fetchm2 0.1.0__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (20) hide show
  1. fetchm2/__init__.py +6 -0
  2. fetchm2/audit.py +126 -0
  3. fetchm2/cli.py +175 -0
  4. fetchm2/data/__init__.py +2 -0
  5. fetchm2/data/approved_broad_categories.csv +51 -0
  6. fetchm2/data/controlled_categories.csv +7506 -0
  7. fetchm2/data/country_mapping.json +810 -0
  8. fetchm2/data/geography_reviewed_rules.csv +17 -0
  9. fetchm2/data/host_negative_rules.csv +409 -0
  10. fetchm2/data/host_synonyms.csv +7114 -0
  11. fetchm2/metadata.py +244 -0
  12. fetchm2/sequence.py +194 -0
  13. fetchm2/standardization.py +586 -0
  14. fetchm2/utils.py +54 -0
  15. fetchm2-0.1.0.dist-info/METADATA +208 -0
  16. fetchm2-0.1.0.dist-info/RECORD +20 -0
  17. fetchm2-0.1.0.dist-info/WHEEL +5 -0
  18. fetchm2-0.1.0.dist-info/entry_points.txt +3 -0
  19. fetchm2-0.1.0.dist-info/licenses/LICENSE +21 -0
  20. fetchm2-0.1.0.dist-info/top_level.txt +1 -0
fetchm2/data/geography_reviewed_rules.csv ADDED
@@ -0,0 +1,17 @@
1
+ source_value,country,note
2
+ "USA","United States","Reviewed exact host-field value."
3
+ "soil around the Arctic Ocean","Arctic Ocean","Reviewed secondary geography evidence."
4
+ "Blood - animal United Kingdom","United Kingdom","Reviewed secondary geography evidence."
5
+ "Soil, Moscow, USSR","Northern Asia","Reviewed historical/region geography evidence."
6
+ "Gulf of Mexico","Mexico","Reviewed secondary geography evidence."
7
+ "seawater off the coast of Georgia","Georgia","Reviewed secondary geography evidence."
8
+ "Arctic Ocean sediment","Arctic Ocean","Reviewed secondary geography evidence."
9
+ "Blue Lagoon, Iceland at 20 cm","Iceland","Reviewed secondary geography evidence."
10
+ "The Mediterranean Sea","Mediterranean Sea","Reviewed secondary geography evidence."
11
+ "Boston Harbor Massachusetts, United States isolation date: 1999","United States","Reviewed secondary geography evidence."
12
+ "plant (bean pod) Australia","Australia","Reviewed secondary geography evidence."
13
+ "oral cavity - animal (dental plaque of dairy cattle, Belfast, Northern) Belfast Ireland","Ireland","Reviewed secondary geography evidence."
14
+ "Clinical specimen - human Pennsylvania, United States isolation date: 1988","United States","Reviewed secondary geography evidence."
15
+ "Blood - human Jonkoping Sweden isolation date: 1993","Sweden","Reviewed secondary geography evidence."
16
+ "Alkaline Kenya isolation date: June, 2002","Kenya","Reviewed secondary geography evidence."
17
+ "Blood - human Houston Texas, United States isolation date: January 18, 2000","United States","Reviewed secondary geography evidence."
fetchm2/data/host_negative_rules.csv ADDED
@@ -0,0 +1,409 @@
1
+ synonym,decision,note
2
+ sea,non_host_source,Post-audit correction 2026-04-30: ambiguous marine/source word was over-mapped to a Lepidoptera genus; keep out of Host_SD unless manually curated with stronger context.
3
+ sea water,non_host_source,Post-audit correction 2026-04-30: marine water/source material
4
+ seawater,non_host_source,Post-audit correction 2026-04-30: marine water/source material
5
+ deep sea water,non_host_source,Post-audit correction 2026-04-30: marine water/source material
6
+ deep-sea water,non_host_source,Post-audit correction 2026-04-30: marine water/source material
7
+ brackish water,non_host_source,Post-audit correction 2026-04-30: water/source material
8
+ baltic sea water,non_host_source,Post-audit correction 2026-04-30: marine water/source material
9
+ sewage plant,non_host_source,Post-audit correction 2026-04-30: wastewater facility/source context; batch1 reviewed source/environment descriptor; block from Host_SD
10
+ bacteria culture,non_host_source,Post-audit correction 2026-04-30: microbial culture descriptor; batch1 reviewed non-host culture/lab artifact; block from Host_SD
11
+ bacterial culture,non_host_source,Post-audit correction 2026-04-30: microbial culture descriptor
12
+ microbial culture,non_host_source,Post-audit correction 2026-04-30: microbial culture descriptor
13
+ "N. Ennis, Tisa lab UNH",non_host_source,AI reviewed approve_blank: Looks like person/institution/lab descriptor rather than biological host.
