endoreg-db 0.8.6.1__py3-none-any.whl → 0.8.8.0__py3-none-any.whl
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- endoreg_db/authz/auth.py +74 -0
- endoreg_db/authz/backends.py +168 -0
- endoreg_db/authz/management/commands/list_routes.py +18 -0
- endoreg_db/authz/middleware.py +83 -0
- endoreg_db/authz/permissions.py +127 -0
- endoreg_db/authz/policy.py +218 -0
- endoreg_db/authz/views_auth.py +66 -0
- endoreg_db/config/env.py +13 -8
- endoreg_db/data/__init__.py +8 -31
- endoreg_db/data/_examples/disease.yaml +55 -0
- endoreg_db/data/_examples/disease_classification.yaml +13 -0
- endoreg_db/data/_examples/disease_classification_choice.yaml +62 -0
- endoreg_db/data/_examples/event.yaml +64 -0
- endoreg_db/data/_examples/examination.yaml +72 -0
- endoreg_db/data/_examples/finding/anatomy_colon.yaml +128 -0
- endoreg_db/data/_examples/finding/colonoscopy.yaml +40 -0
- endoreg_db/data/_examples/finding/colonoscopy_bowel_prep.yaml +56 -0
- endoreg_db/data/_examples/finding/complication.yaml +16 -0
- endoreg_db/data/_examples/finding/data.yaml +105 -0
- endoreg_db/data/_examples/finding/examination_setting.yaml +16 -0
- endoreg_db/data/_examples/finding/medication_related.yaml +18 -0
- endoreg_db/data/_examples/finding/outcome.yaml +12 -0
- endoreg_db/data/_examples/finding_classification/colonoscopy_bowel_preparation.yaml +68 -0
- endoreg_db/data/_examples/finding_classification/colonoscopy_jnet.yaml +22 -0
- endoreg_db/data/_examples/finding_classification/colonoscopy_kudo.yaml +25 -0
- endoreg_db/data/_examples/finding_classification/colonoscopy_lesion_circularity.yaml +20 -0
- endoreg_db/data/_examples/finding_classification/colonoscopy_lesion_planarity.yaml +24 -0
- endoreg_db/data/_examples/finding_classification/colonoscopy_lesion_size.yaml +68 -0
- endoreg_db/data/_examples/finding_classification/colonoscopy_lesion_surface.yaml +20 -0
- endoreg_db/data/_examples/finding_classification/colonoscopy_location.yaml +80 -0
- endoreg_db/data/_examples/finding_classification/colonoscopy_lst.yaml +21 -0
- endoreg_db/data/_examples/finding_classification/colonoscopy_nice.yaml +20 -0
- endoreg_db/data/_examples/finding_classification/colonoscopy_paris.yaml +26 -0
- endoreg_db/data/_examples/finding_classification/colonoscopy_sano.yaml +22 -0
- endoreg_db/data/_examples/finding_classification/colonoscopy_summary.yaml +53 -0
- endoreg_db/data/_examples/finding_classification/complication_generic.yaml +25 -0
- endoreg_db/data/_examples/finding_classification/examination_setting_generic.yaml +40 -0
- endoreg_db/data/_examples/finding_classification/histology_colo.yaml +51 -0
- endoreg_db/data/_examples/finding_classification/intervention_required.yaml +26 -0
- endoreg_db/data/_examples/finding_classification/medication_related.yaml +23 -0
- endoreg_db/data/_examples/finding_classification/visualized.yaml +33 -0
- endoreg_db/data/_examples/finding_classification_choice/bowel_preparation.yaml +78 -0
- endoreg_db/data/_examples/finding_classification_choice/colon_lesion_circularity_default.yaml +32 -0
- endoreg_db/data/_examples/finding_classification_choice/colon_lesion_jnet.yaml +15 -0
- endoreg_db/data/_examples/finding_classification_choice/colon_lesion_kudo.yaml +23 -0
- endoreg_db/data/_examples/finding_classification_choice/colon_lesion_lst.yaml +15 -0
- endoreg_db/data/_examples/finding_classification_choice/colon_lesion_nice.yaml +17 -0
- endoreg_db/data/_examples/finding_classification_choice/colon_lesion_paris.yaml +57 -0
- endoreg_db/data/_examples/finding_classification_choice/colon_lesion_planarity_default.yaml +49 -0
- endoreg_db/data/_examples/finding_classification_choice/colon_lesion_sano.yaml +14 -0
- endoreg_db/data/_examples/finding_classification_choice/colon_lesion_surface_intact_default.yaml +36 -0
- endoreg_db/data/_examples/finding_classification_choice/colonoscopy_location.yaml +229 -0
- endoreg_db/data/_examples/finding_classification_choice/colonoscopy_not_complete_reason.yaml +19 -0
- endoreg_db/data/_examples/finding_classification_choice/colonoscopy_size.yaml +82 -0
- endoreg_db/data/_examples/finding_classification_choice/colonoscopy_summary_worst_finding.yaml +15 -0
- endoreg_db/data/_examples/finding_classification_choice/complication_generic_types.yaml +15 -0
- endoreg_db/data/_examples/finding_classification_choice/examination_setting_generic_types.yaml +15 -0
- endoreg_db/data/_examples/finding_classification_choice/histology.yaml +24 -0
- endoreg_db/data/_examples/finding_classification_choice/histology_polyp.yaml +20 -0
- endoreg_db/data/_examples/finding_classification_choice/outcome.yaml +19 -0
- endoreg_db/data/_examples/finding_classification_choice/yes_no_na.yaml +11 -0
- endoreg_db/data/_examples/finding_classification_type/colonoscopy_basic.yaml +48 -0
- endoreg_db/data/_examples/finding_intervention/endoscopy.yaml +43 -0
- endoreg_db/data/_examples/finding_intervention/endoscopy_colonoscopy.yaml +168 -0
- endoreg_db/data/_examples/finding_intervention/endoscopy_egd.yaml +128 -0
- endoreg_db/data/_examples/finding_intervention/endoscopy_ercp.yaml +32 -0
- endoreg_db/data/_examples/finding_intervention/endoscopy_eus_lower.yaml +9 -0
- endoreg_db/data/_examples/finding_intervention/endoscopy_eus_upper.yaml +36 -0
- endoreg_db/data/_examples/finding_intervention_type/endoscopy.yaml +15 -0
- endoreg_db/data/_examples/finding_type/data.yaml +43 -0
- endoreg_db/data/_examples/requirement/age.yaml +26 -0
- endoreg_db/data/_examples/requirement/colonoscopy_baseline_austria.yaml +45 -0
- endoreg_db/data/_examples/requirement/disease_cardiovascular.yaml +79 -0
- endoreg_db/data/_examples/requirement/disease_classification_choice_cardiovascular.yaml +41 -0
- endoreg_db/data/_examples/requirement/disease_hepatology.yaml +12 -0
- endoreg_db/data/_examples/requirement/disease_misc.yaml +12 -0
- endoreg_db/data/_examples/requirement/disease_renal.yaml +96 -0
- endoreg_db/data/_examples/requirement/endoscopy_bleeding_risk.yaml +59 -0
- endoreg_db/data/_examples/requirement/event_cardiology.yaml +251 -0
- endoreg_db/data/_examples/requirement/event_requirements.yaml +145 -0
- endoreg_db/data/_examples/requirement/finding_colon_polyp.yaml +50 -0
- endoreg_db/data/_examples/requirement/gender.yaml +25 -0
- endoreg_db/data/_examples/requirement/lab_value.yaml +441 -0
- endoreg_db/data/_examples/requirement/medication.yaml +93 -0
- endoreg_db/data/_examples/requirement_operator/age.yaml +13 -0
- endoreg_db/data/_examples/requirement_operator/lab_operators.yaml +129 -0
- endoreg_db/data/_examples/requirement_operator/model_operators.yaml +96 -0
- endoreg_db/data/_examples/requirement_set/01_endoscopy_generic.yaml +48 -0
- endoreg_db/data/_examples/requirement_set/colonoscopy_austria_screening.yaml +57 -0
- endoreg_db/data/_examples/yaml_examples.xlsx +0 -0
- endoreg_db/data/ai_model_meta/default_multilabel_classification.yaml +4 -3
- endoreg_db/data/event_classification/data.yaml +4 -0
- endoreg_db/data/event_classification_choice/data.yaml +9 -0
- endoreg_db/data/finding_classification/colonoscopy_bowel_preparation.yaml +43 -70
- endoreg_db/data/finding_classification/colonoscopy_lesion_size.yaml +22 -52
- endoreg_db/data/finding_classification/colonoscopy_location.yaml +31 -62
- endoreg_db/data/finding_classification/histology_colo.yaml +28 -36
- endoreg_db/data/requirement/colon_polyp_intervention.yaml +49 -0
- endoreg_db/data/requirement/coloreg_colon_polyp.yaml +49 -0
- endoreg_db/data/requirement_set/01_endoscopy_generic.yaml +31 -12
- endoreg_db/data/requirement_set/01_laboratory.yaml +13 -0
- endoreg_db/data/requirement_set/02_endoscopy_bleeding_risk.yaml +46 -0
- endoreg_db/data/requirement_set/90_coloreg.yaml +178 -0
- endoreg_db/data/requirement_set/_old_ +109 -0
- endoreg_db/data/requirement_set_type/data.yaml +21 -0
- endoreg_db/data/setup_config.yaml +4 -4
- endoreg_db/data/tag/requirement_set_tags.yaml +21 -0
- endoreg_db/exceptions.py +5 -2
- endoreg_db/helpers/data_loader.py +1 -1
- endoreg_db/management/commands/create_model_meta_from_huggingface.py +21 -10
- endoreg_db/management/commands/create_multilabel_model_meta.py +299 -129
- endoreg_db/management/commands/import_video.py +9 -10
- endoreg_db/management/commands/import_video_with_classification.py +1 -1
- endoreg_db/management/commands/init_default_ai_model.py +1 -1
- endoreg_db/management/commands/list_routes.py +18 -0
- endoreg_db/management/commands/load_center_data.py +12 -12
- endoreg_db/management/commands/load_requirement_data.py +60 -31
- endoreg_db/management/commands/load_requirement_set_tags.py +95 -0
- endoreg_db/management/commands/setup_endoreg_db.py +3 -3
- endoreg_db/management/commands/storage_management.py +271 -203
- endoreg_db/migrations/0001_initial.py +1799 -1300
- endoreg_db/migrations/0002_requirementset_depends_on.py +18 -0
- endoreg_db/migrations/_old/0001_initial.py +1857 -0
- endoreg_db/migrations/_old/0004_employee_city_employee_post_code_employee_street_and_more.py +68 -0
- endoreg_db/migrations/_old/0004_remove_casetemplate_rules_and_more.py +77 -0
- endoreg_db/migrations/_old/0005_merge_20251111_1003.py +14 -0
- endoreg_db/migrations/_old/0006_sensitivemeta_anonymized_text_and_more.py +68 -0
- endoreg_db/migrations/_old/0007_remove_rule_attribute_dtype_remove_rule_rule_type_and_more.py +89 -0
- endoreg_db/migrations/_old/0008_remove_event_event_classification_and_more.py +27 -0
- endoreg_db/migrations/_old/0009_alter_modelmeta_options_and_more.py +21 -0
- endoreg_db/models/__init__.py +78 -123
- endoreg_db/models/administration/__init__.py +21 -42
- endoreg_db/models/administration/ai/active_model.py +2 -2
- endoreg_db/models/administration/ai/ai_model.py +7 -6
- endoreg_db/models/administration/case/__init__.py +1 -15
- endoreg_db/models/administration/case/case.py +3 -3
- endoreg_db/models/administration/case/case_template/__init__.py +2 -14
- endoreg_db/models/administration/case/case_template/case_template.py +2 -124
- endoreg_db/models/administration/case/case_template/case_template_rule.py +2 -268
- endoreg_db/models/administration/case/case_template/case_template_rule_value.py +2 -85
- endoreg_db/models/administration/case/case_template/case_template_type.py +2 -25
- endoreg_db/models/administration/center/center.py +33 -19
- endoreg_db/models/administration/center/center_product.py +12 -9
- endoreg_db/models/administration/center/center_resource.py +25 -19
- endoreg_db/models/administration/center/center_shift.py +21 -17
- endoreg_db/models/administration/center/center_waste.py +16 -8
- endoreg_db/models/administration/person/__init__.py +2 -0
- endoreg_db/models/administration/person/employee/employee.py +10 -5
- endoreg_db/models/administration/person/employee/employee_qualification.py +9 -4
- endoreg_db/models/administration/person/employee/employee_type.py +12 -6
- endoreg_db/models/administration/person/examiner/examiner.py +13 -11
- endoreg_db/models/administration/person/patient/__init__.py +2 -0
- endoreg_db/models/administration/person/patient/patient.py +103 -100
- endoreg_db/models/administration/person/patient/patient_external_id.py +37 -0
- endoreg_db/models/administration/person/person.py +4 -0
- endoreg_db/models/administration/person/profession/__init__.py +8 -4
- endoreg_db/models/administration/person/user/portal_user_information.py +11 -7
- endoreg_db/models/administration/product/product.py +20 -15
- endoreg_db/models/administration/product/product_material.py +17 -18
- endoreg_db/models/administration/product/product_weight.py +12 -8
- endoreg_db/models/administration/product/reference_product.py +23 -55
- endoreg_db/models/administration/qualification/qualification.py +7 -3
- endoreg_db/models/administration/qualification/qualification_type.py +7 -3
- endoreg_db/models/administration/shift/scheduled_days.py +8 -5
- endoreg_db/models/administration/shift/shift.py +16 -12
- endoreg_db/models/administration/shift/shift_type.py +23 -31
- endoreg_db/models/label/__init__.py +7 -8
- endoreg_db/models/label/annotation/image_classification.py +10 -9
- endoreg_db/models/label/annotation/video_segmentation_annotation.py +8 -5
- endoreg_db/models/label/label.py +15 -15
- endoreg_db/models/label/label_set.py +19 -6
- endoreg_db/models/label/label_type.py +1 -1
- endoreg_db/models/label/label_video_segment/_create_from_video.py +5 -8
- endoreg_db/models/label/label_video_segment/label_video_segment.py +76 -102
- endoreg_db/models/label/video_segmentation_label.py +4 -0
- endoreg_db/models/label/video_segmentation_labelset.py +4 -3
- endoreg_db/models/media/frame/frame.py +22 -22
- endoreg_db/models/media/pdf/raw_pdf.py +110 -182
- endoreg_db/models/media/pdf/report_file.py +25 -29
- endoreg_db/models/media/pdf/report_reader/report_reader_config.py +30 -46
- endoreg_db/models/media/pdf/report_reader/report_reader_flag.py +23 -7
- endoreg_db/models/media/video/__init__.py +1 -0
- endoreg_db/models/media/video/create_from_file.py +48 -56
- endoreg_db/models/media/video/pipe_2.py +8 -9
- endoreg_db/models/media/video/video_file.py +150 -108
- endoreg_db/models/media/video/video_file_ai.py +288 -74
- endoreg_db/models/media/video/video_file_anonymize.py +38 -38
- endoreg_db/models/media/video/video_file_frames/__init__.py +3 -1
- endoreg_db/models/media/video/video_file_frames/_bulk_create_frames.py +6 -8
- endoreg_db/models/media/video/video_file_frames/_create_frame_object.py +7 -9
- endoreg_db/models/media/video/video_file_frames/_delete_frames.py +9 -8
- endoreg_db/models/media/video/video_file_frames/_extract_frames.py +38 -45
- endoreg_db/models/media/video/video_file_frames/_get_frame.py +6 -8
- endoreg_db/models/media/video/video_file_frames/_get_frame_number.py +4 -18
- endoreg_db/models/media/video/video_file_frames/_get_frame_path.py +4 -3
- endoreg_db/models/media/video/video_file_frames/_get_frame_paths.py +7 -6
- endoreg_db/models/media/video/video_file_frames/_get_frame_range.py +6 -8
- endoreg_db/models/media/video/video_file_frames/_get_frames.py +6 -8
- endoreg_db/models/media/video/video_file_frames/_initialize_frames.py +15 -25
- endoreg_db/models/media/video/video_file_frames/_manage_frame_range.py +26 -23
- endoreg_db/models/media/video/video_file_frames/_mark_frames_extracted_status.py +23 -14
- endoreg_db/models/media/video/video_file_io.py +109 -62
- endoreg_db/models/media/video/video_file_meta/get_crop_template.py +3 -3
- endoreg_db/models/media/video/video_file_meta/get_endo_roi.py +5 -3
- endoreg_db/models/media/video/video_file_meta/get_fps.py +37 -34
- endoreg_db/models/media/video/video_file_meta/initialize_video_specs.py +19 -25
- endoreg_db/models/media/video/video_file_meta/text_meta.py +41 -38
- endoreg_db/models/media/video/video_file_meta/video_meta.py +14 -7
- endoreg_db/models/media/video/video_file_segments.py +24 -17
- endoreg_db/models/media/video/video_metadata.py +19 -35
- endoreg_db/models/media/video/video_processing.py +96 -95
- endoreg_db/models/medical/contraindication/__init__.py +13 -3
- endoreg_db/models/medical/disease.py +22 -16
- endoreg_db/models/medical/event.py +31 -18
- endoreg_db/models/medical/examination/__init__.py +13 -6
- endoreg_db/models/medical/examination/examination.py +17 -18
- endoreg_db/models/medical/examination/examination_indication.py +26 -25
- endoreg_db/models/medical/examination/examination_time.py +16 -6
- endoreg_db/models/medical/examination/examination_time_type.py +9 -6
- endoreg_db/models/medical/examination/examination_type.py +3 -4
- endoreg_db/models/medical/finding/finding.py +38 -39
- endoreg_db/models/medical/finding/finding_classification.py +37 -48
- endoreg_db/models/medical/finding/finding_intervention.py +27 -22
- endoreg_db/models/medical/finding/finding_type.py +13 -12
- endoreg_db/models/medical/hardware/endoscope.py +20 -26
- endoreg_db/models/medical/hardware/endoscopy_processor.py +2 -2
- endoreg_db/models/medical/laboratory/lab_value.py +62 -91
- endoreg_db/models/medical/medication/medication.py +22 -10
- endoreg_db/models/medical/medication/medication_indication.py +29 -3
- endoreg_db/models/medical/medication/medication_indication_type.py +25 -14
- endoreg_db/models/medical/medication/medication_intake_time.py +31 -19
- endoreg_db/models/medical/medication/medication_schedule.py +27 -16
- endoreg_db/models/medical/organ/__init__.py +15 -12
- endoreg_db/models/medical/patient/medication_examples.py +1 -5
- endoreg_db/models/medical/patient/patient_disease.py +20 -23
- endoreg_db/models/medical/patient/patient_event.py +19 -22
- endoreg_db/models/medical/patient/patient_examination.py +48 -54
- endoreg_db/models/medical/patient/patient_examination_indication.py +16 -14
- endoreg_db/models/medical/patient/patient_finding.py +122 -139
- endoreg_db/models/medical/patient/patient_finding_classification.py +44 -49
- endoreg_db/models/medical/patient/patient_finding_intervention.py +8 -19
- endoreg_db/models/medical/patient/patient_lab_sample.py +28 -23
- endoreg_db/models/medical/patient/patient_lab_value.py +82 -89
- endoreg_db/models/medical/patient/patient_medication.py +27 -38
- endoreg_db/models/medical/patient/patient_medication_schedule.py +28 -36
- endoreg_db/models/medical/risk/risk.py +7 -6
- endoreg_db/models/medical/risk/risk_type.py +8 -5
- endoreg_db/models/metadata/model_meta.py +60 -29
- endoreg_db/models/metadata/model_meta_logic.py +125 -18
- endoreg_db/models/metadata/pdf_meta.py +19 -24
- endoreg_db/models/metadata/sensitive_meta.py +102 -85
- endoreg_db/models/metadata/sensitive_meta_logic.py +192 -173
- endoreg_db/models/metadata/video_meta.py +51 -31
- endoreg_db/models/metadata/video_prediction_logic.py +16 -23
- endoreg_db/models/metadata/video_prediction_meta.py +29 -33
- endoreg_db/models/other/distribution/date_value_distribution.py +89 -29
- endoreg_db/models/other/distribution/multiple_categorical_value_distribution.py +21 -5
- endoreg_db/models/other/distribution/numeric_value_distribution.py +114 -53
- endoreg_db/models/other/distribution/single_categorical_value_distribution.py +4 -3
- endoreg_db/models/other/emission/emission_factor.py +18 -8
- endoreg_db/models/other/gender.py +10 -5
- endoreg_db/models/other/information_source.py +25 -25
- endoreg_db/models/other/material.py +9 -5
- endoreg_db/models/other/resource.py +6 -4
- endoreg_db/models/other/tag.py +10 -5
- endoreg_db/models/other/transport_route.py +13 -8
- endoreg_db/models/other/unit.py +10 -6
- endoreg_db/models/other/waste.py +6 -5
- endoreg_db/models/requirement/requirement.py +580 -272
- endoreg_db/models/requirement/requirement_error.py +85 -0
- endoreg_db/models/requirement/requirement_evaluation/evaluate_with_dependencies.py +268 -0
- endoreg_db/models/requirement/requirement_evaluation/operator_evaluation_models.py +3 -6
- endoreg_db/models/requirement/requirement_evaluation/requirement_type_parser.py +90 -64
- endoreg_db/models/requirement/requirement_operator.py +36 -33
- endoreg_db/models/requirement/requirement_set.py +74 -57
- endoreg_db/models/state/__init__.py +4 -4
- endoreg_db/models/state/abstract.py +2 -2
- endoreg_db/models/state/anonymization.py +12 -0
- endoreg_db/models/state/audit_ledger.py +46 -47
- endoreg_db/models/state/label_video_segment.py +9 -0
- endoreg_db/models/state/raw_pdf.py +40 -46
- endoreg_db/models/state/sensitive_meta.py +6 -2
- endoreg_db/models/state/video.py +58 -53
- endoreg_db/models/upload_job.py +32 -55
- endoreg_db/models/utils.py +1 -2
- endoreg_db/root_urls.py +21 -2
- endoreg_db/serializers/__init__.py +0 -2
- endoreg_db/serializers/anonymization.py +18 -10
- endoreg_db/serializers/meta/report_meta.py +1 -1
- endoreg_db/serializers/meta/sensitive_meta_detail.py +63 -118
- endoreg_db/serializers/misc/file_overview.py +11 -99
- endoreg_db/serializers/requirements/requirement_sets.py +92 -22
- endoreg_db/serializers/video/segmentation.py +2 -1
- endoreg_db/serializers/video/video_processing_history.py +20 -5
- endoreg_db/services/anonymization.py +75 -73
- endoreg_db/services/lookup_service.py +37 -24
- endoreg_db/services/pdf_import.py +166 -68
- endoreg_db/services/storage_aware_video_processor.py +140 -114
- endoreg_db/services/video_import.py +193 -283
- endoreg_db/urls/__init__.py +7 -20
- endoreg_db/urls/media.py +108 -67
- endoreg_db/urls/root_urls.py +29 -0
- endoreg_db/utils/__init__.py +15 -5
- endoreg_db/utils/ai/multilabel_classification_net.py +116 -20
- endoreg_db/utils/case_generator/__init__.py +3 -0
- endoreg_db/utils/dataloader.py +88 -16
- endoreg_db/utils/defaults/set_default_center.py +32 -0
- endoreg_db/utils/names.py +22 -16
- endoreg_db/utils/permissions.py +2 -1
- endoreg_db/utils/pipelines/process_video_dir.py +1 -1
- endoreg_db/utils/requirement_operator_logic/model_evaluators.py +414 -127
- endoreg_db/utils/setup_config.py +8 -5
- endoreg_db/utils/storage.py +115 -0
- endoreg_db/utils/validate_endo_roi.py +8 -2
- endoreg_db/utils/video/ffmpeg_wrapper.py +184 -188
- endoreg_db/views/__init__.py +0 -10
- endoreg_db/views/anonymization/media_management.py +198 -163
- endoreg_db/views/anonymization/overview.py +4 -1
- endoreg_db/views/anonymization/validate.py +174 -40
- endoreg_db/views/media/__init__.py +2 -0
- endoreg_db/views/media/pdf_media.py +131 -152
- endoreg_db/views/media/sensitive_metadata.py +46 -6
- endoreg_db/views/media/video_media.py +89 -82
- endoreg_db/views/media/video_segments.py +2 -3
- endoreg_db/views/meta/sensitive_meta_detail.py +0 -63
- endoreg_db/views/patient/patient.py +5 -4
- endoreg_db/views/pdf/pdf_stream.py +20 -21
- endoreg_db/views/pdf/reimport.py +11 -32
- endoreg_db/views/requirement/evaluate.py +188 -187
- endoreg_db/views/requirement/lookup.py +17 -3
- endoreg_db/views/requirement/requirement_utils.py +89 -0
- endoreg_db/views/video/__init__.py +0 -2
