evidencematrix 0.1.0__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- evidencematrix/__init__.py +18 -0
- evidencematrix/audit.py +25 -0
- evidencematrix/cli.py +101 -0
- evidencematrix/matrix.py +60 -0
- evidencematrix/model.py +88 -0
- evidencematrix/output.py +152 -0
- evidencematrix/parser.py +88 -0
- evidencematrix/validation.py +212 -0
- evidencematrix-0.1.0.dist-info/METADATA +150 -0
- evidencematrix-0.1.0.dist-info/RECORD +14 -0
- evidencematrix-0.1.0.dist-info/WHEEL +5 -0
- evidencematrix-0.1.0.dist-info/entry_points.txt +2 -0
- evidencematrix-0.1.0.dist-info/licenses/LICENSE +201 -0
- evidencematrix-0.1.0.dist-info/top_level.txt +1 -0
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"""A deterministic source-coverage audit tool for multi-source datasets."""
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from evidencematrix.matrix import build_matrix, summarize_matrix
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from evidencematrix.model import CoverageStatus, SourceAvailability
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from evidencematrix.parser import load_manifest
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from evidencematrix.validation import ManifestError, validate_document
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__all__ = [
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"CoverageStatus",
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"ManifestError",
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"SourceAvailability",
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"build_matrix",
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"load_manifest",
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"summarize_matrix",
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"validate_document",
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]
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__version__ = "0.1.0"
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evidencematrix/audit.py
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"""Coverage finding selection without subjective scoring."""
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from __future__ import annotations
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from evidencematrix.model import (
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COVERAGE_STATUS_ORDER,
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UNRESOLVED_STATUSES,
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AuditReport,
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CoverageRecord,
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)
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def audit_matrix(matrix: tuple[CoverageRecord, ...]) -> AuditReport:
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"""Return unresolved relationships; supported and not-applicable rows are excluded."""
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counts = {status.value: 0 for status in COVERAGE_STATUS_ORDER}
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for record in matrix:
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counts[record.status.value] += 1
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findings = tuple(record for record in matrix if record.status in UNRESOLVED_STATUSES)
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return AuditReport(
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relationship_count=len(matrix),
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status_counts=counts,
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finding_count=len(findings),
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findings=findings,
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)
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evidencematrix/cli.py
ADDED
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"""Command line interface for EvidenceMatrix."""
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from __future__ import annotations
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import argparse
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import json
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import sys
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from collections.abc import Sequence
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from pathlib import Path
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from evidencematrix.audit import audit_matrix
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from evidencematrix.matrix import build_matrix, summarize_matrix
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from evidencematrix.output import (
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audit_to_dict,
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build_artifacts,
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summary_to_dict,
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write_artifacts,
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)
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from evidencematrix.parser import load_manifest
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from evidencematrix.validation import ManifestError
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def _parser() -> argparse.ArgumentParser:
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parser = argparse.ArgumentParser(
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prog="evidencematrix",
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description="Build deterministic entity-by-source coverage audits.",
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)
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commands = parser.add_subparsers(dest="command", required=True)
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for command in ("validate", "build", "audit", "summary"):
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subparser = commands.add_parser(command)
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subparser.add_argument(
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"path", type=Path, help="manifest file or directory containing one manifest"
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)
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if command == "build":
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subparser.add_argument("--output", type=Path, default=Path("evidencematrix-output"))
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if command in {"audit", "summary"}:
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subparser.add_argument("--format", choices=("text", "json"), default="text")
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return parser
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def _status_text(counts: dict[str, int]) -> str:
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return "\n".join(f"{status}: {count}" for status, count in counts.items())
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def _run(args: argparse.Namespace) -> int:
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manifest = load_manifest(args.path)
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if args.command == "validate":
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print(f"valid: {args.path}")
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return 0
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matrix = build_matrix(manifest)
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summary = summarize_matrix(manifest, matrix)
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if args.command == "build":
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artifacts = build_artifacts(manifest, matrix, summary)
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paths = write_artifacts(artifacts, args.output)
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print(f"built {len(paths)} artifacts: {args.output}")
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return 0
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if args.command == "audit":
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report = audit_matrix(matrix)
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if args.format == "json":
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print(json.dumps(audit_to_dict(matrix), ensure_ascii=False, sort_keys=True, indent=2))
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else:
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print(f"Relationships: {report.relationship_count}")
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print(f"Unresolved findings: {report.finding_count}")
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print(
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"\n".join(
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f"{status}: {count}"
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for status, count in report.status_counts.items()
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if status not in {"supported", "not_applicable"}
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)
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)
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print(f"not_applicable (excluded): {report.status_counts['not_applicable']}")
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return 1 if report.finding_count else 0
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if args.command == "summary":
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if args.format == "json":
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print(
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json.dumps(summary_to_dict(summary), ensure_ascii=False, sort_keys=True, indent=2)
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)
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else:
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print(f"Entities: {summary.entity_count}")
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print(f"Sources: {summary.source_count}")
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print(f"Relationships: {summary.relationship_count}")
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print(_status_text(summary.status_counts))
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print(f"Unresolved findings: {summary.finding_count}")
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return 0
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raise AssertionError(f"unhandled command: {args.command}")
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def main(argv: Sequence[str] | None = None) -> int:
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"""Run a CLI command and return its documented process exit code."""
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args = _parser().parse_args(argv)
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try:
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return _run(args)
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except (ManifestError, OSError) as exc:
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print(f"evidencematrix: error: {exc}", file=sys.stderr)
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return 2
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def entrypoint() -> None:
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raise SystemExit(main())
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evidencematrix/matrix.py
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"""Pure entity-by-source coverage expansion and counting."""
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from __future__ import annotations
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from evidencematrix.model import (
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COVERAGE_STATUS_ORDER,
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UNRESOLVED_STATUSES,
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CoverageRecord,
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CoverageStatus,
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Manifest,
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SourceAvailability,
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Summary,
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)
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def build_matrix(manifest: Manifest) -> tuple[CoverageRecord, ...]:
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"""Expand every entity/source pair, preserving explicit unknowns and gaps."""