14
+ Instituto de Productos Lacteos de Asturias (IPLA)-CSIC,non_host_source,AI reviewed approve_blank: Looks like person/institution/lab descriptor rather than biological host.
15
+ Chiu-Chung Young,non_host_source,AI reviewed approve_blank: Looks like person/institution/lab descriptor rather than biological host.
16
+ Pickle,non_host_source,AI reviewed apply_only_if_host_empty: Non-host/source material; safe only when not overwriting a real Host_SD.
17
+ Sand Borer,non_host_source,AI reviewed apply_only_if_host_empty: Non-host/source material; safe only when not overwriting a real Host_SD.
18
+ deep-sea sediments,non_host_source,AI reviewed apply_only_if_host_empty: Non-host/source material; safe only when not overwriting a real Host_SD.
19
+ Dove (unknown),not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
20
+ lake,non_host_source,AI reviewed apply_only_if_host_empty: Non-host/source material; safe only when not overwriting a real Host_SD.
21
+ Hanbang bio lab,non_host_source,AI reviewed approve_blank: Looks like person/institution/lab descriptor rather than biological host.
22
+ laboratory of anaerobic microorganisms,non_host_source,AI reviewed approve_blank: Looks like person/institution/lab descriptor rather than biological host.
23
+ Laboratory of Bionanotechnology,non_host_source,AI reviewed approve_blank: Looks like person/institution/lab descriptor rather than biological host.
24
+ "LBBMA, Federal University of Vicosa",non_host_source,AI reviewed approve_blank: Looks like person/institution/lab descriptor rather than biological host.
25
+ "Amity Institute of Biotechnology, Rajasthan",non_host_source,AI reviewed approve_blank: Looks like person/institution/lab descriptor rather than biological host.
26
+ Grown in Campylobacter selective agar.,non_host_source,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
27
+ "Molecular Diagnostics Laboratory, Research Center of Biotechnology of the Russian Academy of Sciences",non_host_source,AI reviewed approve_blank: Looks like person/institution/lab descriptor rather than biological host.
28
+ Psitacine (unknown),not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
29
+ Lab-generated mutant 1,non_host_source,AI reviewed approve_blank: Looks like person/institution/lab descriptor rather than biological host.
30
+ clostridium,non_host_source,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
31
+ Dr. Ting Zhou Lab,non_host_source,AI reviewed approve_blank: Looks like person/institution/lab descriptor rather than biological host.
32
+ 0,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
33
+ 1009,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
34
+ 1591,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
35
+ 104,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
36
+ 1589,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
37
+ 275,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
38
+ 251,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
39
+ 355,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
40
+ 245,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
41
+ 313,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
42
+ 236,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
43
+ 291,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
44
+ 429,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
45
+ 260,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
46
+ 341,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
47
+ 266,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
48
+ 314,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
49
+ 253,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
50
+ 435,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
51
+ 15,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
52
+ 1010,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
53
+ 1013,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
54
+ 384,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
55
+ 112,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
56
+ 1592,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
57
+ 829,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
58
+ 841,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
59
+ 854,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
60
+ 849,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
61
+ 848,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
62
+ 847,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
63
+ 846,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
64
+ 844,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
65
+ 843,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
66
+ 842,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
67
+ 853,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
68
+ 287,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
69
+ 851,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
70
+ 87,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
71
+ 178,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
72
+ 850,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
73
+ 832,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
74
+ 834,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
75
+ 207,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
76
+ 831,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
77
+ 888,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
78
+ 1008,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
79
+ 1005,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
80
+ 845,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
81
+ 461,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
82
+ 4579,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
83
+ 197,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
84
+ 323,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
85
+ 679,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
86
+ 1421,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
87
+ 1420,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
88
+ 1419,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
89
+ 1422,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
90
+ 1424,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
91
+ 1425,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
92
+ 4571,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
93
+ 830,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
94
+ 2219,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
95
+ 3394,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
96
+ 59,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
97
+ 362,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
98
+ 760,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