- endoreg_db/views/video/correction.py +2 -2
- {endoreg_db-0.8.6.1.dist-info → endoreg_db-0.8.8.0.dist-info}/METADATA +7 -3
- {endoreg_db-0.8.6.1.dist-info → endoreg_db-0.8.8.0.dist-info}/RECORD +341 -245
- endoreg_db/models/administration/permissions/__init__.py +0 -44
- endoreg_db/models/media/video/video_file_frames.py +0 -0
- endoreg_db/models/metadata/frame_ocr_result.py +0 -0
- endoreg_db/models/rule/__init__.py +0 -13
- endoreg_db/models/rule/rule.py +0 -27
- endoreg_db/models/rule/rule_applicator.py +0 -224
- endoreg_db/models/rule/rule_attribute_dtype.py +0 -17
- endoreg_db/models/rule/rule_type.py +0 -20
- endoreg_db/models/rule/ruleset.py +0 -17
- endoreg_db/serializers/video/video_metadata.py +0 -105
- endoreg_db/urls/report.py +0 -48
- endoreg_db/urls/video.py +0 -61
- endoreg_db/utils/case_generator/case_generator.py +0 -159
- endoreg_db/utils/case_generator/utils.py +0 -30
- endoreg_db/views/report/__init__.py +0 -9
- endoreg_db/views/report/report_list.py +0 -112
- endoreg_db/views/report/report_with_secure_url.py +0 -28
- endoreg_db/views/report/start_examination.py +0 -7
- endoreg_db/views.py +0 -0
- /endoreg_db/data/{requirement_set → _examples/requirement_set}/endoscopy_bleeding_risk.yaml +0 -0
- /endoreg_db/migrations/{0002_add_video_correction_models.py → _old/0002_add_video_correction_models.py} +0 -0
- /endoreg_db/migrations/{0003_add_center_display_name.py → _old/0003_add_center_display_name.py} +0 -0
- /endoreg_db/{models/media/video/refactor_plan.md → views/pdf/pdf_stream_views.py} +0 -0
- {endoreg_db-0.8.6.1.dist-info → endoreg_db-0.8.8.0.dist-info}/WHEEL +0 -0
- {endoreg_db-0.8.6.1.dist-info → endoreg_db-0.8.8.0.dist-info}/licenses/LICENSE +0 -0
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# Generated by Django 5.2.7 on 2025-11-16 16:55
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import uuid
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("codec_name", models.CharField(blank=True, max_length=50, null=True)),
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+
("pixel_format", models.CharField(blank=True, max_length=50, null=True)),
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+
("bit_rate", models.BigIntegerField(blank=True, null=True)),
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("raw_probe_data", models.JSONField(blank=True, null=True)),
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195
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],
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),
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197
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migrations.CreateModel(
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name=
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164
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+
name="FindingClassificationChoice",
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199
165
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fields=[
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(
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(
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(
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(
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(
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-
(
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(
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(
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+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
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+
("name", models.CharField(max_length=255, unique=True)),
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("name_de", models.CharField(max_length=255, null=True, unique=True)),
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("name_en", models.CharField(max_length=255, null=True, unique=True)),
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("description", models.TextField(blank=True)),
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("description_de", models.TextField(blank=True, null=True)),
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("description_en", models.TextField(blank=True, null=True)),
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("subcategories", models.JSONField(default=dict)),
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("numerical_descriptors", models.JSONField(default=dict)),
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],
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),
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211
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migrations.CreateModel(
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name=
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+
name="FindingClassificationType",
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fields=[
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(
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(
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(
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+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
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+
("name", models.CharField(max_length=255, unique=True)),
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("description", models.TextField(blank=True)),
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],
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),
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migrations.CreateModel(
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name=
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186
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+
name="FindingInterventionType",
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fields=[
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(
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(
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(
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|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
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|
+
("name", models.CharField(max_length=100, unique=True)),
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+
("description", models.TextField(blank=True, null=True)),
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225
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|
],
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),
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migrations.CreateModel(
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name=
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+
name="FindingType",
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|
fields=[
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(
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(
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(
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+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
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|
+
("name", models.CharField(max_length=100, unique=True)),
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+
("description", models.TextField(blank=True, null=True)),
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],
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|
),
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migrations.CreateModel(
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name=
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202
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+
name="FirstName",
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|
fields=[
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|
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(
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(
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|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
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|
+
("name", models.CharField(max_length=255, unique=True)),
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240
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|
],
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|
),
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migrations.CreateModel(
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name=
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+
name="Gender",
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|
fields=[
|
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|
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(
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-
(
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(
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|
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(
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|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
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212
|
+
("name", models.CharField(max_length=255)),
|
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|
+
("abbreviation", models.CharField(max_length=255, null=True)),
|
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214
|
+
("description", models.TextField(blank=True, null=True)),
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249
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|
],
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|
),
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|
migrations.CreateModel(
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name=
|
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+
name="Label",
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253
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|
fields=[
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|
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(
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255
|
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(
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256
|
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(
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220
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
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221
|
+
("name", models.CharField(max_length=255)),
|
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222
|
+
("description", models.TextField(blank=True, null=True)),
|
|
257
223
|
],
|
|
258
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|
),
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|
migrations.CreateModel(
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|
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name=
|
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226
|
+
name="LabelType",
|
|
261
227
|
fields=[
|
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|
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(
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263
|
-
(
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264
|
-
(
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228
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
229
|
+
("name", models.CharField(max_length=255)),
|
|
230
|
+
("description", models.TextField(blank=True, null=True)),
|
|
265
231
|
],
|
|
266
232
|
),
|
|
267
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|
migrations.CreateModel(
|
|
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|
-
name=
|
|
234
|
+
name="LastName",
|
|
269
235
|
fields=[
|
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|
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(
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271
|
-
(
|
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236
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
237
|
+
("name", models.CharField(max_length=255, unique=True)),
|
|
272
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|
],
|
|
273
239
|
),
|
|
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|
migrations.CreateModel(
|
|
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|
-
name=
|
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241
|
+
name="Medication",
|
|
276
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|
fields=[
|
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|
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(
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(
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(
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(
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(
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|
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(
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|
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(
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|
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(
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243
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
244
|
+
("name", models.CharField(max_length=255, unique=True)),
|
|
245
|
+
("adapt_to_renal_function", models.BooleanField(default=False)),
|
|
246
|
+
("adapt_to_hepatic_function", models.BooleanField(default=False)),
|
|
247
|
+
("adapt_to_indication", models.BooleanField(default=False)),
|
|
248
|
+
("adapt_to_age", models.BooleanField(default=False)),
|
|
249
|
+
("adapt_to_weight", models.BooleanField(default=False)),
|
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250
|
+
("adapt_to_risk", models.BooleanField(default=False)),
|
|
285
251
|
],
|
|
286
252
|
),
|
|
287
253
|
migrations.CreateModel(
|
|
288
|
-
name=
|
|
254
|
+
name="MedicationIndicationType",
|
|
289
255
|
fields=[
|
|
290
|
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(
|
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291
|
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(
|
|
256
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
257
|
+
("name", models.CharField(max_length=255, unique=True)),
|
|
292
258
|
],
|
|
293
259
|
),
|
|
294
260
|
migrations.CreateModel(
|
|
295
|
-
name=
|
|
261
|
+
name="MedicationIntakeTime",
|
|
296
262
|
fields=[
|
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297
|
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(
|
|
298
|
-
(
|
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299
|
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(
|
|
300
|
-
(
|
|
263
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
264
|
+
("name", models.CharField(max_length=255, unique=True)),
|
|
265
|
+
("repeats", models.CharField(default="daily", max_length=20)),
|
|
266
|
+
("time", models.TimeField()),
|
|
301
267
|
],
|
|
302
268
|
),
|
|
303
269
|
migrations.CreateModel(
|
|
304
|
-
name=
|
|
270
|
+
name="ModelType",
|
|
305
271
|
fields=[
|
|
306
|
-
(
|
|
307
|
-
(
|
|
308
|
-
(
|
|
272
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
273
|
+
("name", models.CharField(max_length=255)),
|
|
274
|
+
("description", models.TextField(blank=True, null=True)),
|
|
309
275
|
],
|
|
310
276
|
),
|
|
311
277
|
migrations.CreateModel(
|
|
312
|
-
name=
|
|
278
|
+
name="MultipleCategoricalValueDistribution",
|
|
313
279
|
fields=[
|
|
314
|
-
(
|
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315
|
-
(
|
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|
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(
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317
|
-
(
|
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318
|
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(
|
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319
|
-
(
|
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320
|
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(
|
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321
|
-
(
|
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280
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
281
|
+
("name", models.CharField(max_length=100)),
|
|
282
|
+
("categories", models.JSONField()),
|
|
283
|
+
("min_count", models.IntegerField()),
|
|
284
|
+
("max_count", models.IntegerField()),
|
|
285
|
+
("count_distribution_type", models.CharField(choices=[("uniform", "Uniform"), ("normal", "Normal")], max_length=20)),
|
|
286
|
+
("count_mean", models.FloatField(blank=True, null=True)),
|
|
287
|
+
("count_std_dev", models.FloatField(blank=True, null=True)),
|
|
322
288
|
],
|
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323
289
|
options={
|
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324
|
-
|
|
290
|
+
"abstract": False,
|
|
325
291
|
},
|
|
326
292
|
),
|
|
327
293
|
migrations.CreateModel(
|
|
328
|
-
name=
|
|
294
|
+
name="NumericValueDistribution",
|
|
329
295
|
fields=[
|
|
330
|
-
(
|
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331
|
-
(
|
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332
|
-
(
|
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333
|
-
|
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334
|
-
|
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296
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
297
|
+
("name", models.CharField(max_length=100)),
|
|
298
|
+
(
|
|
299
|
+
"distribution_type",
|
|
300
|
+
models.CharField(choices=[("uniform", "Uniform"), ("normal", "Normal"), ("skewed_normal", "Skewed Normal")], max_length=20),
|
|
301
|
+
),
|
|
302
|
+
("min_descriptor", models.CharField(max_length=20)),
|
|
303
|
+
("max_descriptor", models.CharField(max_length=20)),
|
|
304
|
+
("min_value", models.FloatField(blank=True, help_text="Lower hard limit for generated values", null=True)),
|
|
305
|
+
("max_value", models.FloatField(blank=True, help_text="Upper hard limit for generated values", null=True)),
|
|
306
|
+
("mean", models.FloatField(blank=True, help_text="Mean used for normal or skewed normal distributions", null=True)),
|
|
307
|
+
("std_dev", models.FloatField(blank=True, help_text="Standard deviation for bell-shaped distributions", null=True)),
|
|
308
|
+
("skewness", models.FloatField(blank=True, help_text="Shape parameter for skewed normal distributions", null=True)),
|
|
335
309
|
],
|
|
336
310
|
options={
|
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337
|
-
|
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311
|
+
"abstract": False,
|
|
338
312
|
},
|
|
339
313
|
),
|
|
340
314
|
migrations.CreateModel(
|
|
341
|
-
name=
|
|
342
|
-
fields=[
|
|
343
|
-
('id', models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name='ID')),
|
|
344
|
-
('name', models.CharField(max_length=255)),
|
|
345
|
-
('description', models.TextField(blank=True, null=True)),
|
|
346
|
-
],
|
|
347
|
-
),
|
|
348
|
-
migrations.CreateModel(
|
|
349
|
-
name='PdfType',
|
|
315
|
+
name="Organ",
|
|
350
316
|
fields=[
|
|
351
|
-
(
|
|
352
|
-
(
|
|
317
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
318
|
+
("name", models.CharField(max_length=100, unique=True)),
|
|
319
|
+
("description", models.TextField(blank=True, null=True)),
|
|
353
320
|
],
|
|
354
321
|
),
|
|
355
322
|
migrations.CreateModel(
|
|
356
|
-
name=
|
|
323
|
+
name="PatientLabSampleType",
|
|
357
324
|
fields=[
|
|
358
|
-
(
|
|
359
|
-
(
|
|
325
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
326
|
+
("name", models.CharField(max_length=255)),
|
|
327
|
+
("description", models.TextField(blank=True, null=True)),
|
|
360
328
|
],
|
|
361
329
|
),
|
|
362
330
|
migrations.CreateModel(
|
|
363
|
-
name=
|
|
331
|
+
name="PdfType",
|
|
364
332
|
fields=[
|
|
365
|
-
(
|
|
366
|
-
(
|
|
333
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
334
|
+
("name", models.CharField(max_length=255)),
|
|
367
335
|
],
|
|
368
336
|
),
|
|
369
337
|
migrations.CreateModel(
|
|
370
|
-
name=
|
|
338
|
+
name="Product",
|
|
371
339
|
fields=[
|
|
372
|
-
(
|
|
373
|
-
(
|
|
374
|
-
('description', models.TextField(blank=True, null=True)),
|
|
340
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
341
|
+
("name", models.CharField(max_length=255)),
|
|
375
342
|
],
|
|
376
343
|
),
|
|
377
344
|
migrations.CreateModel(
|
|
378
|
-
name=
|
|
345
|
+
name="ProductGroup",
|
|
379
346
|
fields=[
|
|
380
|
-
(
|
|
381
|
-
(
|
|
382
|
-
('description', models.TextField(blank=True, null=True)),
|
|
383
|
-
('is_active', models.BooleanField(default=True)),
|
|
347
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
348
|
+
("name", models.CharField(max_length=255)),
|
|
384
349
|
],
|
|
385
350
|
),
|
|
386
351
|
migrations.CreateModel(
|
|
387
|
-
name=
|
|
352
|
+
name="Profession",
|
|
388
353
|
fields=[
|
|
389
|
-
(
|
|
390
|
-
(
|
|
391
|
-
(
|
|
392
|
-
('is_active', models.BooleanField(default=True)),
|
|
354
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
355
|
+
("name", models.CharField(max_length=100)),
|
|
356
|
+
("description", models.TextField(blank=True, null=True)),
|
|
393
357
|
],
|
|
394
358
|
),
|
|
395
359
|
migrations.CreateModel(
|
|
396
|
-
name=
|
|
360
|
+
name="Qualification",
|
|
397
361
|
fields=[
|
|
398
|
-
(
|
|
399
|
-
(
|
|
400
|
-
(
|
|
401
|
-
(
|
|
402
|
-
('anonymized', models.BooleanField(default=False, help_text='True if the anonymized video file has been created.')),
|
|
403
|
-
('anonymization_validated', models.BooleanField(default=False, help_text='True if the anonymization process has been validated and confirmed.')),
|
|
404
|
-
('processing_started', models.BooleanField(default=False, help_text='True if the processing has started, but not yet completed.')),
|
|
405
|
-
('processing_error', models.BooleanField(default=False, help_text='True if an error occurred during processing.')),
