enbid-ananke 0.3.0__cp310-cp310-manylinux_2_39_x86_64.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- .cpython-310-x86_64-linux-gnu.so +0 -0
- enbid_ananke/Enbid-2.0/.DS_Store +0 -0
- enbid_ananke/Enbid-2.0/COPYING +341 -0
- enbid_ananke/Enbid-2.0/COPYRIGHT +18 -0
- enbid_ananke/Enbid-2.0/Documentation/enbid.pdf +0 -0
- enbid_ananke/Enbid-2.0/Documentation/users-guide.pdf +0 -0
- enbid_ananke/Enbid-2.0/Documentation/users-guide.tex +679 -0
- enbid_ananke/Enbid-2.0/Documentation/users-guide.tex.flc +4 -0
- enbid_ananke/Enbid-2.0/Enbid +0 -0
- enbid_ananke/Enbid-2.0/Examples/hernquist1_small/snapshot_ici +0 -0
- enbid_ananke/Enbid-2.0/Examples/hernquist1_small/snapshot_ici_typelist +2 -0
- enbid_ananke/Enbid-2.0/Examples/uniform_6d_box_4/snapshot_ici +0 -0
- enbid_ananke/Enbid-2.0/Examples/uniform_6d_box_4/snapshot_ici_3d.ascii +10000 -0
- enbid_ananke/Enbid-2.0/Examples/uniform_6d_box_4/snapshot_ici_6d.ascii +10000 -0
- enbid_ananke/Enbid-2.0/parameterfiles/myparameterfile1 +37 -0
- enbid_ananke/Enbid-2.0/parameterfiles/myparameterfile2 +37 -0
- enbid_ananke/Enbid-2.0/parameterfiles/myparameterfile3 +37 -0
- enbid_ananke/Enbid-2.0/parameterfiles/myparameterfile4 +37 -0
- enbid_ananke/Enbid-2.0/periodic_lengths.txt +5 -0
- enbid_ananke/Enbid-2.0/src/Makefile +43 -0
- enbid_ananke/Enbid-2.0/src/allocate.cpp +47 -0
- enbid_ananke/Enbid-2.0/src/allocate.o +0 -0
- enbid_ananke/Enbid-2.0/src/allvars.cpp +62 -0
- enbid_ananke/Enbid-2.0/src/allvars.h +263 -0
- enbid_ananke/Enbid-2.0/src/allvars.o +0 -0
- enbid_ananke/Enbid-2.0/src/begrun.cpp +361 -0
- enbid_ananke/Enbid-2.0/src/begrun.o +0 -0
- enbid_ananke/Enbid-2.0/src/density_nd.cpp +130 -0
- enbid_ananke/Enbid-2.0/src/density_nd.o +0 -0
- enbid_ananke/Enbid-2.0/src/functions.cpp +256 -0
- enbid_ananke/Enbid-2.0/src/functions.h +20 -0
- enbid_ananke/Enbid-2.0/src/functions.o +0 -0
- enbid_ananke/Enbid-2.0/src/init.cpp +299 -0
- enbid_ananke/Enbid-2.0/src/init.o +0 -0
- enbid_ananke/Enbid-2.0/src/io.cpp +255 -0
- enbid_ananke/Enbid-2.0/src/io.o +0 -0
- enbid_ananke/Enbid-2.0/src/main.cpp +108 -0
- enbid_ananke/Enbid-2.0/src/main.o +0 -0
- enbid_ananke/Enbid-2.0/src/ngb_search.cpp +2315 -0
- enbid_ananke/Enbid-2.0/src/ngb_search.h +35 -0
- enbid_ananke/Enbid-2.0/src/ngb_search.o +0 -0
- enbid_ananke/Enbid-2.0/src/nr.cpp +186 -0
- enbid_ananke/Enbid-2.0/src/nr.h +13 -0
- enbid_ananke/Enbid-2.0/src/nr.o +0 -0
- enbid_ananke/Enbid-2.0/src/proto.h +22 -0
- enbid_ananke/Enbid-2.0/src/read_ic.cpp +434 -0
- enbid_ananke/Enbid-2.0/src/read_ic.o +0 -0
- enbid_ananke/Enbid-2.0/src/tree.cpp +973 -0
- enbid_ananke/Enbid-2.0/src/tree.h +34 -0
- enbid_ananke/Enbid-2.0/src/tree.o +0 -0
- enbid_ananke/Enbid-2.0/src/tree_search.cpp +597 -0
- enbid_ananke/Enbid-2.0/src/tree_search.o +0 -0
- enbid_ananke/__init__.py +318 -0
- enbid_ananke/__license__/LICENSE +339 -0
- enbid_ananke/__license__/__init__.py +9 -0
- enbid_ananke/__metadata__.py +160 -0
- enbid_ananke/_builtin_utils.py +62 -0
- enbid_ananke/_constants.py +56 -0
- enbid_ananke/_defaults.py +36 -0
- enbid_ananke/_name.py +10 -0
- enbid_ananke/_templates.py +71 -0
- enbid_ananke/_version.py +21 -0
- enbid_ananke/utils.py +11 -0
- enbid_ananke-0.3.0.dist-info/METADATA +44 -0
- enbid_ananke-0.3.0.dist-info/RECORD +68 -0
- enbid_ananke-0.3.0.dist-info/WHEEL +5 -0
- enbid_ananke-0.3.0.dist-info/licenses/LICENSE +339 -0
- enbid_ananke-0.3.0.dist-info/top_level.txt +2 -0
@@ -0,0 +1,2315 @@
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/***************************************************************************
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ngb_search.cpp - description
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-------------------
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begin : Mon Jan 16 2006
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copyright : (C) 2006 by Sanjib Sharma
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email : ssharma@aip.de
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***************************************************************************/
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/***************************************************************************
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* *
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* This program is free software; you can redistribute it and/or modify *