99
+ 2979,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
100
+ 234,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
101
+ 381,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
102
+ 449,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
103
+ 3367,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
104
+ 58,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
105
+ 479,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
106
+ 1004,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
107
+ 539,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
108
+ 1002,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
109
+ 195,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
110
+ 1001,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
111
+ 114,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
112
+ 31,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
113
+ 998,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
114
+ 989,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
115
+ 215,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
116
+ 220,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
117
+ 991,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
118
+ 189,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
119
+ 225,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
120
+ 126,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
121
+ 81,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
122
+ 368,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
123
+ 145,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
124
+ 16,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
125
+ 26,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
126
+ 458,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
127
+ 3,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
128
+ 3396,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
129
+ 329,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
130
+ 1423,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
131
+ 295,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
132
+ 451,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
133
+ 2995,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
134
+ 3357,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
135
+ 244,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
136
+ 277,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
137
+ 231,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
138
+ 678,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
139
+ 544,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
140
+ 3775,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
141
+ 996,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
142
+ 3003,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
143
+ 283,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
144
+ 252,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
145
+ 581,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
146
+ 3303,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
147
+ 2985,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
148
+ 2402,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
149
+ 408,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
150
+ 3389,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
151
+ 2406,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
152
+ 64,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
153
+ 402,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
154
+ 344,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
155
+ 999,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
156
+ 271,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
157
+ 383,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
158
+ 403,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
159
+ 360,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
160
+ 2410,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
161
+ 34,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
162
+ The State Key Laboratory Breeding Base of Basic Science of Stomatology,non_host_source,AI reviewed approve_blank: Looks like person/institution/lab descriptor rather than biological host.
163
+ TS,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
164
+ WB,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
165
+ "SW4848was obtained from City Park Lake, Baton Rouge, Louisiana, U.S.A.",non_host_source,AI reviewed apply_only_if_host_empty: Non-host/source material; safe only when not overwriting a real Host_SD.
166
+ Central Muga Eri Research Training Institute,non_host_source,AI reviewed approve_blank: Looks like person/institution/lab descriptor rather than biological host.
167
+ Homemade pickle,non_host_source,AI reviewed apply_only_if_host_empty: Non-host/source material; safe only when not overwriting a real Host_SD.
168
+ Sichuan pickle,non_host_source,AI reviewed apply_only_if_host_empty: Non-host/source material; safe only when not overwriting a real Host_SD.
169
+ dairy products,non_host_source,AI reviewed apply_only_if_host_empty: Non-host/source material; safe only when not overwriting a real Host_SD.
170
+ brown sand,non_host_source,AI reviewed apply_only_if_host_empty: Non-host/source material; safe only when not overwriting a real Host_SD.
171
+ "School of Life Sciences, Arizona State University",non_host_source,AI reviewed approve_blank: Looks like person/institution/lab descriptor rather than biological host.
172
+ Mud of hot spring,non_host_source,AI reviewed apply_only_if_host_empty: Non-host/source material; safe only when not overwriting a real Host_SD.
173
+ University of Groningen,non_host_source,AI reviewed approve_blank: Looks like person/institution/lab descriptor rather than biological host.
174
+ Centre for Chemical Biology,non_host_source,AI reviewed approve_blank: Looks like person/institution/lab descriptor rather than biological host.
175
+ NO,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
176
+ Morbier Cheese,non_host_source,AI reviewed apply_only_if_host_empty: Non-host/source material; safe only when not overwriting a real Host_SD.
177
+ St Nectars Cheese,non_host_source,AI reviewed apply_only_if_host_empty: Non-host/source material; safe only when not overwriting a real Host_SD.
178
+ dd,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
179
+ National University of Trujillo,non_host_source,AI reviewed approve_blank: Looks like person/institution/lab descriptor rather than biological host.
180
+ N,not_identifiable,AI reviewed approve_blank: Safe to blank/mark non-host or missing.
181
+ GWG,not_identifiable,Cluster instruction says blank/not identifiable; no Host_SD rule created.