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declarations = {(item.entity, item.source): item for item in manifest.coverage}
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records: list[CoverageRecord] = []
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for entity in sorted(manifest.entities, key=lambda item: item.id):
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for source in sorted(manifest.sources, key=lambda item: item.id):
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declaration = declarations.get((entity.id, source.id))
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if declaration is not None:
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status = declaration.status
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reason = declaration.reason
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elif source.availability is SourceAvailability.UNAVAILABLE:
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status = CoverageStatus.SOURCE_UNAVAILABLE
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reason = "source_declared_unavailable"
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elif source.availability is SourceAvailability.NOT_IN_RELEASE:
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status = CoverageStatus.SOURCE_NOT_IN_RELEASE
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reason = "source_declared_not_in_release"
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else:
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status = CoverageStatus.UNKNOWN
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reason = "coverage_not_declared"
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records.append(
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CoverageRecord(
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entity_id=entity.id,
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source_id=source.id,
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source_availability=source.availability,
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status=status,
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reason=reason,
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)
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)
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return tuple(records)
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def summarize_matrix(manifest: Manifest, matrix: tuple[CoverageRecord, ...]) -> Summary:
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"""Count matrix rows by status; not-applicable rows are not audit findings."""
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counts = {status.value: 0 for status in COVERAGE_STATUS_ORDER}
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for record in matrix:
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counts[record.status.value] += 1
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return Summary(
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entity_count=len(manifest.entities),
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source_count=len(manifest.sources),
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relationship_count=len(matrix),
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status_counts=counts,
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finding_count=sum(counts[status.value] for status in UNRESOLVED_STATUSES),
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)
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evidencematrix/model.py
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"""Typed, immutable data structures for coverage manifests and reports."""
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from __future__ import annotations
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from dataclasses import dataclass
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from enum import StrEnum
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class SourceAvailability(StrEnum):
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AVAILABLE = "available"
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UNAVAILABLE = "unavailable"
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NOT_IN_RELEASE = "not_in_release"
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UNKNOWN = "unknown"
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class CoverageStatus(StrEnum):
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SUPPORTED = "supported"
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METADATA_GAP = "metadata_gap"
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MAPPING_GAP = "mapping_gap"
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SOURCE_UNAVAILABLE = "source_unavailable"
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SOURCE_NOT_IN_RELEASE = "source_not_in_release"
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NOT_APPLICABLE = "not_applicable"
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UNKNOWN = "unknown"
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COVERAGE_STATUS_ORDER = tuple(CoverageStatus)
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UNRESOLVED_STATUSES = frozenset(
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{
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CoverageStatus.METADATA_GAP,
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CoverageStatus.MAPPING_GAP,
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CoverageStatus.SOURCE_UNAVAILABLE,
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CoverageStatus.SOURCE_NOT_IN_RELEASE,
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CoverageStatus.UNKNOWN,
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}
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)
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@dataclass(frozen=True, slots=True)
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class Entity:
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id: str
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@dataclass(frozen=True, slots=True)
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class Source:
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id: str
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availability: SourceAvailability
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@dataclass(frozen=True, slots=True)
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class Coverage:
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entity: str
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source: str
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status: CoverageStatus
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reason: str | None = None
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@dataclass(frozen=True, slots=True)
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class Manifest:
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version: int
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entities: tuple[Entity, ...]
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sources: tuple[Source, ...]
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coverage: tuple[Coverage, ...]
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@dataclass(frozen=True, slots=True)
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class CoverageRecord:
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entity_id: str
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source_id: str
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source_availability: SourceAvailability
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status: CoverageStatus
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reason: str | None
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@dataclass(frozen=True, slots=True)
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class Summary:
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entity_count: int
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source_count: int
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relationship_count: int
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status_counts: dict[str, int]
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finding_count: int
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@dataclass(frozen=True, slots=True)
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class AuditReport:
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relationship_count: int
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status_counts: dict[str, int]
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finding_count: int
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findings: tuple[CoverageRecord, ...]
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evidencematrix/output.py
ADDED
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"""Deterministic machine and human readable report rendering."""
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from __future__ import annotations
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import csv
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import io
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import json
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from pathlib import Path
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from evidencematrix.audit import audit_matrix
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from evidencematrix.model import (
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COVERAGE_STATUS_ORDER,
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UNRESOLVED_STATUSES,
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CoverageRecord,
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Manifest,
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Summary,
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)
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ARTIFACT_NAMES = (
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"coverage_matrix.csv",
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"coverage_report.json",
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"gap_report.json",
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"summary.json",
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"coverage_report.md",
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)
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CSV_FIELDS = ("entity_id", "source_id", "source_availability", "status", "reason")
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def _json_bytes(value: object) -> bytes:
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return (json.dumps(value, ensure_ascii=False, sort_keys=True, indent=2) + "\n").encode("utf-8")
|
|
31
|
+
|
|
32
|
+
|
|
33
|
+
def record_to_dict(record: CoverageRecord) -> dict[str, str | None]:
|
|
34
|
+
return {
|
|
35
|
+
"entity_id": record.entity_id,
|
|
36
|
+
"source_id": record.source_id,
|
|
37
|
+
"source_availability": record.source_availability.value,
|
|
38
|
+
"status": record.status.value,
|
|
39
|
+
"reason": record.reason,
|
|
40
|
+
}
|
|
41
|
+
|
|
42
|
+
|
|
43
|
+
def summary_to_dict(summary: Summary) -> dict[str, object]:
|
|
44
|
+
return {
|
|
45
|
+
"schema_version": 1,
|
|
46
|
+
"entity_count": summary.entity_count,
|
|
47
|
+
"source_count": summary.source_count,
|
|
48
|
+
"relationship_count": summary.relationship_count,
|
|
49
|
+
"status_counts": summary.status_counts,
|
|
50
|
+
"finding_count": summary.finding_count,
|
|
51
|
+
}
|
|
52
|
+
|
|
53
|
+
|
|
54
|
+
def audit_to_dict(matrix: tuple[CoverageRecord, ...]) -> dict[str, object]:
|
|
55
|
+
audit = audit_matrix(matrix)
|
|
56
|
+
return {
|
|
57
|
+
"schema_version": 1,
|
|
58
|
+
"relationship_count": audit.relationship_count,
|
|
59
|
+
"finding_count": audit.finding_count,
|
|
60
|
+
"status_counts": {
|
|
61
|
+
status.value: audit.status_counts[status.value]
|
|
62
|
+
for status in COVERAGE_STATUS_ORDER
|
|
63
|
+
if status in UNRESOLVED_STATUSES
|
|
64
|
+
},
|
|
65
|
+
"not_applicable_count": audit.status_counts["not_applicable"],
|
|
66
|
+
"findings": [record_to_dict(item) for item in audit.findings],
|
|
67
|
+
}
|
|
68
|
+
|
|
69
|
+
|
|
70
|
+
def build_artifacts(
|
|
71
|
+
manifest: Manifest,
|
|
72
|
+
matrix: tuple[CoverageRecord, ...],
|
|
73
|
+
summary: Summary,
|
|
74
|
+
) -> dict[str, bytes]:
|
|
75
|
+
"""Render all version 1 artifacts in memory with stable byte representations."""
