figpack 0.2.4__py3-none-any.whl → 0.2.6__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Potentially problematic release.
This version of figpack might be problematic. Click here for more details.
- figpack/__init__.py +5 -1
- figpack/cli.py +2 -118
- figpack/core/_bundle_utils.py +5 -6
- figpack/core/_save_figure.py +31 -0
- figpack/core/_server_manager.py +0 -2
- figpack/core/_show_view.py +22 -22
- figpack/core/_upload_bundle.py +61 -22
- figpack/core/_view_figure.py +138 -0
- figpack/core/figpack_view.py +74 -25
- figpack/{figpack-gui-dist/assets/index-CuFseOGX.js → figpack-figure-dist/assets/index-HXdk2TtM.js} +58 -58
- figpack/{figpack-gui-dist → figpack-figure-dist}/index.html +1 -1
- figpack/spike_sorting/views/Autocorrelograms.py +29 -19
- figpack/spike_sorting/views/CrossCorrelograms.py +29 -19
- figpack/spike_sorting/views/UnitsTable.py +27 -8
- figpack/views/Gallery.py +88 -0
- figpack/views/GalleryItem.py +47 -0
- figpack/views/Image.py +37 -0
- figpack/views/Markdown.py +12 -2
- figpack/views/MatplotlibFigure.py +26 -3
- figpack/views/PlotlyFigure.py +18 -2
- figpack/views/__init__.py +2 -0
- figpack-0.2.6.dist-info/METADATA +96 -0
- figpack-0.2.6.dist-info/RECORD +53 -0
- figpack-0.2.4.dist-info/METADATA +0 -168
- figpack-0.2.4.dist-info/RECORD +0 -49
- /figpack/{figpack-gui-dist → figpack-figure-dist}/assets/index-Cmae55E4.css +0 -0
- /figpack/{figpack-gui-dist → figpack-figure-dist}/assets/neurosift-logo-CLsuwLMO.png +0 -0
- {figpack-0.2.4.dist-info → figpack-0.2.6.dist-info}/WHEEL +0 -0
- {figpack-0.2.4.dist-info → figpack-0.2.6.dist-info}/entry_points.txt +0 -0
- {figpack-0.2.4.dist-info → figpack-0.2.6.dist-info}/licenses/LICENSE +0 -0
- {figpack-0.2.4.dist-info → figpack-0.2.6.dist-info}/top_level.txt +0 -0
figpack-0.2.4.dist-info/METADATA
DELETED
|
@@ -1,168 +0,0 @@
|
|
|
1
|
-
Metadata-Version: 2.4
|
|
2
|
-
Name: figpack
|
|
3
|
-
Version: 0.2.4
|
|
4
|
-
Summary: A Python package for creating shareable, interactive visualizations in the browser
|
|
5
|
-
Author-email: Jeremy Magland <jmagland@flatironinstitute.org>
|
|
6
|
-
License: Apache-2.0
|
|
7
|
-
Project-URL: Homepage, https://github.com/magland/figpack
|
|
8
|
-
Project-URL: Repository, https://github.com/magland/figpack
|
|
9
|
-
Project-URL: Documentation, https://github.com/magland/figpack#readme
|
|
10
|
-
Project-URL: Bug Tracker, https://github.com/magland/figpack/issues
|
|
11
|
-
Keywords: visualization,plotting,timeseries,interactive
|
|
12
|
-
Classifier: Development Status :: 3 - Alpha
|
|
13
|
-
Classifier: Intended Audience :: Developers
|
|
14
|
-
Classifier: Intended Audience :: Science/Research
|
|
15
|
-
Classifier: License :: OSI Approved :: Apache Software License
|
|
16
|
-
Classifier: Operating System :: OS Independent
|
|
17
|
-
Classifier: Programming Language :: Python :: 3
|
|
18
|
-
Classifier: Programming Language :: Python :: 3.8
|
|
19
|
-
Classifier: Programming Language :: Python :: 3.9
|
|
20
|
-
Classifier: Programming Language :: Python :: 3.10
|
|
21
|
-
Classifier: Programming Language :: Python :: 3.11
|
|
22
|
-
Classifier: Programming Language :: Python :: 3.12
|
|
23
|
-
Classifier: Topic :: Scientific/Engineering :: Visualization