182
+ Host-associated,not_identifiable,Cluster instruction says blank/not identifiable; no Host_SD rule created.
183
+ Personnel,not_identifiable,Cluster instruction says blank/not identifiable; no Host_SD rule created.
184
+ Qing Ren,not_identifiable,Cluster instruction says blank/not identifiable; no Host_SD rule created.
185
+ USA,not_identifiable,Cluster instruction says blank/not identifiable; no Host_SD rule created.
186
+ BHK,not_identifiable,Cluster instruction says blank/not identifiable; no Host_SD rule created.
187
+ Wei Dai,not_identifiable,Cluster instruction says blank/not identifiable; no Host_SD rule created.
188
+ Bacillus,non_host_source,Cluster instruction says non-host/source/microbe/lab descriptor; no Host_SD rule created.
189
+ microbial,non_host_source,Cluster instruction says non-host/source/microbe/lab descriptor; no Host_SD rule created.
190
+ Rhodotorula mucilaginosa JGTA-S1,non_host_source,Cluster instruction says non-host/source/microbe/lab descriptor; no Host_SD rule created.
191
+ Bacillus thuringiensis subsp,non_host_source,Cluster instruction says non-host/source/microbe/lab descriptor; no Host_SD rule created.
192
+ Lactobacillus plantarum IMAU10120,non_host_source,Cluster instruction says non-host/source/microbe/lab descriptor; no Host_SD rule created.
193
+ Streptomyces yatensis CY-1,non_host_source,Cluster instruction says non-host/source/microbe/lab descriptor; no Host_SD rule created.
194
+ Vibrio alginolyticus LF TCBS 15,non_host_source,Cluster instruction says non-host/source/microbe/lab descriptor; no Host_SD rule created.
195
+ Vibrio parahaemolyticus IPNGS16,non_host_source,Cluster instruction says non-host/source/microbe/lab descriptor; no Host_SD rule created.
196
+ eye makeup preparations powder,non_host_source,Cluster instruction says non-host/source/microbe/lab descriptor; no Host_SD rule created.
197
+ Grown in Bordet-Gengou agar.,non_host_source,Cluster instruction says non-host/source/microbe/lab descriptor; no Host_SD rule created.
198
+ Grown in Bordetella parapertussis specific medium.,non_host_source,Cluster instruction says non-host/source/microbe/lab descriptor; no Host_SD rule created.
199
+ hospital_environmrnt,non_host_source,Cluster instruction says non-host/source/microbe/lab descriptor; no Host_SD rule created.
200
+ Isochrysis aff. galbana 'Tahitian isolate,non_host_source,Cluster instruction says non-host/source/microbe/lab descriptor; no Host_SD rule created.
201
+ Medium 987,non_host_source,Cluster instruction says non-host/source/microbe/lab descriptor; no Host_SD rule created.
202
+ Nasonia vitripennis LabII strain,non_host_source,Cluster instruction says non-host/source/microbe/lab descriptor; no Host_SD rule created.
203
+ Amaru Indians,not_identifiable,Cluster instruction says blank/not identifiable; no Host_SD rule created.