|
|
76
|
+
|
|
77
|
+
csv_output = io.StringIO(newline="")
|
|
78
|
+
writer = csv.DictWriter(csv_output, fieldnames=CSV_FIELDS, lineterminator="\n")
|
|
79
|
+
writer.writeheader()
|
|
80
|
+
for record in matrix:
|
|
81
|
+
row = record_to_dict(record)
|
|
82
|
+
writer.writerow({field: "" if row[field] is None else row[field] for field in CSV_FIELDS})
|
|
83
|
+
|
|
84
|
+
report = {
|
|
85
|
+
"schema_version": 1,
|
|
86
|
+
"version": manifest.version,
|
|
87
|
+
"entities": [
|
|
88
|
+
{"id": item.id} for item in sorted(manifest.entities, key=lambda item: item.id)
|
|
89
|
+
],
|
|
90
|
+
"sources": [
|
|
91
|
+
{"id": item.id, "availability": item.availability.value}
|
|
92
|
+
for item in sorted(manifest.sources, key=lambda item: item.id)
|
|
93
|
+
],
|
|
94
|
+
"relationships": [record_to_dict(record) for record in matrix],
|
|
95
|
+
}
|
|
96
|
+
audit = audit_to_dict(matrix)
|
|
97
|
+
markdown = [
|
|
98
|
+
"# EvidenceMatrix coverage report",
|
|
99
|
+
"",
|
|
100
|
+
f"- Entities: {summary.entity_count}",
|
|
101
|
+
f"- Sources: {summary.source_count}",
|
|
102
|
+
f"- Relationships: {summary.relationship_count}",
|
|
103
|
+
f"- Unresolved findings: {summary.finding_count}",
|
|
104
|
+
"",
|
|
105
|
+
"## Coverage status counts",
|
|
106
|
+
"",
|
|
107
|
+
]
|
|
108
|
+
markdown.extend(f"- `{status}`: {count}" for status, count in summary.status_counts.items())
|
|
109
|
+
markdown.extend(
|
|
110
|
+
[
|
|
111
|
+
"",
|
|
112
|
+
"## Unresolved relationships",
|
|
113
|
+
"",
|
|
114
|
+
"| Entity | Source | Status | Reason |",
|
|
115
|
+
"| --- | --- | --- | --- |",
|
|
116
|
+
]
|
|
117
|
+
)
|
|
118
|
+
if audit["findings"]:
|
|
119
|
+
for item in audit["findings"]:
|
|
120
|
+
assert isinstance(item, dict)
|
|
121
|
+
values = [item["entity_id"], item["source_id"], item["status"], item["reason"] or ""]
|
|
122
|
+
escaped = [str(value).replace("|", "\\|").replace("\n", " ") for value in values]
|
|
123
|
+
markdown.append("| " + " | ".join(escaped) + " |")
|
|
124
|
+
else:
|
|
125
|
+
markdown.append("| — | — | — | No unresolved relationships |")
|
|
126
|
+
markdown_text = "\n".join(markdown) + "\n"
|
|
127
|
+
summary_payload = summary_to_dict(summary)
|
|
128
|
+
|
|
129
|
+
return {
|
|
130
|
+
"coverage_matrix.csv": csv_output.getvalue().encode("utf-8"),
|
|
131
|
+
"coverage_report.json": _json_bytes(report),
|
|
132
|
+
"gap_report.json": _json_bytes(audit),
|
|
133
|
+
"summary.json": _json_bytes(summary_payload),
|
|
134
|
+
"coverage_report.md": markdown_text.encode("utf-8"),
|
|
135
|
+
}
|
|
136
|
+
|
|
137
|
+
|
|
138
|
+
def write_artifacts(artifacts: dict[str, bytes], output_dir: str | Path) -> tuple[Path, ...]:
|
|
139
|
+
"""Write a complete pre-rendered artifact set to the requested directory."""
|
|
140
|
+
|
|
141
|
+
root = Path(output_dir).expanduser()
|
|
142
|
+
if root.exists() and not root.is_dir():
|
|
143
|
+
raise OSError(f"output path is not a directory: {root}")
|
|
144
|
+
root.mkdir(parents=True, exist_ok=True)
|
|
145
|
+
written: list[Path] = []
|
|
146
|
+
for name in ARTIFACT_NAMES:
|
|
147
|
+
destination = root / name
|
|
148
|
+
temporary = root / f".{name}.tmp"
|
|
149
|
+
temporary.write_bytes(artifacts[name])
|
|
150
|
+
temporary.replace(destination)
|
|
151
|
+
written.append(destination)
|
|
152
|
+
return tuple(written)
|
evidencematrix/parser.py
ADDED
|
@@ -0,0 +1,88 @@
|
|
|
1
|
+
"""Offline YAML and JSON manifest loading."""
