feature-pruning 0.1.0__py3-none-any.whl

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@@ -0,0 +1,39 @@
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+ """
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+ Feature Pruning: High-Performance Feature Reduction for Credit Risk Scorecards
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+ =============================================================================
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+
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+ `feature_pruning` is an enterprise-grade, distributed feature reduction library
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+ specifically optimized for developing regulatory-compliant credit risk scorecards
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+ (such as Basel II/III, IFRS 9, and retail scorecard models).
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+
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+ Key Capabilities:
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+ -----------------
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+ - Automated variable classification (numeric, categorical, datetime, high-cardinality).
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+ - Memory-efficient precision downcasting for massive distributed datasets.
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+ - Fast distributed Information Value (IV) calculation via quantile binning.
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+ - IV-prioritized Pearson correlation matrix pruning to eliminate multicollinearity.
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+ - Transparent audit trail tracking all feature inclusion and exclusion decisions.
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+
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+ Quick Example:
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+ --------------
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+ >>> from feature_pruning import FeatureSelectionPipeline
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+ >>> pipeline = FeatureSelectionPipeline(
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+ ... df=spark_df,
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+ ... target_col="default_flag",
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+ ... mandatory_features=["bureau_score", "annual_income"],
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+ ... exclude_features=["applicant_id"],
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+ ... iv_threshold=0.03,
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+ ... corr_threshold=0.95,
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+ ... )
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+ >>> pruned_spark_df, audit_report = pipeline.run()
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+ """
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+
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+ from .core import FeatureSelectionPipeline
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+
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+ __version__ = "0.1.0"
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+ __author__ = "Vrukshya"
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+ __all__ = [
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+ "FeatureSelectionPipeline",
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+ "__version__",
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+ "__author__",
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+ ]
@@ -0,0 +1,486 @@
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+ import time
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+ import warnings
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+ from typing import List, Tuple, Dict, Any, Optional
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+ from collections import defaultdict
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+
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+ import numpy as np
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+ import pandas as pd
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+ import pyspark.sql.functions as F
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+ from pyspark.sql import SparkSession, DataFrame as SparkDataFrame
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+ from pyspark.sql.types import (
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+ IntegerType, LongType, FloatType, DoubleType, DecimalType,
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+ ByteType, ShortType, StringType, StructType, StructField,
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+ )
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+ from pyspark.storagelevel import StorageLevel
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+ from pyspark.ml.stat import Correlation
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+ from pyspark.ml.feature import VectorAssembler
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+
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+ warnings.filterwarnings("ignore")
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+
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+
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+ class FeatureSelectionPipeline:
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+ """End-to-end distributed feature reduction pipeline for credit risk scorecards.
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+
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+ This pipeline systematically filters high-dimensional feature spaces (e.g., thousands
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+ of bureau, demographic, and transactional attributes) down to a curated, highly predictive,
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+ and non-collinear feature set ready for Weight of Evidence (WoE) binning and Logistic
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+ Regression scorecard modeling.
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+
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+ Execution Stages:
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+ 1. **step_identify_features**: Classifies columns into numeric, categorical,
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+ datetime (auto-excluded), and high-cardinality (excluded if unique values > max_cat_levels).
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+ 2. **step_downcast**: Casts 64-bit numeric types (DecimalType, DoubleType) to FloatType
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+ to reduce Spark cluster memory footprint and accelerate matrix computations.
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+ 3. **step_compute_iv**: Calculates Information Value (IV) across all candidates using
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+ distributed quantile binning (`mapInPandas`). Features below `iv_threshold` are filtered out.
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+ 4. **step_prune_correlations**: Computes a Pearson correlation matrix via PySpark ML.
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+ When two features have correlation >= `corr_threshold`, the feature with lower IV
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+ is discarded to prevent multicollinearity.
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+ 5. **step_build_report**: Compiles a comprehensive audit DataFrame documenting the
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+ status and exact exclusion reason for every input column.
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+
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+ Parameters:
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+ df: Spark DataFrame containing candidate features and the binary target column.
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+ target_col: Name of the binary target column (e.g., 'default_flag', 'bad_loan').
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+ Must contain 0 (non-event / good) and 1 (event / bad).
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+ mandatory_features: Optional list of column names that must never be dropped
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+ regardless of IV or correlation (e.g., regulatory KPI ratios, bureau scores).
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+ exclude_features: Optional list of column names to explicitly exclude from selection
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+ (e.g., ID columns, leakage variables, date stamps).
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+ iv_threshold: Minimum Information Value required to retain a feature.
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+ Scorecard convention: < 0.02 (unpredictive), 0.02 - 0.1 (weak),
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+ 0.1 - 0.3 (medium), 0.3 - 0.5 (strong). Default is 0.03.
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+ iv_n_bins: Number of quantile bins used for computing IV on continuous variables.
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+ Default is 100.
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+ iv_sample_rows: Maximum sample size used for computing distributed IV. Default is 1,000,000.
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+ corr_threshold: Absolute Pearson correlation threshold above which collinear features
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+ are pruned. Default is 0.95.
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+ corr_sample_rows: Maximum sample size used for the correlation matrix calculation.
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+ Default is 500,000.
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+ max_corr_features: Maximum number of top IV features to feed into correlation pruning.
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+ Default is 5000.
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+ max_cat_levels: Maximum number of distinct categories permitted before a categorical
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+ feature is flagged as high-cardinality and excluded. Default is 200.
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+ expected_final_min: Minimum expected number of retained features. If correlation pruning
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+ drops too many features, the threshold dynamically relaxes. Default is 200.
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+ expected_final_max: Maximum cap on the final number of retained features. Default is 1000.
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+ downcast: Whether to cast 64-bit floats/decimals to 32-bit float for memory efficiency.
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+ Default is True.
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+ verbose: Whether to log pipeline progress and execution times. Default is True.