204
+ Pseudomonas,not_identifiable,"targeted host review 2026-04-30; bacterial self/source term, not eukaryotic host in bacterial metadata; blocked from host and secondary source routing 2026-04-30"
205
+ Synechococcus,not_identifiable,"targeted host review 2026-04-30; microbial term, not host; blocked from host and secondary source routing 2026-04-30"
206
+ Grown in Blood agar culture medium.,non_host_source,targeted host review 2026-04-30; culture medium descriptor; batch1 reviewed non-host culture/lab artifact; block from Host_SD
207
+ Prof. Gail Preston,not_identifiable,"targeted host review 2026-04-30; person name, not host"
208
+ Zhang Yuzhong,not_identifiable,"targeted host review 2026-04-30; person name, not host"
209
+ Yuping Zhang,not_identifiable,"targeted host review 2026-04-30; person name, not host"
210
+ Wen-Jun Li,not_identifiable,"targeted host review 2026-04-30; person name, not host"
211
+ Istituto di Microbiologia Universita' Cattolica del Sacro Cuore,not_identifiable,targeted host review 2026-04-30; institution/lab descriptor
212
+ Laboratorio de Estudios Ecogenomicos UAEM,not_identifiable,targeted host review 2026-04-30; institution/lab descriptor
213
+ Envirnment,non_host_source,targeted host review 2026-04-30; misspelled environment/source term
214
+ communal hospital surface,non_host_source,targeted host review 2026-04-30; healthcare surface/source term; batch1 reviewed source/environment descriptor; block from Host_SD
215
+ hospital communal surface,non_host_source,targeted host review 2026-04-30; healthcare surface/source term; batch1 reviewed source/environment descriptor; block from Host_SD
216
+ Leptospirosis,not_identifiable,"targeted host review 2026-04-30; disease term, not host; blocked from host and secondary source routing 2026-04-30"
217
+ Apheresis platelet concentrate-Preservative solution,non_host_source,targeted host review 2026-04-30; clinical product/source descriptor
218
+ TOPO10F',not_identifiable,targeted host review 2026-04-30; lab strain/vector descriptor; blocked from host and secondary source routing 2026-04-30; batch1 reviewed vector/construct label; block from Host_SD and source routing
219
+ XLOLR,not_identifiable,targeted host review 2026-04-30; lab strain/vector descriptor; blocked from host and secondary source routing 2026-04-30; batch1 reviewed vector/construct label; block from Host_SD and source routing
220
+ Pure culture of bacteria,non_host_source,batch1 reviewed non-host culture/lab artifact; block from Host_SD
221
+ bacteria pure culture,non_host_source,batch1 reviewed non-host culture/lab artifact; block from Host_SD
222
+ bacteria cell culture,non_host_source,batch1 reviewed non-host culture/lab artifact; block from Host_SD
223
+ Grown in chocolate agar culture medium,non_host_source,batch1 reviewed non-host culture/lab artifact; block from Host_SD
224
+ culture,non_host_source,batch1 reviewed non-host culture/lab artifact; block from Host_SD
225
+ Pure culture,non_host_source,batch1 reviewed non-host culture/lab artifact; block from Host_SD
226
+ Cell culture collection,non_host_source,batch1 reviewed non-host culture/lab artifact; block from Host_SD
227
+ bacterial extracellular vesicles,non_host_source,batch1 reviewed non-host culture/lab artifact; block from Host_SD
228
+ DH5a,non_host_source,batch1 reviewed lab strain/cell-line artifact; block from Host_SD
229
+ MC1061/P3,non_host_source,batch1 reviewed lab strain/cell-line artifact; block from Host_SD
230
+ XL1-MFR Blue,non_host_source,batch1 reviewed lab strain/cell-line artifact; block from Host_SD
231
+ XL10-gold,non_host_source,batch1 reviewed lab strain/cell-line artifact; block from Host_SD
232
+ ElectroTen Blue cells,non_host_source,batch1 reviewed lab strain/cell-line artifact; block from Host_SD
233
+ HeLa229 cell line,non_host_source,batch1 reviewed lab strain/cell-line artifact; block from Host_SD
234
+ MRC-5 infected cells,non_host_source,batch1 reviewed lab strain/cell-line artifact; block from Host_SD
235
+ cell lines,non_host_source,batch1 reviewed lab strain/cell-line artifact; block from Host_SD
236
+ mammalian cells,non_host_source,batch1 reviewed lab strain/cell-line artifact; block from Host_SD
237
+ synthetic construct,not_identifiable,batch1 reviewed vector/construct label; block from Host_SD and source routing
238
+ CDC,not_identifiable,batch1 reviewed person/institution/database label; block from Host_SD
239
+ BGSC database,not_identifiable,batch1 reviewed person/institution/database label; block from Host_SD
240
+ Microbiology Section,not_identifiable,batch1 reviewed person/institution/database label; block from Host_SD
241
+ Guangdong Microbial Culture Collection Center (GDMCC),not_identifiable,batch1 reviewed person/institution/database label; block from Host_SD
242
+ Laboratorio de Biologia Molecular Aplicada,not_identifiable,batch1 reviewed person/institution/database label; block from Host_SD
243
+ INMI RAS,not_identifiable,batch1 reviewed person/institution/database label; block from Host_SD