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* it under the terms of the GNU General Public License as published by *
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* the Free Software Foundation; either version 2 of the License, or *
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* (at your option) any later version. *
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* *
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***************************************************************************/
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#include <stdio.h>
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#include <stdlib.h>
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#include <string>
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#include <math.h>
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#include <algorithm>
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#include "allvars.h"
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#include "nr.h"
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#include "tree.h"
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#include "functions.h"
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#define adjust_heap(x,size1)\
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{\
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hi=0;\
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while(1)\
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{\
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hj=((hi+1)<<1);\
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if(hj>size1) break;\
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--hj;\
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if(hj<(size1-1))\
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if(x[hj]<x[hj+1])\
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++hj;\
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if(x[hi]<x[hj])\
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{\
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ptemp=x[hj];x[hj]=x[hi];x[hi]=ptemp;\
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hi=hj;\
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}\
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else\
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break;\
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}\
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pqHead=x->pq;\
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}
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inline double periodic(double x,double l2)
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{
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if(x > l2)
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x-=l2*2;
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if(x < -l2)
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x+=l2*2;
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return x;
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}
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class rmlist
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{
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public:
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float r,Mass;
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// rmlist(float r1,float Mass1){r=r1; Mass=Mass1;}
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};
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void ngb_treesearch_sphere_metric(int no,struct NODE *nodes1, int NumBucket, int DesNumNgb,struct pqueue* pqxA,bool* imarkA)
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{
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int k,l,i,cell,cp,ct;
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double temp1,temp2,temp3;
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bool b1=0;
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struct pqueue ptemp;
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int hj,hi;
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// cout<<nodes1<<endl;
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cell=no;
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while(cell!=ROOT)
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{
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cp=SIBLING(cell,nodes1);
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ct=cp;
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SETNEXT(ct,nodes1);