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+ """
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+
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+ def __init__(
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+ self,
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+ df: SparkDataFrame,
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+ target_col: str,
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+ mandatory_features: Optional[List[str]] = None,
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+ exclude_features: Optional[List[str]] = None,
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+ iv_threshold: float = 0.03,
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+ iv_n_bins: int = 100,
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+ iv_sample_rows: int = 1_000_000,
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+ corr_threshold: float = 0.95,
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+ corr_sample_rows: int = 500_000,
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+ max_corr_features: int = 5000,
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+ max_cat_levels: int = 200,
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+ expected_final_min: int = 200,
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+ expected_final_max: int = 1000,
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+ downcast: bool = True,
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+ verbose: bool = True,
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+ ):
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+ self._log = print if verbose else (lambda *a, **k: None)
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+ self.target_col = target_col.lower()
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+ self.mandatory_features = [f.lower() for f in (mandatory_features or [])]
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+ self.exclude_features = [f.lower() for f in (exclude_features or [])]
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+ self.iv_threshold = iv_threshold
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+ self.iv_n_bins = iv_n_bins
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+ self.iv_sample_rows = iv_sample_rows
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+ self.corr_threshold = corr_threshold
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+ self.corr_sample_rows = corr_sample_rows
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+ self.max_corr_features = max_corr_features
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+ self.max_cat_levels = max_cat_levels
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+ self.expected_final_min = expected_final_min
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+ self.expected_final_max = expected_final_max
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+ self.downcast_enabled = downcast
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+
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+ self.df_spark_ = df.toDF(*[c.lower() for c in df.columns])
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+ self._spark = df.sparkSession
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+
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+ self.feature_types_ = None
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+ self.iv_results_ = None
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+ self.correlation_drops_ = None
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+ self.final_features_ = None
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+ self.feature_report_ = None
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+ self.result_df_ = None
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+ self._n_rows = None
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+ self._direct_ok = None
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+ self._df_work = None
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+
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+ def step_identify_features(self):
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+ self._log("\n[Step 1/5] Identifying feature types...")
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+ dtypes_str = dict(self.df_spark_.dtypes)
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+ all_cols = [c for c in self.df_spark_.columns if c != self.target_col]
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+ exclude_set = set(self.exclude_features)
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+ mandatory_set = set(self.mandatory_features)
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+ cat_type_names = {"string", "boolean"}
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+ dt_type_names = {"date", "timestamp"}
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+
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+ numeric_cols, cat_candidates, datetime_cols = [], [], []
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+ for c in all_cols:
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+ if c in exclude_set:
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+ continue
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+ if dtypes_str[c] in dt_type_names:
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+ datetime_cols.append(c)
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+ elif dtypes_str[c] in cat_type_names:
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+ cat_candidates.append(c)
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+ else:
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+ numeric_cols.append(c)
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+
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+ high_cardinality, keep_cat = [], []
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+ if cat_candidates:
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+ counts = self.df_spark_.agg(
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+ *[F.approx_count_distinct(c).alias(c) for c in cat_candidates]
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+ ).first().asDict()
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+ for c in cat_candidates:
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+ if counts.get(c, 0) <= self.max_cat_levels or c in mandatory_set:
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+ keep_cat.append(c)
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+ else:
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+ high_cardinality.append(c)
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+
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+ self.feature_types_ = {
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+ "numeric": numeric_cols,
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+ "categorical": keep_cat,
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+ "datetime": datetime_cols,
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+ "high_cardinality": high_cardinality,
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+ }
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+ self._log(
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+ f" Numeric: {len(numeric_cols)} | Categorical: {len(keep_cat)} | "
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+ f"Datetime(excl): {len(datetime_cols)} | High-card(excl): {len(high_cardinality)}"
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+ )
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+ return self
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+
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+ def step_downcast(self):
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+ if not self.downcast_enabled:
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+ self._log("\n[Step 2/5] Skipping downcast.")
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+ return self
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+ self._log("\n[Step 2/5] Downcasting to 32-bit...")
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+ protected = set([self.target_col] + self.mandatory_features)
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+ cast_map = []
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+ for field in self.df_spark_.schema.fields:
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+ name, dtype = field.name, field.dataType
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+ if name in protected:
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+ cast_map.append(
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+ F.col(name).cast(DoubleType()).alias(name)
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+ if isinstance(dtype, DecimalType)
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+ else F.col(name)
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+ )
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+ elif isinstance(dtype, (DecimalType, DoubleType)):
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+ cast_map.append(F.col(name).cast(FloatType()).alias(name))
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+ else:
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+ cast_map.append(F.col(name))
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+ self.df_spark_ = self.df_spark_.select(*cast_map)
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+ return self
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+
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+ def step_compute_iv(self):
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+ if self.feature_types_ is None:
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+ raise RuntimeError("Run step_identify_features() first.")
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+ self._log(f"\n[Step 3/5] Computing Information Value ({self.iv_n_bins}-bin)...")
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+ t0 = time.time()
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+
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+ numeric_cols = self.feature_types_["numeric"]
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+ categorical_cols = self.feature_types_["categorical"]
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+ select_cols = numeric_cols + categorical_cols + [self.target_col]
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+ df_work = self.df_spark_.select(*select_cols).persist(StorageLevel.MEMORY_AND_DISK)
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+ self._n_rows = df_work.count()
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+ n_feat = len(numeric_cols) + len(categorical_cols)
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+ self._log(f" Rows: {self._n_rows:,} | Features: {n_feat}")
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+
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+ self._direct_ok = (self._n_rows <= 500_000 and n_feat <= 200)
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+ if self._direct_ok:
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+ self._log(f" Small data - skipping IV, keeping ALL {n_feat} features.")
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+ self.iv_results_ = pd.DataFrame({"feature": numeric_cols + categorical_cols, "iv": [None] * n_feat})
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+ self._df_work = df_work
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+ return self
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+
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+ iv_sdf = df_work.limit(self.iv_sample_rows) if self._n_rows > self.iv_sample_rows else df_work
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+ iv_sdf = iv_sdf.filter(iv_sdf[self.target_col].isNotNull())
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+ target_col = self.target_col
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+ n_bins = self.iv_n_bins
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+
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+ totals = iv_sdf.agg(
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+ F.count("*").alias("n"),
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+ F.sum(F.col(target_col).cast("int")).alias("ev")
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+ ).collect()[0]
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+ n_total, total_ev = totals["n"], int(totals["ev"])
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+ total_non_ev = n_total - total_ev
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+ if total_ev == 0 or total_non_ev == 0:
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+ raise ValueError("Target has only one class.")