244
+ GEUS Denmark,not_identifiable,batch1 reviewed person/institution/database label; block from Host_SD
245
+ Shungui Zhou,not_identifiable,batch1 reviewed person/institution/database label; block from Host_SD
246
+ Valeria Souza,not_identifiable,batch1 reviewed person/institution/database label; block from Host_SD
247
+ Xiao-Hua Zhang,not_identifiable,batch1 reviewed person/institution/database label; block from Host_SD
248
+ Xinqing Zhao,not_identifiable,batch1 reviewed person/institution/database label; block from Host_SD
249
+ Professor Qiao,not_identifiable,batch1 reviewed person/institution/database label; block from Host_SD
250
+ Ye Lin Seo,not_identifiable,batch1 reviewed person/institution/database label; block from Host_SD
251
+ TAWAF ALI SHAH,not_identifiable,batch1 reviewed person/institution/database label; block from Host_SD
252
+ Qiu dongru,not_identifiable,batch1 reviewed person/institution/database label; block from Host_SD
253
+ Yun Tian,not_identifiable,batch1 reviewed person/institution/database label; block from Host_SD
254
+ Dust,non_host_source,batch1 reviewed source/environment descriptor; block from Host_SD
255
+ wetland,non_host_source,batch1 reviewed source/environment descriptor; block from Host_SD
256
+ surface within hospital,non_host_source,batch1 reviewed source/environment descriptor; block from Host_SD
257
+ hosptial surface,non_host_source,batch1 reviewed source/environment descriptor; block from Host_SD
258
+ environmental surface,non_host_source,batch1 reviewed source/environment descriptor; block from Host_SD
259
+ surface of hospital environment,non_host_source,batch1 reviewed source/environment descriptor; block from Host_SD
260
+ venous catheters,non_host_source,batch1 reviewed source/environment descriptor; block from Host_SD
261
+ Pathogen.env,non_host_source,batch1 reviewed source/environment descriptor; block from Host_SD
262
+ Environnment,non_host_source,batch1 reviewed source/environment descriptor; block from Host_SD
263
+ envirnomental,non_host_source,batch1 reviewed source/environment descriptor; block from Host_SD
264
+ patient environment,non_host_source,batch1 reviewed source/environment descriptor; block from Host_SD
265
+ no hosts,missing,batch1 reviewed missing/not-provided host token
266
+ no applicable,missing,batch1 reviewed missing/not-provided host token
267
+ not aplicable,missing,batch1 reviewed missing/not-provided host token
268
+ Nil,missing,batch1 reviewed missing/not-provided host token
269
+ untold,missing,batch1 reviewed missing/not-provided host token
270
+ missed,missing,batch1 reviewed missing/not-provided host token
271
+ mssing,missing,batch1 reviewed missing/not-provided host token
272
+ Not reported,missing,batch1 reviewed missing/not-provided host token
273
+ host,missing,batch1 reviewed missing/not-provided host token
274
+ Please add your host name HERE,missing,batch1 reviewed missing/not-provided host token
275
+ Others - Please add your host name HERE,missing,batch1 reviewed missing/not-provided host token
276
+ FCS,missing,targeted refinement batch 9-12 2026-05-01; missing/not identifiable cleanup
277
+ LWG,missing,targeted refinement batch 9-12 2026-05-01; missing/not identifiable cleanup
278
+ Mixed,missing,targeted refinement batch 9-12 2026-05-01; missing/not identifiable cleanup
279
+ PCU,missing,targeted refinement batch 9-12 2026-05-01; missing/not identifiable cleanup
280
+ QI0055,missing,targeted refinement batch 9-12 2026-05-01; missing/not identifiable cleanup
281
+ STOCK,missing,targeted refinement batch 9-12 2026-05-01; missing/not identifiable cleanup
282
+ cell,missing,targeted refinement batch 9-12 2026-05-01; missing/not identifiable cleanup
283
+ germ,missing,targeted refinement batch 9-12 2026-05-01; missing/not identifiable cleanup
284
+ type-material,missing,targeted refinement batch 9-12 2026-05-01; missing/not identifiable cleanup
285
+ vial,missing,targeted refinement batch 9-12 2026-05-01; missing/not identifiable cleanup
286
+ Beer,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
287
+ Chinese sauerkraut,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
288
+ Cryoconite,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
289
+ Ducks feed,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
290
+ Fodder,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
291
+ Jeotgal,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
292
+ Kefir grain,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
293
+ Lijuanjuan,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
294
+ Meat unspecified,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
295
+ Meju,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
296
+ Myeongtae-baechu-kimchi,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
297
+ Pasta dish,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
298
+ Pickled Vegetables,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
299