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while(1)
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{
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#ifdef PERIODIC
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k=(nodes1+(PARENT(cp,nodes1)))->k1;
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if((nodes1+cp)->bnd->x[k][0] > searchx[k][1])
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{
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if(All.boxh[k]>0)
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{
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temp1=(nodes1+cp)->bnd->x[k][1] - searchx[k][0];
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if(temp1<All.boxh[k])
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goto GETNEXT;
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else
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if((temp1-(All.boxh[k]*2))<0)
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goto GETNEXT;
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}
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else
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goto GETNEXT;
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}
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if((nodes1+cp)->bnd->x[k][1] < searchx[k][0])
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{
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if(All.boxh[k]>0)
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{
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temp1=searchx[k][1]-(nodes1+cp)->bnd->x[k][0];
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if(temp1<All.boxh[k])
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goto GETNEXT;
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else
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if((temp1-(All.boxh[k]*2))<0)
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goto GETNEXT;
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}
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else
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goto GETNEXT;
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}
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#else
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k=(nodes1+(PARENT(cp,nodes1)))->k1;
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if((nodes1+cp)->bnd->x[k][0] > searchx[k][1])
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goto GETNEXT;
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if((nodes1+cp)->bnd->x[k][1] < searchx[k][0])
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goto GETNEXT;
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for(k=0,temp3=0; k<ND; ++k)
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{
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temp1=((nodes1+cp)->bnd->x[k][1]-searchcenter[k])*metric[k];
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temp2=((nodes1+cp)->bnd->x[k][0]-searchcenter[k])*metric[k];
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if(temp1>0)
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if(temp2<0)
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continue;
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// break;
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if(temp1<0) {temp1=-temp1; temp2=-temp2;}
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if(temp1<temp2) temp2=temp1;
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temp3+=temp2*temp2;
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if(temp3>pqHead->r) goto GETNEXT;
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}
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#endif
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if((nodes1+cp)->count>NumBucket)
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{
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cp=LOWER(cp,nodes1);
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continue;
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}
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else
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{
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b1=0;
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for(l=0; l<(nodes1+cp)->count; ++l)
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{