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+
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+ results = []
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+ q_probs = np.array([i / n_bins for i in range(1, n_bins)])
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+
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+ if numeric_cols:
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+ hist_schema = StructType([
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+ StructField("feature", StringType(), False),
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+ StructField("bin_id", IntegerType(), False),
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+ StructField("cnt", LongType(), False),
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+ StructField("events", LongType(), False),
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+ ])
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+ n_cols_sel = len(numeric_cols) + 1
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+ hist_parts = max(200, int(np.ceil(n_total * n_cols_sel * 4 / 25e6)))
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+
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+ sample_pdf = iv_sdf.select(*[F.col(c) for c in numeric_cols]).limit(50_000).toPandas()
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+ bounds_map = {}
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+ for c in numeric_cols:
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+ vals = pd.to_numeric(sample_pdf[c], errors="coerce").dropna().to_numpy(dtype=np.float64)
235
+ if len(vals) < 10:
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+ continue
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+ bds = np.unique(np.quantile(vals, q_probs))
238
+ if len(bds) >= 1:
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+ bounds_map[c] = bds
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+ del sample_pdf
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+
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+ if bounds_map:
243
+ bounds_all = tuple(bounds_map.items())
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+ empty_pdf = pd.DataFrame({
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+ "feature": pd.Series(dtype="str"),
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+ "bin_id": pd.Series(dtype="int32"),
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+ "cnt": pd.Series(dtype="int64"),
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+ "events": pd.Series(dtype="int64")
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+ })
250
+
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+ def _hist(pdf_iter, _b=bounds_all, _tc=target_col):
252
+ for pdf in pdf_iter:
253
+ tgt = pd.to_numeric(pdf[_tc], errors="coerce").fillna(0).astype(np.int64).to_numpy()
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+ rows = []
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+ for feat, bounds in _b:
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+ if feat not in pdf.columns:
257
+ continue
258
+ vals = pd.to_numeric(pdf[feat], errors="coerce").to_numpy(dtype=np.float64, copy=False)
259
+ bins = np.searchsorted(bounds, np.nan_to_num(vals, nan=-np.inf), side="right").astype(np.int32)
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+ cnt = np.bincount(bins, minlength=len(bounds) + 1)
261
+ ev = np.bincount(bins, weights=tgt, minlength=len(bounds) + 1)
262
+ for b in np.nonzero(cnt)[0].tolist():
263
+ rows.append((feat, int(b), int(cnt[b]), int(ev[b])))
264
+ yield pd.DataFrame(rows, columns=["feature", "bin_id", "cnt", "events"]) if rows else empty_pdf
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+
266
+ agg_rows = (
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+ iv_sdf.repartition(hist_parts)
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+ .select([F.col(target_col).cast("int").alias(target_col)] + [F.col(c) for c in bounds_map])
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+ .mapInPandas(_hist, schema=hist_schema)
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+ .groupBy("feature", "bin_id")
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+ .agg(F.sum("cnt").alias("cnt"), F.sum("events").alias("events"))
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+ .collect()
273
+ )
274
+
275
+ feat_bins = defaultdict(list)
276
+ for row in agg_rows:
277
+ feat_bins[row["feature"]].append(row)
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+ for feat, bins in feat_bins.items():
279
+ if len(bins) < 2:
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+ continue
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+ iv = 0.0
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+ for row in bins:
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+ ev_i, non_ev_i = int(row["events"]), int(row["cnt"]) - int(row["events"])
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+ pct_ev = max(ev_i, 0.5) / total_ev
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+ pct_non = max(non_ev_i, 0.5) / total_non_ev
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+ iv += (pct_non - pct_ev) * np.log(pct_non / pct_ev)
287
+ results.append({"feature": feat, "iv": iv})
288
+
289
+ for feat in categorical_cols:
290
+ rows = iv_sdf.filter(F.col(feat).isNotNull()).groupBy(feat).agg(
291
+ F.count("*").alias("cnt"),
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+ F.sum(F.col(target_col).cast("int")).alias("events")
293
+ ).collect()
294
+ if len(rows) < 2:
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+ continue
296
+ iv = 0.0
297
+ for row in rows:
298
+ ev_i, non_ev_i = int(row["events"]), int(row["cnt"]) - int(row["events"])
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+ pct_ev = max(ev_i, 0.5) / total_ev
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+ pct_non = max(non_ev_i, 0.5) / total_non_ev
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+ iv += (pct_non - pct_ev) * np.log(pct_non / pct_ev)
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+ results.append({"feature": feat, "iv": iv})
303
+
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+ self.iv_results_ = pd.DataFrame(results).sort_values("iv", ascending=False).reset_index(drop=True) if results else pd.DataFrame(columns=["feature", "iv"])
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+ self._df_work = df_work
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+ n_pass = len(self.iv_results_[self.iv_results_["iv"] >= self.iv_threshold]) if len(self.iv_results_) > 0 else 0
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+ self._log(f" IV done in {time.time() - t0:.1f}s | Features with IV >= {self.iv_threshold}: {n_pass}")
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+ return self
309
+
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+ def step_prune_correlations(self):
311
+ if self.iv_results_ is None:
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+ self._log("\n[Step 4/5] Skipping correlation pruning - no IV results. Run step_compute_iv() first.")
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+ self.correlation_drops_ = []
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+ self.final_features_ = sorted(set(self.mandatory_features) - {""})
315
+ return self
316
+ self._log(f"\n[Step 4/5] Correlation pruning (threshold={self.corr_threshold})...")
317
+ t0 = time.time()
318
+
319
+ if self._direct_ok:
320
+ self._log(" Skipped (small data).")