|
|
406
|
-
('date_created', models.DateTimeField(auto_now_add=True)),
|
|
407
|
-
('date_modified', models.DateTimeField(auto_now=True)),
|
|
408
|
-
('was_created', models.BooleanField(default=True, help_text='True if this state was created for the first time.')),
|
|
409
|
-
('pdf_meta_extracted', models.BooleanField(default=False, help_text='True if PDF metadata has been extracted.')),
|
|
362
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
363
|
+
("name", models.CharField(max_length=255, unique=True)),
|
|
364
|
+
("description", models.TextField(blank=True, null=True)),
|
|
365
|
+
("is_active", models.BooleanField(default=True)),
|
|
410
366
|
],
|
|
411
|
-
options={
|
|
412
|
-
'verbose_name': 'Raw PDF Processing State',
|
|
413
|
-
'verbose_name_plural': 'Raw PDF Processing States',
|
|
414
|
-
},
|
|
415
367
|
),
|
|
416
368
|
migrations.CreateModel(
|
|
417
|
-
name=
|
|
369
|
+
name="QualificationType",
|
|
418
370
|
fields=[
|
|
419
|
-
(
|
|
420
|
-
(
|
|
421
|
-
(
|
|
371
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
372
|
+
("name", models.CharField(max_length=255, unique=True)),
|
|
373
|
+
("description", models.TextField(blank=True, null=True)),
|
|
374
|
+
("is_active", models.BooleanField(default=True)),
|
|
422
375
|
],
|
|
423
376
|
),
|
|
424
377
|
migrations.CreateModel(
|
|
425
|
-
name=
|
|
378
|
+
name="RawPdfState",
|
|
426
379
|
fields=[
|
|
427
|
-
(
|
|
428
|
-
(
|
|
429
|
-
(
|
|
430
|
-
(
|
|
380
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
381
|
+
("text_meta_extracted", models.BooleanField(default=False, help_text="True if text metadata (OCR) has been extracted.")),
|
|
382
|
+
("initial_prediction_completed", models.BooleanField(default=False, help_text="True if initial AI prediction has run.")),
|
|
383
|
+
(
|
|
384
|
+
"sensitive_meta_processed",
|
|
385
|
+
models.BooleanField(default=False, help_text="True if the video has been fully processed, meaning a anonymized person was created."),
|
|
386
|
+
),
|
|
387
|
+
("anonymized", models.BooleanField(default=False, help_text="True if the anonymized video file has been created.")),
|
|
388
|
+
(
|
|
389
|
+
"anonymization_validated",
|
|
390
|
+
models.BooleanField(default=False, help_text="True if the anonymization process has been validated and confirmed."),
|
|
391
|
+
),
|
|
392
|
+
("processing_started", models.BooleanField(default=False, help_text="True if the processing has started, but not yet completed.")),
|
|
393
|
+
("processing_error", models.BooleanField(default=False, help_text="True if an error occurred during processing.")),
|
|
394
|
+
("date_created", models.DateTimeField(auto_now_add=True)),
|
|
395
|
+
("date_modified", models.DateTimeField(auto_now=True)),
|
|
396
|
+
("was_created", models.BooleanField(default=True, help_text="True if this state was created for the first time.")),
|
|
397
|
+
("pdf_meta_extracted", models.BooleanField(default=False, help_text="True if PDF metadata has been extracted.")),
|
|
431
398
|
],
|
|
399
|
+
options={
|
|
400
|
+
"verbose_name": "Raw PDF Processing State",
|
|
401
|
+
"verbose_name_plural": "Raw PDF Processing States",
|
|
402
|
+
},
|
|
432
403
|
),
|
|
433
404
|
migrations.CreateModel(
|
|
434
|
-
name=
|
|
405
|
+
name="ReportReaderFlag",
|
|
435
406
|
fields=[
|
|
436
|
-
(
|
|
437
|
-
(
|
|
438
|
-
(
|
|
407
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
408
|
+
("name", models.CharField(max_length=255, unique=True)),
|
|
409
|
+
("value", models.CharField(max_length=255)),
|
|
439
410
|
],
|
|
440
411
|
),
|
|
441
412
|
migrations.CreateModel(
|
|
442
|
-
name=
|
|
413
|
+
name="RequirementOperator",
|
|
443
414
|
fields=[
|
|
444
|
-
(
|
|
445
|
-
(
|
|
446
|
-
(
|
|
415
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
416
|
+
("name", models.CharField(max_length=100, unique=True)),
|
|
417
|
+
("description", models.TextField(blank=True, null=True)),
|
|
418
|
+
("evaluation_function_name", models.CharField(blank=True, max_length=255, null=True)),
|
|
447
419
|
],
|
|
448
420
|
),
|
|
449
421
|
migrations.CreateModel(
|
|
450
|
-
name=
|
|
422
|
+
name="RequirementSetType",
|
|
451
423
|
fields=[
|
|
452
|
-
(
|
|
453
|
-
(
|
|
424
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
425
|
+
("name", models.CharField(max_length=100, unique=True)),
|
|
426
|
+
("description", models.TextField(blank=True, null=True)),
|
|
454
427
|
],
|
|
455
428
|
),
|
|
456
429
|
migrations.CreateModel(
|
|
457
|
-
name=
|
|
430
|
+
name="RequirementType",
|
|
458
431
|
fields=[
|
|
459
|
-
(
|
|
460
|
-
(
|
|
461
|
-
(
|
|
432
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
433
|
+
("name", models.CharField(max_length=100, unique=True)),
|
|
434
|
+
("description", models.TextField(blank=True, null=True)),
|
|
462
435
|
],
|
|
463
436
|
),
|
|
464
437
|
migrations.CreateModel(
|
|
465
|
-
name=
|
|
438
|
+
name="Resource",
|
|
466
439
|
fields=[
|
|
467
|
-
(
|
|
468
|
-
(
|
|
440
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
441
|
+
("name", models.CharField(max_length=255)),
|
|
469
442
|
],
|
|
470
443
|
),
|
|
471
444
|
migrations.CreateModel(
|
|
472
|
-
name=
|
|
445
|
+
name="RiskType",
|
|
473
446
|
fields=[
|
|
474
|
-
(
|
|
475
|
-
(
|
|
447
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
448
|
+
("name", models.CharField(max_length=100, unique=True)),
|
|
449
|
+
("description", models.TextField(blank=True, null=True)),
|
|
476
450
|
],
|
|
477
|
-
options={
|
|
478
|
-
'verbose_name': 'Rule Type',
|
|
479
|
-
'verbose_name_plural': 'Rule Types',
|
|
480
|
-
},
|
|
481
451
|
),
|
|
482
452
|
migrations.CreateModel(
|
|
483
|
-
name=
|
|
453
|
+
name="ScheduledDays",
|
|
484
454
|
fields=[
|
|
485
|
-
(
|
|
486
|
-
(
|
|
487
|
-
(
|
|
488
|
-
(
|
|
489
|
-
(
|
|
490
|
-
(
|
|
491
|
-
(
|
|
455
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
456
|
+
("name", models.CharField(help_text="Name of the scheduled days.", max_length=255, unique=True)),
|
|
457
|
+
("working_days", models.BooleanField(blank=True, default=True, null=True)),
|
|
458
|
+
("non_working_days", models.BooleanField(blank=True, default=False, null=True)),
|
|
459
|
+
("limited_time", models.BooleanField(blank=True, default=False, null=True)),
|
|
460
|
+
("start_date", models.DateField(blank=True, null=True)),
|
|
461
|
+
("end_date", models.DateField(blank=True, null=True)),
|
|
492
462
|
],
|
|
493
463
|
),
|
|
494
464
|
migrations.CreateModel(
|
|
495
|
-
name=
|
|
465
|
+
name="ShiftType",
|
|
496
466
|
fields=[
|
|
497
|
-
(
|
|
498
|
-
(
|
|
499
|
-
(
|
|
500
|
-
(
|
|
467
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
468
|
+
("name", models.CharField(max_length=255, unique=True)),
|
|
469
|
+
("description", models.TextField(blank=True, null=True)),
|
|
470
|
+
("is_active", models.BooleanField(default=True)),
|
|
501
471
|
],
|
|
502
472
|
),
|
|
503
473
|
migrations.CreateModel(
|
|
504
|
-
name=
|
|
474
|
+
name="SingleCategoricalValueDistribution",
|
|
505
475
|
fields=[
|
|
506
|
-
(
|
|
507
|
-
(
|
|
508
|
-
(
|
|
476
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
477
|
+
("name", models.CharField(max_length=100)),
|
|
478
|
+
("categories", models.JSONField()),
|
|
509
479
|
],
|
|
510
480
|
options={
|
|
511
|
-
|
|
481
|
+
"abstract": False,
|
|
512
482
|
},
|
|
513
483
|
),
|
|
514
484
|
migrations.CreateModel(
|
|
515
|
-
name=
|
|
485
|
+
name="Tag",
|
|
516
486
|
fields=[
|
|
517
|
-
(
|
|
518
|
-
(
|
|
487
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
488
|
+
("name", models.CharField(max_length=100, unique=True)),
|
|
519
489
|
],
|
|
520
490
|
options={
|
|
521
|
-
|
|
522
|
-
|
|
491
|
+
"verbose_name": "Tag",
|
|
492
|
+
"verbose_name_plural": "Tags",
|
|
523
493
|
},
|
|
524
494
|
),
|
|
525
495
|
migrations.CreateModel(
|
|
526
|
-
name=
|
|
496
|
+
name="Unit",
|
|
527
497
|
fields=[
|
|
528
|
-
(
|
|
529
|
-
(
|
|
530
|
-
(
|
|
531
|
-
(
|
|
498
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
499
|
+
("name", models.CharField(max_length=100)),
|
|
500
|
+
("description", models.CharField(blank=True, max_length=100, null=True)),
|
|
501
|
+
("abbreviation", models.CharField(blank=True, max_length=25, null=True)),
|
|
532
502
|
],
|
|
533
503
|
),
|
|
534
504
|
migrations.CreateModel(
|
|
535
|
-
name=
|
|
505
|
+
name="VideoImportMeta",
|
|
536
506
|
fields=[
|
|
537
|
-
(
|
|
538
|
-
(
|
|
539
|
-
(
|
|
540
|
-
(
|
|
541
|
-
(
|
|
542
|
-
(
|
|
543
|
-
(
|
|
507
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
508
|
+
("file_name", models.CharField(blank=True, max_length=255, null=True)),
|
|
509
|
+
("video_anonymized", models.BooleanField(default=False)),
|
|
510
|
+
("video_patient_data_detected", models.BooleanField(default=False)),
|
|
511
|
+
("outside_detected", models.BooleanField(default=False)),
|
|
512
|
+
("patient_data_removed", models.BooleanField(default=False)),
|
|
513
|
+
("outside_removed", models.BooleanField(default=False)),
|
|
544
514
|
],
|
|
545
515
|
),
|
|
546
516
|
migrations.CreateModel(
|
|
547
|
-
name=
|
|
517
|
+
name="VideoSegmentationLabel",
|
|
548
518
|
fields=[
|
|
549
|
-
(
|
|
550
|
-
(
|
|
551
|
-
(
|
|
552
|
-
(
|
|
553
|
-
(
|
|
519
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
520
|
+
("name", models.CharField(max_length=255)),
|
|
521
|
+
("description", models.TextField(blank=True, null=True)),
|
|
522
|
+
("color", models.CharField(blank=True, max_length=255, null=True)),
|
|
523
|
+
("order_priority", models.IntegerField(default=0)),
|
|
554
524
|
],
|
|
555
525
|
),
|
|
556
526
|
migrations.CreateModel(
|
|
557
|
-
name=
|
|
527
|
+
name="VideoState",
|
|
558
528
|
fields=[
|
|
559
|
-
(
|
|
560
|
-
(
|
|
561
|
-
(
|
|
562
|
-
(
|
|
563
|
-
(
|
|
564
|
-
(
|
|
565
|
-
(
|
|
566
|
-
(
|
|
567
|
-
(
|
|
568
|
-
|
|
569
|
-
|
|
570
|
-
|
|
571
|
-
(
|
|
572
|
-
|
|
573
|
-
|
|
574
|
-
|
|
575
|
-
(
|
|
576
|
-
(
|
|
529
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
530
|
+
("frames_extracted", models.BooleanField(default=False, help_text="True if raw frames have been extracted to files.")),
|
|
531
|
+
("frames_initialized", models.BooleanField(default=False, help_text="True if Frame DB objects have been created.")),
|
|
532
|
+
("frame_count", models.PositiveIntegerField(blank=True, help_text="Number of frames extracted/initialized.", null=True)),
|
|
533
|
+
("video_meta_extracted", models.BooleanField(default=False, help_text="True if VideoMeta (technical specs) has been extracted.")),
|
|
534
|
+
("text_meta_extracted", models.BooleanField(default=False, help_text="True if text metadata (OCR) has been extracted.")),
|
|
535
|
+
("initial_prediction_completed", models.BooleanField(default=False, help_text="True if initial AI prediction has run.")),
|
|
536
|
+
("lvs_created", models.BooleanField(default=False, help_text="True if LabelVideoSegments have been created from predictions.")),
|
|
537
|
+
(
|
|
538
|
+
"frame_annotations_generated",
|
|
539
|
+
models.BooleanField(default=False, help_text="True if frame-level annotations have been generated from segments."),
|
|
540
|
+
),
|
|
541
|
+
(
|
|
542
|
+
"sensitive_meta_processed",
|
|
543
|
+
models.BooleanField(default=False, help_text="True if the video has been fully processed, meaning a anonymized person was created."),
|
|
544
|
+
),
|
|
545
|
+
("anonymized", models.BooleanField(default=False, help_text="True if the anonymized video file has been created.")),
|
|
546
|
+
(
|
|
547
|
+
"anonymization_validated",
|
|
548
|
+
models.BooleanField(default=False, help_text="True if the anonymization process has been validated and confirmed."),
|
|
549
|
+
),
|
|
550
|
+
("processing_started", models.BooleanField(default=False, help_text="True if the processing has started, but not yet completed.")),
|
|
551
|
+
("date_created", models.DateTimeField(auto_now_add=True)),
|
|
552
|
+
("date_modified", models.DateTimeField(auto_now=True)),
|
|
553
|
+
(
|
|
554
|
+
"segment_annotations_created",
|
|
555
|
+
models.BooleanField(default=False, help_text="True if segment annotations have been created from LabelVideoSegments."),
|
|
556
|
+
),
|
|
557
|
+
("segment_annotations_validated", models.BooleanField(default=False, help_text="True if segment annotations have been validated.")),
|
|
558
|
+
("was_created", models.BooleanField(default=True, help_text="True if this state was created for the first time.")),
|
|
577
559
|
],
|
|
578
560
|
options={
|
|
579
|
-
|
|
580
|
-
|
|
561
|
+
"verbose_name": "Video Processing State",
|
|
562
|
+
"verbose_name_plural": "Video Processing States",
|
|
581
563
|
},
|
|
582
564
|
),
|
|
583
565
|
migrations.CreateModel(
|
|
584
|
-
name=
|
|
566
|
+
name="Waste",
|
|
585
567
|
fields=[
|
|
586
|
-
(
|
|
587
|
-
(
|
|
568
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
569
|
+
("name", models.CharField(max_length=255)),
|
|
588
570
|
],
|
|
589
571
|
),
|
|
590
572
|
migrations.CreateModel(
|
|
591
|
-
name=
|
|
573
|
+
name="DiseaseClassification",
|
|
592
574
|
fields=[
|
|
593
|
-
(
|
|
594
|
-
(
|
|
595
|
-
(
|
|
596
|
-
('parent_model', models.CharField(blank=True, max_length=255, null=True)),
|
|
597
|
-
('parent_field', models.CharField(blank=True, max_length=255, null=True)),
|
|
598
|
-
('target_field', models.CharField(blank=True, max_length=255, null=True)),
|
|
599
|
-
('target_model', models.CharField(blank=True, max_length=255, null=True)),
|
|
600
|
-
('rule_values', models.JSONField(blank=True, null=True)),
|
|
601
|
-
('extra_parameters', models.JSONField(blank=True, null=True)),
|
|
602
|
-
('chained_rules', models.ManyToManyField(related_name='calling_rules', to='endoreg_db.casetemplaterule')),
|
|
603
|
-
('rule_type', models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, to='endoreg_db.casetemplateruletype')),
|
|
604
|
-
('value_type', models.ForeignKey(null=True, on_delete=django.db.models.deletion.SET_NULL, to='endoreg_db.casetemplaterulevaluetype')),
|
|
605
|
-
('date_value_distribution', models.ForeignKey(null=True, on_delete=django.db.models.deletion.SET_NULL, to='endoreg_db.datevaluedistribution')),
|
|
606
|
-
('multiple_categorical_value_distribution', models.ForeignKey(null=True, on_delete=django.db.models.deletion.SET_NULL, to='endoreg_db.multiplecategoricalvaluedistribution')),
|
|
607
|
-
('numerical_value_distribution', models.ForeignKey(null=True, on_delete=django.db.models.deletion.SET_NULL, to='endoreg_db.numericvaluedistribution')),
|
|
608
|
-
('single_categorical_value_distribution', models.ForeignKey(null=True, on_delete=django.db.models.deletion.SET_NULL, to='endoreg_db.singlecategoricalvaluedistribution')),
|
|
575
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
576
|
+
("name", models.CharField(max_length=255, unique=True)),
|
|
577
|
+
("disease", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name="disease_classifications", to="endoreg_db.disease")),
|
|
609
578
|
],
|
|
610
579
|
),
|
|
611
580
|
migrations.CreateModel(
|
|
612
|
-
name=
|
|
581
|
+
name="DiseaseClassificationChoice",
|
|
613
582
|
fields=[
|
|
614
|
-
(
|
|
615
|
-
(
|
|
616
|
-
(
|
|
617
|
-
|
|
618
|
-
|
|
619
|
-
|
|
583
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
584
|
+
("name", models.CharField(max_length=255, unique=True)),
|
|
585
|
+
(
|
|
586
|
+
"disease_classification",
|
|
587
|
+
models.ForeignKey(
|
|
588
|
+
on_delete=django.db.models.deletion.CASCADE, related_name="disease_classification_choices", to="endoreg_db.diseaseclassification"
|
|
589
|
+
),
|
|
590
|
+
),
|
|
620
591
|
],
|
|
621
592
|
),
|
|
622
593
|
migrations.CreateModel(
|
|
623
|
-
name=
|
|
594
|
+
name="Endoscope",
|
|
624
595
|
fields=[
|
|
625
|
-
(
|
|
626
|
-
(
|
|
627
|
-
(
|
|
628
|
-
|
|
629
|
-
|
|
630
|
-
|
|
631
|
-
|
|
632
|
-
|
|
633
|
-
|
|
634
|
-
|
|
635
|
-
|
|
636
|
-
|
|
637
|
-
|
|
638
|
-
migrations.CreateModel(
|
|
639
|
-
name='Endoscope',
|
|
640
|
-
fields=[
|
|
641
|
-
('id', models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name='ID')),
|
|
642
|
-
('name', models.CharField(max_length=255)),
|
|
643
|
-
('sn', models.CharField(max_length=255)),
|
|
644
|
-
('center', models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.CASCADE, related_name='endoscopes', to='endoreg_db.center')),
|
|
645
|
-
('endoscope_type', models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.CASCADE, related_name='endoscopes', to='endoreg_db.endoscopetype')),
|
|
596
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
597
|
+
("name", models.CharField(max_length=255)),
|
|
598
|
+
("sn", models.CharField(max_length=255)),
|
|
599
|
+
(
|
|
600
|
+
"center",
|
|
601
|
+
models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.CASCADE, related_name="endoscopes", to="endoreg_db.center"),
|
|
602
|
+
),
|
|
603
|
+
(
|
|
604
|
+
"endoscope_type",
|
|
605
|
+
models.ForeignKey(
|
|
606
|
+
blank=True, null=True, on_delete=django.db.models.deletion.CASCADE, related_name="endoscopes", to="endoreg_db.endoscopetype"
|
|
607
|
+
),
|
|
608
|
+
),
|
|
646
609
|
],
|
|
647
610
|
options={
|
|
648
|
-
|
|
649
|
-
|
|
650
|
-
|
|
611
|
+
"verbose_name": "Endoscope",
|
|
612
|
+
"verbose_name_plural": "Endoscopes",
|
|
613
|
+
"ordering": ["name"],
|
|
651
614
|
},
|
|
652
615
|
),
|
|
653
616
|
migrations.CreateModel(
|
|
654
|
-
name=
|
|
617
|
+
name="EndoscopyProcessor",
|
|
655
618
|
fields=[
|
|
656
|
-
(
|
|
657
|
-
(
|
|
658
|
-
(
|
|
659
|
-
(
|
|
660
|
-
(
|
|
661
|
-
(
|
|
662
|
-
(
|
|
663
|
-
(
|
|
664
|
-
(
|
|
665
|
-
(
|
|
666
|
-
(
|
|
667
|
-
(
|
|
668
|
-
(
|
|
669
|
-
(
|
|
670
|
-
(
|
|
671
|
-
(
|
|
672
|
-
(
|
|
673
|
-
(
|
|
674
|
-
(
|
|
675
|
-
(
|
|
676
|
-
(
|
|
677
|
-
(
|
|
678
|
-
(
|
|
679
|
-
(
|
|
680
|
-
(
|
|
681
|
-
(
|
|
682
|
-
(
|
|
683
|
-
(
|
|
684
|
-
(
|
|
685
|
-
(
|
|
686
|
-
(
|
|
687
|
-
(
|
|
688
|
-
(
|
|
689
|
-
(
|
|
690
|
-
(
|
|
691
|
-
(
|
|
692
|
-
(
|
|
619
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
620
|
+
("name", models.CharField(max_length=255)),
|
|
621
|
+
("image_width", models.IntegerField()),
|
|
622
|
+
("image_height", models.IntegerField()),
|
|
623
|
+
("endoscope_image_x", models.IntegerField()),
|
|
624
|
+
("endoscope_image_y", models.IntegerField()),
|
|
625
|
+
("endoscope_image_width", models.IntegerField()),
|
|
626
|
+
("endoscope_image_height", models.IntegerField()),
|
|
627
|
+
("examination_date_x", models.IntegerField()),
|
|
628
|
+
("examination_date_y", models.IntegerField()),
|
|
629
|
+
("examination_date_width", models.IntegerField()),
|
|
630
|
+
("examination_date_height", models.IntegerField()),
|
|
631
|
+
("examination_time_x", models.IntegerField(blank=True, null=True)),
|
|
632
|
+
("examination_time_y", models.IntegerField(blank=True, null=True)),
|
|
633
|
+
("examination_time_width", models.IntegerField(blank=True, null=True)),
|
|
634
|
+
("examination_time_height", models.IntegerField(blank=True, null=True)),
|
|
635
|
+
("patient_first_name_x", models.IntegerField()),
|
|
636
|
+
("patient_first_name_y", models.IntegerField()),
|
|
637
|
+
("patient_first_name_width", models.IntegerField()),
|
|
638
|
+
("patient_first_name_height", models.IntegerField()),
|
|
639
|
+
("patient_last_name_x", models.IntegerField()),
|
|
640
|
+
("patient_last_name_y", models.IntegerField()),
|
|
641
|
+
("patient_last_name_width", models.IntegerField()),
|
|
642
|
+
("patient_last_name_height", models.IntegerField()),
|
|
643
|
+
("patient_dob_x", models.IntegerField()),
|
|
644
|
+
("patient_dob_y", models.IntegerField()),
|
|
645
|
+
("patient_dob_width", models.IntegerField()),
|
|
646
|
+
("patient_dob_height", models.IntegerField()),
|
|
647
|
+
("endoscope_type_x", models.IntegerField(blank=True, null=True)),
|
|
648
|
+
("endoscope_type_y", models.IntegerField(blank=True, null=True)),
|
|
649
|
+
("endoscope_type_width", models.IntegerField(blank=True, null=True)),
|
|
650
|
+
("endoscope_type_height", models.IntegerField(blank=True, null=True)),
|
|
651
|
+
("endoscope_sn_x", models.IntegerField(blank=True, null=True)),
|
|
652
|
+
("endoscope_sn_y", models.IntegerField(blank=True, null=True)),
|
|
653
|
+
("endoscope_sn_width", models.IntegerField(blank=True, null=True)),
|
|
654
|
+
("endoscope_sn_height", models.IntegerField(blank=True, null=True)),
|
|
655
|
+
("centers", models.ManyToManyField(blank=True, related_name="endoscopy_processors", to="endoreg_db.center")),
|
|
693
656
|
],
|
|
694
657
|
),
|
|
695
658
|
migrations.CreateModel(
|
|
696
|
-
name=
|
|
659
|
+
name="EventClassification",
|
|
697
660
|
fields=[
|
|
698
|
-
(
|
|
699
|
-
(
|
|
700
|
-
(
|
|
701
|
-
('event_classification', models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.CASCADE, related_name='events', to='endoreg_db.eventclassification')),
|
|
661
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
662
|
+
("name", models.CharField(max_length=255, unique=True)),
|
|
663
|
+
("event", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name="event_classifications", to="endoreg_db.event")),
|
|
702
664
|
],
|
|
703
665
|
),
|
|
704
666
|
migrations.CreateModel(
|
|
705
|
-
name=
|
|
667
|
+
name="EventClassificationChoice",
|
|
706
668
|
fields=[
|
|
707
|
-
(
|
|
708
|
-
(
|
|
709
|
-
(
|
|
710
|
-
(
|
|
711
|
-
(
|
|
669
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
670
|
+
("name", models.CharField(max_length=255, unique=True)),
|
|
671
|
+
("subcategories", models.JSONField(default=dict)),
|
|
672
|
+
("numerical_descriptors", models.JSONField(default=dict)),
|
|
673
|
+
(
|
|
674
|
+
"event_classification",
|
|
675
|
+
models.ForeignKey(
|
|
676
|
+
on_delete=django.db.models.deletion.CASCADE, related_name="event_classification_choices", to="endoreg_db.eventclassification"
