figpack 0.2.15__py3-none-any.whl → 0.2.17__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (53) hide show
  1. figpack/__init__.py +4 -3
  2. figpack/core/__init__.py +2 -2
  3. figpack/core/_bundle_utils.py +80 -33
  4. figpack/core/_view_figure.py +1 -1
  5. figpack/core/extension_view.py +9 -27
  6. figpack/core/figpack_extension.py +0 -71
  7. figpack/core/figpack_view.py +2 -2
  8. figpack/core/zarr.py +61 -0
  9. figpack/figpack-figure-dist/assets/index-DBwmtEpB.js +91 -0
  10. figpack/figpack-figure-dist/assets/{index-D9a3K6eW.css → index-DHWczh-Q.css} +1 -1
  11. figpack/figpack-figure-dist/index.html +2 -2
  12. figpack/views/Box.py +2 -3
  13. figpack/views/DataFrame.py +6 -12
  14. figpack/views/Gallery.py +2 -3
  15. figpack/views/Image.py +3 -9
  16. figpack/views/Markdown.py +3 -4
  17. figpack/views/MatplotlibFigure.py +2 -11
  18. figpack/views/MultiChannelTimeseries.py +2 -6
  19. figpack/views/PlotlyExtension/PlotlyExtension.py +8 -60
  20. figpack/views/PlotlyExtension/_plotly_extension.py +46 -0
  21. figpack/views/PlotlyExtension/plotly_view.js +84 -80
  22. figpack/views/Spectrogram.py +2 -7
  23. figpack/views/Splitter.py +2 -3
  24. figpack/views/TabLayout.py +2 -3
  25. figpack/views/TimeseriesGraph.py +6 -10
  26. figpack/views/__init__.py +1 -0
  27. {figpack-0.2.15.dist-info → figpack-0.2.17.dist-info}/METADATA +21 -2
  28. figpack-0.2.17.dist-info/RECORD +43 -0
  29. figpack/figpack-figure-dist/assets/index-DtOnN02w.js +0 -846
  30. figpack/franklab/__init__.py +0 -5
  31. figpack/franklab/views/TrackAnimation.py +0 -153
  32. figpack/franklab/views/__init__.py +0 -9
  33. figpack/spike_sorting/__init__.py +0 -5
  34. figpack/spike_sorting/views/AutocorrelogramItem.py +0 -32
  35. figpack/spike_sorting/views/Autocorrelograms.py +0 -118
  36. figpack/spike_sorting/views/AverageWaveforms.py +0 -147
  37. figpack/spike_sorting/views/CrossCorrelogramItem.py +0 -35
  38. figpack/spike_sorting/views/CrossCorrelograms.py +0 -132
  39. figpack/spike_sorting/views/RasterPlot.py +0 -288
  40. figpack/spike_sorting/views/RasterPlotItem.py +0 -28
  41. figpack/spike_sorting/views/SpikeAmplitudes.py +0 -374
  42. figpack/spike_sorting/views/SpikeAmplitudesItem.py +0 -38
  43. figpack/spike_sorting/views/UnitMetricsGraph.py +0 -129
  44. figpack/spike_sorting/views/UnitSimilarityScore.py +0 -40
  45. figpack/spike_sorting/views/UnitsTable.py +0 -89
  46. figpack/spike_sorting/views/UnitsTableColumn.py +0 -40
  47. figpack/spike_sorting/views/UnitsTableRow.py +0 -36
  48. figpack/spike_sorting/views/__init__.py +0 -41
  49. figpack-0.2.15.dist-info/RECORD +0 -60
  50. {figpack-0.2.15.dist-info → figpack-0.2.17.dist-info}/WHEEL +0 -0
  51. {figpack-0.2.15.dist-info → figpack-0.2.17.dist-info}/entry_points.txt +0 -0
  52. {figpack-0.2.15.dist-info → figpack-0.2.17.dist-info}/licenses/LICENSE +0 -0
  53. {figpack-0.2.15.dist-info → figpack-0.2.17.dist-info}/top_level.txt +0 -0
@@ -4,9 +4,8 @@ TabLayout view for figpack - a tabbed layout container that handles other views
4
4
 
5
5
  from typing import Any, Dict, List, Optional
6
6
 
7
- import zarr
8
-
9
7
  from ..core.figpack_view import FigpackView
8
+ from ..core.zarr import Group
10
9
  from .TabLayoutItem import TabLayoutItem
11
10
 
