunk from the two readers while they do not return '' (EOF)
-        cmp_pairs = zip(iter(fp1_reader, b''), iter(fp2_reader, b''))
-
-        # return True for all pairs that are not equal
-        inequalities = itertools.starmap(operator.ne, cmp_pairs)
-        ineqs = []
-        for ineq in inequalities:
-            ineqs.append(ineq)
-        # voila; any() stops at first True value
-        print(f'The file comp function gives: {not any(inequalities)}')
-        return not any(inequalities)
-
-
-def assert_two_parameters(true_value, test_value):
-    """
-     Some functions used in multiple test functions
-        **Assert two parameters - accepts multiple types**
-    """
-    # TODO: improve robustness and readability
-    test_case = unittest.TestCase()
-
-    if isinstance(true_value, np.ndarray) or isinstance(true_value, list):
-        if len(true_value) == 1:
-            true_value = float(true_value)
-
-    if isinstance(test_value, np.ndarray) or isinstance(test_value, list):
-        if len(test_value) == 1:
-            test_value = float(test_value)
-
-    # Comparison
-    if isinstance(test_value, np.ndarray) or isinstance(test_value, list):
-        if np.array(true_value).ndim == 2:
-            for i, test_row in enumerate(test_value):
-                if isinstance(test_row[0], np.floating):
-                    test_row = np.array(test_row).round(10)
-                    true_value[i] = np.array(true_value[i]).round(10)
-
-                test_case.assertListEqual(list(test_row), list(true_value[i]))
-        else:
-            if isinstance(test_value[0], np.floating):
-                test_value = np.array(test_value).round(10)
-                true_value = np.array(true_value).round(10)
-
-            test_case.assertListEqual(list(test_value), list(true_value))
-    else:
-        test_case.assertEqual(test_value, true_value)
+import functools
+import itertools
+import operator
+import os
+import unittest
+from pathlib import Path
+
+import numpy as np
+
+from fiqus.data.DataFiQuS import FDM
+from fiqus.utils.Utils import FilesAndFolders as FFs
+
+
+class Paths:
+    """
+    Helper class used in FiQuS tests to get file and folder paths
+    :param model_name: name of yaml input file (without .yaml)
+    :param f_extension: file extension to apply to the folders, for example '.brep' or '.msh'
+    :return: tuple: fdm, outputs_folder, input_folder, input_file, model_folder, model_file, reference_folder, reference_file
+    """
+
+    def __init__(self, model_name, f_extension=''):
+        self.inputs_folder_name = '_inputs'
+        self.outputs_folder_name = '_outputs'
+        self.references_folder_name = '_references'
+
+        self.test_outputs_folder = os.path.join(os.getcwd(), self.outputs_folder_name)
+        self.inputs_folder = os.path.join(os.getcwd(), self.inputs_folder_name, model_name)
+        self.model_folder = os.path.join(os.getcwd(), self.outputs_folder_name, model_name)
+        self.references_folder = os.path.join(os.getcwd(), self.references_folder_name, model_name)
+
+        self.input_file = os.path.join(self.inputs_folder, f'{model_name}.yaml')
+        self.model_file = os.path.join(self.model_folder, f'{model_name}.{f_extension}')
+        self.reference_file = os.path.join(self.references_folder, f'{model_name}.{f_extension}')
+
+
+def filecmp(filename1, filename2):
+    """
+    From: https://stackoverflow.com/questions/254350/in-python-is-there-a-concise-way-of-comparing-whether-the-contents-of-two-text
+    Do the two files have exactly the same contents?