|
|
677
|
+
),
|
|
678
|
+
),
|
|
712
679
|
],
|
|
713
680
|
),
|
|
714
681
|
migrations.CreateModel(
|
|
715
|
-
name=
|
|
682
|
+
name="ExaminationIndicationClassification",
|
|
716
683
|
fields=[
|
|
717
|
-
(
|
|
718
|
-
(
|
|
719
|
-
(
|
|
720
|
-
(
|
|
684
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
685
|
+
("name", models.CharField(max_length=255, unique=True)),
|
|
686
|
+
("description", models.TextField(blank=True, null=True)),
|
|
687
|
+
("examinations", models.ManyToManyField(blank=True, related_name="indication_classifications", to="endoreg_db.examination")),
|
|
721
688
|
],
|
|
722
689
|
),
|
|
723
690
|
migrations.CreateModel(
|
|
724
|
-
name=
|
|
691
|
+
name="ExaminationIndicationClassificationChoice",
|
|
725
692
|
fields=[
|
|
726
|
-
(
|
|
727
|
-
(
|
|
728
|
-
(
|
|
729
|
-
(
|
|
730
|
-
(
|
|
693
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
694
|
+
("name", models.CharField(max_length=255, unique=True)),
|
|
695
|
+
("subcategories", models.JSONField(default=dict)),
|
|
696
|
+
("numerical_descriptors", models.JSONField(default=dict)),
|
|
697
|
+
(
|
|
698
|
+
"classification",
|
|
699
|
+
models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name="choices", to="endoreg_db.examinationindicationclassification"),
|
|
700
|
+
),
|
|
731
701
|
],
|
|
732
702
|
),
|
|
733
703
|
migrations.CreateModel(
|
|
734
|
-
name=
|
|
704
|
+
name="ExaminationRequirementSet",
|
|
735
705
|
fields=[
|
|
736
|
-
(
|
|
737
|
-
(
|
|
738
|
-
(
|
|
739
|
-
(
|
|
706
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
707
|
+
("enabled_by_default", models.BooleanField(default=False)),
|
|
708
|
+
("name", models.CharField(max_length=100, unique=True)),
|
|
709
|
+
("examinations", models.ManyToManyField(blank=True, related_name="exam_reqset_links", to="endoreg_db.examination")),
|
|
740
710
|
],
|
|
741
711
|
),
|
|
742
712
|
migrations.CreateModel(
|
|
743
|
-
name=
|
|
713
|
+
name="ExaminationTimeType",
|
|
744
714
|
fields=[
|
|
745
|
-
(
|
|
746
|
-
(
|
|
747
|
-
(
|
|
715
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
716
|
+
("name", models.CharField(max_length=100, unique=True)),
|
|
717
|
+
("examinations", models.ManyToManyField(blank=True, to="endoreg_db.examination")),
|
|
748
718
|
],
|
|
749
719
|
options={
|
|
750
|
-
|
|
751
|
-
|
|
752
|
-
|
|
720
|
+
"verbose_name": "Examination Time Type",
|
|
721
|
+
"verbose_name_plural": "Examination Time Types",
|
|
722
|
+
"ordering": ["name"],
|
|
753
723
|
},
|
|
754
724
|
),
|
|
755
725
|
migrations.CreateModel(
|
|
756
|
-
name=
|
|
726
|
+
name="ExaminationTime",
|
|
757
727
|
fields=[
|
|
758
|
-
(
|
|
759
|
-
(
|
|
760
|
-
(
|
|
761
|
-
(
|
|
762
|
-
(
|
|
728
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
729
|
+
("name", models.CharField(max_length=100, unique=True)),
|
|
730
|
+
("start_time", models.TimeField(blank=True, null=True)),
|
|
731
|
+
("end_time", models.TimeField(blank=True, null=True)),
|
|
732
|
+
("time_types", models.ManyToManyField(blank=True, to="endoreg_db.examinationtimetype")),
|
|
763
733
|
],
|
|
764
734
|
options={
|
|
765
|
-
|
|
766
|
-
|
|
767
|
-
|
|
735
|
+
"verbose_name": "Examination Time",
|
|
736
|
+
"verbose_name_plural": "Examination Times",
|
|
737
|
+
"ordering": ["name"],
|
|
768
738
|
},
|
|
769
739
|
),
|
|
770
740
|
migrations.AddField(
|
|
771
|
-
model_name=
|
|
772
|
-
name=
|
|
773
|
-
field=models.ManyToManyField(blank=True, to=
|
|
774
|
-
),
|
|
775
|
-
migrations.CreateModel(
|
|
776
|
-
name=
|
|
777
|
-
fields=[
|
|
778
|
-
(
|
|
779
|
-
(
|
|
780
|
-
(
|
|
781
|
-
(
|
|
782
|
-
(
|
|
783
|
-
(
|
|
784
|
-
(
|
|
785
|
-
(
|
|
786
|
-
(
|
|
787
|
-
(
|
|
741
|
+
model_name="examination",
|
|
742
|
+
name="examination_types",
|
|
743
|
+
field=models.ManyToManyField(blank=True, to="endoreg_db.examinationtype"),
|
|
744
|
+
),
|
|
745
|
+
migrations.CreateModel(
|
|
746
|
+
name="Examiner",
|
|
747
|
+
fields=[
|
|
748
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
749
|
+
("first_name", models.CharField(max_length=255)),
|
|
750
|
+
("last_name", models.CharField(max_length=255)),
|
|
751
|
+
("dob", models.DateField(blank=True, null=True, verbose_name="Date of Birth")),
|
|
752
|
+
("email", models.EmailField(blank=True, max_length=255, null=True)),
|
|
753
|
+
("phone", models.CharField(blank=True, max_length=255, null=True)),
|
|
754
|
+
("is_real_person", models.BooleanField(default=True)),
|
|
755
|
+
("post_code", models.CharField(blank=True, max_length=20, null=True)),
|
|
756
|
+
("city", models.CharField(blank=True, max_length=255, null=True)),
|
|
757
|
+
("street", models.CharField(blank=True, max_length=255, null=True)),
|
|
758
|
+
("hash", models.CharField(max_length=255, unique=True)),
|
|
759
|
+
("center", models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.CASCADE, to="endoreg_db.center")),
|
|
760
|
+
("gender", models.ForeignKey(null=True, on_delete=django.db.models.deletion.SET_NULL, to="endoreg_db.gender")),
|
|
788
761
|
],
|
|
789
762
|
options={
|
|
790
|
-
|
|
763
|
+
"abstract": False,
|
|
791
764
|
},
|
|
792
765
|
),
|
|
793
766
|
migrations.CreateModel(
|
|
794
|
-
name=
|
|
767
|
+
name="FindingIntervention",
|
|
795
768
|
fields=[
|
|
796
|
-
(
|
|
797
|
-
(
|
|
798
|
-
(
|
|
799
|
-
(
|
|
800
|
-
(
|
|
801
|
-
(
|
|
802
|
-
(
|
|
803
|
-
(
|
|
804
|
-
|
|
769
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
770
|
+
("name", models.CharField(max_length=100, unique=True)),
|
|
771
|
+
("name_de", models.CharField(max_length=100, null=True, unique=True)),
|
|
772
|
+
("name_en", models.CharField(max_length=100, null=True, unique=True)),
|
|
773
|
+
("description", models.TextField(blank=True, null=True)),
|
|
774
|
+
("description_de", models.TextField(blank=True, null=True)),
|
|
775
|
+
("description_en", models.TextField(blank=True, null=True)),
|
|
776
|
+
(
|
|
777
|
+
"contraindications",
|
|
778
|
+
models.ManyToManyField(blank=True, related_name="contraindicating_finding_interventions", to="endoreg_db.contraindication"),
|
|
779
|
+
),
|
|
780
|
+
("intervention_types", models.ManyToManyField(blank=True, related_name="interventions", to="endoreg_db.findinginterventiontype")),
|
|
805
781
|
],
|
|
806
782
|
),
|
|
807
783
|
migrations.CreateModel(
|
|
808
|
-
name=
|
|
784
|
+
name="Finding",
|
|
809
785
|
fields=[
|
|
810
|
-
(
|
|
811
|
-
(
|
|
812
|
-
(
|
|
813
|
-
(
|
|
814
|
-
(
|
|
815
|
-
(
|
|
816
|
-
(
|
|
817
|
-
(
|
|
818
|
-
(
|
|
819
|
-
(
|
|
786
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
787
|
+
("name", models.CharField(max_length=100, unique=True)),
|
|
788
|
+
("name_de", models.CharField(max_length=100, null=True, unique=True)),
|
|
789
|
+
("name_en", models.CharField(max_length=100, null=True, unique=True)),
|
|
790
|
+
("description", models.TextField(blank=True, null=True)),
|
|
791
|
+
("description_de", models.TextField(blank=True, null=True)),
|
|
792
|
+
("description_en", models.TextField(blank=True, null=True)),
|
|
793
|
+
("examinations", models.ManyToManyField(blank=True, related_name="findings", to="endoreg_db.examination")),
|
|
794
|
+
("finding_interventions", models.ManyToManyField(blank=True, related_name="findings", to="endoreg_db.findingintervention")),
|
|
795
|
+
("finding_types", models.ManyToManyField(blank=True, related_name="findings", to="endoreg_db.findingtype")),
|
|
820
796
|
],
|
|
821
797
|
),
|
|
822
798
|
migrations.CreateModel(
|
|
823
|
-
name=
|
|
799
|
+
name="ExaminationIndication",
|
|
824
800
|
fields=[
|
|
825
|
-
(
|
|
826
|
-
(
|
|
827
|
-
(
|
|
828
|
-
(
|
|
829
|
-
(
|
|
830
|
-
(
|
|
801
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
802
|
+
("name", models.CharField(max_length=255, unique=True)),
|
|
803
|
+
("description", models.TextField(blank=True, null=True)),
|
|
804
|
+
("examinations", models.ManyToManyField(blank=True, related_name="indications", to="endoreg_db.examination")),
|
|
805
|
+
("classifications", models.ManyToManyField(blank=True, related_name="indications", to="endoreg_db.examinationindicationclassification")),
|
|
806
|
+
("expected_interventions", models.ManyToManyField(blank=True, related_name="indications", to="endoreg_db.findingintervention")),
|
|
831
807
|
],
|
|
832
808
|
),
|
|
833
809
|
migrations.CreateModel(
|
|
834
|
-
name=
|
|
810
|
+
name="FindingClassification",
|
|
835
811
|
fields=[
|
|
836
|
-
(
|
|
837
|
-
(
|
|
838
|
-
(
|
|
839
|
-
(
|
|
840
|
-
(
|
|
841
|
-
(
|
|
842
|
-
(
|
|
843
|
-
(
|
|
844
|
-
(
|
|
845
|
-
(
|
|
846
|
-
(
|
|
847
|
-
(
|
|
812
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
813
|
+
("name", models.CharField(max_length=255, unique=True)),
|
|
814
|
+
("name_de", models.CharField(max_length=255, null=True, unique=True)),
|
|
815
|
+
("name_en", models.CharField(max_length=255, null=True, unique=True)),
|
|
816
|
+
("description", models.TextField(blank=True)),
|
|
817
|
+
("description_de", models.TextField(blank=True, null=True)),
|
|
818
|
+
("description_en", models.TextField(blank=True, null=True)),
|
|
819
|
+
("examinations", models.ManyToManyField(blank=True, related_name="finding_classifications", to="endoreg_db.examination")),
|
|
820
|
+
("findings", models.ManyToManyField(blank=True, related_name="finding_classifications", to="endoreg_db.finding")),
|
|
821
|
+
("choices", models.ManyToManyField(blank=True, related_name="classifications", to="endoreg_db.findingclassificationchoice")),
|
|
822
|
+
("classification_types", models.ManyToManyField(to="endoreg_db.findingclassificationtype")),
|
|
823
|
+
("finding_types", models.ManyToManyField(blank=True, related_name="finding_classifications", to="endoreg_db.findingtype")),
|
|
848
824
|
],
|
|
849
825
|
),
|
|
850
826
|
migrations.AddField(
|
|
851
|
-
model_name=
|
|
852
|
-
name=
|
|
853
|
-
field=models.ManyToManyField(related_name=
|
|
854
|
-
),
|
|
855
|
-
migrations.CreateModel(
|
|
856
|
-
name=
|
|
857
|
-
fields=[
|
|
858
|
-
(
|
|
859
|
-
(
|
|
860
|
-
(
|
|
861
|
-
(
|
|
862
|
-
(
|
|
863
|
-
(
|
|
864
|
-
(
|
|
865
|
-
(
|
|
866
|
-
(
|
|
827
|
+
model_name="center",
|
|
828
|
+
name="first_names",
|
|
829
|
+
field=models.ManyToManyField(related_name="centers", to="endoreg_db.firstname"),
|
|
830
|
+
),
|
|
831
|
+
migrations.CreateModel(
|
|
832
|
+
name="Employee",
|
|
833
|
+
fields=[
|
|
834
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
835
|
+
("first_name", models.CharField(max_length=255)),
|
|
836
|
+
("last_name", models.CharField(max_length=255)),
|
|
837
|
+
("dob", models.DateField(blank=True, null=True, verbose_name="Date of Birth")),
|
|
838
|
+
("email", models.EmailField(blank=True, max_length=255, null=True)),
|
|
839
|
+
("phone", models.CharField(blank=True, max_length=255, null=True)),
|
|
840
|
+
("is_real_person", models.BooleanField(default=True)),
|
|
841
|
+
("post_code", models.CharField(blank=True, max_length=20, null=True)),
|
|
842
|
+
("city", models.CharField(blank=True, max_length=255, null=True)),
|
|
843
|
+
("street", models.CharField(blank=True, max_length=255, null=True)),
|
|
844
|
+
("employee_type", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name="employees", to="endoreg_db.employeetype")),
|
|
845
|
+
("gender", models.ForeignKey(null=True, on_delete=django.db.models.deletion.SET_NULL, to="endoreg_db.gender")),
|
|
867
846
|
],
|
|
868
847
|
options={
|
|
869
|
-
|
|
848
|
+
"abstract": False,
|
|
870
849
|
},
|
|
871
850
|
),
|
|
872
851
|
migrations.CreateModel(
|
|
873
|
-
name=
|
|
852
|
+
name="InformationSource",
|
|
874
853
|
fields=[
|
|
875
|
-
(
|
|
876
|
-
(
|
|
877
|
-
(
|
|
878
|
-
(
|
|
879
|
-
(
|
|
880
|
-
(
|
|
881
|
-
(
|
|
882
|
-
(
|
|
854
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
855
|
+
("name", models.CharField(max_length=100)),
|
|
856
|
+
("url", models.URLField(blank=True, null=True)),
|
|
857
|
+
("description", models.TextField(blank=True, null=True)),
|
|
858
|
+
("date", models.DateField(blank=True, null=True)),
|
|
859
|
+
("date_created", models.DateField(auto_now_add=True)),
|
|
860
|
+
("date_modified", models.DateField(auto_now=True)),
|
|
861
|
+
("abbreviation", models.CharField(blank=True, max_length=100, null=True, unique=True)),
|
|
883
862
|
],
|
|
884
863
|
options={
|
|
885
|
-
|
|
886
|
-
|
|
887
|
-
|
|
864
|
+
"verbose_name": "Information Source",
|
|
865
|
+
"verbose_name_plural": "Information Sources",
|
|
866
|
+
"indexes": [
|
|
867
|
+
models.Index(fields=["name"], name="endoreg_db__name_febac5_idx"),
|
|
868
|
+
models.Index(fields=["abbreviation"], name="endoreg_db__abbrevi_5a07c4_idx"),
|
|
869
|
+
],
|
|
888
870
|
},
|
|
889
871
|
),
|
|
890
872
|
migrations.CreateModel(
|
|
891
|
-
name=
|
|
873
|
+
name="InformationSourceType",
|
|
892
874
|
fields=[
|
|
893
|
-
(
|
|
894
|
-
(
|
|
895
|
-
(
|
|
896
|
-
(
|
|
875
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
876
|
+
("name", models.CharField(max_length=100, unique=True)),
|
|
877
|
+
("description", models.TextField(blank=True, null=True)),
|
|
878
|
+
("information_sources", models.ManyToManyField(blank=True, related_name="information_source_types", to="endoreg_db.informationsource")),
|
|
897
879
|
],
|
|
898
880
|
options={
|
|
899
|
-
|
|
900
|
-
|
|
881
|
+
"verbose_name": "Information Source Type",
|
|
882
|
+
"verbose_name_plural": "Information Source Types",
|
|
901
883
|
},
|
|
902
884
|
),
|
|
903
885
|
migrations.CreateModel(
|
|
904
|
-
name=
|
|
886
|
+
name="LabelSet",
|
|
905
887
|
fields=[
|
|
906
|
-
(
|
|
907
|
-
(
|
|
908
|
-
(
|
|
909
|
-
(
|
|
910
|
-
(
|
|
888
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
889
|
+
("name", models.CharField(max_length=255)),
|
|
890
|
+
("description", models.TextField(blank=True, null=True)),
|
|
891
|
+
("version", models.IntegerField()),
|
|
892
|
+
("labels", models.ManyToManyField(related_name="label_sets", to="endoreg_db.label")),
|
|
911
893
|
],
|
|
912
894
|
),
|
|
913
895
|
migrations.AddField(
|
|
914
|
-
model_name=
|
|
915
|
-
name=
|
|
916
|
-
field=models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.CASCADE, related_name=
|
|
896
|
+
model_name="label",
|
|
897
|
+
name="label_type",
|
|
898
|
+
field=models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.CASCADE, related_name="labels", to="endoreg_db.labeltype"),
|
|
917
899
|
),
|
|
918
900
|
migrations.CreateModel(
|
|
919
|
-
name=
|
|
901
|
+
name="LabelVideoSegment",
|
|
920
902
|
fields=[
|
|
921
|
-
(
|
|
922
|
-
(
|
|
923
|
-
(
|
|
924
|
-
(
|
|
925
|
-
(
|
|
903
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
904
|
+
("start_frame_number", models.IntegerField()),
|
|
905
|
+
("end_frame_number", models.IntegerField()),
|
|
906
|
+
("label", models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, to="endoreg_db.label")),
|
|
907
|
+
("source", models.ForeignKey(null=True, on_delete=django.db.models.deletion.SET_NULL, to="endoreg_db.informationsource")),
|
|
926
908
|
],
|
|
927
909
|
),
|
|
928
910
|
migrations.CreateModel(
|
|
929
|
-
name=
|
|
911
|
+
name="LabelVideoSegmentState",
|
|
930
912
|
fields=[
|
|
931
|
-
(
|
|
932
|
-
(
|
|
933
|
-
(
|
|
934
|
-
(
|
|
935
|
-
(
|
|
936
|
-
(
|
|
937
|
-
(
|
|
938
|
-
(
|
|
913
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
914
|
+
("created_at", models.DateTimeField(auto_now_add=True)),
|
|
915
|
+
("updated_at", models.DateTimeField(auto_now=True)),
|
|
916
|
+
("prediction", models.BooleanField(default=False)),
|
|
917
|
+
("annotation", models.BooleanField(default=False)),
|
|
918
|
+
("frames_extracted", models.BooleanField(default=False)),
|
|
919
|
+
("is_validated", models.BooleanField(default=False)),
|
|
920
|
+
(
|
|
921
|
+
"origin",
|
|
922
|
+
models.OneToOneField(
|
|
923
|
+
blank=True, null=True, on_delete=django.db.models.deletion.CASCADE, related_name="state", to="endoreg_db.labelvideosegment"
|
|
924
|
+
),
|
|
925
|
+
),
|
|
939
926
|
],
|
|
940
927
|
options={
|
|
941
|
-
|
|
942
|
-
|
|
928
|
+
"verbose_name": "Label Video Segment State",
|
|
929
|
+
"verbose_name_plural": "Label Video Segment States",
|
|
943
930
|
},
|
|
944
931
|
),
|
|
945
932
|
migrations.CreateModel(
|
|
946
|
-
name=
|
|
947
|
-
fields=[
|
|
948
|
-
(
|
|
949
|
-
(
|
|
950
|
-
(
|
|
951
|
-
(
|
|
952
|
-
(
|
|
953
|
-
(
|
|
954
|
-
(
|
|
955
|
-
(
|
|
956
|
-
(
|
|
957
|
-
|
|
958
|
-
|
|
959
|
-
|
|
960
|
-
(
|
|
961
|
-
|
|
933
|
+
name="LabValue",
|
|
934
|
+
fields=[
|
|
935
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
936
|
+
("name", models.CharField(max_length=255, unique=True)),
|
|
937
|
+
("abbreviation", models.CharField(blank=True, max_length=10, null=True)),
|
|
938
|
+
("numeric_precision", models.IntegerField(default=3)),
|
|
939
|
+
("default_normal_range", models.JSONField(blank=True, null=True)),
|
|
940
|
+
("normal_range_age_dependent", models.BooleanField(default=False)),
|
|
941
|
+
("normal_range_gender_dependent", models.BooleanField(default=False)),
|
|
942
|
+
("normal_range_special_case", models.BooleanField(default=False)),
|
|
943
|
+
(
|
|
944
|
+
"bound_adjustment_factor",
|
|
945
|
+
models.FloatField(default=0.1, help_text="Factor for adjusting bounds when generating increased/decreased values, e.g., 0.1 for 10%."),
|
|
946
|
+
),
|
|
947
|
+
(
|
|
948
|
+
"default_date_value_distribution",
|
|
949
|
+
models.ForeignKey(
|
|
950
|
+
blank=True,
|
|
951
|
+
null=True,
|
|
952
|
+
on_delete=django.db.models.deletion.CASCADE,
|
|
953
|
+
related_name="default_date_value_distribution",
|
|
954
|
+
to="endoreg_db.datevaluedistribution",
|
|
955
|
+
),
|
|
956
|
+
),
|
|
957
|
+
(
|
|
958
|
+
"default_multiple_categorical_value_distribution",
|
|
959
|
+
models.ForeignKey(
|
|
960
|
+
blank=True,
|
|
961
|
+
null=True,
|
|
962
|
+
on_delete=django.db.models.deletion.CASCADE,
|
|
963
|
+
related_name="default_multiple_categorical_value_distribution",
|
|
964
|
+
to="endoreg_db.multiplecategoricalvaluedistribution",
|
|
965
|
+
),
|
|
966
|
+
),
|
|
967
|
+
(
|
|
968
|
+
"default_numerical_value_distribution",
|
|
969
|
+
models.ForeignKey(
|
|
970
|
+
blank=True,
|
|
971
|
+
null=True,
|
|
972
|
+
on_delete=django.db.models.deletion.CASCADE,
|
|
973
|
+
related_name="default_numerical_value_distribution",
|
|
974
|
+
to="endoreg_db.numericvaluedistribution",
|
|
975
|
+
),
|
|
976
|
+
),
|
|
977
|
+
(
|
|
978
|
+
"default_single_categorical_value_distribution",
|
|
979
|
+
models.ForeignKey(
|
|
980
|
+
blank=True,
|
|
981
|
+
null=True,
|
|
982
|
+
on_delete=django.db.models.deletion.CASCADE,
|
|
983
|
+
related_name="default_single_categorical_value_distribution",
|
|
984
|
+
to="endoreg_db.singlecategoricalvaluedistribution",
|
|
985
|
+
),
|
|
986
|
+
),
|
|
987
|
+
("default_unit", models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.CASCADE, to="endoreg_db.unit")),
|
|
962
988
|
],
|
|
963
989
|
),
|
|
964
990
|
migrations.AddField(
|
|
965
|
-
model_name=
|
|
966
|
-
name=
|
|
967
|
-
field=models.ManyToManyField(blank=True, related_name=
|
|
991
|
+
model_name="findingintervention",
|
|
992
|
+
name="required_lab_values",
|
|
993
|
+
field=models.ManyToManyField(blank=True, related_name="required_by_finding_interventions", to="endoreg_db.labvalue"),
|
|
968
994
|
),
|
|
969
995
|
migrations.AddField(
|
|
970
|
-
model_name=
|
|
971
|
-
name=
|
|
972
|
-
field=models.ManyToManyField(related_name=
|
|
973
|
-
),
|
|
974
|
-
migrations.CreateModel(
|
|
975
|
-
name=
|
|
976
|
-
fields=[
|
|
977
|
-
(
|
|
978
|
-
(
|
|
979
|
-
(
|
|
980
|
-
],
|
|
981
|
-
),
|
|
982
|
-
migrations.CreateModel(
|
|
983
|
-
name=
|
|
984
|
-
fields=[
|
|
985
|
-
(
|
|
986
|
-
(
|
|
987
|
-
(
|
|
988
|
-
(
|
|
989
|
-
(
|
|
990
|
-
(
|
|
991
|
-
(
|
|
992
|
-
(
|
|
993
|
-
],
|
|
994
|
-
),
|
|
995
|
-
migrations.CreateModel(
|
|
996
|
-
name=
|
|
997
|
-
fields=[
|
|
998
|
-
(
|
|
999
|
-
(
|
|
1000
|
-
(
|
|
1001
|
-
(
|
|
1002
|
-
(
|
|
1003
|
-
(
|
|
1004
|
-
(
|
|
1005
|
-
|
|
1006
|
-
|
|
1007
|
-
|
|
1008
|
-
|
|
1009
|
-
|
|
1010
|
-
|
|
1011
|
-
|
|
1012
|
-
|
|
1013
|
-
|
|
1014
|
-
|
|
1015
|
-
|
|
1016
|
-
(
|
|
1017
|
-
(
|
|
1018
|
-
(
|
|
1019
|
-
(
|
|
1020
|
-
|
|
1021
|
-
|
|
1022
|
-
|
|
1023
|
-
(
|
|
1024
|
-
|
|
1025
|
-
|
|
1026
|
-
|
|
996
|
+
model_name="center",
|
|
997
|
+
name="last_names",
|
|
998
|
+
field=models.ManyToManyField(related_name="centers", to="endoreg_db.lastname"),
|
|
999
|
+
),
|
|
1000
|
+
migrations.CreateModel(
|
|
1001
|
+
name="Material",
|
|
1002
|
+
fields=[
|
|
1003
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1004
|
+
("name", models.CharField(max_length=255)),
|
|
1005
|
+
("emission_factor", models.ForeignKey(null=True, on_delete=django.db.models.deletion.SET_NULL, to="endoreg_db.emissionfactor")),
|
|
1006
|
+
],
|
|
1007
|
+
),
|
|
1008
|
+
migrations.CreateModel(
|
|
1009
|
+
name="MedicationSchedule",
|
|
1010
|
+
fields=[
|
|
1011
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1012
|
+
("name", models.CharField(max_length=255, unique=True)),
|
|
1013
|
+
("description", models.TextField(blank=True, null=True)),
|
|
1014
|
+
("therapy_duration_d", models.FloatField(blank=True, null=True)),
|
|
1015
|
+
("dose", models.FloatField()),
|
|
1016
|
+
("intake_times", models.ManyToManyField(to="endoreg_db.medicationintaketime")),
|
|
1017
|
+
("medication", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, to="endoreg_db.medication")),
|
|
1018
|
+
("unit", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, to="endoreg_db.unit")),
|
|
1019
|
+
],
|
|
1020
|
+
),
|
|
1021
|
+
migrations.CreateModel(
|
|
1022
|
+
name="MedicationIndication",
|
|
1023
|
+
fields=[
|
|
1024
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1025
|
+