|
|
24
|
-
Requires-Python: >=3.8
|
|
25
|
-
Description-Content-Type: text/markdown
|
|
26
|
-
License-File: LICENSE
|
|
27
|
-
Requires-Dist: numpy
|
|
28
|
-
Requires-Dist: zarr<3
|
|
29
|
-
Requires-Dist: requests
|
|
30
|
-
Requires-Dist: psutil
|
|
31
|
-
Provides-Extra: test
|
|
32
|
-
Requires-Dist: pytest>=7.0; extra == "test"
|
|
33
|
-
Requires-Dist: pytest-cov>=4.0; extra == "test"
|
|
34
|
-
Requires-Dist: pytest-mock>=3.10; extra == "test"
|
|
35
|
-
Requires-Dist: spikeinterface; extra == "test"
|
|
36
|
-
Requires-Dist: matplotlib; extra == "test"
|
|
37
|
-
Requires-Dist: plotly; extra == "test"
|
|
38
|
-
Provides-Extra: dev
|
|
39
|
-
Requires-Dist: pytest>=7.0; extra == "dev"
|
|
40
|
-
Requires-Dist: pytest-cov>=4.0; extra == "dev"
|
|
41
|
-
Requires-Dist: pytest-mock>=3.10; extra == "dev"
|
|
42
|
-
Requires-Dist: black>=24.0; extra == "dev"
|
|
43
|
-
Requires-Dist: pre-commit>=3.0; extra == "dev"
|
|
44
|
-
Dynamic: license-file
|
|
45
|
-
|
|
46
|
-
# figpack
|
|
47
|
-
|
|
48
|
-
A Python package for creating shareable, interactive visualizations in the browser.
|
|
49
|
-
|
|
50
|
-
## Overview
|
|
51
|
-
|
|
52
|
-
figpack enables you to create interactive data visualizations that can be displayed in a web browser and optionally shared online. The package focuses on timeseries data visualization with support for complex, nested layouts.
|
|
53
|
-
|
|
54
|
-
### Key Features
|
|
55
|
-
|
|
56
|
-
- **Interactive timeseries graphs** with line series, markers, and interval plots
|
|
57
|
-
- **Flexible layout system** with boxes, splitters, and tab layouts
|
|
58
|
-
- **Web-based rendering** that works in any modern browser
|
|
59
|
-
- **Shareable visualizations** that can be uploaded and shared via URLs
|
|
60
|
-
- **Zarr-based data storage** for efficient handling of large datasets
|
|
61
|
-
|
|
62
|
-
## Installation
|
|
63
|
-
|
|
64
|
-
Install figpack using pip:
|
|
65
|
-
|
|
66
|
-
```bash
|
|
67
|
-
pip install figpack
|
|
68
|
-
```
|
|
69
|
-
|
|
70
|
-
## Quick Start
|
|
71
|
-
|
|
72
|
-
```python
|
|
73
|
-
import numpy as np
|
|
74
|
-
import figpack.views as vv
|
|
75
|
-
|
|
76
|
-
# Create a timeseries graph
|
|
77
|
-
graph = vv.TimeseriesGraph(y_label="Signal")
|
|
78
|
-
|
|
79
|
-
# Add some data
|
|
80
|
-
t = np.linspace(0, 10, 1000)
|
|
81
|
-
y = np.sin(2 * np.pi * t)
|
|
82
|
-
graph.add_line_series(name="sine wave", t=t, y=y, color="blue")
|
|
83
|
-
|
|
84
|
-
# Display the visualization
|
|
85
|
-
graph.show(open_in_browser=True, title="Quick Start Example")
|
|
86
|
-
```
|
|
87
|
-
|
|
88
|
-
## Available Views
|
|
89
|
-
|
|
90
|
-
figpack provides a comprehensive set of view components for creating interactive visualizations:
|
|
91
|
-
|
|
92
|
-
### Core Views
|
|
93
|
-
|
|
94
|
-
- **[TimeseriesGraph](docs/timeseries-graph.md)** - Interactive line plots, markers, and intervals ([example](examples/example_timeseries_graph.py))
|
|
95
|
-
- **[MultiChannelTimeseries](docs/multichannel-timeseries.md)** - Multi-channel timeseries visualization ([example](examples/example_multichannel_timeseries.py))
|
|
96
|
-
