fhir-sheets 1.2.1__py3-none-any.whl → 1.3.0__py3-none-any.whl
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- fhir_sheets/core/conversion.py +13 -1
- fhir_sheets/core/fhir_formatting.py +1 -1
- {fhir_sheets-1.2.1.dist-info → fhir_sheets-1.3.0.dist-info}/METADATA +4 -2
- {fhir_sheets-1.2.1.dist-info → fhir_sheets-1.3.0.dist-info}/RECORD +6 -6
- {fhir_sheets-1.2.1.dist-info → fhir_sheets-1.3.0.dist-info}/WHEEL +1 -1
- {fhir_sheets-1.2.1.dist-info → fhir_sheets-1.3.0.dist-info/licenses}/LICENSE +0 -0
fhir_sheets/core/conversion.py
CHANGED
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@@ -32,6 +32,13 @@ def initialize_bundle():
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root_bundle = {}
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root_bundle['resourceType'] = 'Bundle'
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root_bundle['id'] = str(uuid.uuid4())
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root_bundle['meta'] = {
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'security': [{
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'system': 'http://terminology.hl7.org/CodeSystem/v3-ActReason',
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'code': 'HTEST',
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'display': 'test health data'
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}]
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}
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root_bundle['type'] = 'transaction'
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root_bundle['entry'] = []
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return root_bundle
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@@ -43,7 +50,12 @@ def initialize_resource(resource_definition):
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initial_resource['id'] = str(uuid.uuid4()).strip()
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if resource_definition.profiles:
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initial_resource['meta'] = {
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'profile': resource_definition.profiles
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'profile': resource_definition.profiles,
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'security': [{
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'system': 'http://terminology.hl7.org/CodeSystem/v3-ActReason',
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'code': 'HTEST',
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'display': 'test health data'
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}]
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}
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return initial_resource
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@@ -196,7 +196,7 @@ def parse_flexible_address(address):
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country_pattern = r'(?:\s*(?P<country>[\w\s]+|))?$'
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# Compile the full pattern to match the postal code, state, and country
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full_pattern = rf'^(?P<line>.*?)\^(?P<city>.*?)\^(?P<district>.*?)\^{
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full_pattern = rf'^(?P<line>.*?)\^(?P<city>.*?)\^(?P<district>.*?)\^{postal_code_pattern}\^{state_pattern}\^{country_pattern}'
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match = re.search(full_pattern, address)
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@@ -1,12 +1,14 @@
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1
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Metadata-Version: 2.
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Metadata-Version: 2.4
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Name: fhir-sheets
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Version: 1.
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Version: 1.3.0
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Summary: FhirSheets is a command-line tool that reads an Excel file in FHIR cohort format and generates FHIR bundle JSON files from it. Each row in the template Excel file is used to create an individual JSON file, outputting them to a specified folder.
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License-File: LICENSE
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Author: Michael Riley
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Author-email: Michael.Riley@gtri.gatech.edu
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Requires-Python: >=3.13
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Classifier: Programming Language :: Python :: 3
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Classifier: Programming Language :: Python :: 3.13
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Classifier: Programming Language :: Python :: 3.14
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Requires-Dist: et-xmlfile (==1.1.0)
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Requires-Dist: jsonpath-ng (==1.6.1)
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Requires-Dist: openpyxl (==3.1.5)
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@@ -2,15 +2,15 @@ fhir_sheets/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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fhir_sheets/cli/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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fhir_sheets/cli/main.py,sha256=UlQn3i_aaZEpCk7DaOQwiRRQoL7-lup_HepbR7x-Qkc,2668
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fhir_sheets/core/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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fhir_sheets/core/conversion.py,sha256=
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fhir_sheets/core/fhir_formatting.py,sha256=
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fhir_sheets/core/conversion.py,sha256=a1ZkKZ2fEdGQLyThZNyOBcOT0r9DARCxeFcbL9Dnhfk,18911
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fhir_sheets/core/fhir_formatting.py,sha256=eNM38Cp7TEdND1fIKhp2HTwzGYDqgWtr13A1qRT06cY,13011
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fhir_sheets/core/model/cohort_data_entity.py,sha256=rcPwn_FecsYkX0wgi7DaZMBXJ43S8a5tg4Lxnp6PCyQ,3308
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fhir_sheets/core/model/resource_definition_entity.py,sha256=NYOBjGz2LyfjI9LVl7j34fcAp-qEmzrBTg9ZLpFfDxA,738
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fhir_sheets/core/model/resource_link_entity.py,sha256=-iCzGaKJt5ZISTSwBVmEuLIKzgRtbL_I7JRpoEc89h0,812
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fhir_sheets/core/read_input.py,sha256=08MFs_dxv-QidrloSS1w40CH-4__1M5Loq_rufb8aBc,5810
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fhir_sheets/core/special_values.py,sha256=KwpJLggH3-BSH8NrGtRTtVBz0fl-iH7swxPwBb3iMx4,15513
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fhir_sheets/core/util.py,sha256=gudEPi_xTDC9YHqUlGEkn_tA26HbhNjuqGgjtuOEINk,9
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fhir_sheets-1.
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fhir_sheets-1.
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fhir_sheets-1.
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fhir_sheets-1.
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fhir_sheets-1.3.0.dist-info/METADATA,sha256=bdnzbYz0J2kVTDMxc4CFrXdPrfgpXWySUOFypmJZw84,2911
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fhir_sheets-1.3.0.dist-info/WHEEL,sha256=zp0Cn7JsFoX2ATtOhtaFYIiE2rmFAD4OcMhtUki8W3U,88
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fhir_sheets-1.3.0.dist-info/licenses/LICENSE,sha256=Qv2ilebwoUtMJnRsZwRy729xS5JZQzLauJ0tQzkAkTA,1088
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fhir_sheets-1.3.0.dist-info/RECORD,,
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File without changes
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