figpack 0.2.26__py3-none-any.whl → 0.2.27__py3-none-any.whl

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Files changed (10) hide show
  1. figpack/__init__.py +1 -1
  2. figpack/figpack-figure-dist/assets/{index-BIw8xT5I.js → index-DnHZdWys.js} +15 -15
  3. figpack/figpack-figure-dist/index.html +1 -1
  4. figpack/views/TimeseriesGraph.py +24 -0
  5. {figpack-0.2.26.dist-info → figpack-0.2.27.dist-info}/METADATA +1 -1
  6. {figpack-0.2.26.dist-info → figpack-0.2.27.dist-info}/RECORD +10 -10
  7. {figpack-0.2.26.dist-info → figpack-0.2.27.dist-info}/WHEEL +0 -0
  8. {figpack-0.2.26.dist-info → figpack-0.2.27.dist-info}/entry_points.txt +0 -0
  9. {figpack-0.2.26.dist-info → figpack-0.2.27.dist-info}/licenses/LICENSE +0 -0
  10. {figpack-0.2.26.dist-info → figpack-0.2.27.dist-info}/top_level.txt +0 -0
figpack/figpack-figure-dist/index.html CHANGED
@@ -9,7 +9,7 @@
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  // Allow script injection from trusted domains (see src/main.tsx)
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  window.script_injection_allowed_domains = ['https://manage.figpack.org', 'https://figpack.org'];
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  </script>
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- <script type="module" crossorigin src="./assets/index-BIw8xT5I.js"></script>
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+ <script type="module" crossorigin src="./assets/index-DnHZdWys.js"></script>
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  <link rel="stylesheet" crossorigin href="./assets/index-V5m_wCvw.css">
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  </head>
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  <body>
figpack/views/TimeseriesGraph.py CHANGED
@@ -135,6 +135,8 @@ class TimeseriesGraph(FigpackView):
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  channel_names: Optional[List[str]] = None,
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  colors: Optional[List[str]] = None,
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  width: float = 1.0,
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+ channel_spacing: Optional[float] = None,
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+ auto_channel_spacing: Optional[float] = None,
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  ) -> None:
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  """
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  Add a uniform timeseries to the graph with optional multi-channel support
@@ -147,6 +149,8 @@ class TimeseriesGraph(FigpackView):
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  channel_names: Optional list of channel names
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  colors: Optional list of colors for each channel
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  width: Line width
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+ channel_spacing: Vertical spacing between channels
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+ auto_channel_spacing: sets channel spacing to this multiple of the estimated RMS noise level
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  """
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  self._series.append(
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  TGUniformSeries(
@@ -157,6 +161,8 @@ class TimeseriesGraph(FigpackView):
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  channel_names=channel_names,
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  colors=colors,
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  width=width,
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+ channel_spacing=channel_spacing,
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+ auto_channel_spacing=auto_channel_spacing,
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  )
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  )
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@@ -312,6 +318,8 @@ class TGUniformSeries:
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  channel_names: Optional[List[str]] = None,
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  colors: Optional[List[str]] = None,
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  width: float = 1.0,
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+ channel_spacing: Optional[float] = None,
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+ auto_channel_spacing: Optional[float] = None,
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  ):
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  assert sampling_frequency_hz > 0, "Sampling frequency must be positive"
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@@ -332,6 +340,19 @@ class TGUniformSeries:
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  self.sampling_frequency_hz = sampling_frequency_hz
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  self.data = data.astype(np.float32) # Ensure float32 for efficiency
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+ if auto_channel_spacing is not None:
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+ if channel_spacing is not None:
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+ raise ValueError(
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+ "Specify either channel_spacing or auto_channel_spacing, not both."
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+ )
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+ # Estimate RMS noise level across all channels using median absolute deviation
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+ mad = np.median(np.abs(self.data - np.median(self.data, axis=0)), axis=0)
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+ rms_estimate = mad / 0.6745 # Convert MAD to RMS estimate
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+ channel_spacing = auto_channel_spacing * np.median(rms_estimate)
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+ if channel_spacing <= 0:
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+ channel_spacing = 1.0 # Fallback to default spacing if estimate fails
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+ self.channel_spacing = channel_spacing
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+
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  # Set channel names
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  if channel_names is None:
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  if n_channels == 1:
@@ -512,6 +533,9 @@ class TGUniformSeries:
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  group.attrs["n_timepoints"] = n_timepoints