- **[Image](docs/image.md)** - Display images with optional annotations ([example](examples/example_image.py))
|
|
97
|
-
- **[Markdown](docs/markdown.md)** - Render markdown content ([example](examples/example_markdown.py))
|
|
98
|
-
|
|
99
|
-
### Layout Views
|
|
100
|
-
|
|
101
|
-
- **[Box](docs/box.md)** - Flexible container with horizontal/vertical layouts ([example](examples/example_box.py))
|
|
102
|
-
- **[Splitter](docs/splitter.md)** - Resizable split panes ([example](examples/example_splitter.py))
|
|
103
|
-
- **[TabLayout](docs/tab-layout.md)** - Tabbed interface for multiple views ([example](examples/example_tablayout.py))
|
|
104
|
-
|
|
105
|
-
### External Figure Support
|
|
106
|
-
|
|
107
|
-
- **[MatplotlibFigure](docs/matplotlib-figure.md)** - Embed matplotlib plots ([example](examples/example_matplotlib.py))
|
|
108
|
-
- **[PlotlyFigure](docs/plotly-figure.md)** - Embed plotly visualizations ([example](examples/example_plotly.py))
|
|
109
|
-
|
|
110
|
-
### Spike Sorting Views
|
|
111
|
-
|
|
112
|
-
- **[Autocorrelograms](docs/autocorrelograms.md)** - Auto-correlation analysis ([example](examples/example_autocorrelograms.py))
|
|
113
|
-
- **[CrossCorrelograms](docs/cross-correlograms.md)** - Cross-correlation analysis ([example](examples/example_cross_correlograms.py))
|
|
114
|
-
- **[UnitsTable](docs/units-table.md)** - Sortable table for spike sorting units ([example](examples/example_units_table.py))
|
|
115
|
-
|
|
116
|
-
## Examples
|
|
117
|
-
|
|
118
|
-
See the `examples/` directory for working examples of each view type.
|
|
119
|
-
|
|
120
|
-
## Usage Modes
|
|
121
|
-
|
|
122
|
-
### Local-only Mode
|
|
123
|
-
|
|
124
|
-
```python
|
|
125
|
-
view.show(open_in_browser=True, title="Local Visualization")
|
|
126
|
-
```
|
|
127
|
-
|
|
128
|
-
### Sharing Online
|
|
129
|
-
|
|
130
|
-
Set the `FIGPACK_API_KEY` environment variable and use:
|
|
131
|
-
|
|
132
|
-
```python
|
|
133
|
-
view.show(upload=True, open_in_browser=True, title="Shared Visualization")
|
|
134
|
-
```
|
|
135
|
-
|
|
136
|
-
### Development Mode
|
|
137
|
-
|
|
138
|
-
Set `_dev=True` in the call to show() to enable development mode, which allows for live updates and development of figpack-gui.
|
|
139
|
-
|
|
140
|
-
## Command Line Interface
|
|
141
|
-
|
|
142
|
-
figpack includes a command-line interface for working with figures:
|
|
143
|
-
|
|
144
|
-
### Download a Figure
|
|
145
|
-
|
|
146
|
-
```bash
|
|
147
|
-
figpack download <figure-url> <dest.tar.gz>
|
|
148
|
-
```
|
|
149
|
-
|
|
150
|
-
Download a figure from any figpack URL and save it as a local archive.
|
|
151
|
-
|
|
152
|
-
### View a Figure Archive
|
|
153
|
-
|
|
154
|
-
```bash
|
|
155
|
-
figpack view <figure.tar.gz>
|
|
156
|
-
```
|
|
157
|
-
|
|
158
|
-
Extract and view a figure archive in your browser. The server will run locally until you press Enter.
|
|
159
|
-
|
|
160
|
-
Use `--port <number>` to specify a custom port.
|
|
161
|
-
|
|
162
|
-
## License
|
|
163
|
-
|
|
164
|
-
Apache-2.0
|
|
165
|
-
|
|
166
|
-
## Contributing
|
|
167
|
-
|
|
168
|
-
Visit the [GitHub repository](https://github.com/magland/figpack) for issues, contributions, and the latest updates.