|
|
2
|
+
|
|
3
|
+
from __future__ import annotations
|
|
4
|
+
|
|
5
|
+
import json
|
|
6
|
+
from pathlib import Path
|
|
7
|
+
from typing import Any
|
|
8
|
+
|
|
9
|
+
import yaml
|
|
10
|
+
|
|
11
|
+
from evidencematrix.model import Manifest
|
|
12
|
+
from evidencematrix.validation import ManifestError, validate_document
|
|
13
|
+
|
|
14
|
+
|
|
15
|
+
class _UniqueKeyLoader(yaml.SafeLoader):
|
|
16
|
+
def construct_mapping(self, node: yaml.MappingNode, deep: bool = False) -> dict[Any, Any]:
|
|
17
|
+
self.flatten_mapping(node)
|
|
18
|
+
result: dict[Any, Any] = {}
|
|
19
|
+
for key_node, value_node in node.value:
|
|
20
|
+
key = self.construct_object(key_node, deep=deep)
|
|
21
|
+
try:
|
|
22
|
+
duplicate = key in result
|
|
23
|
+
except TypeError as exc:
|
|
24
|
+
raise yaml.constructor.ConstructorError(
|
|
25
|
+
"while constructing a mapping",
|
|
26
|
+
node.start_mark,
|
|
27
|
+
"found an unhashable key",
|
|
28
|
+
key_node.start_mark,
|
|
29
|
+
) from exc
|
|
30
|
+
if duplicate:
|
|
31
|
+
raise yaml.constructor.ConstructorError(
|
|
32
|
+
"while constructing a mapping",
|
|
33
|
+
node.start_mark,
|
|
34
|
+
f"found duplicate key {key!r}",
|
|
35
|
+
key_node.start_mark,
|
|
36
|
+
)
|
|
37
|
+
result[key] = self.construct_object(value_node, deep=deep)
|
|
38
|
+
return result
|
|
39
|
+
|
|
40
|
+
|
|
41
|
+
def _json_object(pairs: list[tuple[str, Any]]) -> dict[str, Any]:
|
|
42
|
+
result: dict[str, Any] = {}
|
|
43
|
+
for key, value in pairs:
|
|
44
|
+
if key in result:
|
|
45
|
+
raise ValueError(f"duplicate key {key!r}")
|
|
46
|
+
result[key] = value
|
|
47
|
+
return result
|
|
48
|
+
|
|
49
|
+
|
|
50
|
+
def _manifest_path(path: Path) -> Path:
|
|
51
|
+
if path.is_dir():
|
|
52
|
+
candidates = sorted(
|
|
53
|
+
candidate
|
|
54
|
+
for candidate in path.iterdir()
|
|
55
|
+
if candidate.is_file() and candidate.suffix.casefold() in {".yaml", ".yml", ".json"}
|
|
56
|
+
)
|
|
57
|
+
if len(candidates) != 1:
|
|
58
|
+
raise ManifestError(
|
|
59
|
+
"input directory must contain exactly one .yaml, .yml, or .json manifest; "
|
|
60
|
+
f"found {len(candidates)}"
|
|
61
|
+
)
|
|
62
|
+
return candidates[0]
|
|
63
|
+
if not path.is_file():
|
|
64
|
+
raise ManifestError(f"input path is not a file or directory: {path}")
|
|
65
|
+
if path.suffix.casefold() not in {".yaml", ".yml", ".json"}:
|
|
66
|
+
raise ManifestError(f"manifest file must end in .yaml, .yml, or .json: {path.name}")
|
|
67
|
+
return path
|
|
68
|
+
|
|
69
|
+
|
|
70
|
+
def _parse_text(text: str, *, suffix: str) -> Any:
|
|
71
|
+
if suffix.casefold() == ".json":
|
|
72
|
+
return json.loads(text, object_pairs_hook=_json_object)
|
|
73
|
+
return yaml.load(text, Loader=_UniqueKeyLoader)
|
|
74
|
+
|
|
75
|
+
|
|
76
|
+
def load_manifest(path: str | Path) -> Manifest:
|
|
77
|
+
"""Load and validate one YAML or JSON manifest from a file or directory."""
|
|
78
|
+
|
|
79
|
+
selected_path = _manifest_path(Path(path).expanduser())
|
|
80
|
+
try:
|
|
81
|
+
text = selected_path.read_text(encoding="utf-8")
|
|
82
|
+
except (OSError, UnicodeError) as exc:
|
|
83
|
+
raise ManifestError(f"cannot read manifest {selected_path}: {exc}") from exc
|
|
84
|
+
try:
|
|
85
|
+
document = _parse_text(text, suffix=selected_path.suffix)
|
|
86
|
+
except (json.JSONDecodeError, yaml.YAMLError, ValueError) as exc:
|
|
87
|
+
raise ManifestError(f"cannot parse manifest {selected_path}: {exc}") from exc
|
|
88
|
+
return validate_document(document)
|
|
@@ -0,0 +1,212 @@
|
|
|
1
|
+
"""Manifest validation and conversion into the public model."""
|
|
2
|
+
|
|
3
|
+
from __future__ import annotations
|
|
4
|
+
|
|
5
|
+
from collections.abc import Mapping
|
|
6
|
+
from typing import Any
|
|
7
|
+
|
|
8
|
+
from evidencematrix.model import (
|
|
9
|
+
COVERAGE_STATUS_ORDER,
|
|
10
|
+
Coverage,
|
|
11
|
+
CoverageStatus,
|
|
12
|
+
Entity,
|
|
13
|
+
Manifest,
|
|
14
|
+
Source,
|
|
15
|
+
SourceAvailability,
|
|
16
|
+
)
|
|
17
|
+
|
|
18
|
+
|
|
19
|
+
class ManifestError(ValueError):
|
|
20
|
+
"""Raised when an input manifest is malformed or internally inconsistent."""