+    """
+    with open(filename1, "rb") as fp1, open(filename2, "rb") as fp2:
+        print(f'The {filename1} size is: {os.fstat(fp1.fileno()).st_size} b')
+        print(f'The {filename2} size is: {os.fstat(fp2.fileno()).st_size} b')
+        if os.fstat(fp1.fileno()).st_size != os.fstat(fp2.fileno()).st_size:
+            return False  # different sizes ∴ not equal
+
+        # set up one 4k-reader for each file
+        fp1_reader = functools.partial(fp1.read, 4096)
+        fp2_reader = functools.partial(fp2.read, 4096)
+
+        # pair each 4k-chunk from the two readers while they do not return '' (EOF)
+        cmp_pairs = zip(iter(fp1_reader, b''), iter(fp2_reader, b''))
+
+        # return True for all pairs that are not equal
+        inequalities = itertools.starmap(operator.ne, cmp_pairs)
+        ineqs = []
+        for ineq in inequalities:
+            ineqs.append(ineq)
+        # voila; any() stops at first True value
+        print(f'The file comp function gives: {not any(inequalities)}')
+        return not any(inequalities)
+
+
+def assert_two_parameters(true_value, test_value):
+    """
+     Some functions used in multiple test functions
+        **Assert two parameters - accepts multiple types**
+    """
+    # TODO: improve robustness and readability
+    test_case = unittest.TestCase()
+
+    if isinstance(true_value, np.ndarray) or isinstance(true_value, list):
+        if len(true_value) == 1:
+            true_value = float(true_value)
+
+    if isinstance(test_value, np.ndarray) or isinstance(test_value, list):
+        if len(test_value) == 1:
+            test_value = float(test_value)
+
+    # Comparison
+    if isinstance(test_value, np.ndarray) or isinstance(test_value, list):
+        if np.array(true_value).ndim == 2:
+            for i, test_row in enumerate(test_value):
+                if isinstance(test_row[0], np.floating):
+                    test_row = np.array(test_row).round(10)
+                    true_value[i] = np.array(true_value[i]).round(10)
+
+                test_case.assertListEqual(list(test_row), list(true_value[i]))
+        else:
+            if isinstance(test_value[0], np.floating):
+                test_value = np.array(test_value).round(10)
+                true_value = np.array(true_value).round(10)
+
+            test_case.assertListEqual(list(test_value), list(true_value))
+    else:
+        test_case.assertEqual(test_value, true_value)

fiqus-2024.6.0.dist-info/METADATA

@@ -1,103 +0,0 @@
-Metadata-Version: 2.1
-Name: fiqus
-Version: 2024.6.0
-Summary: Source code for STEAM FiQuS tool
-Home-page: https://gitlab.cern.ch/steam/fiqus
-Author: STEAM Team
-Author-email: steam-team@cern.ch
-Keywords: STEAM,FiQuS,CERN
-Classifier: Programming Language :: Python :: 3.11
-Requires-Python: >=3.11
-Description-Content-Type: text/markdown
-Requires-Dist: gmsh ==4.11.1
-Requires-Dist: matplotlib ==3.8.3
-Requires-Dist: Jinja2 ==3.1.3
-Requires-Dist: numpy ==1.26.4
-Requires-Dist: pandas ==2.2.1
-Requires-Dist: pydantic ==2.6.4
-Requires-Dist: ruamel.yaml ==0.18.6
-Requires-Dist: scipy ==1.12.0
-Requires-Dist: typing-extensions ==4.10.0
-Provides-Extra: all
-Requires-Dist: gmsh ==4.11.1 ; extra == 'all'
-Requires-Dist: matplotlib ==3.8.3 ; extra == 'all'
-Requires-Dist: Jinja2 ==3.1.3 ; extra == 'all'
-Requires-Dist: numpy ==1.26.4 ; extra == 'all'
-Requires-Dist: pandas ==2.2.1 ; extra == 'all'
-Requires-Dist: pydantic ==2.6.4 ; extra == 'all'
-Requires-Dist: ruamel.yaml ==0.18.6 ; extra == 'all'
-Requires-Dist: scipy ==1.12.0 ; extra == 'all'
-Requires-Dist: typing-extensions ==4.10.0 ; extra == 'all'
-Requires-Dist: markdown ==3.3.7 ; extra == 'all'
-Requires-Dist: markdown-include ==0.7.0 ; extra == 'all'
-Requires-Dist: mkdocs ==1.3.1 ; extra == 'all'