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i=(nodes1+cp)->lid+l;
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if(imarkA[i]) continue;
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for(k=0,temp2=0; k<ND; ++k)
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{
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#ifdef PERIODIC
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temp1=periodic((Part[i].Pos[k]-searchcenter[k]),All.boxh[k])*metric[k];
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#else
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temp1=(Part[i].Pos[k]-searchcenter[k])*metric[k];
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#endif
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temp2+=temp1*temp1;
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}
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if(temp2 < pqHead->r)
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{
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imarkA[pqHead->p]=0; imarkA[i]=1;
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pqHead->r=temp2; pqHead->p=i;
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for(k=0;k<ND;++k)
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pqHead->x[k]=Part[i].Pos[k];
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adjust_heap(pqxA,DesNumNgb); b1=1;
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}
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}
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if(b1)
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for(k=0; k<ND; ++k)
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{
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temp1=sqrt(pqHead->r)/metric[k];
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searchx[k][0]=searchcenter[k]-temp1;
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searchx[k][1]=searchcenter[k]+temp1;
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}
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}
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GETNEXT:
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SETNEXT(cp,nodes1);
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if(cp==ct) break;
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}
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cell=PARENT(cell,nodes1);
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}
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return;
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}
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void ngb_treesearch_sphere_metric_exact_h(int no,struct NODE *nodes1, int NumBucket, vector<class rmlist> & rmlistv,bool* imarkA)
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{
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int k,l,i,cell,cp,ct;
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double temp1,temp2,temp3;
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class rmlist rmliste;
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// cout<<nodes1<<endl;
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cell=no;
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while(cell!=ROOT)
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{
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cp=SIBLING(cell,nodes1);
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ct=cp;
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SETNEXT(ct,nodes1);
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while(1)
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{
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#ifdef PERIODIC
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k=(nodes1+(PARENT(cp,nodes1)))->k1;
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if((nodes1+cp)->bnd->x[k][0] > searchx[k][1])
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{
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if(All.boxh[k]>0)
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{
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temp1=(nodes1+cp)->bnd->x[k][1] - searchx[k][0];
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if(temp1<All.boxh[k])
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goto GETNEXT;
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else
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if((temp1-(All.boxh[k]*2))<0)
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goto GETNEXT;