12
11
 
@@ -33,7 +32,7 @@ class TabLayout(FigpackView):
33
32
  max(0, min(initial_tab_index, len(items) - 1)) if items else 0
34
33
  )
35
34
 
36
- def _write_to_zarr_group(self, group: zarr.Group) -> None:
35
+ def _write_to_zarr_group(self, group: Group) -> None:
37
36
  """
38
37
  Write the TabLayout data to a Zarr group
39
38
 
@@ -6,9 +6,9 @@ import math
6
6
  from typing import Any, Dict, List, Optional, Union
7
7
 
8
8
  import numpy as np
9
- import zarr
10
9
 
11
10
  from ..core.figpack_view import FigpackView
11
+ from ..core.zarr import Group
12
12
 
13
13
 
14
14
  class TimeseriesGraph(FigpackView):
@@ -160,7 +160,7 @@ class TimeseriesGraph(FigpackView):
160
160
  )
161
161
  )
162
162
 
163
- def _write_to_zarr_group(self, group: zarr.Group) -> None:
163
+ def _write_to_zarr_group(self, group: Group) -> None:
164
164
  """
165
165
  Write the graph data to a Zarr group
166
166
 
@@ -217,7 +217,7 @@ class TGLineSeries:
217
217
 
218
218
  def _write_to_zarr_group(
219
219
  self,
220
- group: zarr.Group,
220
+ group: Group,
221
221
  ) -> None:
222
222
  group.attrs["series_type"] = "line"
223
223
  group.attrs["color"] = self.color
@@ -248,7 +248,7 @@ class TGMarkerSeries:
248
248
  self.radius = radius
249
249
  self.shape = shape
250
250
 
251
- def _write_to_zarr_group(self, group: zarr.Group) -> None:
251
+ def _write_to_zarr_group(self, group: Group) -> None:
252
252
  """
253
253
  Write the marker series data to a Zarr dataset
254
254
 
@@ -287,7 +287,7 @@ class TGIntervalSeries:
287
287
  self.color = color
288
288
  self.alpha = alpha
289
289
 
290
- def _write_to_zarr_group(self, group: zarr.Group) -> None:
290
+ def _write_to_zarr_group(self, group: Group) -> None:
291
291
  """
292
292
  Write the interval series data to a Zarr dataset
293
293
 
@@ -492,7 +492,7 @@ class TGUniformSeries:
492
492
  else: # len(shape) == 3
493
493
  return (chunk_timepoints, 2, n_channels)
494
494
 
495
- def _write_to_zarr_group(self, group: zarr.Group) -> None:
495
+ def _write_to_zarr_group(self, group: Group) -> None:
496
496
  """
497
497
  Write the uniform series data to a Zarr group
498
498
 
@@ -518,8 +518,6 @@ class TGUniformSeries:
518
518
  "data",
519
519
  data=self.data,
520
520
  chunks=original_chunks,
521
- compression="blosc",
522
- compression_opts={"cname": "lz4", "clevel": 5, "shuffle": 1},
523
521
  )
524
522
 