|
|
21
|
+
|
|
22
|
+
|
|
23
|
+
def _mapping(value: Any, *, field: str, errors: list[str]) -> Mapping[str, Any] | None:
|
|
24
|
+
if not isinstance(value, Mapping):
|
|
25
|
+
errors.append(f"{field} must be a mapping")
|
|
26
|
+
return None
|
|
27
|
+
if any(not isinstance(key, str) for key in value):
|
|
28
|
+
errors.append(f"{field} keys must be strings")
|
|
29
|
+
return None
|
|
30
|
+
return value
|
|
31
|
+
|
|
32
|
+
|
|
33
|
+
def _check_fields(
|
|
34
|
+
value: Mapping[str, Any],
|
|
35
|
+
*,
|
|
36
|
+
required: set[str],
|
|
37
|
+
allowed: set[str],
|
|
38
|
+
field: str,
|
|
39
|
+
errors: list[str],
|
|
40
|
+
) -> None:
|
|
41
|
+
missing = sorted(required - value.keys())
|
|
42
|
+
unexpected = sorted(value.keys() - allowed)
|
|
43
|
+
if missing:
|
|
44
|
+
errors.append(f"{field} is missing required field(s): {', '.join(missing)}")
|
|
45
|
+
if unexpected:
|
|
46
|
+
errors.append(f"{field} has unknown field(s): {', '.join(unexpected)}")
|
|
47
|
+
|
|
48
|
+
|
|
49
|
+
def _identifier(value: Any, *, field: str, errors: list[str]) -> str | None:
|
|
50
|
+
if not isinstance(value, str) or not value or value.strip() != value:
|
|
51
|
+
errors.append(f"{field} must be a non-empty string without surrounding whitespace")
|
|
52
|
+
return None
|
|
53
|
+
return value
|
|
54
|
+
|
|
55
|
+
|
|
56
|
+
def validate_document(document: Any) -> Manifest:
|
|
57
|
+
"""Validate a parsed manifest document and return immutable typed data."""
|
|
58
|
+
|
|
59
|
+
errors: list[str] = []
|
|
60
|
+
root = _mapping(document, field="manifest", errors=errors)
|
|
61
|
+
if root is None:
|
|
62
|
+
raise ManifestError("invalid manifest: " + "; ".join(errors))
|
|
63
|
+
_check_fields(
|
|
64
|
+
root,
|
|
65
|
+
required={"version", "entities", "sources", "coverage"},
|
|
66
|
+
allowed={"version", "entities", "sources", "coverage"},
|
|
67
|
+
field="manifest",
|
|
68
|
+
errors=errors,
|
|
69
|
+
)
|
|
70
|
+
|
|
71
|
+
version = root.get("version")
|
|
72
|
+
if type(version) is not int or version != 1:
|
|
73
|
+
errors.append("version must be the integer 1")
|
|
74
|
+
|
|
75
|
+
raw_entities = root.get("entities")
|
|
76
|
+
entities: list[Entity] = []
|
|
77
|
+
entity_ids: set[str] = set()
|
|
78
|
+
if not isinstance(raw_entities, list):
|
|
79
|
+
errors.append("entities must be a list")
|
|
80
|
+
else:
|
|
81
|
+
for index, raw_entity in enumerate(raw_entities):
|
|
82
|
+
field = f"entities[{index}]"
|
|
83
|
+
entity = _mapping(raw_entity, field=field, errors=errors)
|
|
84
|
+
if entity is None:
|
|
85
|
+
continue
|
|
86
|
+
_check_fields(entity, required={"id"}, allowed={"id"}, field=field, errors=errors)
|
|
87
|
+
entity_id = _identifier(entity.get("id"), field=f"{field}.id", errors=errors)
|
|
88
|
+
if entity_id is None:
|
|
89
|
+
continue
|
|
90
|
+
if entity_id in entity_ids:
|
|
91
|
+
errors.append(f"duplicate entity id: {entity_id}")
|
|
92
|
+
else:
|
|
93
|
+
entity_ids.add(entity_id)
|
|
94
|
+
entities.append(Entity(id=entity_id))
|
|
95
|
+
|
|
96
|
+
raw_sources = root.get("sources")
|
|
97
|
+
sources: list[Source] = []
|
|
98
|
+
source_by_id: dict[str, Source] = {}
|
|
99
|
+
if not isinstance(raw_sources, list):
|
|
100
|
+
errors.append("sources must be a list")
|
|
101
|
+
else:
|
|
102
|
+
for index, raw_source in enumerate(raw_sources):
|
|
103
|
+
field = f"sources[{index}]"
|
|
104
|
+
source = _mapping(raw_source, field=field, errors=errors)
|
|
105
|
+
if source is None:
|
|
106
|
+
continue
|
|
107
|
+
_check_fields(
|
|
108
|
+
source,
|
|
109
|
+
required={"id", "availability"},
|
|
110
|
+
allowed={"id", "availability"},
|
|
111
|
+
field=field,
|
|
112
|
+
errors=errors,
|
|
113
|
+
)
|
|
114
|
+
source_id = _identifier(source.get("id"), field=f"{field}.id", errors=errors)
|
|
115
|
+
availability_value = source.get("availability")
|
|
116
|
+
try:
|
|
117
|
+
availability = SourceAvailability(availability_value)
|
|
118
|
+
except (ValueError, TypeError):
|
|
119
|
+
errors.append(
|
|
120
|
+
f"{field}.availability must be one of: "
|
|
121
|
+
+ ", ".join(item.value for item in SourceAvailability)
|
|
122
|
+
)
|
|
123
|
+
availability = None
|
|
124
|
+
if source_id is None or availability is None:
|
|
125
|
+
continue
|
|
126
|
+
if source_id in source_by_id:
|
|
127
|
+
errors.append(f"duplicate source id: {source_id}")
|
|
128
|
+
continue
|
|
129
|
+
parsed_source = Source(id=source_id, availability=availability)
|
|
130
|
+
source_by_id[source_id] = parsed_source
|
|
131
|
+
sources.append(parsed_source)
|
|
132
|
+
|
|
133
|
+
raw_coverage = root.get("coverage")
|
|
134
|
+
coverage: list[Coverage] = []
|
|
135
|
+
seen_pairs: set[tuple[str, str]] = set()
|
|
136
|
+
if not isinstance(raw_coverage, list):
|
|
137
|
+
errors.append("coverage must be a list")
|
|
138
|
+
else:
|
|
139
|
+
for index, raw_record in enumerate(raw_coverage):
|
|
140
|
+
field = f"coverage[{index}]"
|
|
141
|