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}
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else
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goto GETNEXT;
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}
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if((nodes1+cp)->bnd->x[k][1] < searchx[k][0])
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{
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if(All.boxh[k]>0)
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{
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temp1=searchx[k][1]-(nodes1+cp)->bnd->x[k][0];
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if(temp1<All.boxh[k])
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goto GETNEXT;
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else
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if((temp1-(All.boxh[k]*2))<0)
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goto GETNEXT;
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}
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else
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goto GETNEXT;
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}
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#else
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k=(nodes1+(PARENT(cp,nodes1)))->k1;
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if((nodes1+cp)->bnd->x[k][0] > searchx[k][1])
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goto GETNEXT;
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if((nodes1+cp)->bnd->x[k][1] < searchx[k][0])
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goto GETNEXT;
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for(k=0,temp3=0; k<ND; ++k)
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{
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temp1=((nodes1+cp)->bnd->x[k][1]-searchcenter[k])*metric[k];
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temp2=((nodes1+cp)->bnd->x[k][0]-searchcenter[k])*metric[k];
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if(temp1>0)
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if(temp2<0)
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continue;
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// break;
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if(temp1<0) {temp1=-temp1; temp2=-temp2;}
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if(temp1<temp2) temp2=temp1;
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temp3+=temp2*temp2;
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if(temp3>pqHead->r) goto GETNEXT;
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}
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#endif
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if((nodes1+cp)->count>NumBucket)
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{
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cp=LOWER(cp,nodes1);
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continue;
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}
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else
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{
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for(l=0; l<(nodes1+cp)->count; ++l)
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{
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i=(nodes1+cp)->lid+l;
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if(imarkA[i]) continue;
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for(k=0,temp2=0; k<ND; ++k)
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{
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#ifdef PERIODIC
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temp1=periodic((Part[i].Pos[k]-searchcenter[k]),All.boxh[k])*metric[k];
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#else
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temp1=(Part[i].Pos[k]-searchcenter[k])*metric[k];
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#endif
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temp2+=temp1*temp1;
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}
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if(temp2 < 1.0)
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{
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rmliste.r=temp2;
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rmliste.Mass=Part[i].Mass;