|
figpack-0.2.4.dist-info/RECORD
DELETED
|
@@ -1,49 +0,0 @@
|
|
|
1
|
-
figpack/__init__.py,sha256=9I8fC_RO4PRKHgMbTZqh-HfikC6KBrpKRaaJ4WQUKDg,124
|
|
2
|
-
figpack/cli.py,sha256=DYV-DxzWnQTMNywW-ZzhlTEFOEIt11rAKdobdBmRQFk,12051
|
|
3
|
-
figpack/core/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
|
|
4
|
-
figpack/core/_bundle_utils.py,sha256=73E6FinAvrt1QATGncIqyg6JLeiWVmlGF8NOcFyeYSs,1913
|
|
5
|
-
figpack/core/_server_manager.py,sha256=5-OUZ9Np9aKIjkYxGkjKjJKVL44FOydNWHpGuPm_Qs8,11085
|
|
6
|
-
figpack/core/_show_view.py,sha256=8OOuicYEvqN3wwuioKpffHChOpH5Gm_G564HArFo1FA,5302
|
|
7
|
-
figpack/core/_upload_bundle.py,sha256=lZQHl7pmXD-jQjyCBMN_w79xnHSDgxAx430qeImTyuE,13401
|
|
8
|
-
figpack/core/config.py,sha256=oOR7SlP192vuFhYlS-h14HnG-kd_3gaz0vshXch2RNc,173
|
|
9
|
-
figpack/core/figpack_view.py,sha256=h5D67h_71bb1kW3U0yRH34ZZN_4PGr8OwNL1U8fb5fg,4032
|
|
10
|
-
figpack/figpack-gui-dist/index.html,sha256=rObLsUTtDMwDG5vpeCsQC94MhnbNsVGjUVw0w7q2dIM,486
|
|
11
|
-
figpack/figpack-gui-dist/assets/index-Cmae55E4.css,sha256=Yg0apcYehJwQvSQIUH13S7tsfqWQDevpJsAho0dDf0g,5499
|
|
12
|
-
figpack/figpack-gui-dist/assets/index-CuFseOGX.js,sha256=wNJFCDKOVSoTMyipnTvnsTRv2tvB3FkxPAmsceAL2W4,1593545
|
|
13
|
-
figpack/figpack-gui-dist/assets/neurosift-logo-CLsuwLMO.png,sha256=g5m-TwrGh5f6-9rXtWV-znH4B0nHgc__0GWclRDLUHs,9307
|
|
14
|
-
figpack/franklab/__init__.py,sha256=HkehqGImJE_sE2vbPDo-HbgtEYaMICb9-230xTYvRTU,56
|
|
15
|
-
figpack/franklab/views/TrackAnimation.py,sha256=3Jv1Ri4FIwTyqNahinqhHsBH1Bv_iZrEGx12w6diJ2M,5636
|
|
16
|
-
figpack/franklab/views/__init__.py,sha256=XXZ9QJLh9KAeeLgKbi6ogYOyfTgHP-N6o3u981NFwx8,116
|
|
17
|
-
figpack/spike_sorting/__init__.py,sha256=09njqh-oFaCTdZUsc4HAOFTliUYV9DClddfZ0Q_dm0I,61
|
|
18
|
-
figpack/spike_sorting/views/AutocorrelogramItem.py,sha256=qHmvIdHpbfVA_utPb5N2oP3hSP2cGnlT8VLaxOXV4UM,738
|
|
19
|
-
figpack/spike_sorting/views/Autocorrelograms.py,sha256=43EgKHvUmXUA9QSOJQZiTeLHq_kKW43Ku3FIH7ZjfM8,3323
|
|
20
|
-
figpack/spike_sorting/views/AverageWaveforms.py,sha256=mvMkS3wf6MpI95tlGqKxBjxZlHqJr4aqG7SZvHigIsI,5193
|
|
21
|
-
figpack/spike_sorting/views/CrossCorrelogramItem.py,sha256=uSd0i2hupteuILi_aKp7bYPYpL_PdC3CUDRMOEKUEM0,880
|
|
22
|
-
figpack/spike_sorting/views/CrossCorrelograms.py,sha256=gqPXbEgg-GE3NCJQT2bahp1ITSW33F3q9ZuJRGrR68M,4061
|
|
23
|
-
figpack/spike_sorting/views/RasterPlot.py,sha256=gFdfH9SEm-tf8Ptqw4M1Q7IHRytUOULpBZfM2TdMfZQ,2215
|
|
24
|
-
figpack/spike_sorting/views/RasterPlotItem.py,sha256=iW7fuDEjSfvf5YMIwrF_6cmKvD76oCigOUMHtGgBsPI,638