321
+ all_feats = self.feature_types_["numeric"] + self.feature_types_["categorical"]
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+ self.correlation_drops_ = []
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+ self.final_features_ = sorted(set(all_feats + self.mandatory_features) - {""})
324
+ return self
325
+
326
+ numeric_set = set(self.feature_types_["numeric"])
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+ iv_df = self.iv_results_
328
+ iv_passing = iv_df[iv_df["iv"] >= self.iv_threshold]["feature"].tolist()
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+ top_numeric = [f for f in iv_passing if f in numeric_set and f not in self.mandatory_features]
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+ top_categoric = [f for f in iv_passing if f not in numeric_set and f not in self.mandatory_features]
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+
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+ iv_order = iv_df.set_index("feature")
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+ ordered_numeric = iv_order.loc[[f for f in top_numeric if f in iv_order.index]].sort_values("iv", ascending=False).index.tolist()
334
+ if self.max_corr_features and len(ordered_numeric) > self.max_corr_features:
335
+ ordered_numeric = ordered_numeric[:self.max_corr_features]
336
+
337
+ kept_numeric, dropped_info = [], []
338
+ if ordered_numeric:
339
+ corr_sdf = (self._df_work.limit(self.corr_sample_rows) if self._n_rows > self.corr_sample_rows else self._df_work)
340
+ sdf = corr_sdf.select(*ordered_numeric).fillna(0)
341
+ vec = VectorAssembler(inputCols=ordered_numeric, outputCol="features", handleInvalid="keep").transform(sdf).select("features")
342
+ corr_mat = Correlation.corr(vec, "features", "pearson").head()[0]
343
+
344
+ kept_idx = []
345
+ for i, f in enumerate(ordered_numeric):
346
+ drop = None
347
+ for j in kept_idx:
348
+ if abs(corr_mat[i, j]) >= self.corr_threshold:
349
+ drop = (ordered_numeric[j], abs(corr_mat[i, j]))
350
+ break
351
+ if drop:
352
+ dropped_info.append({"feature": f, "correlated_with": drop[0], "correlation_value": round(float(drop[1]), 4)})
353
+ else:
354
+ kept_numeric.append(f)
355
+ kept_idx.append(i)
356
+
357
+ if len(kept_numeric) < self.expected_final_min and self.corr_threshold < 0.98:
358
+ th2 = min(0.99, self.corr_threshold + 0.02)
359
+ self._log(f" Retrying with threshold={th2:.2f}")
360
+ kept_numeric, dropped_info, kept_idx = [], [], []
361
+ for i, f in enumerate(ordered_numeric):
362
+ drop = None
363
+ for j in kept_idx:
364
+ if abs(corr_mat[i, j]) >= th2:
365
+ drop = (ordered_numeric[j], abs(corr_mat[i, j]))
366
+ break
367
+ if drop:
368
+ dropped_info.append({"feature": f, "correlated_with": drop[0], "correlation_value": round(float(drop[1]), 4)})
369
+ else:
370
+ kept_numeric.append(f)
371
+ kept_idx.append(i)
372
+
373
+ if len(kept_numeric) > self.expected_final_max:
374
+ kept_numeric = kept_numeric[:self.expected_final_max]
375
+
376
+ self.correlation_drops_ = dropped_info
377
+ final_set = set(kept_numeric + top_categoric + self.mandatory_features)
378
+ final_set.discard("")
379
+ self.final_features_ = sorted(final_set)
380
+ self._log(f" Done in {time.time() - t0:.1f}s | Kept: {len(kept_numeric)} numeric + {len(top_categoric)} cat | Dropped: {len(dropped_info)}")
381
+ self._log(f" Final features: {len(self.final_features_)}")
382
+ return self
383
+
384
+ def step_build_report(self):
385
+ if self.final_features_ is None:
386
+ raise RuntimeError("Run step_prune_correlations() first.")
387
+ self._log("\n[Step 5/5] Building report & selecting columns...")
388
+
389
+ numeric_set = set(self.feature_types_["numeric"])
390
+ iv_lookup = dict(zip(self.iv_results_["feature"], self.iv_results_["iv"])) if len(self.iv_results_) > 0 else {}
391
+ corr_lookup = {d["feature"]: d for d in (self.correlation_drops_ or [])}
392
+ final_set = set(self.final_features_)
393
+ rows = []
394
+
395
+ for c in self.feature_types_["datetime"]:
396
+ rows.append({
397
+ "feature": c,
398
+ "dtype": "datetime",
399
+ "iv": None,
400
+ "correlated_with": None,
401
+ "correlation_value": None,
402
+ "is_selected": False,
403
+ "exclusion_reason": "datetime_column"
404
+ })
405
+ for c in self.feature_types_["high_cardinality"]:
406
+ rows.append({
407
+ "feature": c,
408
+ "dtype": "categorical",
409
+ "iv": None,
410
+ "correlated_with": None,
411
+ "correlation_value": None,
412
+ "is_selected": False,
413
+ "exclusion_reason": f"high_cardinality (>{self.max_cat_levels})"
414
+ })
415
+ for c in self.exclude_features:
416
+ if c not in [r["feature"] for r in rows]:
417
+ rows.append({
418
+ "feature": c,
419
+ "dtype": "excluded",
420
+ "iv": None,
421
+ "correlated_with": None,
422
+ "correlation_value": None,
423
+ "is_selected": False,
424
+ "exclusion_reason": "user_excluded"
425
+ })
426
+
427
+ for c in self.feature_types_["numeric"] + self.feature_types_["categorical"]:
428
+ dtype_str = "numeric" if c in numeric_set else "categorical"
429
+ iv_val = iv_lookup.get(c)
430
+ corr_with, corr_val, is_sel = None, None, c in final_set
431
+ if c in self.mandatory_features:
432
+ reason = ""
433
+ is_sel = True
434
+ elif c in corr_lookup:
435
+ reason = f"correlated (r={corr_lookup[c]['correlation_value']:.3f})"
436
+ corr_with, corr_val = corr_lookup[c]["correlated_with"], corr_lookup[c]["correlation_value"]
437
+ elif iv_val is not None and iv_val < self.iv_threshold:
438
+ reason = f"low_iv ({iv_val:.4f})"
439
+ elif not is_sel:
440
+ reason = "not_selected"
441
+ else:
442
+ reason = ""
443
+ rows.append({
444
+ "feature": c,
445
+ "dtype": dtype_str,
446
+ "iv": round(float(iv_val), 6) if iv_val is not None else None,
447
+ "correlated_with": corr_with,
448