+
record = _mapping(raw_record, field=field, errors=errors)
|
|
142
|
+
if record is None:
|
|
143
|
+
continue
|
|
144
|
+
_check_fields(
|
|
145
|
+
record,
|
|
146
|
+
required={"entity", "source", "status"},
|
|
147
|
+
allowed={"entity", "source", "status", "reason"},
|
|
148
|
+
field=field,
|
|
149
|
+
errors=errors,
|
|
150
|
+
)
|
|
151
|
+
entity_id = _identifier(record.get("entity"), field=f"{field}.entity", errors=errors)
|
|
152
|
+
source_id = _identifier(record.get("source"), field=f"{field}.source", errors=errors)
|
|
153
|
+
try:
|
|
154
|
+
status = CoverageStatus(record.get("status"))
|
|
155
|
+
except (ValueError, TypeError):
|
|
156
|
+
errors.append(
|
|
157
|
+
f"{field}.status is invalid; expected one of: "
|
|
158
|
+
+ ", ".join(item.value for item in COVERAGE_STATUS_ORDER)
|
|
159
|
+
)
|
|
160
|
+
status = None
|
|
161
|
+
reason = record.get("reason")
|
|
162
|
+
if reason is not None and (
|
|
163
|
+
not isinstance(reason, str) or not reason or reason.strip() != reason
|
|
164
|
+
):
|
|
165
|
+
errors.append(f"{field}.reason must be a non-empty string when supplied")
|
|
166
|
+
reason = None
|
|
167
|
+
if status is CoverageStatus.SUPPORTED and reason is not None:
|
|
168
|
+
errors.append(f"{field}.reason is only valid for non-supported coverage")
|
|
169
|
+
if entity_id is None or source_id is None or status is None:
|
|
170
|
+
continue
|
|
171
|
+
if entity_id not in entity_ids:
|
|
172
|
+
errors.append(f"{field} references unknown entity: {entity_id}")
|
|
173
|
+
if source_id not in source_by_id:
|
|
174
|
+
errors.append(f"{field} references unknown source: {source_id}")
|
|
175
|
+
pair = (entity_id, source_id)
|
|
176
|
+
if pair in seen_pairs:
|
|
177
|
+
errors.append(f"duplicate coverage relationship: {entity_id} × {source_id}")
|
|
178
|
+
else:
|
|
179
|
+
seen_pairs.add(pair)
|
|
180
|
+
source = source_by_id.get(source_id)
|
|
181
|
+
if source is not None:
|
|
182
|
+
conflicting_availability = {
|
|
183
|
+
CoverageStatus.SUPPORTED: {
|
|
184
|
+
SourceAvailability.UNAVAILABLE,
|
|
185
|
+
SourceAvailability.NOT_IN_RELEASE,
|
|
186
|
+
},
|
|
187
|
+
CoverageStatus.SOURCE_UNAVAILABLE: {
|
|
188
|
+
SourceAvailability.AVAILABLE,
|
|
189
|
+
SourceAvailability.NOT_IN_RELEASE,
|
|
190
|
+
},
|
|
191
|
+
CoverageStatus.SOURCE_NOT_IN_RELEASE: {
|
|
192
|
+
SourceAvailability.AVAILABLE,
|
|
193
|
+
SourceAvailability.UNAVAILABLE,
|
|
194
|
+
},
|
|
195
|
+
}.get(status, set())
|
|
196
|
+
if source.availability in conflicting_availability:
|
|
197
|
+
errors.append(
|
|
198
|
+
f"{field}.status {status.value} conflicts with source availability "
|
|
199
|
+
f"{source.availability.value}"
|
|
200
|
+
)
|
|
201
|
+
coverage.append(
|
|
202
|
+
Coverage(entity=entity_id, source=source_id, status=status, reason=reason)
|
|
203
|
+
)
|
|
204
|
+
|
|
205
|
+
if errors:
|
|
206
|
+
raise ManifestError("invalid manifest: " + "; ".join(errors))
|
|
207
|
+
return Manifest(
|
|
208
|
+
version=version,
|
|
209
|
+
entities=tuple(entities),
|
|
210
|
+
sources=tuple(sources),
|
|
211
|
+
coverage=tuple(coverage),
|
|
212
|
+
)
|
|
@@ -0,0 +1,150 @@
|
|
|
1
|
+
Metadata-Version: 2.4
|
|
2
|
+
Name: evidencematrix
|
|
3
|
+
Version: 0.1.0
|
|
4
|
+
Summary: A deterministic source-coverage audit tool for multi-source datasets
|
|
5
|
+
Author: KageRyo
|
|
6
|
+
License-Expression: Apache-2.0
|
|
7
|
+
Project-URL: Homepage, https://github.com/KageRyo/EvidenceMatrix
|
|
8
|
+
Project-URL: Repository, https://github.com/KageRyo/EvidenceMatrix
|
|
9
|
+
Project-URL: Issues, https://github.com/KageRyo/EvidenceMatrix/issues
|
|
10
|
+
Classifier: Development Status :: 3 - Alpha
|
|
11
|
+
Classifier: Environment :: Console
|
|
12
|
+
Classifier: Intended Audience :: Developers
|
|
13
|
+
Classifier: Operating System :: OS Independent
|
|
14
|
+
Classifier: Programming Language :: Python :: 3
|
|
15
|
+
Classifier: Programming Language :: Python :: 3.11
|
|
16
|
+
Classifier: Programming Language :: Python :: 3.12
|
|
17
|
+
Classifier: Programming Language :: Python :: 3.13
|
|
18
|
+
Classifier: Topic :: Database
|
|
19
|
+
Classifier: Topic :: Scientific/Engineering :: Information Analysis
|
|
20
|
+
Requires-Python: >=3.11
|
|
21
|
+
Description-Content-Type: text/markdown
|
|
22
|
+
License-File: LICENSE
|
|
23
|
+
Requires-Dist: PyYAML<7,>=6.0
|
|
24
|
+
Dynamic: license-file
|
|
25
|
+
|
|
26
|
+
# EvidenceMatrix
|
|
27
|
+
|
|
28
|
+
[](https://github.com/KageRyo/EvidenceMatrix/actions/workflows/ci.yml)
|
|
29
|
+
[](https://pypi.org/project/evidencematrix/)
|
|
30
|
+
[](https://github.com/KageRyo/EvidenceMatrix/releases)
|
|
31
|
+
[](https://www.python.org/)
|
|
32
|
+
[](LICENSE)
|
|
33
|
+
|
|
34
|
+
EvidenceMatrix builds deterministic coverage matrices for a declared set of entities and expected sources. It shows which relationships are supported, have known gaps, are unavailable, remain unknown, or do not apply.