("name", models.CharField(max_length=255, unique=True)),
|
|
1026
|
+
("disease_classification_choices", models.ManyToManyField(to="endoreg_db.diseaseclassificationchoice")),
|
|
1027
|
+
("diseases", models.ManyToManyField(to="endoreg_db.disease")),
|
|
1028
|
+
("events", models.ManyToManyField(to="endoreg_db.event")),
|
|
1029
|
+
("sources", models.ManyToManyField(to="endoreg_db.informationsource")),
|
|
1030
|
+
(
|
|
1031
|
+
"indication_type",
|
|
1032
|
+
models.ForeignKey(
|
|
1033
|
+
on_delete=django.db.models.deletion.CASCADE, related_name="medication_indications", to="endoreg_db.medicationindicationtype"
|
|
1034
|
+
),
|
|
1035
|
+
),
|
|
1036
|
+
("medication_schedules", models.ManyToManyField(to="endoreg_db.medicationschedule")),
|
|
1037
|
+
],
|
|
1038
|
+
),
|
|
1039
|
+
migrations.CreateModel(
|
|
1040
|
+
name="ModelMeta",
|
|
1041
|
+
fields=[
|
|
1042
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1043
|
+
("name", models.CharField(help_text="User-defined name for this specific model metadata set (e.g., 'segmentation_base').", max_length=255)),
|
|
1044
|
+
("version", models.CharField(help_text="Version identifier for this metadata set (e.g., '1', '2a').", max_length=255)),
|
|
1045
|
+
(
|
|
1046
|
+
"activation",
|
|
1047
|
+
models.CharField(default="sigmoid", help_text="Output activation function (e.g., 'sigmoid', 'softmax', 'none').", max_length=50),
|
|
1048
|
+
),
|
|
1049
|
+
(
|
|
1050
|
+
"weights",
|
|
1051
|
+
models.FileField(
|
|
1052
|
+
blank=True,
|
|
1053
|
+
help_text="Path to the model weights file (.safetensors), relative to MEDIA_ROOT.",
|
|
1054
|
+
null=True,
|
|
1055
|
+
upload_to="model_weights",
|
|
1056
|
+
validators=[django.core.validators.FileExtensionValidator(allowed_extensions=["safetensors", "pth", "pt"])],
|
|
1057
|
+
),
|
|
1058
|
+
),
|
|
1059
|
+
(
|
|
1060
|
+
"mean",
|
|
1061
|
+
models.CharField(
|
|
1062
|
+
default="0.45211223,0.27139644,0.19264949", help_text="Comma-separated mean values for input normalization.", max_length=255
|
|
1063
|
+
),
|
|
1064
|
+
),
|
|
1065
|
+
(
|
|
1066
|
+
"std",
|
|
1067
|
+
models.CharField(
|
|
1068
|
+
default="0.31418097,0.21088019,0.16059452",
|
|
1069
|
+
help_text="Comma-separated standard deviation values for input normalization.",
|
|
1070
|
+
max_length=255,
|
|
1071
|
+
),
|
|
1072
|
+
),
|
|
1073
|
+
("size_x", models.IntegerField(default=716, help_text="Expected input image width.")),
|
|
1074
|
+
("size_y", models.IntegerField(default=716, help_text="Expected input image height.")),
|
|
1075
|
+
("axes", models.CharField(default="2,0,1", help_text="Comma-separated target axis order (e.g., '2,0,1' for CHW).", max_length=10)),
|
|
1076
|
+
("batchsize", models.IntegerField(default=16, help_text="Default batch size for inference.")),
|
|
1077
|
+
("num_workers", models.IntegerField(default=0, help_text="Default number of workers for data loading.")),
|
|
1078
|
+
("description", models.TextField(blank=True, help_text="Optional description.", null=True)),
|
|
1079
|
+
("date_created", models.DateTimeField(auto_now_add=True)),
|
|
1080
|
+
(
|
|
1081
|
+
"labelset",
|
|
1082
|
+
models.ForeignKey(
|
|
1083
|
+
help_text="The set of labels this model version predicts.",
|
|
1084
|
+
on_delete=django.db.models.deletion.CASCADE,
|
|
1085
|
+
related_name="model_metadata",
|
|
1086
|
+
to="endoreg_db.labelset",
|
|
1087
|
+
),
|
|
1088
|
+
),
|
|
1089
|
+
(
|
|
1090
|
+
"model",
|
|
1091
|
+
models.ForeignKey(
|
|
1092
|
+
help_text="The base AI model architecture this metadata belongs to.",
|
|
1093
|
+
on_delete=django.db.models.deletion.CASCADE,
|
|
1094
|
+
related_name="metadata_versions",
|
|
1095
|
+
to="endoreg_db.aimodel",
|
|
1096
|
+
),
|
|
1097
|
+
),
|
|
1027
1098
|
],
|
|
1099
|
+
options={
|
|
1100
|
+
"verbose_name": "Model Metadata",
|
|
1101
|
+
"verbose_name_plural": "Model Metadata",
|
|
1102
|
+
"ordering": ["-date_created"],
|
|
1103
|
+
"unique_together": {("name", "version", "model")},
|
|
1104
|
+
},
|
|
1028
1105
|
),
|
|
1029
1106
|
migrations.AddField(
|
|
1030
|
-
model_name=
|
|
1031
|
-
name=
|
|
1032
|
-
field=models.ForeignKey(
|
|
1107
|
+
model_name="aimodel",
|
|
1108
|
+
name="active_meta",
|
|
1109
|
+
field=models.ForeignKey(
|
|
1110
|
+
blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, related_name="active_model", to="endoreg_db.modelmeta"
|
|
1111
|
+
),
|
|
1033
1112
|
),
|
|
1034
1113
|
migrations.CreateModel(
|
|
1035
|
-
name=
|
|
1114
|
+
name="ActiveModel",
|
|
1036
1115
|
fields=[
|
|
1037
|
-
(
|
|
1038
|
-
(
|
|
1039
|
-
(
|
|
1116
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1117
|
+
("name", models.CharField(max_length=255, unique=True)),
|
|
1118
|
+
("model_meta", models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, to="endoreg_db.modelmeta")),
|
|
1040
1119
|
],
|
|
1041
1120
|
),
|
|
1042
1121
|
migrations.AddField(
|
|
1043
|
-
model_name=
|
|
1044
|
-
name=
|
|
1045
|
-
field=models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.CASCADE, related_name=
|
|
1046
|
-
),
|
|
1047
|
-
migrations.CreateModel(
|
|
1048
|
-
name=
|
|
1049
|
-
fields=[
|
|
1050
|
-
(
|
|
1051
|
-
(
|
|
1052
|
-
(
|
|
1053
|
-
(
|
|
1054
|
-
|
|
1055
|
-
|
|
1056
|
-
|
|
1057
|
-
|
|
1058
|
-
|
|
1059
|
-
(
|
|
1060
|
-
(
|
|
1061
|
-
(
|
|
1062
|
-
(
|
|
1063
|
-
('first_name', models.CharField(max_length=100)),
|
|
1064
|
-
('last_name', models.CharField(max_length=100)),
|
|
1065
|
-
('dob', models.DateField(blank=True, null=True)),
|
|
1066
|
-
('patient_hash', models.CharField(blank=True, max_length=255, null=True)),
|
|
1067
|
-
('center', models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, to='endoreg_db.center')),
|
|
1068
|
-
('gender', models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, to='endoreg_db.gender')),
|
|
1122
|
+
model_name="aimodel",
|
|
1123
|
+
name="model_type",
|
|
1124
|
+
field=models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.CASCADE, related_name="ai_models", to="endoreg_db.modeltype"),
|
|
1125
|
+
),
|
|
1126
|
+
migrations.CreateModel(
|
|
1127
|
+
name="Patient",
|
|
1128
|
+
fields=[
|
|
1129
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1130
|
+
("email", models.EmailField(blank=True, max_length=255, null=True)),
|
|
1131
|
+
("phone", models.CharField(blank=True, max_length=255, null=True)),
|
|
1132
|
+
("is_real_person", models.BooleanField(default=True)),
|
|
1133
|
+
("post_code", models.CharField(blank=True, max_length=20, null=True)),
|
|
1134
|
+
("city", models.CharField(blank=True, max_length=255, null=True)),
|
|
1135
|
+
("street", models.CharField(blank=True, max_length=255, null=True)),
|
|
1136
|
+
("first_name", models.CharField(max_length=100)),
|
|
1137
|
+
("last_name", models.CharField(max_length=100)),
|
|
1138
|
+
("dob", models.DateField(blank=True, null=True)),
|
|
1139
|
+
("patient_hash", models.CharField(blank=True, max_length=255, null=True)),
|
|
1140
|
+
("center", models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, to="endoreg_db.center")),
|
|
1141
|
+
("gender", models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, to="endoreg_db.gender")),
|
|
1069
1142
|
],
|
|
1070
1143
|
options={
|
|
1071
|
-
|
|
1144
|
+
"abstract": False,
|
|
1072
1145
|
},
|
|
1073
1146
|
),
|
|
1074
1147
|
migrations.CreateModel(
|
|
1075
|
-
name=
|
|
1148
|
+
name="PatientDisease",
|
|
1076
1149
|
fields=[
|
|
1077
|
-
(
|
|
1078
|
-
(
|
|
1079
|
-
(
|
|
1080
|
-
(
|
|
1081
|
-
(
|
|
1082
|
-
(
|
|
1083
|
-
(
|
|
1084
|
-
(
|
|
1085
|
-
(
|
|
1150
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1151
|
+
("start_date", models.DateField(blank=True, null=True)),
|
|
1152
|
+
("end_date", models.DateField(blank=True, null=True)),
|
|
1153
|
+
("numerical_descriptors", models.JSONField(default=dict)),
|
|
1154
|
+
("subcategories", models.JSONField(default=dict)),
|
|
1155
|
+
("last_update", models.DateTimeField(auto_now=True)),
|
|
1156
|
+
("classification_choices", models.ManyToManyField(to="endoreg_db.diseaseclassificationchoice")),
|
|
1157
|
+
("disease", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name="patient_diseases", to="endoreg_db.disease")),
|
|
1158
|
+
("patient", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name="diseases", to="endoreg_db.patient")),
|
|
1086
1159
|
],
|
|
1087
1160
|
options={
|
|
1088
|
-
|
|
1089
|
-
|
|
1161
|
+
"verbose_name": "Patient Disease",
|
|
1162
|
+
"verbose_name_plural": "Patient Diseases",
|
|
1090
1163
|
},
|
|
1091
1164
|
),
|
|
1092
1165
|
migrations.CreateModel(
|
|
1093
|
-
name=
|
|
1166
|
+
name="PatientEvent",
|
|
1094
1167
|
fields=[
|
|
1095
|
-
(
|
|
1096
|
-
(
|
|
1097
|
-
(
|
|
1098
|
-
(
|
|
1099
|
-
(
|
|
1100
|
-
(
|
|
1101
|
-
(
|
|
1102
|
-
(
|
|
1103
|
-
|
|
1104
|
-
|
|
1168
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1169
|
+
("date_start", models.DateField()),
|
|
1170
|
+
("date_end", models.DateField(blank=True, null=True)),
|
|
1171
|
+
("description", models.TextField(blank=True, null=True)),
|
|
1172
|
+
("subcategories", models.JSONField(default=dict)),
|
|
1173
|
+
("numerical_descriptors", models.JSONField(default=dict)),
|
|
1174
|
+
("last_update", models.DateTimeField(auto_now=True)),
|
|
1175
|
+
(
|
|
1176
|
+
"classification_choice",
|
|
1177
|
+
models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.CASCADE, to="endoreg_db.eventclassificationchoice"),
|
|
1178
|
+
),
|
|
1179
|
+
("event", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name="patient_events", to="endoreg_db.event")),
|
|
1180
|
+
("patient", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name="events", to="endoreg_db.patient")),
|
|
1105
1181
|
],
|
|
1106
1182
|
),
|
|
1107
1183
|
migrations.CreateModel(
|
|
1108
|
-
name=
|
|
1184
|
+
name="PatientExamination",
|
|
1109
1185
|
fields=[
|
|
1110
|
-
(
|
|
1111
|
-
(
|
|
1112
|
-
(
|
|
1113
|
-
(
|
|
1114
|
-
(
|
|
1115
|
-
(
|
|
1186
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1187
|
+
("date_start", models.DateField(blank=True, null=True)),
|
|
1188
|
+
("date_end", models.DateField(blank=True, null=True)),
|
|
1189
|
+
("hash", models.CharField(max_length=255, unique=True)),
|
|
1190
|
+
("examination", models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.CASCADE, to="endoreg_db.examination")),
|
|
1191
|
+
("patient", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name="patient_examinations", to="endoreg_db.patient")),
|
|
1116
1192
|
],
|
|
1117
1193
|
options={
|
|
1118
|
-
|
|
1119
|
-
|
|
1120
|
-
|
|
1194
|
+
"verbose_name": "Patient Examination",
|
|
1195
|
+
"verbose_name_plural": "Patient Examinations",
|
|
1196
|
+
"ordering": ["patient", "examination", "date_start"],
|
|
1121
1197
|
},
|
|
1122
1198
|
),
|
|
1123
1199
|
migrations.CreateModel(
|
|
1124
|
-
name=
|
|
1125
|
-
fields=[
|
|
1126
|
-
(
|
|
1127
|
-
(
|
|
1128
|
-
(
|
|
1129
|
-
(
|
|
1130
|
-
(
|
|
1131
|
-
(
|
|
1132
|
-
(
|
|
1133
|
-
(
|
|
1134
|
-
(
|
|
1135
|
-
(
|
|
1136
|
-
|
|
1200
|
+
name="Case",
|
|
1201
|
+
fields=[
|
|
1202
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1203
|
+
("hash", models.CharField(blank=True, help_text="An optional hash value associated with the case.", max_length=255, null=True)),
|
|
1204
|
+
("start_date", models.DateTimeField(db_index=True, help_text="The start date and time of the case.")),
|
|
1205
|
+
("end_date", models.DateTimeField(blank=True, help_text="The end date and time of the case (optional).", null=True)),
|
|
1206
|
+
("is_active", models.BooleanField(db_index=True, default=True, help_text="Flag indicating if the case is currently active.")),
|
|
1207
|
+
("is_closed", models.BooleanField(db_index=True, default=False, help_text="Flag indicating if the case has been closed.")),
|
|
1208
|
+
("is_deleted", models.BooleanField(db_index=True, default=False, help_text="Flag indicating if the case is marked as deleted.")),
|
|
1209
|
+
("created_at", models.DateTimeField(auto_now_add=True, help_text="The date and time the case was created.")),
|
|
1210
|
+
("updated_at", models.DateTimeField(auto_now=True, help_text="The date and time the case was last updated.")),
|
|
1211
|
+
(
|
|
1212
|
+
"patient",
|
|
1213
|
+
models.ForeignKey(
|
|
1214
|
+
help_text="The patient associated with this case.",
|
|
1215
|
+
on_delete=django.db.models.deletion.CASCADE,
|
|
1216
|
+
related_name="cases",
|
|
1217
|
+
to="endoreg_db.patient",
|
|
1218
|
+
),
|
|
1219
|
+
),
|
|
1220
|
+
(
|
|
1221
|
+
"patient_examinations",
|
|
1222
|
+
models.ManyToManyField(help_text="The examinations included in this case.", related_name="cases", to="endoreg_db.patientexamination"),
|
|
1223
|
+
),
|
|
1137
1224
|
],
|
|
1138
1225
|
options={
|
|
1139
|
-
|
|
1140
|
-
|
|
1141
|
-
|
|
1226
|
+
"verbose_name": "Case",
|
|
1227
|
+
"verbose_name_plural": "Cases",
|
|
1228
|
+
"ordering": ["-start_date", "patient"],
|
|
1142
1229
|
},
|
|
1143
1230
|
),
|
|
1144
1231
|
migrations.CreateModel(
|
|
1145
|
-
name=
|
|
1232
|
+
name="AnonymExaminationReport",
|
|
1146
1233
|
fields=[
|
|
1147
|
-
(
|
|
1148
|
-
(
|
|
1149
|
-
(
|
|
1150
|
-
(
|
|
1151
|
-
(
|
|
1152
|
-
(
|
|
1153
|
-
(
|
|
1154
|
-
(
|
|
1155
|
-
(
|
|
1156
|
-
(
|
|
1157
|
-
(
|
|
1234
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1235
|
+
("meta", models.JSONField(blank=True, null=True)),
|
|
1236
|
+
("text", models.TextField(blank=True, null=True)),
|
|
1237
|
+
("date", models.DateField(blank=True, null=True)),
|
|
1238
|
+
("time", models.TimeField(blank=True, null=True)),
|
|
1239
|
+
("file", models.FileField(blank=True, null=True, upload_to="pdfs")),
|
|
1240
|
+
("center", models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, to="endoreg_db.center")),
|
|
1241
|
+
("type", models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, to="endoreg_db.documenttype")),
|
|
1242
|
+
("examiners", models.ManyToManyField(blank=True, to="endoreg_db.examiner")),
|
|
1243
|
+
("patient", models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.DO_NOTHING, to="endoreg_db.patient")),
|
|
1244
|
+
(
|
|
1245
|
+
"patient_examination",
|
|
1246
|
+
models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, to="endoreg_db.patientexamination"),
|
|
1247
|
+
),
|
|
1158
1248
|
],
|
|
1159
1249
|
options={
|
|
1160
|
-
|
|
1250
|
+
"abstract": False,
|
|
1161
1251
|
},
|
|
1162
1252
|
),
|
|
1163
1253
|
migrations.CreateModel(
|
|
1164
|
-
name=
|
|
1165
|
-
fields=[
|
|
1166
|
-
(
|
|
1167
|
-
(
|
|
1168
|
-
(
|
|
1169
|
-
|
|
1170
|
-
|
|
1171
|
-
|
|
1172
|
-
|
|
1173
|
-
|
|
1174
|
-
|
|
1175
|
-
|
|
1176
|
-
|
|
1177
|
-
|
|
1178
|
-
|
|
1179
|
-
|
|
1180
|
-
|
|
1181
|
-
|
|
1182
|
-
|
|
1183
|
-
(
|
|
1184
|
-
(
|
|
1254
|
+
name="PatientExaminationIndication",
|
|
1255
|
+
fields=[
|
|
1256
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1257
|
+
("examination_indication", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, to="endoreg_db.examinationindication")),
|
|
1258
|
+
(
|
|
1259
|
+
"indication_choice",
|
|
1260
|
+
models.ForeignKey(
|
|
1261
|
+
blank=True, null=True, on_delete=django.db.models.deletion.CASCADE, to="endoreg_db.examinationindicationclassificationchoice"
|
|
1262
|
+
),
|
|
1263
|
+
),
|
|
1264
|
+
(
|
|
1265
|
+
"patient_examination",
|
|
1266
|
+
models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name="indications", to="endoreg_db.patientexamination"),
|
|
1267
|
+
),
|
|
1268
|
+
],
|
|
1269
|
+
),
|
|
1270
|
+
migrations.CreateModel(
|
|
1271
|
+
name="PatientExternalID",
|
|
1272
|
+
fields=[
|
|
1273
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1274
|
+
("external_id", models.CharField(max_length=255)),
|
|
1275
|
+
("origin", models.CharField(max_length=255)),
|
|
1276
|
+
("patient", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name="external_ids", to="endoreg_db.patient")),
|
|
1277
|
+
],
|
|
1278
|
+
),
|
|
1279
|
+
migrations.CreateModel(
|
|
1280
|
+
name="PatientFinding",
|
|
1281
|
+
fields=[
|
|
1282
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1283
|
+
("created_at", models.DateTimeField(auto_now_add=True)),
|
|
1284
|
+
("updated_at", models.DateTimeField(auto_now=True)),
|
|
1285
|
+
("is_active", models.BooleanField(default=True, help_text="Deaktiviert statt gelöscht für Audit-Trail")),
|
|
1286
|
+
("deactivated_at", models.DateTimeField(blank=True, null=True)),
|
|
1287
|
+
(
|
|
1288
|
+
"created_by",
|
|
1289
|
+
models.ForeignKey(
|
|
1290
|
+
blank=True, null=True, on_delete=django.db.models.deletion.PROTECT, related_name="created_findings", to=settings.AUTH_USER_MODEL
|
|
1291
|
+
),
|
|
1292
|
+
),
|
|
1293
|
+
(
|
|
1294
|
+
"deactivated_by",
|
|
1295
|
+
models.ForeignKey(
|
|
1296
|
+
blank=True, null=True, on_delete=django.db.models.deletion.PROTECT, related_name="deactivated_findings", to=settings.AUTH_USER_MODEL
|
|
1297
|
+
),
|
|
1298
|
+
),
|
|
1299
|
+
("finding", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name="finding_patient_findings", to="endoreg_db.finding")),
|
|
1300
|
+
(
|
|
1301
|
+
"patient_examination",
|
|
1302
|
+
models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name="patient_findings", to="endoreg_db.patientexamination"),
|
|
1303
|
+
),
|
|
1304
|
+
(
|
|
1305
|
+
"updated_by",
|
|
1306
|
+
models.ForeignKey(
|
|
1307
|
+
blank=True, null=True, on_delete=django.db.models.deletion.PROTECT, related_name="updated_findings", to=settings.AUTH_USER_MODEL
|
|
1308
|
+
),
|
|
1309
|
+
),
|
|
1185
1310
|
],
|
|
1186
1311
|
options={
|
|
1187
|
-
|
|
1188
|
-
|
|
1189
|
-
|
|
1312
|
+
"verbose_name": "Patient Finding",
|
|
1313
|
+
"verbose_name_plural": "Patient Findings",
|
|
1314
|
+
"ordering": ["patient_examination", "finding"],
|
|
1190
1315
|
},
|
|
1191
1316
|
),
|
|
1192
1317
|
migrations.AddField(
|
|
1193
|
-
model_name=
|
|
1194
|
-
name=
|
|
1195
|
-
field=models.ManyToManyField(blank=True, related_name=
|
|
1196
|
-
),
|
|
1197
|
-
migrations.CreateModel(
|
|
1198
|
-
name=
|
|
1199
|
-
fields=[
|
|
1200
|
-
(
|
|
1201
|
-
(
|
|
1202
|
-
(
|
|
1203
|
-
(
|
|
1204
|
-
(
|
|
1205
|
-
|
|
1206
|
-
|
|
1318
|
+
model_name="labelvideosegment",
|
|
1319
|
+
name="patient_findings",
|
|
1320
|
+
field=models.ManyToManyField(blank=True, related_name="video_segments", to="endoreg_db.patientfinding"),
|
|
1321
|
+
),
|
|
1322
|
+
migrations.CreateModel(
|
|
1323
|
+
name="PatientFindingClassification",
|
|
1324
|
+
fields=[
|
|
1325
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1326
|
+
("is_active", models.BooleanField(default=True, help_text="Indicates if the classification is currently active.")),
|
|
1327
|
+
("subcategories", models.JSONField(blank=True, null=True)),
|
|
1328
|
+
("numerical_descriptors", models.JSONField(blank=True, null=True)),
|
|
1329
|
+
(
|
|
1330
|
+
"classification",
|
|
1331
|
+
models.ForeignKey(
|
|
1332
|
+
on_delete=django.db.models.deletion.CASCADE, related_name="patient_finding_classifications", to="endoreg_db.findingclassification"
|
|
1333
|
+
),
|
|
1334
|
+
),
|
|
1335
|
+
(
|
|
1336
|
+
"classification_choice",
|
|
1337
|
+
models.ForeignKey(
|
|
1338
|
+
on_delete=django.db.models.deletion.CASCADE, related_name="patient_finding_classifications", to="endoreg_db.findingclassificationchoice"
|
|
1339
|
+
),
|
|
1340
|
+
),
|
|
1341
|
+
("finding", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name="classifications", to="endoreg_db.patientfinding")),
|
|
1207
1342
|
],
|
|
1208
1343
|
options={
|
|
1209
|
-
|
|
1210
|
-
|
|
1211
|
-
|
|
1344
|
+
"verbose_name": "Patient Finding Classification",
|
|
1345
|
+
"verbose_name_plural": "Patient Finding Classifications",
|
|
1346
|
+
"ordering": ["finding", "classification", "classification_choice"],
|
|
1212
1347
|
},
|
|
1213
1348
|
),
|
|
1214
1349
|
migrations.CreateModel(
|
|
1215
|
-
name=
|
|
1216
|
-
fields=[
|
|
1217
|
-
(
|
|
1218
|
-
(
|
|
1219
|
-
(
|
|
1220
|
-
(
|
|
1221
|
-
(
|
|
1222
|
-
(
|
|
1223
|
-
(
|
|
1224
|
-
(
|
|
1225
|
-
|
|
1226
|
-
|
|
1227
|
-
|
|
1228
|
-
|
|
1229
|
-
|
|
1230
|
-
|
|
1231
|
-
|
|
1232
|
-
|
|
1233
|
-
|
|
1234
|
-
|
|
1235
|
-
|
|
1236
|
-
|
|
1237
|
-
|
|
1238
|
-
|
|
1239
|
-
|
|
1240
|
-
|
|
1241
|
-
|
|
1242
|
-
|
|
1243
|
-
|
|
1244
|
-
(
|
|
1245
|
-
(
|
|
1246
|
-
(
|
|
1350
|
+
name="PatientFindingIntervention",
|
|
1351
|
+
fields=[
|
|
1352
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1353
|
+
("is_active", models.BooleanField(default=True, help_text="Indicates if the intervention is currently active.")),
|
|
1354
|
+
("state", models.CharField(blank=True, max_length=100, null=True)),
|
|
1355
|
+
("time_start", models.DateTimeField(blank=True, null=True)),
|
|
1356
|
+
("time_end", models.DateTimeField(blank=True, null=True)),
|
|
1357
|
+
("date", models.DateField(blank=True, null=True)),
|
|
1358
|
+
("finding", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name="interventions", to="endoreg_db.patientfinding")),
|
|
1359
|
+
(
|
|
1360
|
+
"intervention",
|
|
1361
|
+
models.ForeignKey(
|
|
1362
|
+
on_delete=django.db.models.deletion.CASCADE, related_name="patient_finding_interventions", to="endoreg_db.findingintervention"
|
|
1363
|
+
),
|
|
1364
|
+
),
|
|
1365
|
+
],
|
|
1366
|
+
),
|
|
1367
|
+
migrations.CreateModel(
|
|
1368
|
+
name="PatientLabSample",
|
|
1369
|
+
fields=[
|
|
1370
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1371
|
+
("date", models.DateTimeField()),
|
|
1372
|
+
("patient", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name="lab_samples", to="endoreg_db.patient")),
|
|
1373
|
+
("sample_type", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, to="endoreg_db.patientlabsampletype")),
|
|
1374
|
+
],
|
|
1375
|
+
),
|
|
1376
|
+
migrations.CreateModel(
|
|
1377
|
+