+ "correlation_value": corr_val,
449
+ "is_selected": is_sel,
450
+ "exclusion_reason": reason
451
+ })
452
+
453
+ self.feature_report_ = pd.DataFrame(rows).sort_values(
454
+ ["is_selected", "iv"], ascending=[False, False]
455
+ ).reset_index(drop=True)
456
+
457
+ existing = set(self._df_work.columns)
458
+ final_select = [c for c in self.final_features_ if c in existing] + [self.target_col]
459
+ self.result_df_ = self._df_work.select(*final_select)
460
+ try:
461
+ self._df_work.unpersist()
462
+ except Exception:
463
+ pass
464
+ return self
465
+
466
+ def run(self) -> Tuple[SparkDataFrame, pd.DataFrame]:
467
+ t0 = time.time()
468
+ self._log(f"\n{'='*60}\nFEATURE SELECTION PIPELINE\n{'='*60}")
469
+ self.step_identify_features()
470
+ self.step_downcast()
471
+ self.step_compute_iv()
472
+ self.step_prune_correlations()
473
+ self.step_build_report()
474
+ self._log(f"\n{'='*60}\nDONE in {time.time() - t0:.1f}s | {len(self.final_features_)} features\n{'='*60}\n")
475
+ return self.result_df_, self.feature_report_
476
+
477
+ def get_selected_columns(self) -> List[str]:
478
+ return self.feature_report_[self.feature_report_["is_selected"]]["feature"].tolist()
479
+
480
+ def get_iv_summary(self) -> pd.DataFrame:
481
+ return self.iv_results_[self.iv_results_["iv"].notna()].sort_values("iv", ascending=False).reset_index(drop=True)
482
+
483
+ def get_correlation_drops(self) -> pd.DataFrame:
484
+ if not self.correlation_drops_:
485
+ return pd.DataFrame(columns=["feature", "correlated_with", "correlation_value"])
486
+ return pd.DataFrame(self.correlation_drops_).sort_values("correlation_value", ascending=False).reset_index(drop=True)
@@ -0,0 +1,330 @@
1
+ Metadata-Version: 2.4
2
+ Name: feature_pruning
3
+ Version: 0.1.0
4
+ Summary: High-performance PySpark library for scalable feature reduction and Information Value (IV) pruning in Credit Risk Scorecards
5
+ Author-email: Vrukshya <vrukshyaai@gmail.com>
6
+ Maintainer-email: Vrukshya <vrukshyaai@gmail.com>
7
+ License: MIT License
8
+
9
+ Copyright (c) 2026 Vrukshya Org
10
+
11
+ Permission is hereby granted, free of charge, to any person obtaining a copy
12
+ of this software and associated documentation files (the "Software"), to deal
13
+ in the Software without restriction, including without limitation the rights
14
+ to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
15
+ copies of the Software, and to permit persons to whom the Software is
16
+ furnished to do so, subject to the following conditions:
17
+
18
+ The above copyright notice and this permission notice shall be included in all
19
+ copies or substantial portions of the Software.
20
+
21
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
22
+ IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
23
+ FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
24
+ AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
25
+ LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
26
+ OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
27
+ SOFTWARE.
28
+ Project-URL: Homepage, https://github.com/vrukshya/feature_pruning
29
+ Project-URL: Documentation, https://github.com/vrukshya/feature_pruning#readme
30
+ Project-URL: Repository, https://github.com/vrukshya/feature_pruning
31
+ Project-URL: Bug Tracker, https://github.com/vrukshya/feature_pruning/issues
32
+ Keywords: credit-risk,credit-scoring,scorecard,feature-reduction,feature-pruning,feature-selection,information-value,woe,pyspark,fintech,machine-learning
33
+ Classifier: Development Status :: 4 - Beta
34
+ Classifier: Intended Audience :: Financial and Insurance Industry
35
+ Classifier: Intended Audience :: Science/Research
36
+ Classifier: Intended Audience :: Developers
37
+ Classifier: License :: OSI Approved :: MIT License
38
+ Classifier: Operating System :: OS Independent
39
+ Classifier: Programming Language :: Python :: 3
40
+ Classifier: Programming Language :: Python :: 3.8
41
+ Classifier: Programming Language :: Python :: 3.9
42
+ Classifier: Programming Language :: Python :: 3.10
43
+ Classifier: Programming Language :: Python :: 3.11
44
+ Classifier: Programming Language :: Python :: 3.12
45
+ Classifier: Topic :: Office/Business :: Financial
46
+ Classifier: Topic :: Scientific/Engineering :: Artificial Intelligence
47
+ Classifier: Topic :: Software Development :: Libraries :: Python Modules
48
+ Requires-Python: >=3.8
49
+ Description-Content-Type: text/markdown
50
+ License-File: LICENSE.txt
51
+ Requires-Dist: numpy>=1.20.0
52
+ Requires-Dist: pandas>=1.3.0
53
+ Requires-Dist: pyspark>=3.1.0
54
+ Provides-Extra: dev
55
+ Requires-Dist: pytest>=7.0.0; extra == "dev"
56
+ Requires-Dist: pytest-cov>=4.0.0; extra == "dev"
57
+ Requires-Dist: black>=23.0.0; extra == "dev"
58
+ Requires-Dist: flake8>=6.0.0; extra == "dev"
59
+ Requires-Dist: mypy>=1.0.0; extra == "dev"
60
+ Dynamic: license-file
61
+
62
+ # feature_pruning
63
+
64
+ [![Python Version](https://img.shields.io/badge/python-3.8%20%7C%203.9%20%7C%203.10%20%7C%203.11%20%7C%203.12-blue.svg)](https://pypi.org/project/feature-pruning/)
65
+ [![PySpark](https://img.shields.io/badge/PySpark-%3E%3D3.1.0-orange.svg)](https://spark.apache.org/)
66
+ [![License: MIT](https://img.shields.io/badge/License-MIT-yellow.svg)](https://opensource.org/licenses/MIT)
67
+ [![Code style: black](https://img.shields.io/badge/code%20style-black-000000.svg)](https://github.com/psf/black)
68
+
69
+ **High-Performance Distributed Feature Reduction Engine for Credit Risk Scorecards.**
70
+
71
+ `feature_pruning` is an enterprise-grade Python library built natively on Apache Spark for selecting and pruning variables in credit risk scorecard development (Probability of Default / Basel II/III / IFRS 9 / Retail Scorecards).