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rmlistv.push_back(rmliste);
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}
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}
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}
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GETNEXT:
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SETNEXT(cp,nodes1);
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if(cp==ct) break;
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}
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cell=PARENT(cell,nodes1);
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+
|
306
|
+
}
|
307
|
+
|
308
|
+
return;
|
309
|
+
}
|
310
|
+
|
311
|
+
|
312
|
+
|
313
|
+
|
314
|
+
|
315
|
+
|
316
|
+
|
317
|
+
|
318
|
+
|
319
|
+
void ngb_treesearch_sphere_gmatrix(int no,struct NODE *nodes1, int NumBucket, int DesNumNgb,struct pqueue* pqxA,bool * imarkA)
|
320
|
+
{
|
321
|
+
|
322
|
+
|
323
|
+
int k,l,i,j,cell,cp,ct;
|
324
|
+
double temp1,temp2,temp3;
|
325
|
+
bool b1=0;
|
326
|
+
struct pqueue ptemp;
|
327
|
+
int hj,hi;
|
328
|
+
|
329
|
+
// cout<<nodes1<<endl;
|
330
|
+
|
331
|
+
cell=no;
|
332
|
+
while(cell!=ROOT)
|
333
|
+
{
|
334
|
+
cp=SIBLING(cell,nodes1);
|
335
|
+
ct=cp;
|
336
|
+
SETNEXT(ct,nodes1);
|
337
|
+
while(1)
|
338
|
+
{
|
339
|
+
|
340
|
+
#ifdef PERIODIC
|
341
|
+
k=(nodes1+(PARENT(cp,nodes1)))->k1;
|
342
|
+
if((nodes1+cp)->bnd->x[k][0] > searchx[k][1])
|
343
|
+
{
|
344
|
+
if(All.boxh[k]>0)
|
345
|
+
{
|
346
|
+
temp1=(nodes1+cp)->bnd->x[k][1] - searchx[k][0];
|
347
|
+
if(temp1<All.boxh[k])
|
348
|
+
goto GETNEXT;
|
349
|
+
else
|
350
|
+
if((temp1-(All.boxh[k]*2))<0)
|
351
|
+
goto GETNEXT;
|
352
|
+
}
|
353
|
+
else
|
354
|
+
goto GETNEXT;
|
355
|
+
}
|
356
|
+
|
357
|
+
if((nodes1+cp)->bnd->x[k][1] < searchx[k][0])
|
358
|
+
{
|
359
|
+
|
360
|
+
if(All.boxh[k]>0)
|
361
|
+
{
|
362
|
+
temp1=searchx[k][1]-(nodes1+cp)->bnd->x[k][0];
|
363
|
+
if(temp1<All.boxh[k])
|
364
|
+
goto GETNEXT;
|
365
|
+
else
|
366
|
+
if((temp1-(All.boxh[k]*2))<0)
|
367
|
+
goto GETNEXT;
|
368
|
+
}
|
369
|
+
else
|
370
|
+
goto GETNEXT;
|
371
|
+
}
|
372
|
+
|
373
|
+
#else
|
374
|
+
k=(nodes1+(PARENT(cp,nodes1)))->k1;
|
375
|
+
if((nodes1+cp)->bnd->x[k][0] > searchx[k][1])
|
376
|
+
goto GETNEXT;
|
377
|
+
if((nodes1+cp)->bnd->x[k][1] < searchx[k][0])
|
378
|
+
goto GETNEXT;
|
379
|
+
|
380
|
+
for(k=0,temp3=0; k<ND; ++k)
|
381
|
+
{
|
382
|
+
temp1=((nodes1+cp)->bnd->x[k][1]-searchcenter[k])*metric1[k];
|
383
|
+
temp2=((nodes1+cp)->bnd->x[k][0]-searchcenter[k])*metric1[k];
|
384
|
+
if(temp1>0)
|
385
|
+
if(temp2<0)
|
386
|
+
continue;
|
387
|
+
// break;
|
388
|
+
if(temp1<0) {temp1=-temp1; temp2=-temp2;}
|
389
|
+
if(temp1<temp2) temp2=temp1;
|
390
|
+
temp3+=temp2*temp2;
|
391
|
+
if(temp3>pqHead->r) goto GETNEXT;
|
392
|
+
}
|
393
|
+
|
394
|
+
#endif
|
395
|
+
|
396
|
+
if((nodes1+cp)->count>NumBucket)
|
397
|
+
{
|
398
|
+
cp=LOWER(cp,nodes1);
|
399
|
+
continue;
|
400
|
+
}
|
401
|
+
else
|
402
|
+
{
|
403
|
+
b1=0;
|
404
|
+
for(l=0; l<(nodes1+cp)->count; ++l)
|
405
|
+
{
|
406
|
+
i=(nodes1+cp)->lid+l;
|
407
|
+
if(imarkA[i]) continue;
|
408
|
+
for(k=0,temp2=0; k<ND; ++k)
|
409
|
+
{
|
410
|
+
|
411
|
+
#ifdef PERIODIC
|
412
|
+
for(j=0,temp1=0; j<ND; ++j)
|
413
|
+
temp1+=periodic((Part[i].Pos[j]-searchcenter[j]),All.boxh[j])*gmatrix[j][k]*metric1[j];
|
414
|
+
#else
|
415
|
+
for(j=0,temp1=0; j<ND; ++j)
|
416
|
+
temp1+=(Part[i].Pos[j]-searchcenter[j])*gmatrix[j][k]*metric1[j];
|
417
|
+
#endif
|
418
|
+
temp1=temp1*metric[k];
|
419
|
+
temp2+=temp1*temp1;
|
420
|
+
}
|
421
|
+
if(temp2 < pqHead->r)
|
422
|
+
{
|
423
|
+
imarkA[pqHead->p]=0; imarkA[i]=1;
|
424
|
+
pqHead->r=temp2; pqHead->p=i;
|
425
|
+
for(k=0;k<ND;++k)
|
426
|
+
pqHead->x[k]=Part[i].Pos[k];
|
427
|
+
adjust_heap(pqxA,DesNumNgb); b1=1;
|
428
|
+
}
|
429
|
+
}
|
430
|
+
if(b1)
|
431
|
+
{
|
432
|
+
temp2=sqrt(pqHead->r);
|
433
|
+
for(k=0; k<ND; ++k)
|
434
|
+
{
|
435
|
+
temp1=temp2/metric1[k];
|
436
|
+
searchx[k][0]=searchcenter[k]-temp1;
|
437
|
+
searchx[k][1]=searchcenter[k]+temp1;
|
438
|
+
}
|
439
|
+
}
|
440
|
+
}
|
441
|
+
|
442
|
+
GETNEXT:
|
443
|
+
SETNEXT(cp,nodes1);
|
444
|
+
if(cp==ct) break;
|
445
|
+
}
|
446
|
+
cell=PARENT(cell,nodes1);
|
447
|
+
}
|
448
|
+
|
449
|
+
return;
|
450
|
+
}
|
451
|
+
|
452
|
+
|
453
|
+
void ngb_treesearch_sphere_nometric(int no, struct NODE* nodes1,int NumBucket, int DesNumNgb,struct pqueue* pqxA,bool * imarkA)