name="PatientMedication",
|
|
1378
|
+
fields=[
|
|
1379
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1380
|
+
("dosage", models.JSONField(blank=True, null=True)),
|
|
1381
|
+
("active", models.BooleanField(default=True)),
|
|
1382
|
+
("intake_times", models.ManyToManyField(blank=True, related_name="intake_time_patient_medications", to="endoreg_db.medicationintaketime")),
|
|
1383
|
+
(
|
|
1384
|
+
"medication",
|
|
1385
|
+
models.ForeignKey(
|
|
1386
|
+
blank=True, on_delete=django.db.models.deletion.CASCADE, related_name="medication_patient_medications", to="endoreg_db.medication"
|
|
1387
|
+
),
|
|
1388
|
+
),
|
|
1389
|
+
(
|
|
1390
|
+
"medication_indication",
|
|
1391
|
+
models.ForeignKey(
|
|
1392
|
+
null=True,
|
|
1393
|
+
on_delete=django.db.models.deletion.CASCADE,
|
|
1394
|
+
related_name="indication_patient_medications",
|
|
1395
|
+
to="endoreg_db.medicationindication",
|
|
1396
|
+
),
|
|
1397
|
+
),
|
|
1398
|
+
("patient", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, to="endoreg_db.patient")),
|
|
1399
|
+
("unit", models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.CASCADE, to="endoreg_db.unit")),
|
|
1247
1400
|
],
|
|
1248
1401
|
options={
|
|
1249
|
-
|
|
1250
|
-
|
|
1402
|
+
"verbose_name": "Patient Medication",
|
|
1403
|
+
"verbose_name_plural": "Patient Medications",
|
|
1251
1404
|
},
|
|
1252
1405
|
),
|
|
1253
1406
|
migrations.CreateModel(
|
|
1254
|
-
name=
|
|
1407
|
+
name="PatientMedicationSchedule",
|
|
1255
1408
|
fields=[
|
|
1256
|
-
(
|
|
1257
|
-
(
|
|
1258
|
-
(
|
|
1259
|
-
(
|
|
1260
|
-
(
|
|
1409
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1410
|
+
("created_at", models.DateTimeField(auto_now_add=True)),
|
|
1411
|
+
("updated_at", models.DateTimeField(auto_now=True)),
|
|
1412
|
+
("medication", models.ManyToManyField(blank=True, related_name="patient_medication_schedules", to="endoreg_db.patientmedication")),
|
|
1413
|
+
("patient", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, to="endoreg_db.patient")),
|
|
1261
1414
|
],
|
|
1262
1415
|
),
|
|
1263
1416
|
migrations.CreateModel(
|
|
1264
|
-
name=
|
|
1417
|
+
name="PdfMeta",
|
|
1265
1418
|
fields=[
|
|
1266
|
-
(
|
|
1267
|
-
(
|
|
1268
|
-
(
|
|
1269
|
-
(
|
|
1270
|
-
(
|
|
1419
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1420
|
+
("date", models.DateField()),
|
|
1421
|
+
("time", models.TimeField()),
|
|
1422
|
+
("pdf_hash", models.CharField(max_length=255, unique=True)),
|
|
1423
|
+
("pdf_type", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, to="endoreg_db.pdftype")),
|
|
1271
1424
|
],
|
|
1272
1425
|
),
|
|
1273
1426
|
migrations.CreateModel(
|
|
1274
|
-
name=
|
|
1427
|
+
name="CenterProduct",
|
|
1275
1428
|
fields=[
|
|
1276
|
-
(
|
|
1277
|
-
(
|
|
1278
|
-
(
|
|
1279
|
-
(
|
|
1429
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1430
|
+
("date_used", models.DateField()),
|
|
1431
|
+
("center", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name="center_products", to="endoreg_db.center")),
|
|
1432
|
+
("product", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name="center_products", to="endoreg_db.product")),
|
|
1280
1433
|
],
|
|
1281
1434
|
options={
|
|
1282
|
-
|
|
1283
|
-
|
|
1284
|
-
|
|
1435
|
+
"verbose_name": "Center Product Usage",
|
|
1436
|
+
"verbose_name_plural": "Center Product Usages",
|
|
1437
|
+
"ordering": ["center", "-date_used", "product"],
|
|
1285
1438
|
},
|
|
1286
1439
|
),
|
|
1287
1440
|
migrations.AddField(
|
|
1288
|
-
model_name=
|
|
1289
|
-
name=
|
|
1290
|
-
field=models.ForeignKey(null=True, on_delete=django.db.models.deletion.SET_NULL, related_name=
|
|
1291
|
-
),
|
|
1292
|
-
migrations.CreateModel(
|
|
1293
|
-
name=
|
|
1294
|
-
fields=[
|
|
1295
|
-
(
|
|
1296
|
-
(
|
|
1297
|
-
(
|
|
1298
|
-
|
|
1299
|
-
|
|
1441
|
+
model_name="product",
|
|
1442
|
+
name="product_group",
|
|
1443
|
+
field=models.ForeignKey(null=True, on_delete=django.db.models.deletion.SET_NULL, related_name="products", to="endoreg_db.productgroup"),
|
|
1444
|
+
),
|
|
1445
|
+
migrations.CreateModel(
|
|
1446
|
+
name="PortalUserInfo",
|
|
1447
|
+
fields=[
|
|
1448
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1449
|
+
("works_in_endoscopy", models.BooleanField(blank=True, null=True)),
|
|
1450
|
+
(
|
|
1451
|
+
"examiner",
|
|
1452
|
+
models.OneToOneField(
|
|
1453
|
+
blank=True, null=True, on_delete=django.db.models.deletion.CASCADE, related_name="portal_user_info", to="endoreg_db.examiner"
|
|
1454
|
+
),
|
|
1455
|
+
),
|
|
1456
|
+
("user", models.OneToOneField(on_delete=django.db.models.deletion.CASCADE, to=settings.AUTH_USER_MODEL)),
|
|
1457
|
+
(
|
|
1458
|
+
"profession",
|
|
1459
|
+
models.ForeignKey(
|
|
1460
|
+
blank=True, null=True, on_delete=django.db.models.deletion.CASCADE, related_name="portal_user_infos", to="endoreg_db.profession"
|
|
1461
|
+
),
|
|
1462
|
+
),
|
|
1300
1463
|
],
|
|
1301
1464
|
),
|
|
1302
1465
|
migrations.AddField(
|
|
1303
|
-
model_name=
|
|
1304
|
-
name=
|
|
1305
|
-
field=models.ManyToManyField(related_name=
|
|
1466
|
+
model_name="employeetype",
|
|
1467
|
+
name="qualifications",
|
|
1468
|
+
field=models.ManyToManyField(related_name="employee_types", to="endoreg_db.qualification"),
|
|
1306
1469
|
),
|
|
1307
1470
|
migrations.CreateModel(
|
|
1308
|
-
name=
|
|
1471
|
+
name="EmployeeQualification",
|
|
1309
1472
|
fields=[
|
|
1310
|
-
(
|
|
1311
|
-
(
|
|
1312
|
-
(
|
|
1473
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1474
|
+
("employee", models.OneToOneField(on_delete=django.db.models.deletion.CASCADE, related_name="qualification", to="endoreg_db.employee")),
|
|
1475
|
+
("qualifications", models.ManyToManyField(related_name="employee_qualifications", to="endoreg_db.qualification")),
|
|
1313
1476
|
],
|
|
1314
1477
|
),
|
|
1315
1478
|
migrations.AddField(
|
|
1316
|
-
model_name=
|
|
1317
|
-
name=
|
|
1318
|
-
field=models.ManyToManyField(related_name=
|
|
1319
|
-
),
|
|
1320
|
-
migrations.CreateModel(
|
|
1321
|
-
name=
|
|
1322
|
-
fields=[
|
|
1323
|
-
(
|
|
1324
|
-
(
|
|
1325
|
-
(
|
|
1326
|
-
|
|
1327
|
-
|
|
1328
|
-
|
|
1329
|
-
|
|
1330
|
-
|
|
1331
|
-
|
|
1332
|
-
|
|
1333
|
-
|
|
1334
|
-
|
|
1335
|
-
|
|
1336
|
-
|
|
1337
|
-
(
|
|
1338
|
-
|
|
1339
|
-
|
|
1340
|
-
|
|
1341
|
-
|
|
1342
|
-
|
|
1343
|
-
(
|
|
1344
|
-
(
|
|
1479
|
+
model_name="qualification",
|
|
1480
|
+
name="qualification_types",
|
|
1481
|
+
field=models.ManyToManyField(related_name="qualifications", to="endoreg_db.qualificationtype"),
|
|
1482
|
+
),
|
|
1483
|
+
migrations.CreateModel(
|
|
1484
|
+
name="ReferenceProduct",
|
|
1485
|
+
fields=[
|
|
1486
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1487
|
+
("name", models.CharField(max_length=255)),
|
|
1488
|
+
(
|
|
1489
|
+
"emission_factor_package",
|
|
1490
|
+
models.ForeignKey(
|
|
1491
|
+
null=True, on_delete=django.db.models.deletion.SET_NULL, related_name="reference_product_package", to="endoreg_db.emissionfactor"
|
|
1492
|
+
),
|
|
1493
|
+
),
|
|
1494
|
+
(
|
|
1495
|
+
"emission_factor_product",
|
|
1496
|
+
models.ForeignKey(
|
|
1497
|
+
null=True, on_delete=django.db.models.deletion.SET_NULL, related_name="reference_product_product", to="endoreg_db.emissionfactor"
|
|
1498
|
+
),
|
|
1499
|
+
),
|
|
1500
|
+
(
|
|
1501
|
+
"emission_factor_total",
|
|
1502
|
+
models.ForeignKey(
|
|
1503
|
+
blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, related_name="reference_products", to="endoreg_db.emissionfactor"
|
|
1504
|
+
),
|
|
1505
|
+
),
|
|
1506
|
+
("product", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name="reference_products", to="endoreg_db.product")),
|
|
1507
|
+
(
|
|
1508
|
+
"product_group",
|
|
1509
|
+
models.OneToOneField(on_delete=django.db.models.deletion.CASCADE, related_name="reference_product", to="endoreg_db.productgroup"),
|
|
1510
|
+
),
|
|
1511
|
+
],
|
|
1512
|
+
),
|
|
1513
|
+
migrations.CreateModel(
|
|
1514
|
+
name="ReportReaderConfig",
|
|
1515
|
+
fields=[
|
|
1516
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1517
|
+
("locale", models.CharField(default="de_DE", max_length=10)),
|
|
1518
|
+
("text_date_format", models.CharField(default="%d.%m.%Y", max_length=10)),
|
|
1519
|
+
("first_names", models.ManyToManyField(related_name="report_reader_configs", to="endoreg_db.firstname")),
|
|
1520
|
+
("last_names", models.ManyToManyField(related_name="report_reader_configs", to="endoreg_db.lastname")),
|
|
1521
|
+
("cut_off_above", models.ManyToManyField(related_name="report_reader_configs_cut_off_above", to="endoreg_db.reportreaderflag")),
|
|
1522
|
+
("cut_off_below", models.ManyToManyField(related_name="report_reader_configs_cut_off_below", to="endoreg_db.reportreaderflag")),
|
|
1523
|
+
(
|
|
1524
|
+
"endoscope_info_line_flag",
|
|
1525
|
+
models.ForeignKey(
|
|
1526
|
+
on_delete=django.db.models.deletion.CASCADE, related_name="report_reader_configs_endoscope_info_line", to="endoreg_db.reportreaderflag"
|
|
1527
|
+
),
|
|
1528
|
+
),
|
|
1529
|
+
(
|
|
1530
|
+
"examiner_info_line_flag",
|
|
1531
|
+
models.ForeignKey(
|
|
1532
|
+
on_delete=django.db.models.deletion.CASCADE, related_name="report_reader_configs_examiner_info_line", to="endoreg_db.reportreaderflag"
|
|
1533
|
+
),
|
|
1534
|
+
),
|
|
1535
|
+
(
|
|
1536
|
+
"patient_info_line_flag",
|
|
1537
|
+
models.ForeignKey(
|
|
1538
|
+
on_delete=django.db.models.deletion.CASCADE, related_name="report_reader_configs_patient_info_line", to="endoreg_db.reportreaderflag"
|
|
1539
|
+
),
|
|
1540
|
+
),
|
|
1345
1541
|
],
|
|
1346
1542
|
),
|
|
1347
1543
|
migrations.AddField(
|
|
1348
|
-
model_name=
|
|
1349
|
-
name=
|
|
1350
|
-
field=models.ManyToManyField(related_name=
|
|
1544
|
+
model_name="pdftype",
|
|
1545
|
+
name="cut_off_above_lines",
|
|
1546
|
+
field=models.ManyToManyField(related_name="pdf_type_cut_off_above_lines", to="endoreg_db.reportreaderflag"),
|
|
1351
1547
|
),
|
|
1352
1548
|
migrations.AddField(
|
|
1353
|
-
model_name=
|
|
1354
|
-
name=
|
|
1355
|
-
field=models.ManyToManyField(related_name=
|
|
1549
|
+
model_name="pdftype",
|
|
1550
|
+
name="cut_off_below_lines",
|
|
1551
|
+
field=models.ManyToManyField(related_name="pdf_type_cut_off_below_lines", to="endoreg_db.reportreaderflag"),
|
|
1356
1552
|
),
|
|
1357
1553
|
migrations.AddField(
|
|
1358
|
-
model_name=
|
|
1359
|
-
name=
|
|
1360
|
-
field=models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name=
|
|
1554
|
+
model_name="pdftype",
|
|
1555
|
+
name="endoscope_info_line",
|
|
1556
|
+
field=models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name="pdf_type_endoscopy_info_line", to="endoreg_db.reportreaderflag"),
|
|
1361
1557
|
),
|
|
1362
1558
|
migrations.AddField(
|
|
1363
|
-
model_name=
|
|
1364
|
-
name=
|
|
1365
|
-
field=models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name=
|
|
1559
|
+
model_name="pdftype",
|
|
1560
|
+
name="examiner_info_line",
|
|
1561
|
+
field=models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name="pdf_type_examiner_info_line", to="endoreg_db.reportreaderflag"),
|
|
1366
1562
|
),
|
|
1367
1563
|
migrations.AddField(
|
|
1368
|
-
model_name=
|
|
1369
|
-
name=
|
|
1370
|
-
field=models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name=
|
|
1371
|
-
),
|
|
1372
|
-
migrations.CreateModel(
|
|
1373
|
-
name=
|
|
1374
|
-
fields=[
|
|
1375
|
-
(
|
|
1376
|
-
(
|
|
1377
|
-
(
|
|
1378
|
-
(
|
|
1379
|
-
|
|
1380
|
-
|
|
1381
|
-
|
|
1382
|
-
|
|
1383
|
-
|
|
1384
|
-
(
|
|
1385
|
-
|
|
1386
|
-
|
|
1387
|
-
|
|
1388
|
-
|
|
1389
|
-
|
|
1390
|
-
(
|
|
1391
|
-
|
|
1392
|
-
|
|
1393
|
-
|
|
1394
|
-
|
|
1395
|
-
|
|
1396
|
-
(
|
|
1397
|
-
|
|
1398
|
-
|
|
1399
|
-
|
|
1400
|
-
|
|
1401
|
-
|
|
1402
|
-
|
|
1403
|
-
|
|
1404
|
-
|
|
1405
|
-
|
|
1406
|
-
|
|
1407
|
-
|
|
1408
|
-
|
|
1409
|
-
|
|
1410
|
-
|
|
1411
|
-
|
|
1412
|
-
|
|
1413
|
-
|
|
1414
|
-
|
|
1415
|
-
|
|
1416
|
-
|
|
1417
|
-
|
|
1418
|
-
(
|
|
1419
|
-
(
|
|
1420
|
-
(
|
|
1421
|
-
(
|
|
1422
|
-
(
|
|
1423
|
-
(
|
|
1564
|
+
model_name="pdftype",
|
|
1565
|
+
name="patient_info_line",
|
|
1566
|
+
field=models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name="pdf_type_patient_info_line", to="endoreg_db.reportreaderflag"),
|
|
1567
|
+
),
|
|
1568
|
+
migrations.CreateModel(
|
|
1569
|
+
name="Requirement",
|
|
1570
|
+
fields=[
|
|
1571
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1572
|
+
("name", models.CharField(max_length=100, unique=True)),
|
|
1573
|
+
("description", models.TextField(blank=True, null=True)),
|
|
1574
|
+
(
|
|
1575
|
+
"numeric_value",
|
|
1576
|
+
models.FloatField(
|
|
1577
|
+
blank=True, help_text="Numeric value for the requirement. If not set, the requirement is not used in calculations.", null=True
|
|
1578
|
+
),
|
|
1579
|
+
),
|
|
1580
|
+
(
|
|
1581
|
+
"numeric_value_min",
|
|
1582
|
+
models.FloatField(
|
|
1583
|
+
blank=True, help_text="Minimum numeric value for the requirement. If not set, the requirement is not used in calculations.", null=True
|
|
1584
|
+
),
|
|
1585
|
+
),
|
|
1586
|
+
(
|
|
1587
|
+
"numeric_value_max",
|
|
1588
|
+
models.FloatField(
|
|
1589
|
+
blank=True, help_text="Maximum numeric value for the requirement. If not set, the requirement is not used in calculations.", null=True
|
|
1590
|
+
),
|
|
1591
|
+
),
|
|
1592
|
+
(
|
|
1593
|
+
"string_value",
|
|
1594
|
+
models.CharField(
|
|
1595
|
+
blank=True,
|
|
1596
|
+
help_text="String value for the requirement. If not set, the requirement is not used in calculations.",
|
|
1597
|
+
max_length=100,
|
|
1598
|
+
null=True,
|
|
1599
|
+
),
|
|
1600
|
+
),
|
|
1601
|
+
(
|
|
1602
|
+
"string_values",
|
|
1603
|
+
models.TextField(
|
|
1604
|
+
blank=True,
|
|
1605
|
+
help_text=" ','-separated list of string values for the requirement.If not set, the requirement is not used in calculations.",
|
|
1606
|
+
null=True,
|
|
1607
|
+
),
|
|
1608
|
+
),
|
|
1609
|
+
("disease_classification_choices", models.ManyToManyField(blank=True, related_name="required_in", to="endoreg_db.diseaseclassificationchoice")),
|
|
1610
|
+
("diseases", models.ManyToManyField(blank=True, related_name="required_in", to="endoreg_db.disease")),
|
|
1611
|
+
("events", models.ManyToManyField(blank=True, related_name="required_in", to="endoreg_db.event")),
|
|
1612
|
+
("examination_indications", models.ManyToManyField(blank=True, related_name="required_in", to="endoreg_db.examinationindication")),
|
|
1613
|
+
("examinations", models.ManyToManyField(blank=True, related_name="required_in", to="endoreg_db.examination")),
|
|
1614
|
+
("finding_classification_choices", models.ManyToManyField(blank=True, related_name="required_in", to="endoreg_db.findingclassificationchoice")),
|
|
1615
|
+
("finding_classifications", models.ManyToManyField(blank=True, related_name="required_in", to="endoreg_db.findingclassification")),
|
|
1616
|
+
("finding_interventions", models.ManyToManyField(blank=True, related_name="required_in", to="endoreg_db.findingintervention")),
|
|
1617
|
+
("findings", models.ManyToManyField(blank=True, related_name="required_in", to="endoreg_db.finding")),
|
|
1618
|
+
("genders", models.ManyToManyField(blank=True, related_name="required_in", to="endoreg_db.gender")),
|
|
1619
|
+
("lab_values", models.ManyToManyField(blank=True, related_name="required_in", to="endoreg_db.labvalue")),
|
|
1620
|
+
("medication_indications", models.ManyToManyField(blank=True, related_name="required_in", to="endoreg_db.medicationindication")),
|
|
1621
|
+
("medication_intake_times", models.ManyToManyField(blank=True, related_name="required_in", to="endoreg_db.medicationintaketime")),
|
|
1622
|
+
("medication_schedules", models.ManyToManyField(blank=True, related_name="required_in", to="endoreg_db.medicationschedule")),
|
|
1623
|
+
("medications", models.ManyToManyField(blank=True, related_name="required_in", to="endoreg_db.medication")),
|
|
1624
|
+
("operators", models.ManyToManyField(blank=True, related_name="required_in", to="endoreg_db.requirementoperator")),
|
|
1625
|
+
("requirement_types", models.ManyToManyField(blank=True, related_name="linked_requirements", to="endoreg_db.requirementtype")),
|
|
1626
|
+
(
|
|
1627
|
+
"unit",
|
|
1628
|
+
models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.CASCADE, related_name="required_in", to="endoreg_db.unit"),
|
|
1629
|
+
),
|
|
1630
|
+
],
|
|
1631
|
+
),
|
|
1632
|
+
migrations.CreateModel(
|
|
1633
|
+
name="Risk",
|
|
1634
|
+
fields=[
|
|
1635
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1636
|
+
("name", models.CharField(max_length=100, unique=True)),
|
|
1637
|
+
("name_de", models.CharField(blank=True, max_length=100, null=True)),
|
|
1638
|
+
("name_en", models.CharField(blank=True, max_length=100, null=True)),
|
|
1639
|
+
("description", models.TextField(blank=True, null=True)),
|
|
1640
|
+
(
|
|
1641
|
+
"risk_value",
|
|
1642
|
+
models.FloatField(blank=True, help_text="Risk value for the risk. If not set, the risk is not used in calculations.", null=True),
|
|
1643
|
+
),
|
|
1644
|
+
(
|
|
1645
|
+
"risk_type",
|
|
1646
|
+
models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.CASCADE, related_name="risks", to="endoreg_db.risktype"),
|
|
1647
|
+
),
|
|
1648
|
+
],
|
|
1649
|
+
),
|
|
1650
|
+
migrations.CreateModel(
|
|
1651
|
+
name="SensitiveMeta",
|
|
1652
|
+
fields=[
|
|
1653
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1654
|
+
("examination_date", models.DateField(blank=True, null=True)),
|
|
1655
|
+
("examination_time", models.TimeField(blank=True, null=True)),
|
|
1656
|
+
("casenumber", models.CharField(blank=True, max_length=255, null=True)),
|
|
1657
|
+
("file_path", models.CharField(blank=True, max_length=1024, null=True)),
|
|
1658
|
+
("patient_first_name", models.CharField(blank=True, max_length=255, null=True)),
|
|
1659
|
+
("patient_last_name", models.CharField(blank=True, max_length=255, null=True)),
|
|
1660
|
+
("patient_dob", models.DateTimeField(blank=True, help_text="Date of birth (can be auto-generated).", null=True)),
|
|
1661
|
+
("examiner_first_name", models.CharField(blank=True, editable=False, max_length=255, null=True)),
|
|
1662
|
+
("examiner_last_name", models.CharField(blank=True, editable=False, max_length=255, null=True)),
|
|
1663
|
+
("patient_hash", models.CharField(blank=True, db_index=True, editable=False, max_length=64, null=True)),
|
|
1664
|
+
("examination_hash", models.CharField(blank=True, db_index=True, editable=False, max_length=64, null=True)),
|
|
1665
|
+
("endoscope_type", models.CharField(blank=True, max_length=255, null=True)),
|
|
1666
|
+
("endoscope_sn", models.CharField(blank=True, max_length=255, null=True)),
|
|
1667
|
+
("text", models.TextField(blank=True, null=True)),
|
|
1668
|
+
("anonymized_text", models.TextField(blank=True, null=True)),
|
|
1669
|
+
("center", models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.CASCADE, to="endoreg_db.center")),
|
|
1670
|
+
("examiners", models.ManyToManyField(blank=True, help_text="Pseudo-anonymized examiner(s)", to="endoreg_db.examiner")),
|
|
1671
|
+
("external_id", models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.CASCADE, to="endoreg_db.patientexternalid")),
|
|
1672
|
+
("patient_gender", models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.CASCADE, to="endoreg_db.gender")),
|
|
1673
|
+
(
|
|
1674
|
+
"pseudo_examination",
|
|
1675
|
+
models.ForeignKey(
|
|
1676
|
+
blank=True,
|
|
1677
|
+
help_text="FK to the pseudo-anonymized PatientExamination record.",
|
|
1678
|
+
null=True,
|
|
1679
|
+
on_delete=django.db.models.deletion.CASCADE,
|
|
1680
|
+
to="endoreg_db.patientexamination",
|
|
1681
|
+
),
|
|
1682
|
+
),
|
|
1683
|
+
(
|
|
1684
|
+
"pseudo_patient",
|
|
1685
|
+
models.ForeignKey(
|
|
1686
|
+
blank=True,
|
|
1687
|
+
help_text="FK to the pseudo-anonymized Patient record.",
|
|
1688
|
+
null=True,
|
|
1689
|
+
on_delete=django.db.models.deletion.CASCADE,
|
|
1690
|
+
to="endoreg_db.patient",
|
|
1691
|
+
),
|
|
1692
|
+
),
|
|
1693
|
+
],
|
|
1694
|
+
),
|
|
1695
|
+
migrations.CreateModel(
|
|
1696
|
+
name="RawPdfFile",
|
|
1697
|
+
fields=[
|
|
1698
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1699
|
+
("pdf_hash", models.CharField(max_length=255, unique=True)),
|
|
1700
|
+
("text", models.TextField(blank=True, null=True)),
|
|
1701
|
+
("date_created", models.DateTimeField(auto_now_add=True)),
|
|
1702
|
+
("date_modified", models.DateTimeField(auto_now=True)),
|
|
1703
|
+
("anonymized", models.BooleanField(default=False, help_text="True if the PDF has been anonymized.")),
|
|
1704
|
+
("file", models.FileField(upload_to="pdfs", validators=[django.core.validators.FileExtensionValidator(allowed_extensions=["pdf"])])),
|
|
1705
|
+
(
|
|
1706
|
+
"anonymized_file",
|
|
1707
|
+
models.FileField(
|
|
1708
|
+
blank=True, null=True, upload_to="pdfs", validators=[django.core.validators.FileExtensionValidator(allowed_extensions=["pdf"])]
|
|
1709
|
+
),
|
|
1710
|
+
),
|
|
1711
|
+
("state_report_processing_required", models.BooleanField(default=True)),
|
|
1712
|
+
("state_report_processed", models.BooleanField(default=False)),
|
|
1713
|
+
("raw_meta", models.JSONField(blank=True, null=True)),
|
|
1714
|
+
("anonymized_text", models.TextField(blank=True, null=True)),
|
|
1715
|
+
(
|
|
1716
|
+
"anonym_examination_report",
|
|
1717
|
+
models.OneToOneField(
|
|
1718
|
+
blank=True,
|
|
1719
|
+
null=True,
|
|
1720
|
+
on_delete=django.db.models.deletion.SET_NULL,
|
|
1721
|
+
related_name="raw_pdf_file",
|
|
1722
|
+
to="endoreg_db.anonymexaminationreport",
|
|
1723
|
+
),
|
|
1724
|
+
),
|
|
1725
|
+
("center", models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, to="endoreg_db.center")),