72
+
73
+ It automates the transition from thousands of raw credit bureau, transaction, and demographic attributes down to an optimal, highly predictive, non-collinear feature set ready for Weight of Evidence (WoE) binning and Logistic Regression.
74
+
75
+ ---
76
+
77
+ ## The Credit Risk Scorecard Challenge
78
+
79
+ Building regulatory-compliant credit scorecards presents unique data engineering and modeling hurdles:
80
+
81
+ - **Audit & Governance (SR 11-7 / Basel / IFRS 9)**: Model risk management (MRM) and regulatory auditors require an explicit justification for every discarded or retained variable.
82
+ - **Extreme Multicollinearity**: Credit bureau tables often contain dozens of collinear metrics (e.g., `num_inquiries_3m`, `num_inquiries_6m`, `num_inquiries_12m`). In standard logistic regression scorecards, collinearity causes unstable coefficients and counter-intuitive sign reversals.
83
+ - **Predictive Quality**: Features must meet minimum **Information Value (IV)** standards while preserving mandatory business or regulatory key indicators.
84
+ - **Big Data Scale**: Modern credit datasets often span millions of accounts and thousands of features. Single-machine libraries (pandas/scikit-learn) crash with `OutOfMemory` errors when computing quantile cuts and pairwise correlations.
85
+
86
+ `feature_pruning` solves these challenges by running distributed quantile binning, IV evaluation, and correlation pruning entirely within **Apache Spark**.
87
+
88
+ ---
89
+
90
+ ## Pipeline Architecture
91
+
92
+ ```
93
+ Raw Spark DataFrame (Millions of Rows, 1000s of Features)
94
+
95
+
96
+ ┌────────────────────────────────────────────────────────────────────────────────────────────────────────┐
97
+ │ Stage 1: Feature Classification │
98
+ │ • Detects Numeric vs. Categorical vs. Datetime columns │
99
+ │ • Flags & filters high-cardinality strings (> max_cat_levels) │
100
+ │ • Protects mandatory features and excludes requested columns │
101
+ └──────────────────────────────────────────────────┬─────────────────────────────────────────────────────┘
102
+
103
+
104
+ ┌────────────────────────────────────────────────────────────────────────────────────────────────────────┐
105
+ │ Stage 2: Distributed Precision Downcasting │
106
+ │ • Downcasts DoubleType & DecimalType to 32-bit FloatType │
107
+ │ • Cuts executor memory consumption by ~50% during matrix aggregation │
108
+ └──────────────────────────────────────────────────┬─────────────────────────────────────────────────────┘
109
+
110
+
111
+ ┌────────────────────────────────────────────────────────────────────────────────────────────────────────┐
112
+ │ Stage 3: High-Throughput Information Value (IV) Computation │
113
+ │ • Computes continuous quantiles and distributed binning via Spark mapInPandas │
114
+ │ • Aggregates Goods/Bads and calculates IV for numeric and categorical variables │
115
+ │ • Filters out variables with IV < iv_threshold │
116
+ └──────────────────────────────────────────────────┬─────────────────────────────────────────────────────┘
117
+
118
+
119
+ ┌────────────────────────────────────────────────────────────────────────────────────────────────────────┐
120
+ │ Stage 4: IV-Prioritized Correlation Pruning │
121
+ │ • Computes Pearson correlation matrix via PySpark VectorAssembler + Correlation │
122
+ │ • Between collinear pairs (r >= corr_threshold), retains the feature with higher IV │
123
+ │ • Dynamic threshold relaxation ensures minimum required feature count is met │
124
+ └──────────────────────────────────────────────────┬─────────────────────────────────────────────────────┘
125
+
126
+
127
+ ┌────────────────────────────────────────────────────────────────────────────────────────────────────────┐
128
+ │ Stage 5: Full Audit Reporting & Data Delivery │
129
+ │ • Generates comprehensive audit DataFrame (is_selected, iv, correlated_with, exclusion_reason) │
130
+ │ • Outputs pruned Spark DataFrame ready for Weight of Evidence (WoE) binning │
131
+ └────────────────────────────────────────────────────────────────────────────────────────────────────────┘
132
+ ```
133
+
134
+ ---
135
+
136
+ ## Key Features
137
+
138
+ - ⚡ **Native PySpark Scalability**: Distributed quantile histograms and correlation matrices executed directly on cluster workers via Spark ML and `mapInPandas`.
139
+ - 📊 **IV-Driven Pruning**: When two features are collinear, the pipeline drops the weaker predictor and retains the variable with higher Information Value.
140
+ - 🛡️ **Mandatory Variable Protection**: Ensure business-critical variables (e.g., debt-to-income, credit bureau score) are never removed, regardless of their statistical properties.
141
+ - 📋 **Regulatory Audit Trail**: Automatically produces a full governance table explaining why every single column was accepted or eliminated (e.g., `low_iv (0.012)`, `correlated (r=0.962)`, `high_cardinality (>200)`, or `datetime_column`).
142
+ - 🔄 **Dynamic Threshold Relaxation**: Automatically adjusts correlation thresholds if filtering becomes overly aggressive, keeping feature counts within target bounds (`expected_final_min`, `expected_final_max`).