525
523
  # Store downsampled data arrays
@@ -536,6 +534,4 @@ class TGUniformSeries:
536
534
  dataset_name,
537
535
  data=downsampled_array,
538
536
  chunks=ds_chunks,
539
- compression="blosc",
540
- compression_opts={"cname": "lz4", "clevel": 5, "shuffle": 1},
541
537
  )
figpack/views/__init__.py CHANGED
@@ -12,4 +12,5 @@ from .Splitter import Splitter
12
12
  from .TabLayout import TabLayout
13
13
  from .TabLayoutItem import TabLayoutItem
14
14
  from .TimeseriesGraph import TimeseriesGraph
15
+
15
16
  from .PlotlyExtension import PlotlyFigure
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: figpack
3
- Version: 0.2.15
3
+ Version: 0.2.17
4
4
  Summary: A Python package for creating shareable, interactive visualizations in the browser
5
5
  Author-email: Jeremy Magland <jmagland@flatironinstitute.org>
6
6
  License: Apache-2.0
@@ -25,7 +25,7 @@ Requires-Python: >=3.8
25
25
  Description-Content-Type: text/markdown
26
26
  License-File: LICENSE
27
27
  Requires-Dist: numpy
28
- Requires-Dist: zarr<3
28
+ Requires-Dist: zarr
29
29
  Requires-Dist: requests
30
30
  Requires-Dist: psutil
31
31
  Provides-Extra: test
@@ -37,6 +37,25 @@ Requires-Dist: matplotlib; extra == "test"
37
37
  Requires-Dist: plotly; extra == "test"
38
38
  Requires-Dist: Pillow; extra == "test"
39
39
  Requires-Dist: pandas; extra == "test"
40
+ Provides-Extra: test-zarr2
41
+ Requires-Dist: pytest>=7.0; extra == "test-zarr2"
42
+ Requires-Dist: pytest-cov>=4.0; extra == "test-zarr2"
43
+ Requires-Dist: pytest-mock>=3.10; extra == "test-zarr2"
44
+ Requires-Dist: spikeinterface; extra == "test-zarr2"
45
+ Requires-Dist: matplotlib; extra == "test-zarr2"
46
+ Requires-Dist: plotly; extra == "test-zarr2"
47
+ Requires-Dist: Pillow; extra == "test-zarr2"
48
+ Requires-Dist: pandas; extra == "test-zarr2"
49
+ Requires-Dist: zarr<3; extra == "test-zarr2"
50
+ Provides-Extra: test-zarr3
51
+ Requires-Dist: pytest>=7.0; extra == "test-zarr3"
52
+ Requires-Dist: pytest-cov>=4.0; extra == "test-zarr3"
53
+ Requires-Dist: pytest-mock>=3.10; extra == "test-zarr3"
54
+ Requires-Dist: matplotlib; extra == "test-zarr3"
55
+ Requires-Dist: plotly; extra == "test-zarr3"
56
+ Requires-Dist: Pillow; extra == "test-zarr3"
57
+ Requires-Dist: pandas; extra == "test-zarr3"
58
+ Requires-Dist: zarr>=3; extra == "test-zarr3"
40
59
  Provides-Extra: dev
41
60
  Requires-Dist: pytest>=7.0; extra == "dev"
42
61
  Requires-Dist: pytest-cov>=4.0; extra == "dev"
@@ -0,0 +1,43 @@
1
+ figpack/__init__.py,sha256=L7c_2dCG-hFepQwb5tqJ_TQCeC9EcG_8Ckw-G0qzJQo,358
2
+ figpack/cli.py,sha256=xWF7J2BxUqOLvPu-Kje7Q6oGukTroXsLq8WN8vJgyw0,8321
3
+ figpack/core/__init__.py,sha256=7zU6O1piTk07aeCfbU81QqTgSHIO2n5MZ4LFNmsrtfs,192
4
+ figpack/core/_bundle_utils.py,sha256=Wkk8UjR51bBbIDjXPaZLUlUnSGXdQDLzh7c6fcmBiag,7976
5
+ figpack/core/_save_figure.py,sha256=52ny-m1ThGgxY4ZgMn7m33n8A2OCyezj8H8TMvw0Y8Q,1043
6
+ figpack/core/_server_manager.py,sha256=BTLeZtSbaJtAmtslAfgvp9C-SV0aJnn4WCpUJzd1Mlg,10997
7
+ figpack/core/_show_view.py,sha256=-5HT1MYSeVuEoaL3RNNyoCjYsZy4Jy9XLjljUqLuvV4,5146
8
+ figpack/core/_upload_bundle.py,sha256=54hdWayJJdRZdx7N9V2aH_X33KkR6hImMjN6tkBTLi8,14894
9
+ figpack/core/_view_figure.py,sha256=xKmOdrqV-tQTRAK3n3eQx75de5el2KNIbHXdkCIqxSg,4201