|
|
1726
|
+
(
|
|
1727
|
+
"examination",
|
|
1728
|
+
models.ForeignKey(
|
|
1729
|
+
blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, related_name="raw_pdf_files", to="endoreg_db.patientexamination"
|
|
1730
|
+
),
|
|
1731
|
+
),
|
|
1732
|
+
("examiner", models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, to="endoreg_db.examiner")),
|
|
1733
|
+
(
|
|
1734
|
+
"patient",
|
|
1735
|
+
models.ForeignKey(
|
|
1736
|
+
blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, related_name="raw_pdf_files", to="endoreg_db.patient"
|
|
1737
|
+
),
|
|
1738
|
+
),
|
|
1739
|
+
("pdf_type", models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, to="endoreg_db.pdftype")),
|
|
1740
|
+
(
|
|
1741
|
+
"state",
|
|
1742
|
+
models.OneToOneField(
|
|
1743
|
+
blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, related_name="raw_pdf_file", to="endoreg_db.rawpdfstate"
|
|
1744
|
+
),
|
|
1745
|
+
),
|
|
1746
|
+
(
|
|
1747
|
+
"sensitive_meta",
|
|
1748
|
+
models.ForeignKey(
|
|
1749
|
+
blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, related_name="raw_pdf_files", to="endoreg_db.sensitivemeta"
|
|
1750
|
+
),
|
|
1751
|
+
),
|
|
1752
|
+
],
|
|
1753
|
+
),
|
|
1754
|
+
migrations.CreateModel(
|
|
1755
|
+
name="AnonymHistologyReport",
|
|
1756
|
+
fields=[
|
|
1757
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1758
|
+
("meta", models.JSONField(blank=True, null=True)),
|
|
1759
|
+
("text", models.TextField(blank=True, null=True)),
|
|
1760
|
+
("date", models.DateField(blank=True, null=True)),
|
|
1761
|
+
("time", models.TimeField(blank=True, null=True)),
|
|
1762
|
+
("file", models.FileField(blank=True, null=True, upload_to="pdfs")),
|
|
1763
|
+
("center", models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, to="endoreg_db.center")),
|
|
1764
|
+
("type", models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, to="endoreg_db.documenttype")),
|
|
1765
|
+
("examiners", models.ManyToManyField(blank=True, to="endoreg_db.examiner")),
|
|
1766
|
+
("patient", models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.DO_NOTHING, to="endoreg_db.patient")),
|
|
1767
|
+
(
|
|
1768
|
+
"patient_examination",
|
|
1769
|
+
models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, to="endoreg_db.patientexamination"),
|
|
1770
|
+
),
|
|
1771
|
+
("sensitive_meta", models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, to="endoreg_db.sensitivemeta")),
|
|
1424
1772
|
],
|
|
1425
1773
|
options={
|
|
1426
|
-
|
|
1427
|
-
'verbose_name_plural': 'Rules',
|
|
1428
|
-
},
|
|
1429
|
-
),
|
|
1430
|
-
migrations.CreateModel(
|
|
1431
|
-
name='Ruleset',
|
|
1432
|
-
fields=[
|
|
1433
|
-
('id', models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name='ID')),
|
|
1434
|
-
('name', models.CharField(max_length=255, unique=True)),
|
|
1435
|
-
('rules', models.ManyToManyField(to='endoreg_db.rule')),
|
|
1436
|
-
],
|
|
1437
|
-
),
|
|
1438
|
-
migrations.CreateModel(
|
|
1439
|
-
name='SensitiveMeta',
|
|
1440
|
-
fields=[
|
|
1441
|
-
('id', models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name='ID')),
|
|
1442
|
-
('examination_date', models.DateField(blank=True, null=True)),
|
|
1443
|
-
('patient_first_name', models.CharField(blank=True, max_length=255, null=True)),
|
|
1444
|
-
('patient_last_name', models.CharField(blank=True, max_length=255, null=True)),
|
|
1445
|
-
('patient_dob', models.DateTimeField(blank=True, help_text='Date of birth (can be auto-generated if missing).', null=True)),
|
|
1446
|
-
('examiner_first_name', models.CharField(blank=True, editable=False, max_length=255, null=True)),
|
|
1447
|
-
('examiner_last_name', models.CharField(blank=True, editable=False, max_length=255, null=True)),
|
|
1448
|
-
('examination_hash', models.CharField(blank=True, db_index=True, editable=False, max_length=64, null=True)),
|
|
1449
|
-
('patient_hash', models.CharField(blank=True, db_index=True, editable=False, max_length=64, null=True)),
|
|
1450
|
-
('endoscope_type', models.CharField(blank=True, max_length=255, null=True)),
|
|
1451
|
-
('endoscope_sn', models.CharField(blank=True, max_length=255, null=True)),
|
|
1452
|
-
('center', models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.CASCADE, to='endoreg_db.center')),
|
|
1453
|
-
('examiners', models.ManyToManyField(blank=True, help_text='Pseudo-anonymized examiner(s) associated with the examination.', to='endoreg_db.examiner')),
|
|
1454
|
-
('patient_gender', models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.CASCADE, to='endoreg_db.gender')),
|
|
1455
|
-
('pseudo_examination', models.ForeignKey(blank=True, help_text='FK to the pseudo-anonymized PatientExamination record.', null=True, on_delete=django.db.models.deletion.CASCADE, to='endoreg_db.patientexamination')),
|
|
1456
|
-
('pseudo_patient', models.ForeignKey(blank=True, help_text='FK to the pseudo-anonymized Patient record.', null=True, on_delete=django.db.models.deletion.CASCADE, to='endoreg_db.patient')),
|
|
1457
|
-
],
|
|
1458
|
-
),
|
|
1459
|
-
migrations.CreateModel(
|
|
1460
|
-
name='RawPdfFile',
|
|
1461
|
-
fields=[
|
|
1462
|
-
('id', models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name='ID')),
|
|
1463
|
-
('pdf_hash', models.CharField(max_length=255, unique=True)),
|
|
1464
|
-
('text', models.TextField(blank=True, null=True)),
|
|
1465
|
-
('date_created', models.DateTimeField(auto_now_add=True)),
|
|
1466
|
-
('date_modified', models.DateTimeField(auto_now=True)),
|
|
1467
|
-
('anonymized', models.BooleanField(default=False, help_text='True if the PDF has been anonymized.')),
|
|
1468
|
-
('file', models.FileField(upload_to='raw_pdfs', validators=[django.core.validators.FileExtensionValidator(allowed_extensions=['pdf'])])),
|
|
1469
|
-
('anonymized_file', models.FileField(blank=True, null=True, upload_to='raw_pdfs', validators=[django.core.validators.FileExtensionValidator(allowed_extensions=['pdf'])])),
|
|
1470
|
-
('state_report_processing_required', models.BooleanField(default=True)),
|
|
1471
|
-
('state_report_processed', models.BooleanField(default=False)),
|
|
1472
|
-
('raw_meta', models.JSONField(blank=True, null=True)),
|
|
1473
|
-
('anonymized_text', models.TextField(blank=True, null=True)),
|
|
1474
|
-
('anonym_examination_report', models.OneToOneField(blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, related_name='raw_pdf_file', to='endoreg_db.anonymexaminationreport')),
|
|
1475
|
-
('center', models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, to='endoreg_db.center')),
|
|
1476
|
-
('examination', models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, related_name='raw_pdf_files', to='endoreg_db.patientexamination')),
|
|
1477
|
-
('examiner', models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, to='endoreg_db.examiner')),
|
|
1478
|
-
('patient', models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, related_name='raw_pdf_files', to='endoreg_db.patient')),
|
|
1479
|
-
('pdf_type', models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, to='endoreg_db.pdftype')),
|
|
1480
|
-
('state', models.OneToOneField(blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, related_name='raw_pdf_file', to='endoreg_db.rawpdfstate')),
|
|
1481
|
-
('sensitive_meta', models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, related_name='raw_pdf_files', to='endoreg_db.sensitivemeta')),
|
|
1482
|
-
],
|
|
1483
|
-
),
|
|
1484
|
-
migrations.CreateModel(
|
|
1485
|
-
name='AnonymHistologyReport',
|
|
1486
|
-
fields=[
|
|
1487
|
-
('id', models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name='ID')),
|
|
1488
|
-
('meta', models.JSONField(blank=True, null=True)),
|
|
1489
|
-
('text', models.TextField(blank=True, null=True)),
|
|
1490
|
-
('date', models.DateField(blank=True, null=True)),
|
|
1491
|
-
('time', models.TimeField(blank=True, null=True)),
|
|
1492
|
-
('file', models.FileField(blank=True, null=True, upload_to=pathlib.PurePosixPath('pdfs'))),
|
|
1493
|
-
('center', models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, to='endoreg_db.center')),
|
|
1494
|
-
('type', models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, to='endoreg_db.documenttype')),
|
|
1495
|
-
('examiners', models.ManyToManyField(blank=True, to='endoreg_db.examiner')),
|
|
1496
|
-
('patient', models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.DO_NOTHING, to='endoreg_db.patient')),
|
|
1497
|
-
('patient_examination', models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, to='endoreg_db.patientexamination')),
|
|
1498
|
-
('sensitive_meta', models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, to='endoreg_db.sensitivemeta')),
|
|
1499
|
-
],
|
|
1500
|
-
options={
|
|
1501
|
-
'abstract': False,
|
|
1774
|
+
"abstract": False,
|
|
1502
1775
|
},
|
|
1503
1776
|
),
|
|
1504
1777
|
migrations.AddField(
|
|
1505
|
-
model_name=
|
|
1506
|
-
name=
|
|
1507
|
-
field=models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, to=
|
|
1778
|
+
model_name="anonymexaminationreport",
|
|
1779
|
+
name="sensitive_meta",
|
|
1780
|
+
field=models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, to="endoreg_db.sensitivemeta"),
|
|
1508
1781
|
),
|
|
1509
1782
|
migrations.CreateModel(
|
|
1510
|
-
name=
|
|
1783
|
+
name="SensitiveMetaState",
|
|
1511
1784
|
fields=[
|
|
1512
|
-
(
|
|
1513
|
-
(
|
|
1514
|
-
(
|
|
1515
|
-
(
|
|
1516
|
-
(
|
|
1517
|
-
(
|
|
1785
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1786
|
+
("created_at", models.DateTimeField(auto_now_add=True)),
|
|
1787
|
+
("updated_at", models.DateTimeField(auto_now=True)),
|
|
1788
|
+
("dob_verified", models.BooleanField(default=False)),
|
|
1789
|
+
("names_verified", models.BooleanField(default=False)),
|
|
1790
|
+
(
|
|
1791
|
+
"origin",
|
|
1792
|
+
models.OneToOneField(
|
|
1793
|
+
blank=True, null=True, on_delete=django.db.models.deletion.CASCADE, related_name="state", to="endoreg_db.sensitivemeta"
|
|
1794
|
+
),
|
|
1795
|
+
),
|
|
1518
1796
|
],
|
|
1519
1797
|
options={
|
|
1520
|
-
|
|
1521
|
-
|
|
1798
|
+
"verbose_name": "Sensitive Meta State",
|
|
1799
|
+
"verbose_name_plural": "Sensitive Meta States",
|
|
1522
1800
|
},
|
|
1523
1801
|
),
|
|
1524
1802
|
migrations.CreateModel(
|
|
1525
|
-
name=
|
|
1803
|
+
name="Shift",
|
|
1526
1804
|
fields=[
|
|
1527
|
-
(
|
|
1528
|
-
(
|
|
1529
|
-
(
|
|
1530
|
-
(
|
|
1531
|
-
(
|
|
1532
|
-
(
|
|
1805
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1806
|
+
("name", models.CharField(max_length=255, unique=True)),
|
|
1807
|
+
("description", models.TextField(blank=True, null=True)),
|
|
1808
|
+
("is_active", models.BooleanField(default=True)),
|
|
1809
|
+
("required_qualifications", models.ManyToManyField(related_name="shifts", to="endoreg_db.qualification")),
|
|
1810
|
+
("shift_types", models.ManyToManyField(related_name="shifts", to="endoreg_db.shifttype")),
|
|
1533
1811
|
],
|
|
1534
1812
|
),
|
|
1535
1813
|
migrations.CreateModel(
|
|
1536
|
-
name=
|
|
1814
|
+
name="CenterShift",
|
|
1537
1815
|
fields=[
|
|
1538
|
-
(
|
|
1539
|
-
(
|
|
1540
|
-
(
|
|
1541
|
-
(
|
|
1542
|
-
(
|
|
1543
|
-
(
|
|
1544
|
-
(
|
|
1545
|
-
(
|
|
1546
|
-
(
|
|
1816
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1817
|
+
("name", models.CharField(max_length=255, unique=True)),
|
|
1818
|
+
("description", models.TextField(blank=True, null=True)),
|
|
1819
|
+
("start_time", models.TimeField()),
|
|
1820
|
+
("end_time", models.TimeField()),
|
|
1821
|
+
("estimated_presence_fraction", models.DecimalField(decimal_places=4, default=Decimal("0"), max_digits=5)),
|
|
1822
|
+
("center", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name="center_shifts", to="endoreg_db.center")),
|
|
1823
|
+
("scheduled_days", models.ManyToManyField(related_name="center_shifts", to="endoreg_db.scheduleddays")),
|
|
1824
|
+
("shift", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name="center_shifts", to="endoreg_db.shift")),
|
|
1547
1825
|
],
|
|
1548
1826
|
),
|
|
1549
1827
|
migrations.CreateModel(
|
|
1550
|
-
name=
|
|
1828
|
+
name="RequirementSet",
|
|
1551
1829
|
fields=[
|
|
1552
|
-
(
|
|
1553
|
-
(
|
|
1554
|
-
(
|
|
1555
|
-
(
|
|
1556
|
-
(
|
|
1557
|
-
(
|
|
1558
|
-
(
|
|
1559
|
-
(
|
|
1560
|
-
|
|
1830
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1831
|
+
("name", models.CharField(max_length=100, unique=True)),
|
|
1832
|
+
("description", models.TextField(blank=True, null=True)),
|
|
1833
|
+
("information_sources", models.ManyToManyField(blank=True, related_name="requirement_sets", to="endoreg_db.informationsource")),
|
|
1834
|
+
("links_to_sets", models.ManyToManyField(blank=True, related_name="links_from_sets", to="endoreg_db.requirementset")),
|
|
1835
|
+
("reqset_exam_links", models.ManyToManyField(blank=True, related_name="requirement_set", to="endoreg_db.examinationrequirementset")),
|
|
1836
|
+
("requirements", models.ManyToManyField(blank=True, related_name="requirement_sets", to="endoreg_db.requirement")),
|
|
1837
|
+
(
|
|
1838
|
+
"requirement_set_type",
|
|
1839
|
+
models.ForeignKey(
|
|
1840
|
+
blank=True, null=True, on_delete=django.db.models.deletion.CASCADE, related_name="requirement_sets", to="endoreg_db.requirementsettype"
|
|
1841
|
+
),
|
|
1842
|
+
),
|
|
1843
|
+
("tags", models.ManyToManyField(blank=True, related_name="requirement_sets", to="endoreg_db.tag")),
|
|
1561
1844
|
],
|
|
1562
1845
|
),
|
|
1563
1846
|
migrations.CreateModel(
|
|
1564
|
-
name=
|
|
1847
|
+
name="TransportRoute",
|
|
1565
1848
|
fields=[
|
|
1566
|
-
(
|
|
1567
|
-
(
|
|
1568
|
-
(
|
|
1569
|
-
(
|
|
1570
|
-
(
|
|
1849
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1850
|
+
("distance", models.FloatField()),
|
|
1851
|
+
("name", models.CharField(max_length=255)),
|
|
1852
|
+
("emission_factor", models.ForeignKey(null=True, on_delete=django.db.models.deletion.SET_NULL, to="endoreg_db.emissionfactor")),
|
|
1853
|
+
("unit", models.ForeignKey(null=True, on_delete=django.db.models.deletion.SET_NULL, to="endoreg_db.unit")),
|
|
1571
1854
|
],
|
|
1572
1855
|
),
|
|
1573
1856
|
migrations.AddField(
|
|
1574
|
-
model_name=
|
|
1575
|
-
name=
|
|
1576
|
-
field=models.ForeignKey(null=True, on_delete=django.db.models.deletion.SET_NULL, to=
|
|
1857
|
+
model_name="product",
|
|
1858
|
+
name="transport_route",
|
|
1859
|
+
field=models.ForeignKey(null=True, on_delete=django.db.models.deletion.SET_NULL, to="endoreg_db.transportroute"),
|
|
1577
1860
|
),
|
|
1578
1861
|
migrations.CreateModel(
|
|
1579
|
-
name=
|
|
1862
|
+
name="ProductWeight",
|
|
1580
1863
|
fields=[
|
|
1581
|
-
(
|
|
1582
|
-
(
|
|
1583
|
-
(
|
|
1584
|
-
(
|
|
1585
|
-
(
|
|
1586
|
-
(
|
|
1587
|
-
(
|
|
1864
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1865
|
+
("name", models.CharField(max_length=255, null=True)),
|
|
1866
|
+
("measured", models.FloatField(null=True)),
|
|
1867
|
+
("verified", models.FloatField(null=True)),
|
|
1868
|
+
("manufacturer", models.FloatField(null=True)),
|
|
1869
|
+
("product", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, to="endoreg_db.product")),
|
|
1870
|
+
("unit", models.ForeignKey(null=True, on_delete=django.db.models.deletion.SET_NULL, to="endoreg_db.unit")),
|
|
1588
1871
|
],
|
|
1589
1872
|
),
|
|
1590
1873
|
migrations.CreateModel(
|
|
1591
|
-
name=
|
|
1874
|
+
name="ProductMaterial",
|
|
1592
1875
|
fields=[
|
|
1593
|
-
(
|
|
1594
|
-
(
|
|
1595
|
-
(
|
|
1596
|
-
(
|
|
1597
|
-
|
|
1598
|
-
|
|
1876
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1877
|
+
("component", models.CharField(max_length=255)),
|
|
1878
|
+
("quantity", models.FloatField()),
|
|
1879
|
+
(
|
|
1880
|
+
"material",
|
|
1881
|
+
models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name="material_product_materials", to="endoreg_db.material"),
|
|
1882
|
+
),
|
|
1883
|
+
("product", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name="product_product_materials", to="endoreg_db.product")),
|
|
1884
|
+
("unit", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name="unit_product_materials", to="endoreg_db.unit")),
|
|
1599
1885
|
],
|
|
1600
1886
|
),
|
|
1601
1887
|
migrations.CreateModel(
|
|
1602
|
-
name=
|
|
1888
|
+
name="PatientLabValue",
|
|
1603
1889
|
fields=[
|
|
1604
|
-
(
|
|
1605
|
-
(
|
|
1606
|
-
(
|
|
1607
|
-
(
|
|
1608
|
-
(
|
|
1609
|
-
(
|
|
1610
|
-
(
|
|
1611
|
-
|
|
1612
|
-
|
|
1890
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1891
|
+
("value", models.FloatField(blank=True, null=True)),
|
|
1892
|
+
("value_str", models.CharField(blank=True, max_length=255, null=True)),
|
|
1893
|
+
("datetime", models.DateTimeField(auto_now_add=True)),
|
|
1894
|
+
("normal_range", models.JSONField(default=dict)),
|
|
1895
|
+
("lab_value", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, to="endoreg_db.labvalue")),
|
|
1896
|
+
(
|
|
1897
|
+
"patient",
|
|
1898
|
+
models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.CASCADE, related_name="lab_values", to="endoreg_db.patient"),
|
|
1899
|
+
),
|
|
1900
|
+
(
|
|
1901
|
+
"sample",
|
|
1902
|
+
models.ForeignKey(
|
|
1903
|
+
blank=True, null=True, on_delete=django.db.models.deletion.CASCADE, related_name="values", to="endoreg_db.patientlabsample"
|
|
1904
|
+
),
|
|
1905
|
+
),
|
|
1906
|
+
("unit", models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.CASCADE, to="endoreg_db.unit")),
|
|
1613
1907
|
],
|
|
1614
1908
|
),
|
|
1615
1909
|
migrations.AddField(
|
|
1616
|
-
model_name=
|
|
1617
|
-
name=
|
|
1618
|
-
field=models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, to=
|
|
1910
|
+
model_name="medication",
|
|
1911
|
+
name="default_unit",
|
|
1912
|
+
field=models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, to="endoreg_db.unit"),
|
|
1619
1913
|
),
|
|
1620
1914
|
migrations.AddField(
|
|
1621
|
-
model_name=
|
|
1622
|
-
name=
|
|
1623
|
-
field=models.ForeignKey(null=True, on_delete=django.db.models.deletion.SET_NULL, to=
|
|
1624
|
-
),
|
|
1625
|
-
migrations.CreateModel(
|
|
1626
|
-
name=
|
|
1627
|
-
fields=[
|
|
1628
|
-
(
|
|
1629
|
-
(
|
|
1630
|
-
(
|
|
1631
|
-
(
|
|
1632
|
-
(
|
|
1633
|
-
(
|
|
1634
|
-
|
|
1635
|
-
|
|
1636
|
-
|
|
1637
|
-
|
|
1638
|
-
|
|
1639
|
-
|
|
1640
|
-
|
|
1641
|
-
|
|
1642
|
-
(
|
|
1643
|
-
|
|
1644
|
-
|
|
1645
|
-
|
|
1646
|
-
|
|
1647
|
-
|
|
1648
|
-
|
|
1649
|
-
|
|
1915
|
+
model_name="emissionfactor",
|
|
1916
|
+
name="unit",
|
|
1917
|
+
field=models.ForeignKey(null=True, on_delete=django.db.models.deletion.SET_NULL, to="endoreg_db.unit"),
|
|
1918
|
+
),
|
|
1919
|
+
migrations.CreateModel(
|
|
1920
|
+
name="CenterResource",
|
|
1921
|
+
fields=[
|
|
1922
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1923
|
+
("name", models.CharField(max_length=255, null=True)),
|
|
1924
|
+
("quantity", models.FloatField()),
|
|
1925
|
+
("year", models.IntegerField()),
|
|
1926
|
+
("center", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name="center_resources", to="endoreg_db.center")),
|
|
1927
|
+
(
|
|
1928
|
+
"transport_emission_factor",
|
|
1929
|
+
models.ForeignKey(
|
|
1930
|
+
null=True,
|
|
1931
|
+
on_delete=django.db.models.deletion.SET_NULL,
|
|
1932
|
+
related_name="center_resource_transport_emission_factor",
|
|
1933
|
+
to="endoreg_db.emissionfactor",
|
|
1934
|
+
),
|
|
1935
|
+
),
|
|
1936
|
+
(
|
|
1937
|
+
"use_emission_factor",
|
|
1938
|
+
models.ForeignKey(
|
|
1939
|
+
null=True,
|
|
1940
|
+
on_delete=django.db.models.deletion.SET_NULL,
|
|
1941
|
+
related_name="center_resource_use_emission_factor",
|
|
1942
|
+
to="endoreg_db.emissionfactor",
|
|
1943
|
+
),
|
|
1944
|
+
),
|
|
1945
|
+
("resource", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, to="endoreg_db.resource")),
|
|
1946
|
+
("unit", models.ForeignKey(null=True, on_delete=django.db.models.deletion.SET_NULL, to="endoreg_db.unit")),
|
|
1947
|
+
],
|
|
1948
|
+
),
|
|
1949
|
+
migrations.CreateModel(
|
|
1950
|
+
name="UploadJob",
|
|
1951
|
+
fields=[
|
|
1952
|
+
(
|
|
1953
|
+
"id",
|
|
1954
|
+
models.UUIDField(default=uuid.uuid4, editable=False, help_text="Unique identifier for the upload job", primary_key=True, serialize=False),
|
|
1955
|
+
),
|
|
1956
|
+
("file", models.FileField(help_text="Uploaded file (PDF or video)", upload_to="uploads/%Y/%m/%d/")),
|
|
1957
|
+
(
|
|
1958
|
+
"status",
|
|
1959
|
+
models.CharField(
|
|
1960
|
+
choices=[("pending", "Pending"), ("processing", "Processing"), ("anonymized", "Anonymized"), ("error", "Error")],
|
|
1961
|
+
default="pending",
|
|
1962
|
+
help_text="Current processing status of the upload",
|
|
1963
|
+
max_length=20,
|
|
1964
|
+
),
|
|
1965
|
+
),
|
|
1966
|
+
("content_type", models.CharField(blank=True, help_text="MIME type of the uploaded file", max_length=100)),
|
|
1967
|
+
("error_detail", models.TextField(blank=True, help_text="Error message if processing failed")),
|
|
1968
|
+
("created_at", models.DateTimeField(auto_now_add=True, help_text="When the upload job was created")),
|
|
1969
|
+
("updated_at", models.DateTimeField(auto_now=True, help_text="When the upload job was last updated")),
|
|
1970
|
+
(
|
|
1971
|
+
"sensitive_meta",
|
|
1972
|
+
models.ForeignKey(
|
|
1973
|
+
blank=True,
|
|
1974
|
+
help_text="Link to the created SensitiveMeta record after processing",
|
|
1975
|
+
null=True,
|
|
1976
|
+
on_delete=django.db.models.deletion.SET_NULL,
|
|
1977
|
+
to="endoreg_db.sensitivemeta",
|
|
1978
|
+
),
|
|
1979
|
+
),
|
|
1650
1980
|
],
|
|
1651
1981
|
options={
|
|
1652
|
-
|
|
1653
|
-
|
|
1654
|
-
|
|
1982
|
+
"verbose_name": "Upload Job",
|
|
1983
|
+
"verbose_name_plural": "Upload Jobs",
|
|
1984
|
+
"ordering": ["-created_at"],
|
|
1655
1985
|