+ Pixian Douban,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
300
+ Prof. Chenghang Sun,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
301
+ Purified from MRC-5 infected cells by sonication and differential centrifugation.,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
302
+ Sausage,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
303
+ Tibetan kefir grain,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
304
+ Traditional dry sausage,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
305
+ activesludge,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
306
+ douchi,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
307
+ frozen green asparagus,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
308
+ garlic ferments,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
309
+ geothermal,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
310
+ hake filet,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
311
+ hypolith,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
312
+ jamiecosley,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
313
+ kefir grains,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
314
+ koumiss,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
315
+ marine sedment,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
316
+ micro-polyethylene,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
317
+ ocean sediments,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
318
+ pickles,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
319
+ pit mud,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
320
+ probiotic,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
321
+ pâté,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
322
+ red meat,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
323
+ salad,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
324
+ seuejot,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
325
+ seujeot,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
326
+ sichuan bacon,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
327
+ spice,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
328
+ the bottom layer of biofilter,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
329
+ the middle layer of biofilter,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
330
+ the top layer of biofilter,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
331
+ uranium mine tailings,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
332
+ veal,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
333
+ vegetables/fruits,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
334
+ wall paintings,non_host_source,targeted refinement batch 9-12 2026-05-01; source/lab/food artifact cleanup
335
+ Nostoc flagelliforme colonies,non_host_source,Batch 2 host curation 2026-05-05: Exact TaxonKit match is Bacteria; bacterial/archaeal/viral taxa are blocked from Host_SD in this curation policy.
336
+ Chelatococcus,non_host_source,Batch 2 host curation 2026-05-05: Exact TaxonKit match is Bacteria; bacterial/archaeal/viral taxa are blocked from Host_SD in this curation policy.
337
+ Cronobacter malonaticus LMG 23826,non_host_source,Batch 2 host curation 2026-05-05: Exact TaxonKit match is Bacteria; bacterial/archaeal/viral taxa are blocked from Host_SD in this curation policy.
338
+ Haemophilus ducreyi,non_host_source,Batch 2 host curation 2026-05-05: Exact TaxonKit match is Bacteria; bacterial/archaeal/viral taxa are blocked from Host_SD in this curation policy.
339
+ Bacteriophage,non_host_source,Batch 2 host curation 2026-05-05: Exact TaxonKit match is Viruses; bacterial/archaeal/viral taxa are blocked from Host_SD in this curation policy.
340
+ Exiguobacterium,non_host_source,Batch 2 host curation 2026-05-05: Exact TaxonKit match is Bacteria; bacterial/archaeal/viral taxa are blocked from Host_SD in this curation policy.
341
+ Canicola,non_host_source,Batch 2 host curation 2026-05-05: Exact TaxonKit match is Bacteria; bacterial/archaeal/viral taxa are blocked from Host_SD in this curation policy.
342
+ Trichodesmium,non_host_source,Batch 2 host curation 2026-05-05: Exact TaxonKit match is Bacteria; bacterial/archaeal/viral taxa are blocked from Host_SD in this curation policy.
343
+ Acetobacteraceae,non_host_source,Batch 2 host curation 2026-05-05: Exact TaxonKit match is Bacteria; bacterial/archaeal/viral taxa are blocked from Host_SD in this curation policy.
344
+ sea whip gorgonian,non_host_source,Batch 2 host curation 2026-05-05: reviewed source-like descriptor; keep out of Host_SD unless explicit host context is curated
345
+ Methanosarcina mazei strain VKM B-2370,non_host_source,Batch 2 host curation 2026-05-05: Exact TaxonKit match is Archaea; bacterial/archaeal/viral taxa are blocked from Host_SD in this curation policy.
346
+ Streptomyces,non_host_source,Batch 2 host curation 2026-05-05: Exact TaxonKit match is Bacteria; bacterial/archaeal/viral taxa are blocked from Host_SD in this curation policy.