|
|
25
|
-
figpack/spike_sorting/views/SpikeAmplitudes.py,sha256=vQYWdJM-3qu568bcfGDC9k9LW_PgvU8j4tN9QYc08Mo,2665
|
|
26
|
-
figpack/spike_sorting/views/SpikeAmplitudesItem.py,sha256=j5Na-diY-vRUAPu0t0VkyFCSKFnQ_f5HT077mB3Cy8c,1134
|
|
27
|
-
figpack/spike_sorting/views/UnitSimilarityScore.py,sha256=cJA9MkETos9qHhV1tqgA7SfNEaPo-duXYCE76hSFGnA,948
|
|
28
|
-
figpack/spike_sorting/views/UnitsTable.py,sha256=kQZvMlnPk8MAMPr3GlL4T3cAvGfSHBbB52jvMJ2-YAU,2173
|
|
29
|
-
figpack/spike_sorting/views/UnitsTableColumn.py,sha256=zBnuoeILTuiVLDvtcOxqa37E5WlbR12rlwNJUeWXxY4,847
|
|
30
|
-
figpack/spike_sorting/views/UnitsTableRow.py,sha256=rEb2hMTA_pl2fTW1nOvnGir0ysfNx4uww3aekZzfWjk,720
|
|
31
|
-
figpack/spike_sorting/views/__init__.py,sha256=iRq7xPmyhnQ3GffnPC0GxKGEWnlqXY_8IOxsMqYZ1IM,967
|
|
32
|
-
figpack/views/Box.py,sha256=TfhPFNtVEq71LCucmWk3XX2WxQLdaeRiWGm5BM0k2l4,2236
|
|
33
|
-
figpack/views/Image.py,sha256=xbnkmiqlrYD9_BGsQgSGgqXJbvNECTI7iJhLsEd3kSg,2990
|
|
34
|
-
figpack/views/LayoutItem.py,sha256=wy8DggkIzZpU0F1zFIBceS7HpBb6lu-A3hpYINQzedk,1595
|
|
35
|
-
figpack/views/Markdown.py,sha256=KEqEAz5VXErLXr8dYJrWY1I8_VdRazDIcjCNcHfUGPA,769
|
|
36
|
-
figpack/views/MatplotlibFigure.py,sha256=LQSvPY3_iSHO-ZfWjRO6iOVUp5W-mmlt3mj8GBoK18w,1939
|
|
37
|
-
figpack/views/MultiChannelTimeseries.py,sha256=sWr2nW1eoYR7V44wF7fac7IoQ6BOnus1nc4STkgIkYw,8501
|
|
38
|
-
figpack/views/PlotlyFigure.py,sha256=B02nfWFM89GnDUZiS2v89ZtGBdSZtAwcXUD_7rV7kN4,1633
|
|
39
|
-
figpack/views/Splitter.py,sha256=x9jLCTlIvDy5p9ymVd0X48KDccyD6bJANhXyFgKEmtE,2007
|
|
40
|
-
figpack/views/TabLayout.py,sha256=5g3nmL95PfqgI0naqZXHMwLVo2ebDlGX01Hy9044bUw,1898
|
|
41
|
-
figpack/views/TabLayoutItem.py,sha256=xmHA0JsW_6naJze4_mQuP_Fy0Nm17p2N7w_AsmVRp8k,880
|
|
42
|
-
figpack/views/TimeseriesGraph.py,sha256=OAaCjO8fo86u_gO_frNfRGxng3tczxGDGKcJEvZo3rE,7469
|
|
43
|
-
figpack/views/__init__.py,sha256=8y4KdRtrdDF0-xtQQkj4k_d8Ajk44Q7myztl3StdZcU,407
|
|
44
|
-
figpack-0.2.4.dist-info/licenses/LICENSE,sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ,11357
|
|
45
|
-
figpack-0.2.4.dist-info/METADATA,sha256=6sTrCsnt0haWZvUyuQdXXajQU8fyKtEtX0yFYN2JJ0U,5886
|
|
46
|
-
figpack-0.2.4.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
|
|
47
|
-
figpack-0.2.4.dist-info/entry_points.txt,sha256=l6d3siH2LxXa8qJGbjAqpIZtI5AkMSyDeoRDCzdrUto,45
|
|
48
|
-
figpack-0.2.4.dist-info/top_level.txt,sha256=lMKGaC5xWmAYBx9Ac1iMokm42KFnJFjmkP2ldyvOo-c,8
|
|
49
|
-
figpack-0.2.4.dist-info/RECORD,,
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|