|
|
35
|
+
|
|
36
|
+
EvidenceMatrix was extracted from source-coverage auditing patterns developed in a real-world multi-source data pipeline. It is a standalone tool and does not require that project or its data.
|
|
37
|
+
|
|
38
|
+
## What it does
|
|
39
|
+
|
|
40
|
+
- Validates a small YAML or JSON manifest of entities, sources, and coverage declarations.
|
|
41
|
+
- Expands the declared entities and sources into a complete, sorted entity-by-source matrix.
|
|
42
|
+
- Reports status counts and unresolved relationships without assigning a subjective quality score.
|
|
43
|
+
- Writes stable CSV, JSON, and Markdown reports without adding timestamps.
|
|
44
|
+
- Runs locally and offline after installation.
|
|
45
|
+
|
|
46
|
+
## What it does not do
|
|
47
|
+
|
|
48
|
+
EvidenceMatrix does not download or transform data, validate arbitrary dataset schemas, verify file integrity, build lineage graphs, align spatial data, manage workflows, or evaluate machine-learning models. Use [LineageGuard](https://github.com/KageRyo/LineageGuard) for artifact origin and lineage, [ReleaseGuard](https://github.com/KageRyo/ReleaseGuard) for dataset release structure and integrity, and [GridForge](https://github.com/KageRyo/GridForge) for spatial alignment.
|
|
49
|
+
|
|
50
|
+
## Installation
|
|
51
|
+
|
|
52
|
+
After a release is published, install it with `uv tool install evidencematrix` or `python -m pip install evidencematrix`. To run from a checkout, use Python 3.11 or newer and `uv sync --all-groups`, then prefix commands with `uv run`.
|
|
53
|
+
|
|
54
|
+
The runtime has one dependency, PyYAML, for safe YAML parsing. JSON input and all audit calculations work offline; the CLI makes no network requests.
|
|
55
|
+
|
|
56
|
+
## Quick start
|
|
57
|
+
|
|
58
|
+
The bundled [`examples/basic/coverage.yaml`](examples/basic/coverage.yaml) demonstrates supported, mapping-gap, metadata-gap, unavailable, not-in-release, not-applicable, and unknown relationships.
|
|
59
|
+
|
|
60
|
+
```bash
|
|
61
|
+
evidencematrix validate examples/basic
|
|
62
|
+
evidencematrix build examples/basic --output ./out
|
|
63
|
+
evidencematrix audit examples/basic
|
|
64
|
+
evidencematrix summary examples/basic
|
|
65
|
+
evidencematrix summary examples/basic --format json
|
|
66
|
+
```
|
|
67
|
+
|
|
68
|
+
`audit` returns exit code 1 for unresolved relationships in this example. The example contains gaps intentionally; `validate`, `build`, and `summary` succeed with exit code 0.
|
|
69
|
+
|
|
70
|
+
`build` writes `coverage_matrix.csv`, `coverage_report.json`, `gap_report.json`, `summary.json`, and `coverage_report.md`. The JSON reports use sorted keys and stable indentation; CSV rows sort by entity ID and source ID. Rebuilding identical input with the same tool version produces byte-identical files.
|
|
71
|
+
|
|
72
|
+
## Input model
|
|
73
|
+
|
|
74
|
+
A manifest has `version`, `entities`, `sources`, and `coverage` fields. IDs are unique strings. Each source declares its availability. Coverage entries are optional and identify one entity, one source, and one status; `reason` is an optional explanatory string for non-supported states.
|
|
75
|
+
|
|
76
|
+
```yaml
|
|
77
|
+
version: 1
|
|
78
|
+
|
|
79
|
+
entities:
|
|
80
|
+
- id: event-001
|
|
81
|
+
- id: event-002
|
|
82
|
+
|
|
83
|
+
sources:
|
|
84
|
+
- id: cwa
|
|
85
|
+
availability: available
|
|
86
|
+
- id: emic
|
|
87
|
+
availability: unavailable
|
|
88
|
+
|
|
89
|
+
coverage:
|
|
90
|
+
- entity: event-001
|
|
91
|
+
source: cwa
|
|
92
|
+
status: supported
|
|
93
|
+
- entity: event-002
|
|
94
|
+
source: cwa
|
|
95
|
+
status: mapping_gap
|
|
96
|
+
reason: no_verified_mapping
|
|
97
|
+
```
|
|
98
|
+
|
|
99
|
+
The input is deliberately strict: unknown fields, duplicate IDs or relationships, invalid references, duplicate YAML or JSON keys, and contradictory availability declarations fail validation. `PATH` may point to a `.yaml`, `.yml`, or `.json` file, or to a directory containing exactly one such manifest. No external file references are part of schema version 1.
|
|
100
|
+
|
|
101
|
+
### Availability and coverage status
|
|
102
|
+
|
|
103
|
+
Source availability and entity-source coverage describe related but separate facts. Availability accepts `available`, `unavailable`, `not_in_release`, and `unknown`. Coverage accepts:
|
|
104
|
+
|
|
105
|
+
| Status | Meaning |
|
|
106
|
+
| --- | --- |
|
|
107
|
+
| `supported` | The manifest declares evidence for this entity-source relationship. |
|
|
108
|
+
| `metadata_gap` | Required descriptive metadata is missing or unresolved. |
|
|
109
|
+
| `mapping_gap` | The source-to-entity relationship is not established. |
|
|
110
|
+
| `source_unavailable` | The source payload is declared unavailable. |
|
|
111
|
+
| `source_not_in_release` | The expected source is not included in the release being described. |
|
|
112
|
+
| `not_applicable` | The relationship is explicitly outside scope. |
|
|
113
|
+
| `unknown` | The relationship has not been assessed. |
|
|
114
|
+
|
|
115
|
+
Each entity is paired with every listed source. An explicit coverage row sets that pair's status. If no row exists, a source marked `unavailable` or `not_in_release` determines the corresponding relationship status; otherwise the relationship remains `unknown`. In particular, a missing relationship is never inferred to be a mapping gap. Explicit `not_applicable` relationships stay visible in the matrix and summary, but are excluded from unresolved audit findings.