347
+ "human, animal or environmental",non_host_source,Batch 3 2026-05-05: reviewed mixed/source descriptor; not a reliable Host_SD value
348
+ Chicken environment,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
349
+ pig farm environment,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
350
+ environmental bovine,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
351
+ flock environment broiler (Gallus gallus),non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
352
+ Environment of broiler farm,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
353
+ Bacteria isolated in solid culture medium,non_host_source,"Batch 3 2026-05-05: bacterial culture/lab artifact, not host organism"
354
+ Sus scrofa domesticus: environment,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
355
+ Environment of broiler farms,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
356
+ environmental swabs sponge,non_host_source,Batch 3 2026-05-05: reviewed mixed/source descriptor; not a reliable Host_SD value
357
+ water for animals,non_host_source,Batch 3 2026-05-05: reviewed mixed/source descriptor; not a reliable Host_SD value
358
+ environment of equine clinic,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
359
+ "Environment, animals",non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
360
+ Dog Environment,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
361
+ environmental avian,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
362
+ biofilm; non-axenic culture containing Capilliphycus salinus and associated bacteria,non_host_source,"Batch 3 2026-05-05: bacterial culture/lab artifact, not host organism"
363
+ turkey environmental,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
364
+ Fish and aquatic environment of Lake Victoria,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
365
+ Pig Special Project (Sampling of Livestock and Poultry Environment),non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
366
+ equine hospital environmental,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
367
+ pigeon farm environment,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
368
+ environmental turtle tank,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
369
+ environmental-chicken,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
370
+ equine environment,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
371
+ environmental feline,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
372
+ "Environment, poultry farm",non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
373
+ environment corn silage,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
374
+ "Environment, poultry barn",non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
375
+ Avian Environment,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
376
+ pure culture bacteria,non_host_source,"Batch 3 2026-05-05: bacterial culture/lab artifact, not host organism"
377
+ pure bacteria culture,non_host_source,"Batch 3 2026-05-05: bacterial culture/lab artifact, not host organism"
378
+ bacteria cells (from culture that grew from a isolated colony),non_host_source,"Batch 3 2026-05-05: bacterial culture/lab artifact, not host organism"
379
+ Pure culture of Gram (+) bacteria,non_host_source,"Batch 3 2026-05-05: bacterial culture/lab artifact, not host organism"
380
+ a piece of sunken bamboo in the marine environment,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
381
+ Environmental-turtle tank water,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
382
+ Poultry-Environmental,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
383
+ Chicken slaughterhouse environment,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
384
+ broiler environment - boot sock,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
385
+ Environmental surface sponge,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
386
+ Duck Pemise. Environmental drag booties from the duck barn floor,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
387
+ environmental clean incubator pheasant barn,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
388
+ environmental-quail,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
389
+ Environment feeding stuffs plant,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
390
+ bovine environmental plant leaves,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
391
+ avian environmental incubator,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
392
+ "Animal Feed, Environment, Feed Mill",non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
393
+ environmental porcine,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
394
+ Lab bacteria culture,non_host_source,"Batch 3 2026-05-05: bacterial culture/lab artifact, not host organism"
395
+ Environment sponge from processin plant,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
396
+ Processing environment sponge from retailer,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
397
+ environment contaminated by Homo sapiens patients,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
398
+ non mosquito Diptera environment,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
399
+ Mushroom environment,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
400
+ Dairy plant (environmental),non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
401
+ environmental sponges,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
402
+ Plant-associated environment,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
403
+ environment of live poultry market,non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
404
+ animal-associated environment [ENVO:01001002],non_host_source,Batch 3 2026-05-05: environment/context phrase without explicit specimen material
405
+ Jiuqu,non_host_source,Long-tail host curation 2026-05-05: fermentation starter/food-processing source descriptor, not Host_SD.
406
+ Hainan,non_host_source,Long-tail host curation 2026-05-05: geography/location token found in Host field; keep out of Host_SD.
407
+ Sichuan,non_host_source,Long-tail host curation 2026-05-05: geography/location token found in Host field; keep out of Host_SD.
408
+ Shanxi,non_host_source,Long-tail host curation 2026-05-05: geography/location token found in Host field; keep out of Host_SD.
409
+ "Bootsock, Great Harewood",non_host_source,Long-tail host curation 2026-05-05: boot sock/sample-location descriptor, not Host_SD.