-Requires-Dist: mkdocs-material ==8.5.3 ; extra == 'all'
-Requires-Dist: mkdocstrings-python ==0.7.1 ; extra == 'all'
-Requires-Dist: mkdocs-include-markdown-plugin ==3.8.1 ; extra == 'all'
-Requires-Dist: mkdocs-git-revision-date-localized-plugin ==1.1.0 ; extra == 'all'
-Requires-Dist: griffe ==0.29.1 ; extra == 'all'
-Requires-Dist: mypy ==0.971 ; extra == 'all'
-Requires-Dist: pylint ==2.15.3 ; extra == 'all'
-Requires-Dist: pytest ==7.1.3 ; extra == 'all'
-Requires-Dist: pytest-cov ==3.0.0 ; extra == 'all'
-Requires-Dist: coverage ==6.4.4 ; extra == 'all'
-Requires-Dist: coverage-badge ==1.1.0 ; extra == 'all'
-Requires-Dist: flake8 ==5.0.4 ; extra == 'all'
-Requires-Dist: setuptools ==65.3.0 ; extra == 'all'
-Provides-Extra: build
-Requires-Dist: setuptools ==65.3.0 ; extra == 'build'
-Provides-Extra: docs
-Requires-Dist: markdown ==3.3.7 ; extra == 'docs'
-Requires-Dist: markdown-include ==0.7.0 ; extra == 'docs'
-Requires-Dist: mkdocs ==1.3.1 ; extra == 'docs'
-Requires-Dist: mkdocs-material ==8.5.3 ; extra == 'docs'
-Requires-Dist: mkdocstrings-python ==0.7.1 ; extra == 'docs'
-Requires-Dist: mkdocs-include-markdown-plugin ==3.8.1 ; extra == 'docs'
-Requires-Dist: mkdocs-git-revision-date-localized-plugin ==1.1.0 ; extra == 'docs'
-Requires-Dist: griffe ==0.29.1 ; extra == 'docs'
-Provides-Extra: tests
-Requires-Dist: mypy ==0.971 ; extra == 'tests'
-Requires-Dist: pylint ==2.15.3 ; extra == 'tests'
-Requires-Dist: pytest ==7.1.3 ; extra == 'tests'
-Requires-Dist: pytest-cov ==3.0.0 ; extra == 'tests'
-Requires-Dist: coverage ==6.4.4 ; extra == 'tests'
-Requires-Dist: coverage-badge ==1.1.0 ; extra == 'tests'
-Requires-Dist: flake8 ==5.0.4 ; extra == 'tests'
-
-![FiQuS logo](https://gitlab.cern.ch/steam/fiqus/-/raw/master/docs/images/FiQuS_name_logo.svg)
-
-# Introduction
-Source code for STEAM **FiQuS** (**Fi**nite Element **Qu**ench **S**imulator).
-
-# Publications
-
-- S. Atalay et al, "An open-source 3D FE quench simulation tool for no-insulation HTS pancake coils", in Superconductor Science and Technology, doi: [10.1088/1361-6668/ad3f83](https://doi.org/10.1088/1361-6668/ad3f83)
-- J. Dular et al, "Coupled Axial and Transverse Currents Method for Finite Element Modelling of Periodic Superconductors", arXiv preprint, doi:[10.48550/arXiv.2404.09775](https://doi.org/10.48550/arXiv.2404.09775).
-- A. Vitrano et al, "An Open-Source Finite Element Quench Simulation Tool for Superconducting Magnets," in IEEE Transactions on Applied Superconductivity, vol. 33, no. 5, pp. 1-6, Aug. 2023, Art no. 4702006, doi: [10.1109/TASC.2023.3259332](https://ieeexplore.ieee.org/abstract/document/10077402).
-- M. Wozniak et al, "Fast Quench Propagation Conductor for Protecting Canted Cos-Theta Magnets," in IEEE Transactions on Applied Superconductivity, vol. 33, no. 5, pp. 1-5, Aug. 2023, Art no. 4701705, doi: [10.1109/TASC.2023.3247997](https://ieeexplore.ieee.org/document/10050158).
-
-# Folder Structure
-![FiQuS folder structure](https://gitlab.cern.ch/steam/fiqus/-/raw/master/docs/images/FiQuS_folder_structure.svg)
-
-# Installation
-
-## Released version:
-```pip install fiqus```
-
-# Links
-STEAM website: https://espace.cern.ch/steam/
-
-STEAM-FiQuS website: https://espace.cern.ch/steam/SitePages/FiQuS.aspx
-
-STEAM-FiQuS documentation: https://steam-fiqus.docs.cern.ch/ 
-
-Coverage report: https://steam-fiqus.docs.cern.ch/htmlcov/ 
-
-# Contact
-steam-team@cern.ch
-
-# STEAM User Agreement
-By using any software of the STEAM framework, users agree with this document:
-https://edms.cern.ch/document/2024516
-
-(Copyright © 2022, CERN, Switzerland. All rights reserved.)

fiqus-2024.6.0.dist-info/RECORD

@@ -1,79 +0,0 @@
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