|
|
116
|
+
|
|
117
|
+
`supported` is a manifest declaration. EvidenceMatrix checks that declaration's structure and consistency; it does not inspect or authenticate external evidence.
|
|
118
|
+
|
|
119
|
+
## Commands and exit codes
|
|
120
|
+
|
|
121
|
+
```text
|
|
122
|
+
evidencematrix validate PATH
|
|
123
|
+
evidencematrix build PATH [--output DIR]
|
|
124
|
+
evidencematrix audit PATH [--format text|json]
|
|
125
|
+
evidencematrix summary PATH [--format text|json]
|
|
126
|
+
```
|
|
127
|
+
|
|
128
|
+
`validate` checks input without modifying it. `build` creates deterministic reports. `audit` lists unresolved rows and returns 1 when it finds any; `not_applicable` rows are reported separately and do not fail the audit. `summary` prints counts, including all status categories, and supports machine-readable JSON. Commands are noninteractive; diagnostics go to stderr.
|
|
129
|
+
|
|
130
|
+
Exit codes are 0 for a valid command with no blocking finding, 1 for unresolved audit findings, and 2 for invalid input or execution errors.
|
|
131
|
+
|
|
132
|
+
## Development
|
|
133
|
+
|
|
134
|
+
```bash
|
|
135
|
+
uv sync --all-groups
|
|
136
|
+
uv run ruff check .
|
|
137
|
+
uv run ruff format --check .
|
|
138
|
+
uv run pytest
|
|
139
|
+
uv build
|
|
140
|
+
```
|
|
141
|
+
|
|
142
|
+
GitHub Actions runs lint and format checks, tests, package builds, and CLI smoke checks on Python 3.11, 3.12, and 3.13.
|
|
143
|
+
|
|
144
|
+
## Real-dataset dogfood
|
|
145
|
+
|
|
146
|
+
The public [TWDisaster dataset](https://github.com/KageRyo/TWDisaster) publishes positive event-source links but no expected-source eligibility matrix. The [dogfood assessment](examples/twdisaster/README.md) explains why converting absent links into gaps would invent facts and why the current release cannot provide a useful matrix of expected coverage.
|
|
147
|
+
|
|
148
|
+
## License
|
|
149
|
+
|
|
150
|
+
EvidenceMatrix is distributed under the [Apache License 2.0](LICENSE).
|
|
@@ -0,0 +1,14 @@
|
|
|
1
|
+
evidencematrix/__init__.py,sha256=AtnYsp46AK_xxwEE_1CsgwYnRz5N3cSiCJpSvstBdWo,526
|
|
2
|
+
evidencematrix/audit.py,sha256=wTASHvp8nXASwl7YApZAIvG-QjuaLbFs-sIunskJYik,775
|
|
3
|
+
evidencematrix/cli.py,sha256=GsVvT4f5odDZXsItW1GPB6Job23rkkCHU-aOh4sb4ps,3642
|
|
4
|
+
evidencematrix/matrix.py,sha256=nHv-6WyF_e-dFlbhRz8wLfNthdKA3yjdMVprsqhFyDM,2298
|
|
5
|
+
evidencematrix/model.py,sha256=4w1eSBvIMWCaWjRkFnkjVNyGKzOIYbqje_NyrlaP1-k,1942
|
|
6
|
+
evidencematrix/output.py,sha256=HcgcJBs0L2UNXdAwgG_1X6eh_xzME8RTtlCJ65XZyR8,5163
|
|
7
|
+
evidencematrix/parser.py,sha256=T9JYTXrUu5cOjsKAvIV_f9hUDhjpIbl3TQr7NK7i1AY,3228
|
|
8
|
+
evidencematrix/validation.py,sha256=ooyYNPSc6ZblnAN2QVx6JYeWVg7koJ8L24s3C_K4SKg,8293
|
|
9
|
+
evidencematrix-0.1.0.dist-info/licenses/LICENSE,sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ,11357
|
|
10
|
+
evidencematrix-0.1.0.dist-info/METADATA,sha256=5KFZOJ936RugsYqwrILBrPiLybbP00EvXUnivrYE-VM,8175
|
|
11
|
+
evidencematrix-0.1.0.dist-info/WHEEL,sha256=YVMoNqKzERt-wjUZwJ33xBGAwnFl-4cqbYkTtWa4itE,91
|
|
12
|
+
evidencematrix-0.1.0.dist-info/entry_points.txt,sha256=jHtrqg-Wv-iTrtDE0spqv0UQtHD_p0pRdVNYBQCxCTo,65
|
|
13
|
+
evidencematrix-0.1.0.dist-info/top_level.txt,sha256=cbjEpzTqsS6tvMw0KyFA-O9j9FyRLqhPwZpKTwM3t6U,15
|
|
14
|
+
evidencematrix-0.1.0.dist-info/RECORD,,
|
|
@@ -0,0 +1,201 @@
|
|
|
1
|
+
Apache License
|
|
2
|
+
Version 2.0, January 2004
|
|
3
|
+
http://www.apache.org/licenses/
|
|
4
|
+
|
|
5
|
+
TERMS AND CONDITIONS FOR USE, REPRODUCTION, AND DISTRIBUTION
|
|
6
|
+
|
|
7
|
+
1. Definitions.
|
|
8
|
+
|
|
9
|
+
"License" shall mean the terms and conditions for use, reproduction,
|
|
10
|
+
and distribution as defined by Sections 1 through 9 of this document.
|
|
11
|
+
|
|
12
|
+
"Licensor" shall mean the copyright owner or entity authorized by
|
|
13
|
+
the copyright owner that is granting the License.
|
|
14
|
+
|
|
15
|
+
"Legal Entity" shall mean the union of the acting entity and all
|
|
16
|
+
other entities that control, are controlled by, or are under common
|
|
17
|
+
control with that entity. For the purposes of this definition,
|
|
18
|
+
"control" means (i) the power, direct or indirect, to cause the
|
|
19
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