},
|
|
1656
1986
|
),
|
|
1657
1987
|
migrations.CreateModel(
|
|
1658
|
-
name=
|
|
1659
|
-
fields=[
|
|
1660
|
-
(
|
|
1661
|
-
(
|
|
1662
|
-
(
|
|
1663
|
-
|
|
1664
|
-
|
|
1665
|
-
|
|
1666
|
-
|
|
1667
|
-
|
|
1668
|
-
(
|
|
1669
|
-
|
|
1670
|
-
|
|
1671
|
-
|
|
1672
|
-
|
|
1673
|
-
|
|
1674
|
-
(
|
|
1675
|
-
(
|
|
1676
|
-
|
|
1677
|
-
|
|
1678
|
-
|
|
1679
|
-
(
|
|
1680
|
-
(
|
|
1681
|
-
(
|
|
1682
|
-
(
|
|
1683
|
-
(
|
|
1684
|
-
(
|
|
1685
|
-
(
|
|
1686
|
-
(
|
|
1988
|
+
name="VideoFile",
|
|
1989
|
+
fields=[
|
|
1990
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
1991
|
+
("uuid", models.UUIDField(default=uuid.uuid4, editable=False, unique=True)),
|
|
1992
|
+
(
|
|
1993
|
+
"raw_file",
|
|
1994
|
+
models.FileField(
|
|
1995
|
+
blank=True, null=True, upload_to="videos", validators=[django.core.validators.FileExtensionValidator(allowed_extensions=["mp4"])]
|
|
1996
|
+
),
|
|
1997
|
+
),
|
|
1998
|
+
(
|
|
1999
|
+
"processed_file",
|
|
2000
|
+
models.FileField(
|
|
2001
|
+
blank=True, null=True, upload_to="videos", validators=[django.core.validators.FileExtensionValidator(allowed_extensions=["mp4"])]
|
|
2002
|
+
),
|
|
2003
|
+
),
|
|
2004
|
+
("video_hash", models.CharField(help_text="Hash of the raw video file.", max_length=255, unique=True)),
|
|
2005
|
+
(
|
|
2006
|
+
"processed_video_hash",
|
|
2007
|
+
models.CharField(blank=True, help_text="Hash of the processed video file, unique if not null.", max_length=255, null=True, unique=True),
|
|
2008
|
+
),
|
|
2009
|
+
("original_file_name", models.CharField(blank=True, max_length=255, null=True)),
|
|
2010
|
+
("uploaded_at", models.DateTimeField(auto_now_add=True)),
|
|
2011
|
+
("frame_dir", models.CharField(blank=True, help_text="Path to frames extracted from the raw video.", max_length=512)),
|
|
2012
|
+
("fps", models.FloatField(blank=True, null=True)),
|
|
2013
|
+
("duration", models.FloatField(blank=True, null=True)),
|
|
2014
|
+
("frame_count", models.IntegerField(blank=True, null=True)),
|
|
2015
|
+
("width", models.IntegerField(blank=True, null=True)),
|
|
2016
|
+
("height", models.IntegerField(blank=True, null=True)),
|
|
2017
|
+
("suffix", models.CharField(blank=True, max_length=10, null=True)),
|
|
2018
|
+
("sequences", models.JSONField(blank=True, default=dict, help_text="AI prediction sequences based on raw frames.")),
|
|
2019
|
+
("date", models.DateField(blank=True, null=True)),
|
|
2020
|
+
("meta", models.JSONField(blank=True, null=True)),
|
|
2021
|
+
("date_created", models.DateTimeField(auto_now_add=True)),
|
|
2022
|
+
("date_modified", models.DateTimeField(auto_now=True)),
|
|
2023
|
+
("ai_model_meta", models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, to="endoreg_db.modelmeta")),
|
|
2024
|
+
("center", models.ForeignKey(on_delete=django.db.models.deletion.PROTECT, to="endoreg_db.center")),
|
|
2025
|
+
(
|
|
2026
|
+
"examination",
|
|
2027
|
+
models.ForeignKey(
|
|
2028
|
+
blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, related_name="video_files", to="endoreg_db.patientexamination"
|
|
2029
|
+
),
|
|
2030
|
+
),
|
|
2031
|
+
(
|
|
2032
|
+
"patient",
|
|
2033
|
+
models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, related_name="video_files", to="endoreg_db.patient"),
|
|
2034
|
+
),
|
|
2035
|
+
("processor", models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.PROTECT, to="endoreg_db.endoscopyprocessor")),
|
|
2036
|
+
(
|
|
2037
|
+
"sensitive_meta",
|
|
2038
|
+
models.OneToOneField(
|
|
2039
|
+
blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, related_name="video_file", to="endoreg_db.sensitivemeta"
|
|
2040
|
+
),
|
|
2041
|
+
),
|
|
2042
|
+
("import_meta", models.OneToOneField(blank=True, null=True, on_delete=django.db.models.deletion.CASCADE, to="endoreg_db.videoimportmeta")),
|
|
1687
2043
|
],
|
|
1688
2044
|
),
|
|
1689
2045
|
migrations.AddField(
|
|
1690
|
-
model_name=
|
|
1691
|
-
name=
|
|
1692
|
-
field=models.OneToOneField(
|
|
2046
|
+
model_name="patientexamination",
|
|
2047
|
+
name="video",
|
|
2048
|
+
field=models.OneToOneField(
|
|
2049
|
+
blank=True, null=True, on_delete=django.db.models.deletion.CASCADE, related_name="patient_examination", to="endoreg_db.videofile"
|
|
2050
|
+
),
|
|
1693
2051
|
),
|
|
1694
2052
|
migrations.AddField(
|
|
1695
|
-
model_name=
|
|
1696
|
-
name=
|
|
1697
|
-
field=models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name=
|
|
2053
|
+
model_name="labelvideosegment",
|
|
2054
|
+
name="video_file",
|
|
2055
|
+
field=models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name="label_video_segments", to="endoreg_db.videofile"),
|
|
1698
2056
|
),
|
|
1699
2057
|
migrations.CreateModel(
|
|
1700
|
-
name=
|
|
2058
|
+
name="Frame",
|
|
1701
2059
|
fields=[
|
|
1702
|
-
(
|
|
1703
|
-
(
|
|
1704
|
-
(
|
|
1705
|
-
(
|
|
1706
|
-
(
|
|
1707
|
-
(
|
|
2060
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
2061
|
+
("frame_number", models.PositiveIntegerField()),
|
|
2062
|
+
("relative_path", models.CharField(max_length=512)),
|
|
2063
|
+
("timestamp", models.FloatField(blank=True, null=True)),
|
|
2064
|
+
("is_extracted", models.BooleanField(default=False)),
|
|
2065
|
+
("video", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name="frames", to="endoreg_db.videofile")),
|
|
1708
2066
|
],
|
|
1709
2067
|
options={
|
|
1710
|
-
|
|
2068
|
+
"ordering": ["video", "frame_number"],
|
|
1711
2069
|
},
|
|
1712
2070
|
),
|
|
1713
2071
|
migrations.CreateModel(
|
|
1714
|
-
name=
|
|
2072
|
+
name="VideoMeta",
|
|
1715
2073
|
fields=[
|
|
1716
|
-
(
|
|
1717
|
-
(
|
|
1718
|
-
(
|
|
1719
|
-
(
|
|
1720
|
-
(
|
|
1721
|
-
(
|
|
2074
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
2075
|
+
("center", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, to="endoreg_db.center")),
|
|
2076
|
+
("endoscope", models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.CASCADE, to="endoreg_db.endoscope")),
|
|
2077
|
+
("ffmpeg_meta", models.OneToOneField(blank=True, null=True, on_delete=django.db.models.deletion.CASCADE, to="endoreg_db.ffmpegmeta")),
|
|
2078
|
+
("import_meta", models.OneToOneField(blank=True, null=True, on_delete=django.db.models.deletion.CASCADE, to="endoreg_db.videoimportmeta")),
|
|
2079
|
+
("processor", models.ForeignKey(blank=True, null=True, on_delete=django.db.models.deletion.CASCADE, to="endoreg_db.endoscopyprocessor")),
|
|
1722
2080
|
],
|
|
1723
2081
|
),
|
|
1724
2082
|
migrations.AddField(
|
|
1725
|
-
model_name=
|
|
1726
|
-
name=
|
|
1727
|
-
field=models.OneToOneField(
|
|
2083
|
+
model_name="videofile",
|
|
2084
|
+
name="video_meta",
|
|
2085
|
+
field=models.OneToOneField(
|
|
2086
|
+
blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, related_name="video_file", to="endoreg_db.videometa"
|
|
2087
|
+
),
|
|
2088
|
+
),
|
|
2089
|
+
migrations.CreateModel(
|
|
2090
|
+
name="VideoMetadata",
|
|
2091
|
+
fields=[
|
|
2092
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
2093
|
+
(
|
|
2094
|
+
"sensitive_frame_count",
|
|
2095
|
+
models.IntegerField(blank=True, help_text="Number of frames detected as containing sensitive information", null=True),
|
|
2096
|
+
),
|
|
2097
|
+
("sensitive_ratio", models.FloatField(blank=True, help_text="Ratio of sensitive frames to total frames (0.0-1.0)", null=True)),
|
|
2098
|
+
("sensitive_frame_ids", models.TextField(blank=True, help_text="JSON array of sensitive frame indices (0-based)", null=True)),
|
|
2099
|
+
("analyzed_at", models.DateTimeField(auto_now=True, help_text="Timestamp of last analysis")),
|
|
2100
|
+
(
|
|
2101
|
+
"video",
|
|
2102
|
+
models.OneToOneField(
|
|
2103
|
+
help_text="Video file this metadata belongs to",
|
|
2104
|
+
on_delete=django.db.models.deletion.CASCADE,
|
|
2105
|
+
related_name="metadata",
|
|
2106
|
+
to="endoreg_db.videofile",
|
|
2107
|
+
),
|
|
2108
|
+
),
|
|
2109
|
+
],
|
|
2110
|
+
options={
|
|
2111
|
+
"verbose_name": "Video Metadata",
|
|
2112
|
+
"verbose_name_plural": "Video Metadata",
|
|
2113
|
+
"db_table": "video_metadata",
|
|
2114
|
+
},
|
|
1728
2115
|
),
|
|
1729
2116
|
migrations.CreateModel(
|
|
1730
|
-
name=
|
|
2117
|
+
name="VideoPredictionMeta",
|
|
1731
2118
|
fields=[
|
|
1732
|
-
(
|
|
1733
|
-
(
|
|
1734
|
-
(
|
|
1735
|
-
(
|
|
1736
|
-
(
|
|
1737
|
-
(
|
|
2119
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
2120
|
+
("date_created", models.DateTimeField(auto_now_add=True)),
|
|
2121
|
+
("date_modified", models.DateTimeField(auto_now=True)),
|
|
2122
|
+
("prediction_array", models.BinaryField(blank=True, null=True)),
|
|
2123
|
+
("model_meta", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, to="endoreg_db.modelmeta")),
|
|
2124
|
+
("video_file", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name="video_prediction_meta", to="endoreg_db.videofile")),
|
|
1738
2125
|
],
|
|
1739
2126
|
),
|
|
1740
2127
|
migrations.AddField(
|
|
1741
|
-
model_name=
|
|
1742
|
-
name=
|
|
1743
|
-
field=models.ForeignKey(
|
|
2128
|
+
model_name="labelvideosegment",
|
|
2129
|
+
name="prediction_meta",
|
|
2130
|
+
field=models.ForeignKey(
|
|
2131
|
+
blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, related_name="label_video_segments", to="endoreg_db.videopredictionmeta"
|
|
2132
|
+
),
|
|
2133
|
+
),
|
|
2134
|
+
migrations.CreateModel(
|
|
2135
|
+
name="VideoProcessingHistory",
|
|
2136
|
+
fields=[
|
|
2137
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
2138
|
+
(
|
|
2139
|
+
"operation",
|
|
2140
|
+
models.CharField(
|
|
2141
|
+
choices=[
|
|
2142
|
+
("mask_overlay", "Mask Overlay"),
|
|
2143
|
+
("frame_removal", "Frame Removal"),
|
|
2144
|
+
("analysis", "Sensitivity Analysis"),
|
|
2145
|
+
("reprocessing", "Full Reprocessing"),
|
|
2146
|
+
],
|
|
2147
|
+
help_text="Type of processing operation",
|
|
2148
|
+
max_length=50,
|
|
2149
|
+
),
|
|
2150
|
+
),
|
|
2151
|
+
(
|
|
2152
|
+
"status",
|
|
2153
|
+
models.CharField(
|
|
2154
|
+
choices=[("pending", "Pending"), ("running", "Running"), ("success", "Success"), ("failure", "Failure"), ("cancelled", "Cancelled")],
|
|
2155
|
+
default="pending",
|
|
2156
|
+
help_text="Current status of the operation",
|
|
2157
|
+
max_length=20,
|
|
2158
|
+
),
|
|
2159
|
+
),
|
|
2160
|
+
("config", models.JSONField(default=dict, help_text="Operation configuration (mask settings, frame list, etc.)")),
|
|
2161
|
+
("output_file", models.CharField(blank=True, help_text="Path to output file (relative to MEDIA_ROOT)", max_length=500)),
|
|
2162
|
+
("details", models.TextField(blank=True, help_text="Additional details or error messages")),
|
|
2163
|
+
("task_id", models.CharField(blank=True, help_text="Celery task ID for progress tracking", max_length=100)),
|
|
2164
|
+
("created_at", models.DateTimeField(auto_now_add=True, help_text="When the operation was started")),
|
|
2165
|
+
("completed_at", models.DateTimeField(blank=True, help_text="When the operation completed (success or failure)", null=True)),
|
|
2166
|
+
(
|
|
2167
|
+
"video",
|
|
2168
|
+
models.ForeignKey(
|
|
2169
|
+
help_text="Video file this operation was performed on",
|
|
2170
|
+
on_delete=django.db.models.deletion.CASCADE,
|
|
2171
|
+
related_name="processing_history",
|
|
2172
|
+
to="endoreg_db.videofile",
|
|
2173
|
+
),
|
|
2174
|
+
),
|
|
2175
|
+
],
|
|
2176
|
+
options={
|
|
2177
|
+
"verbose_name": "Video Processing History",
|
|
2178
|
+
"verbose_name_plural": "Video Processing Histories",
|
|
2179
|
+
"db_table": "video_processing_history",
|
|
2180
|
+
"ordering": ["-created_at"],
|
|
2181
|
+
},
|
|
1744
2182
|
),
|
|
1745
2183
|
migrations.CreateModel(
|
|
1746
|
-
name=
|
|
2184
|
+
name="VideoSegmentationAnnotation",
|
|
1747
2185
|
fields=[
|
|
1748
|
-
(
|
|
1749
|
-
(
|
|
1750
|
-
(
|
|
1751
|
-
(
|
|
1752
|
-
(
|
|
1753
|
-
|
|
2186
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
2187
|
+
("start_time", models.FloatField()),
|
|
2188
|
+
("stop_time", models.FloatField()),
|
|
2189
|
+
("is_true", models.BooleanField(default=True)),
|
|
2190
|
+
(
|
|
2191
|
+
"video_file",
|
|
2192
|
+
models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name="video_segmentation_annotations", to="endoreg_db.videofile"),
|
|
2193
|
+
),
|
|
2194
|
+
("label", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, to="endoreg_db.videosegmentationlabel")),
|
|
1754
2195
|
],
|
|
1755
2196
|
),
|
|
1756
2197
|
migrations.CreateModel(
|
|
1757
|
-
name=
|
|
2198
|
+
name="VideoSegmentationLabelSet",
|
|
1758
2199
|
fields=[
|
|
1759
|
-
(
|
|
1760
|
-
(
|
|
1761
|
-
(
|
|
1762
|
-
(
|
|
2200
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
2201
|
+
("name", models.CharField(max_length=255)),
|
|
2202
|
+
("description", models.TextField(blank=True, null=True)),
|
|
2203
|
+
("labels", models.ManyToManyField(related_name="labelsets", to="endoreg_db.videosegmentationlabel")),
|
|
1763
2204
|
],
|
|
1764
2205
|
),
|
|
1765
2206
|
migrations.AddField(
|
|
1766
|
-
model_name=
|
|
1767
|
-
name=
|
|
1768
|
-
field=models.ForeignKey(
|
|
2207
|
+
model_name="aimodel",
|
|
2208
|
+
name="video_segmentation_labelset",
|
|
2209
|
+
field=models.ForeignKey(
|
|
2210
|
+
blank=True, null=True, on_delete=django.db.models.deletion.CASCADE, related_name="ai_models", to="endoreg_db.videosegmentationlabelset"
|
|
2211
|
+
),
|
|
1769
2212
|
),
|
|
1770
2213
|
migrations.AddField(
|
|
1771
|
-
model_name=
|
|
1772
|
-
name=
|
|
1773
|
-
field=models.OneToOneField(
|
|
1774
|
-
|
|
1775
|
-
|
|
1776
|
-
|
|
1777
|
-
|
|
1778
|
-
|
|
1779
|
-
|
|
1780
|
-
(
|
|
1781
|
-
(
|
|
1782
|
-
(
|
|
1783
|
-
(
|
|
1784
|
-
(
|
|
1785
|
-
|
|
1786
|
-
|
|
1787
|
-
|
|
1788
|
-
|
|
1789
|
-
|
|
1790
|
-
|
|
1791
|
-
|
|
1792
|
-
(
|
|
1793
|
-
(
|
|
1794
|
-
(
|
|
1795
|
-
(
|
|
1796
|
-
(
|
|
1797
|
-
(
|
|
1798
|
-
(
|
|
1799
|
-
|
|
2214
|
+
model_name="videofile",
|
|
2215
|
+
name="state",
|
|
2216
|
+
field=models.OneToOneField(
|
|
2217
|
+
blank=True, null=True, on_delete=django.db.models.deletion.SET_NULL, related_name="video_file", to="endoreg_db.videostate"
|
|
2218
|
+
),
|
|
2219
|
+
),
|
|
2220
|
+
migrations.CreateModel(
|
|
2221
|
+
name="CenterWaste",
|
|
2222
|
+
fields=[
|
|
2223
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
2224
|
+
("year", models.IntegerField()),
|
|
2225
|
+
("quantity", models.FloatField()),
|
|
2226
|
+
("center", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name="center_wastes", to="endoreg_db.center")),
|
|
2227
|
+
("emission_factor", models.ForeignKey(null=True, on_delete=django.db.models.deletion.SET_NULL, to="endoreg_db.emissionfactor")),
|
|
2228
|
+
("unit", models.ForeignKey(null=True, on_delete=django.db.models.deletion.SET_NULL, to="endoreg_db.unit")),
|
|
2229
|
+
("waste", models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, to="endoreg_db.waste")),
|
|
2230
|
+
],
|
|
2231
|
+
),
|
|
2232
|
+
migrations.CreateModel(
|
|
2233
|
+
name="ImageClassificationAnnotation",
|
|
2234
|
+
fields=[
|
|
2235
|
+
("id", models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name="ID")),
|
|
2236
|
+
("value", models.BooleanField()),
|
|
2237
|
+
("float_value", models.FloatField(blank=True, null=True)),
|
|
2238
|
+
("annotator", models.CharField(blank=True, max_length=255, null=True)),
|
|
2239
|
+
("date_created", models.DateTimeField(auto_now_add=True)),
|
|
2240
|
+
("date_modified", models.DateTimeField(auto_now=True)),
|
|
2241
|
+
(
|
|
2242
|
+
"frame",
|
|
2243
|
+
models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name="image_classification_annotations", to="endoreg_db.frame"),
|
|
2244
|
+
),
|
|
2245
|
+
(
|
|
2246
|
+
"information_source",
|
|
2247
|
+
models.ForeignKey(
|
|
2248
|
+
blank=True,
|
|
2249
|
+
default=None,
|
|
2250
|
+
null=True,
|
|
2251
|
+
on_delete=django.db.models.deletion.SET_NULL,
|
|
2252
|
+
related_name="image_classification_annotations",
|
|
2253
|
+
to="endoreg_db.informationsource",
|
|
2254
|
+
),
|
|
2255
|
+
),
|
|
2256
|
+
(
|
|
2257
|
+
"label",
|
|
2258
|
+
models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name="image_classification_annotations", to="endoreg_db.label"),
|
|
2259
|
+
),
|
|
2260
|
+
(
|
|
2261
|
+
"model_meta",
|
|
2262
|
+
models.ForeignKey(
|
|
2263
|
+
blank=True,
|
|
2264
|
+
default=None,
|
|
2265
|
+
null=True,
|
|
2266
|
+
on_delete=django.db.models.deletion.SET_NULL,
|
|
2267
|
+
related_name="image_classification_annotations",
|
|
2268
|
+
to="endoreg_db.modelmeta",
|
|
2269
|
+
),
|
|
2270
|
+
),
|
|
1800
2271
|
],
|
|
1801
2272
|
options={
|
|
1802
|
-
|
|
2273
|
+
"indexes": [
|
|
2274
|
+
models.Index(fields=["frame", "label"], name="endoreg_db__frame_i_47f916_idx"),
|
|
2275
|
+
models.Index(fields=["frame"], name="endoreg_db__frame_i_92c75a_idx"),
|
|
2276
|
+
],
|
|
1803
2277
|
},
|
|
1804
2278
|
),
|
|
2279
|
+
migrations.AddConstraint(
|
|
2280
|
+
model_name="patientexternalid",
|
|
2281
|
+
constraint=models.UniqueConstraint(fields=("origin", "external_id"), name="uniq_patient_external_id_per_origin"),
|
|
2282
|
+
),
|
|
1805
2283
|
migrations.AddIndex(
|
|
1806
|
-
model_name=
|
|
1807
|
-
index=models.Index(fields=[
|
|
2284
|
+
model_name="patientfinding",
|
|
2285
|
+
index=models.Index(fields=["patient_examination", "finding"], name="endoreg_db__patient_54869f_idx"),
|
|
1808
2286
|
),
|
|
1809
2287
|
migrations.AddIndex(
|
|
1810
|
-
model_name=
|
|
1811
|
-
index=models.Index(fields=[
|
|
2288
|
+
model_name="patientfinding",
|
|
2289
|
+
index=models.Index(fields=["patient_examination", "is_active"], name="endoreg_db__patient_9359f8_idx"),
|
|
1812
2290
|
),
|
|
1813
2291
|
migrations.AddIndex(
|
|
1814
|
-
model_name=
|
|
1815
|
-
index=models.Index(fields=[
|
|
2292
|
+
model_name="patientfinding",
|
|
2293
|
+
index=models.Index(fields=["created_at"], name="endoreg_db__created_b44d86_idx"),
|
|
1816
2294
|
),
|
|
1817
2295
|
migrations.AddIndex(
|
|
1818
|
-
model_name=
|
|
1819
|
-
index=models.Index(fields=[
|
|
2296
|
+
model_name="patientfinding",
|
|
2297
|
+
index=models.Index(fields=["finding", "is_active"], name="endoreg_db__finding_2f036b_idx"),
|
|
1820
2298
|
),
|
|
1821
2299
|
migrations.AddConstraint(
|
|
1822
|
-
model_name=
|
|
1823
|
-
constraint=models.UniqueConstraint(
|
|
2300
|
+
model_name="patientfinding",
|
|
2301
|
+
constraint=models.UniqueConstraint(
|
|
2302
|
+
condition=models.Q(("is_active", True)), fields=("patient_examination", "finding"), name="unique_active_finding_per_examination"
|
|
2303
|
+
),
|
|
1824
2304
|
),
|
|
1825
2305
|
migrations.AddConstraint(
|
|
1826
|
-
model_name=
|
|
1827
|
-
constraint=models.CheckConstraint(
|
|
2306
|
+
model_name="patientfinding",
|
|
2307
|
+
constraint=models.CheckConstraint(
|
|
2308
|
+
check=models.Q(
|
|
2309
|
+
models.Q(("deactivated_at__isnull", True), ("deactivated_by__isnull", True)),
|
|
2310
|
+
models.Q(("deactivated_at__isnull", False), ("deactivated_by__isnull", False), ("is_active", False)),
|
|
2311
|
+
_connector="OR",
|
|
2312
|
+
),
|
|
2313
|
+
name="deactivation_fields_consistency",
|
|
2314
|
+
),
|
|
1828
2315
|
),
|
|
1829
2316
|
migrations.AlterUniqueTogether(
|
|
1830
|
-
name=
|
|
1831
|
-
unique_together={(
|
|
2317
|
+
name="frame",
|
|
2318
|
+
unique_together={("video", "frame_number")},
|
|
1832
2319
|
),
|
|
1833
2320
|
migrations.AddIndex(
|
|
1834
|
-
model_name=
|
|
1835
|
-
index=models.Index(fields=[
|
|
2321
|
+
model_name="videopredictionmeta",
|
|
2322
|
+
index=models.Index(fields=["model_meta", "video_file"], name="endoreg_db__model_m_208dee_idx"),
|
|
1836
2323
|
),
|
|
1837
2324
|
migrations.AddConstraint(
|
|
1838
|
-
model_name=
|
|
1839
|
-
constraint=models.UniqueConstraint(fields=(
|
|
2325
|
+
model_name="videopredictionmeta",
|
|
2326
|
+
constraint=models.UniqueConstraint(fields=("model_meta", "video_file"), name="unique_prediction_per_video_model"),
|
|
1840
2327
|
),
|
|
1841
2328
|
migrations.AddIndex(
|
|
1842
|
-
model_name=
|
|
1843
|
-
index=models.Index(fields=[
|
|
2329
|
+
model_name="labelvideosegment",
|
|
2330
|
+
index=models.Index(fields=["video_file", "label", "start_frame_number"], name="endoreg_db__video_f_fa9326_idx"),
|
|
1844
2331
|
),
|
|
1845
2332
|
migrations.AddIndex(
|
|
1846
|
-
model_name=
|
|
1847
|
-
index=models.Index(fields=[
|
|
2333
|
+
model_name="labelvideosegment",
|
|
2334
|
+
index=models.Index(fields=["prediction_meta", "label"], name="endoreg_db__predict_2bfba4_idx"),
|
|
1848
2335
|
),
|
|
1849
2336
|
migrations.AddConstraint(
|
|
1850
|
-
model_name=
|
|
1851
|
-
constraint=models.CheckConstraint(
|
|
2337
|
+
model_name="labelvideosegment",
|
|
2338
|
+
constraint=models.CheckConstraint(check=models.Q(("start_frame_number__lt", models.F("end_frame_number"))), name="segment_start_lt_end"),
|
|
2339
|
+
),
|
|
2340
|
+
migrations.AddIndex(
|
|
2341
|
+
model_name="videoprocessinghistory",
|
|
2342
|
+
index=models.Index(fields=["video", "-created_at"], name="video_proce_video_i_98ffe0_idx"),
|
|
2343
|
+
),
|
|
2344
|
+
migrations.AddIndex(
|
|
2345
|
+
model_name="videoprocessinghistory",
|
|
2346
|
+
index=models.Index(fields=["task_id"], name="video_proce_task_id_ec8b15_idx"),
|
|
2347
|
+
),
|
|
2348
|
+
migrations.AddIndex(
|
|
2349
|
+
model_name="videoprocessinghistory",
|
|
2350
|
+
index=models.Index(fields=["status"], name="video_proce_status_6f71fd_idx"),
|
|
1852
2351
|
),
|
|
1853
2352
|
migrations.AddConstraint(
|
|
1854
|
-
model_name=
|
|
1855
|
-
constraint=models.CheckConstraint(
|
|
2353
|
+
model_name="videosegmentationannotation",
|
|
2354
|
+
constraint=models.CheckConstraint(check=models.Q(("start_time__lt", models.F("stop_time"))), name="start_time_less_than_stop_time"),
|
|
1856
2355
|
),
|
|
1857
2356
|
]
|