10
+ figpack/core/config.py,sha256=oOR7SlP192vuFhYlS-h14HnG-kd_3gaz0vshXch2RNc,173
11
+ figpack/core/extension_view.py,sha256=MUj66ccjQJGyOyHzyYNwMd84isN2DfEoZ3X-TSzemAs,1257
12
+ figpack/core/figpack_extension.py,sha256=KSJKlnLYueFnGa8QFMpbIF3CDMwnIZJOqsI0smz6cUc,2252
13
+ figpack/core/figpack_view.py,sha256=L--pBg-PjEiAE2Ry4u-1eZsRVu4j4-p-NKwtJSVnGj0,6304
14
+ figpack/core/zarr.py,sha256=LTWOIX6vuH25STYTQS9_apfnfYXmATAEQkil3z9eYKE,1634
15
+ figpack/figpack-figure-dist/index.html,sha256=-AYJ73sdkHFMO42neJncqX7JL6z6fwKb85GZ5ms3-PU,486
16
+ figpack/figpack-figure-dist/assets/index-DBwmtEpB.js,sha256=AqunXLMdM90hYVSFwRIZGfXHjTxRGS_yxaXuHQGN_K8,1098361
17
+ figpack/figpack-figure-dist/assets/index-DHWczh-Q.css,sha256=h2S75Y8qya6YPwvhWjYeFT54ILGWge4mCBsOW84OFhg,4859
18
+ figpack/figpack-figure-dist/assets/neurosift-logo-CLsuwLMO.png,sha256=g5m-TwrGh5f6-9rXtWV-znH4B0nHgc__0GWclRDLUHs,9307
19
+ figpack/views/Box.py,sha256=dH4Vxax4NPJExZSx8jAG6feMgkNU5mOPEf-lLOd41-4,2421
20
+ figpack/views/DataFrame.py,sha256=FAqrEddh3v0MNXlXA1DQzN34d9gacDXHUdiahIKlgOI,3401
21
+ figpack/views/Gallery.py,sha256=D6drCKfnPN6MNn3wjQV0i5FW2s3q9xP-X75q-PR4Sc8,3326
22
+ figpack/views/GalleryItem.py,sha256=b_upJno5P3ANSulbG-h3t6Xj56tPGJ7iVxqyiZu3zaQ,1244
23
+ figpack/views/Image.py,sha256=8eNWzednvpsz0EcaoK3GdWGBfCybT2pXnBhMlZMr4yA,3742
24
+ figpack/views/LayoutItem.py,sha256=wy8DggkIzZpU0F1zFIBceS7HpBb6lu-A3hpYINQzedk,1595
25
+ figpack/views/Markdown.py,sha256=8kScwS1XaiQt5KRcbWG1B4RNUbA_FG5fIUJcv6csB8g,1134
26
+ figpack/views/MatplotlibFigure.py,sha256=v4rc8sT9FcuHPrwljq9s-BUT5vlJiRDAf5tBP4YujAE,2423
27
+ figpack/views/MultiChannelTimeseries.py,sha256=loZ1zGyIC_VJbduR7EIBbFHFPEr8DRQw-QNQSFVSdHQ,8292
28
+ figpack/views/Spectrogram.py,sha256=9aJpzlOsOo7ReddR-i6riN2MG2RdveRS7m6MI2cCYjM,9336
29
+ figpack/views/Splitter.py,sha256=q29pBu4RJgr0o_m1Jliv5FrGGCm5_jhowMg8Xgh70gk,2019
30
+ figpack/views/TabLayout.py,sha256=bKLjeI_CnllThB6t7AwlP-Oh5mKbWt8hpubW5Zyj420,1910
31
+ figpack/views/TabLayoutItem.py,sha256=xmHA0JsW_6naJze4_mQuP_Fy0Nm17p2N7w_AsmVRp8k,880
32
+ figpack/views/TimeseriesGraph.py,sha256=VErwmzRqNFq1i2XEWzAHM6csbHry064did32AbxLMms,17700
33
+ figpack/views/__init__.py,sha256=jquSaF1bU_oT9oV-2KfFKiRb_CG-UGXFpFygGswHO2k,547
34
+ figpack/views/PlotlyExtension/PlotlyExtension.py,sha256=W8ucSnAaPOHVGvOXRt0DpdgGNLQRmfUUdKzHICuJKJ0,2151
35
+ figpack/views/PlotlyExtension/__init__.py,sha256=80Wy1mDMWyagjuR99ECxJePIYpRQ6TSyHkB0uZoBZ_0,70
36
+ figpack/views/PlotlyExtension/_plotly_extension.py,sha256=yZjG1NMGlQedeeLdV6TQWpi_NTm5Wfk5eWbXEdZbbFE,1455
37
+ figpack/views/PlotlyExtension/plotly_view.js,sha256=9BjgOPkqGl87SSonnb48nFeQV3UTIi1trpSPxd9qlKo,3055
38
+ figpack-0.2.17.dist-info/licenses/LICENSE,sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ,11357
39
+ figpack-0.2.17.dist-info/METADATA,sha256=AUDz3kVzdsB1qR9a4KCQ77B0rlYmNyQKeRK1I4K6oFY,4501
40
+ figpack-0.2.17.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
41
+ figpack-0.2.17.dist-info/entry_points.txt,sha256=l6d3siH2LxXa8qJGbjAqpIZtI5AkMSyDeoRDCzdrUto,45
42
+ figpack-0.2.17.dist-info/top_level.txt,sha256=lMKGaC5xWmAYBx9Ac1iMokm42KFnJFjmkP2ldyvOo-c,8
43
+ figpack-0.2.17.dist-info/RECORD,,