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  group.attrs["n_channels"] = n_channels
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+ if self.channel_spacing is not None:
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+ group.attrs["channel_spacing"] = self.channel_spacing
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+
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  # Store original data with optimal chunking
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  original_chunks = self._calculate_optimal_chunk_size(self.data.shape)
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  group.create_dataset(
{figpack-0.2.26.dist-info → figpack-0.2.27.dist-info}/METADATA RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: figpack
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- Version: 0.2.26
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+ Version: 0.2.27
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  Summary: A Python package for creating shareable, interactive visualizations in the browser
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  Author-email: Jeremy Magland <jmagland@flatironinstitute.org>
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  License: Apache-2.0
{figpack-0.2.26.dist-info → figpack-0.2.27.dist-info}/RECORD RENAMED
@@ -1,4 +1,4 @@
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- figpack/__init__.py,sha256=Jv-tIIfaFfxHPEguLd4YPpbcAk9OhoZIDMsQFKBD7O0,358
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+ figpack/__init__.py,sha256=zxhqr0lde2J_mnAi73-7r4CZptcqrtGZIZB7Tj5AJos,358
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  figpack/cli.py,sha256=s1mGQuFSntxiIvU6OWwHVlM9Cj-l1zMQ3OzFFe1-5ZE,11089
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  figpack/extensions.py,sha256=mILB4_F1RHkca4I7t88zh74IX8VCmfT7XFZZT4XYdNw,13009
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  figpack/core/__init__.py,sha256=7zU6O1piTk07aeCfbU81QqTgSHIO2n5MZ4LFNmsrtfs,192
@@ -14,8 +14,8 @@ figpack/core/extension_view.py,sha256=FSBXdhFEWicLi0jhkuRdS-a8CNsULrEqqIKtYfV3tm
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  figpack/core/figpack_extension.py,sha256=KSJKlnLYueFnGa8QFMpbIF3CDMwnIZJOqsI0smz6cUc,2252
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  figpack/core/figpack_view.py,sha256=rD94SehOcb_OVlZJuVK9UdH-dOJ-Mjlvg5cX1JEoH0w,6853
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  figpack/core/zarr.py,sha256=LTWOIX6vuH25STYTQS9_apfnfYXmATAEQkil3z9eYKE,1634
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- figpack/figpack-figure-dist/index.html,sha256=MHPJgSe_SmUGZZ-mRto7T_aYxAHiIo05NvZFMMQl7NY,688
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- figpack/figpack-figure-dist/assets/index-BIw8xT5I.js,sha256=OBlAK69xpfSpIsPtiVq2kJ2acxkGkMHYbNriBCP8-PU,1108366
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+ figpack/figpack-figure-dist/index.html,sha256=RA68WkQC-75AbzX32U3SGbbipP9NpkAMSXJWrfVCPkI,688
18
+ figpack/figpack-figure-dist/assets/index-DnHZdWys.js,sha256=YxHgJeAv3feDI2INjrt9_7a86niyJ8eL7gqaRxU-Zs4,1108653
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  figpack/figpack-figure-dist/assets/index-V5m_wCvw.css,sha256=WRtQLW6SNlTlLtepSOt89t1z41SD7XzYUyRldqowjMM,7286
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  figpack/figpack-figure-dist/assets/neurosift-logo-CLsuwLMO.png,sha256=g5m-TwrGh5f6-9rXtWV-znH4B0nHgc__0GWclRDLUHs,9307
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  figpack/views/Box.py,sha256=oN_OJH2pK_hH26k0eFCFjlfuJssVqKvw20GxYK1HX7g,2419
@@ -33,15 +33,15 @@ figpack/views/Spectrogram.py,sha256=jcm26ucHedKDnBA5xnAUu9tW-g-ZutT-kw1EIhYm66E,
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  figpack/views/Splitter.py,sha256=BR2L-8aqicTubS1rSzsQ3XnhoJcX5GcfEnVWtEWEs0w,2016
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  figpack/views/TabLayout.py,sha256=AqdHPLcP2-caWjxbkC8r8m60z8n_eyZrIBGOOPSVNCs,1908
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  figpack/views/TabLayoutItem.py,sha256=xmHA0JsW_6naJze4_mQuP_Fy0Nm17p2N7w_AsmVRp8k,880
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- figpack/views/TimeseriesGraph.py,sha256=QL2eVqzB5QiGkIO5-vVf6PD9E0AHffI6VJeWvxsQ9HM,17691
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+ figpack/views/TimeseriesGraph.py,sha256=ygbgB83CIc5z_FN6gedWB_KIGh9Zo6LwrCafJqWckfU,19011
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  figpack/views/__init__.py,sha256=V09R6vFRzhY7ANevWomM7muFfUieXZEjGimPiMHpey4,641
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  figpack/views/PlotlyExtension/PlotlyExtension.py,sha256=LOFSqbm46UZ7HsHTDxUPnNB33ydYQvEkRVK-TSKkzK4,2149
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  figpack/views/PlotlyExtension/__init__.py,sha256=80Wy1mDMWyagjuR99ECxJePIYpRQ6TSyHkB0uZoBZ_0,70
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  figpack/views/PlotlyExtension/_plotly_extension.py,sha256=yZjG1NMGlQedeeLdV6TQWpi_NTm5Wfk5eWbXEdZbbFE,1455
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  figpack/views/PlotlyExtension/plotly_view.js,sha256=9BjgOPkqGl87SSonnb48nFeQV3UTIi1trpSPxd9qlKo,3055
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- figpack-0.2.26.dist-info/licenses/LICENSE,sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ,11357
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- figpack-0.2.26.dist-info/METADATA,sha256=B9KhbjfvtLQGzbfIGDHqoFe7Iu7CPl99YkJ1YJ6iOPw,4618
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- figpack-0.2.26.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
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- figpack-0.2.26.dist-info/entry_points.txt,sha256=l6d3siH2LxXa8qJGbjAqpIZtI5AkMSyDeoRDCzdrUto,45
46
- figpack-0.2.26.dist-info/top_level.txt,sha256=lMKGaC5xWmAYBx9Ac1iMokm42KFnJFjmkP2ldyvOo-c,8
47
- figpack-0.2.26.dist-info/RECORD,,
42
+ figpack-0.2.27.dist-info/licenses/LICENSE,sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ,11357
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+ figpack-0.2.27.dist-info/METADATA,sha256=1_RNdRpyaQQaJD0ZoqyWjWNAn2WcgrIdlfDLfFGYtes,4618
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+ figpack-0.2.27.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
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+ figpack-0.2.27.dist-info/entry_points.txt,sha256=l6d3siH2LxXa8qJGbjAqpIZtI5AkMSyDeoRDCzdrUto,45
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+ figpack-0.2.27.dist-info/top_level.txt,sha256=lMKGaC5xWmAYBx9Ac1iMokm42KFnJFjmkP2ldyvOo-c,8
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+ figpack-0.2.27.dist-info/RECORD,,