143
+
144
+ ---
145
+
146
+ ## Installation
147
+
148
+ ### From PyPI
149
+ ```bash
150
+ pip install feature-pruning
151
+ ```
152
+
153
+ ### For Local Development
154
+ ```bash
155
+ git clone https://github.com/vrukshya/feature_pruning.git
156
+ cd feature_pruning
157
+ pip install -e ".[dev]"
158
+ ```
159
+
160
+ ### In Databricks / Cloud Notebooks
161
+ In your Databricks notebook cell:
162
+ ```python
163
+ %pip install feature-pruning
164
+ ```
165
+ Or add `feature-pruning` to your Databricks cluster libraries.
166
+
167
+ ---
168
+
169
+ ## Quickstart
170
+
171
+ ```python
172
+ from pyspark.sql import SparkSession
173
+ from feature_pruning import FeatureSelectionPipeline
174
+
175
+ # 1. Initialize Spark session (or use active session in Databricks/EMR)
176
+ spark = SparkSession.builder.appName("CreditRiskScorecard").getOrCreate()
177
+
178
+ # 2. Load credit training data
179
+ df = spark.table("risk_catalog.credit_data.application_train")
180
+
181
+ # 3. Configure the feature selection pipeline
182
+ pipeline = FeatureSelectionPipeline(
183
+ df=df,
184
+ target_col="default_flag", # 0 = Good loan, 1 = Default / Bad loan
185
+ mandatory_features=["bureau_score", "dti_ratio"], # Keep regardless of correlation
186
+ exclude_features=["application_id", "ssn_hash"], # Exclude identifiers
187
+ iv_threshold=0.03, # Industry baseline: IV >= 0.03
188
+ corr_threshold=0.95, # Multicollinearity cutoff
189
+ expected_final_min=20,
190
+ expected_final_max=150,
191
+ verbose=True,
192
+ )
193
+
194
+ # 4. Execute pipeline
195
+ selected_spark_df, audit_report = pipeline.run()
196
+
197
+ # 5. Review results
198
+ print("Selected features count:", len(pipeline.get_selected_columns()))
199
+ print("Selected columns:", pipeline.get_selected_columns())
200
+
201
+ # 6. Inspect audit report
202
+ print(audit_report.head(20))
203
+ ```
204
+
205
+ ---
206
+
207
+ ## Inspection & Diagnostic Methods
208
+
209
+ After calling `pipeline.run()`, several diagnostic helpers allow inspection of the feature reduction decisions:
210
+
211
+ ```python
212
+ # 1. Retrieve list of final selected feature names
213
+ selected_features = pipeline.get_selected_columns()
214
+
215
+ # 2. Inspect Information Value ranking for all evaluated features
216
+ iv_summary = pipeline.get_iv_summary()
217
+ print(iv_summary.head(10))
218
+
219
+ # 3. Inspect which features were pruned due to correlation and their collinear counterpart
220
+ correlation_drops = pipeline.get_correlation_drops()
221
+ print(correlation_drops.head(10))
222
+
223
+ # 4. Full audit report with exact exclusion reasons
224
+ print(pipeline.feature_report_)
225
+ ```
226
+
227
+ ### Sample Audit Report Output
228
+
229
+ | feature | dtype | iv | correlated_with | correlation_value | is_selected | exclusion_reason |
230
+ |---|---|---|---|---|---|---|
231
+ | `bureau_score` | numeric | 0.4521 | None | None | True | |
232
+ | `utilization_rate`| numeric | 0.3180 | None | None | True | |
233
+ | `num_inquiries_6m` | numeric | 0.1420 | None | None | True | |
234
+ | `num_inquiries_3m` | numeric | 0.1210 | `num_inquiries_6m`| 0.965 | False | correlated (r=0.965) |
235
+ | `employer_name` | categorical | None | None | None | False | high_cardinality (>200) |
236
+ | `postal_code_raw`| numeric | 0.0120 | None | None | False | low_iv (0.0120) |
237
+ | `application_date`| datetime | None | None | None | False | datetime_column |
238
+
239
+ ---
240
+
241
+ ## API Reference
242
+
243
+ ### `FeatureSelectionPipeline`
244
+
245
+ ```python
246
+ FeatureSelectionPipeline(
247
+ df: SparkDataFrame,
248
+ target_col: str,
249
+ mandatory_features: Optional[List[str]] = None,
250
+ exclude_features: Optional[List[str]] = None,
251
+ iv_threshold: float = 0.03,
252
+ iv_n_bins: int = 100,
253
+ iv_sample_rows: int = 1_000_000,
254
+ corr_threshold: float = 0.95,
255
+ corr_sample_rows: int = 500_000,
256
+ max_corr_features: int = 5000,
257
+ max_cat_levels: int = 200,
258
+ expected_final_min: int = 200,
259
+ expected_final_max: int = 1000,
260
+ downcast: bool = True,
261
+ verbose: bool = True,
262
+ )
263
+ ```
264
+
265
+ | Parameter | Type | Default | Description |
266
+ |---|---|---|---|
267
+ | `df` | `SparkDataFrame` | *Required* | Input Spark DataFrame containing raw candidate variables and target. |
268
+ | `target_col` | `str` | *Required* | Name of the binary target (0 = Good, 1 = Bad). Case-insensitive. |
269
+ | `mandatory_features` | `List[str]` | `None` | Columns guaranteed to be retained regardless of IV or correlation. |
270
+ | `exclude_features` | `List[str]` | `None` | Columns explicitly excluded from candidate pool (IDs, timestamps). |
271
+ | `iv_threshold` | `float` | `0.03` | Minimum Information Value (IV) required for feature inclusion. |
272
+ | `iv_n_bins` | `int` | `100` | Quantile bin resolution for continuous variable histogram computation. |
273
+ | `iv_sample_rows` | `int` | `1,000,000` | Sample ceiling for computing quantile thresholds on continuous columns. |
274
+ | `corr_threshold` | `float` | `0.95` | Pearson correlation ceiling. Collinear variable with lower IV is pruned. |
275
+ | `corr_sample_rows` | `int` | `500,000` | Sample ceiling for Pearson correlation matrix calculation. |
276
+ | `max_corr_features` | `int` | `5000` | Upper limit of top IV features fed into correlation assembler. |
277
+ | `max_cat_levels` | `int` | `200` | Maximum unique levels allowed before categorical is dropped as high-cardinality. |
278
+ | `expected_final_min` | `int` | `200` | Minimum retained count. Relaxes `corr_threshold` if pruned too aggressively. |
279
+ | `expected_final_max` | `int` | `1000` | Maximum cap on final retained variables. |
280
+ | `downcast` | `bool` | `True` | Downcasts Decimal/Double columns to Float32 to optimize Spark worker memory. |
281
+ | `verbose` | `bool` | `True` | Prints stage progress and execution timing logs. |
282
+
283
+ ---
284
+
285
+ ## Credit Risk Scorecard Rules of Thumb
286
+
287
+ ### Information Value (IV) Benchmarks
288
+
289
+ In credit risk modeling (Siddiqi, 2005), Information Value serves as the primary metric for filtering out uninformative signals:
290
+
291
+ | Information Value (IV) | Predictive Power | Action in Scorecard Development |
292
+ |---|---|---|
293
+ | **< 0.02** | Unpredictive | **Drop**: Adds noise and degrees of freedom without signal. |
294
+ | **0.02 – 0.10** | Weak Predictor | **Evaluate**: May be retained if part of a key credit policy dimension. |
295
+ | **0.10 – 0.30** | Medium Predictor | **Keep**: Core candidate for scorecard inclusion. |
296
+ | **0.30 – 0.50** | Strong Predictor | **Keep**: High diagnostic quality feature. |
297
+ | **> 0.50** | Suspicious / Too Good | **Investigate**: Often indicative of target leakage or operational bias. |
298
+
299
+ ### Correlation Thresholds
300
+
301
+ - Standard practice sets the correlation threshold between `0.80` and `0.95`.
302
+ - Setting `corr_threshold=0.95` catches near-duplicate metrics (e.g., balance in dollars vs. balance in thousands).
303
+ - Setting `corr_threshold=0.85` produces a tighter, more orthogonal set of features that prevents variance inflation in final logistic regression models.
304
+
305
+ ---
306
+
307
+ ## Performance & Spark Optimization
308
+
309
+ - **Quantile Binning (`mapInPandas`)**: Rather than running expensive full-dataset sorting on each column, `feature_pruning` samples continuous variables to establish robust quantile boundaries, then computes distributed frequency histograms across partitions in a single pass.
310
+ - **Spark Storage Management**: Intermediate working DataFrames are cached at `StorageLevel.MEMORY_AND_DISK` and unpersisted automatically at the conclusion of report generation.
311
+ - **Vector Correlation**: Correlation is calculated using Spark ML's native distributed linear algebra (`Correlation.corr`), supporting thousands of features simultaneously.
312
+
313
+ ---
314
+
315
+ ## Contributing
316
+
317
+ Contributions, bug reports, and feature requests are welcome!
318
+ Please feel free to submit a pull request or open an issue on GitHub.
319
+
320
+ 1. Fork the Project
321
+ 2. Create your Feature Branch (`git checkout -b feature/AmazingFeature`)
322
+ 3. Commit your Changes (`git commit -m 'Add some AmazingFeature'`)
323
+ 4. Push to the Branch (`git push origin feature/AmazingFeature`)
324
+ 5. Open a Pull Request
325
+
326
+ ---
327
+
328
+ ## License
329
+
330
+ Distributed under the MIT License. See [LICENSE.txt](LICENSE.txt) for more details.
@@ -0,0 +1,7 @@
1
+ feature_pruning/__init__.py,sha256=u3GiIQIRMSJVV-Q2mHSx193C68XJBwPViioxwFHlqlY,1407
2
+ feature_pruning/core.py,sha256=SbTNSoyBvXV0y78_fN74rYntD7XxgpD-3yjqd_4k8FM,23851
3
+ feature_pruning-0.1.0.dist-info/licenses/LICENSE.txt,sha256=Ifzkhdu7jmu8cJ7gJ9kb3HPfz2ZTSwJ6B6BUhJAXjm4,1088
4
+ feature_pruning-0.1.0.dist-info/METADATA,sha256=NzEQJbUyS6E8rgDRSHYJy2PRglu_hCD1Uy1L0hfaDqU,20280
5
+ feature_pruning-0.1.0.dist-info/WHEEL,sha256=YVMoNqKzERt-wjUZwJ33xBGAwnFl-4cqbYkTtWa4itE,91
6
+ feature_pruning-0.1.0.dist-info/top_level.txt,sha256=mC52rgCaN2tZ8Nmrgb9cfNYSRWXfzFPC_CrWcmoQQ_w,16
7
+ feature_pruning-0.1.0.dist-info/RECORD,,
@@ -0,0 +1,5 @@
1
+ Wheel-Version: 1.0
2
+ Generator: setuptools (84.0.0)
3
+ Root-Is-Purelib: true
4
+ Tag: py3-none-any
5
+
@@ -0,0 +1,21 @@
1
+ MIT License
2
+
3
+ Copyright (c) 2026 Vrukshya Org
4
+
5
+ Permission is hereby granted, free of charge, to any person obtaining a copy
6
+ of this software and associated documentation files (the "Software"), to deal
7
+ in the Software without restriction, including without limitation the rights
8
+ to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
9
+ copies of the Software, and to permit persons to whom the Software is
10
+ furnished to do so, subject to the following conditions:
11
+
12
+ The above copyright notice and this permission notice shall be included in all
13
+ copies or substantial portions of the Software.
14
+
15
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
16
+ IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
17
+ FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
18
+ AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
19
+ LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
20
+ OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
21
+ SOFTWARE.
@@ -0,0 +1 @@
1
+ feature_pruning