|
454
|
+
{
|
455
|
+
int k,l,i,cell,cp,ct;
|
456
|
+
double temp1,temp2,temp3;
|
457
|
+
bool b1=0;
|
458
|
+
struct pqueue ptemp;
|
459
|
+
int hj,hi;
|
460
|
+
|
461
|
+
cell=no;
|
462
|
+
while(cell!=ROOT)
|
463
|
+
{
|
464
|
+
cp=SIBLING(cell,nodes1);
|
465
|
+
ct=cp;
|
466
|
+
SETNEXT(ct,nodes1);
|
467
|
+
while(1)
|
468
|
+
{
|
469
|
+
#ifdef PERIODIC
|
470
|
+
k=(nodes1+(PARENT(cp,nodes1)))->k1;
|
471
|
+
if((nodes1+cp)->bnd->x[k][0] > searchx[k][1])
|
472
|
+
{
|
473
|
+
if(All.boxh[k]>0)
|
474
|
+
{
|
475
|
+
temp1=(nodes1+cp)->bnd->x[k][1] - searchx[k][0];
|
476
|
+
if(temp1<All.boxh[k])
|
477
|
+
goto GETNEXT;
|
478
|
+
else
|
479
|
+
if((temp1-(All.boxh[k]*2))<0)
|
480
|
+
goto GETNEXT;
|
481
|
+
}
|
482
|
+
else
|
483
|
+
goto GETNEXT;
|
484
|
+
}
|
485
|
+
|
486
|
+
if((nodes1+cp)->bnd->x[k][1] < searchx[k][0])
|
487
|
+
{
|
488
|
+
|
489
|
+
if(All.boxh[k]>0)
|
490
|
+
{
|
491
|
+
temp1=searchx[k][1]-(nodes1+cp)->bnd->x[k][0];
|
492
|
+
if(temp1<All.boxh[k])
|
493
|
+
goto GETNEXT;
|
494
|
+
else
|
495
|
+
if((temp1-(All.boxh[k]*2))<0)
|
496
|
+
goto GETNEXT;
|
497
|
+
}
|
498
|
+
else
|
499
|
+
goto GETNEXT;
|
500
|
+
}
|
501
|
+
|
502
|
+
#else
|
503
|
+
k=(nodes1+(PARENT(cp,nodes1)))->k1;
|
504
|
+
if((nodes1+cp)->bnd->x[k][0] > searchx[k][1])
|
505
|
+
goto GETNEXT;
|
506
|
+
if((nodes1+cp)->bnd->x[k][1] < searchx[k][0])
|
507
|
+
goto GETNEXT;
|
508
|
+
|
509
|
+
for(k=0,temp3=0; k<ND; ++k)
|
510
|
+
{
|
511
|
+
temp1=(nodes1[cp].bnd->x[k][1]-searchcenter[k]);
|
512
|
+
temp2=(nodes1[cp].bnd->x[k][0]-searchcenter[k]);
|
513
|
+
if(temp1>0)
|
514
|
+
if(temp2<0)
|
515
|
+
continue;
|
516
|
+
// break;
|
517
|
+
if(temp1<0) {temp1=-temp1; temp2=-temp2;}
|
518
|
+
if(temp1<temp2) temp2=temp1;
|
519
|
+
temp3+=temp2*temp2;
|
520
|
+
if(temp3>pqHead->r) goto GETNEXT;
|
521
|
+
}
|
522
|
+
#endif
|
523
|
+
if((nodes1+cp)->count>NumBucket)
|
524
|
+
{
|
525
|
+
cp=LOWER(cp,nodes1);
|
526
|
+
continue;
|
527
|
+
}
|
528
|
+
else
|
529
|
+
{
|
530
|
+
b1=0;
|
531
|
+
for(l=0; l<(nodes1+cp)->count; ++l)
|
532
|
+
{
|
533
|
+
i=(nodes1+cp)->lid+l;
|
534
|
+
if(imarkA[i]) continue;
|
535
|
+
for(k=0,temp2=0; k<ND; ++k)
|
536
|
+
{
|
537
|
+
|
538
|
+
#ifdef PERIODIC
|
539
|
+
temp1=periodic((Part[i].Pos[k]-searchcenter[k]),All.boxh[k]);
|
540
|
+
#else
|
541
|
+
temp1=(Part[i].Pos[k]-searchcenter[k]);
|
542
|
+
#endif
|
543
|
+
temp2+=temp1*temp1;
|
544
|
+
}
|
545
|
+
if(temp2 < pqHead->r)
|
546
|
+
{
|
547
|
+
imarkA[pqHead->p]=0; imarkA[i]=1;
|
548
|
+
pqHead->r=temp2; pqHead->p=i;
|
549
|
+
for(k=0;k<ND;++k)
|
550
|
+
pqHead->x[k]=Part[i].Pos[k];
|
551
|
+
adjust_heap(pqxA,DesNumNgb); b1=1;
|
552
|
+
}
|
553
|
+
}
|
554
|
+
if(b1)
|
555
|
+
for(k=0; k<ND; ++k)
|
556
|
+
{
|
557
|
+
temp1=sqrt(pqHead->r);
|
558
|
+
searchx[k][0]=searchcenter[k]-temp1;
|
559
|
+
searchx[k][1]=searchcenter[k]+temp1;
|
560
|
+
}
|
561
|
+
}
|
562
|
+
|
563
|
+
GETNEXT:
|
564
|
+
SETNEXT(cp,nodes1);
|
565
|
+
if(cp==ct) break;
|
566
|
+
}
|
567
|
+
cell=PARENT(cell,nodes1);
|
568
|
+
}
|
569
|
+
|
570
|
+
return;
|
571
|
+
}
|
572
|
+
|
573
|
+
|
574
|
+
|
575
|
+
void ngb_treesearch_box_metric(int no,struct NODE *nodes1, int NumBucket, int DesNumNgb,struct pqueue* pqxA, bool * imarkA)
|
576
|
+
{
|
577
|
+
int k,l,i,cell,cp,ct;
|
578
|
+
double temp1,temp2;
|
579
|
+
bool b1=0;
|
580
|
+
struct pqueue ptemp;
|
581
|
+
int hj,hi;
|
582
|
+
|
583
|
+
// cout<<nodes1<<endl;
|
584
|
+
|
585
|
+
cell=no;
|
586
|
+
while(cell!=ROOT)
|
587
|
+
{
|
588
|
+
cp=SIBLING(cell,nodes1);
|
589
|
+
ct=cp;
|
590
|
+
SETNEXT(ct,nodes1);
|
591
|
+
while(1)
|
592
|
+
{
|
593
|
+
|
594
|
+
#ifdef PERIODIC
|
595
|
+
k=(nodes1+(PARENT(cp,nodes1)))->k1;
|
596
|
+
if((nodes1+cp)->bnd->x[k][0] > searchx[k][1])
|
597
|
+
{
|
598
|
+
if(All.boxh[k]>0)
|
599
|
+
{
|
600
|
+
temp1=(nodes1+cp)->bnd->x[k][1] - searchx[k][0];
|
601
|
+
if(temp1<All.boxh[k])
|
602
|
+
goto GETNEXT;
|
603
|
+
else
|
604
|
+
if((temp1-(All.boxh[k]*2))<0)
|
605
|
+
goto GETNEXT;
|
606
|
+
}
|
607
|
+
else
|
608
|
+
goto GETNEXT;
|
609
|
+
}
|
610
|
+
|
611
|
+
if((nodes1+cp)->bnd->x[k][1] < searchx[k][0])
|
612
|
+
{
|
613
|
+
|
614
|
+
if(All.boxh[k]>0)
|
615
|
+
{
|
616
|
+
temp1=searchx[k][1]-(nodes1+cp)->bnd->x[k][0];
|
617
|
+
if(temp1<All.boxh[k])
|
618
|
+
goto GETNEXT;
|
619
|
+
else
|
620
|
+
if((temp1-(All.boxh[k]*2))<0)
|
621
|
+
goto GETNEXT;
|
622
|
+
}
|
623
|
+
else
|
624
|
+
goto GETNEXT;
|
625
|
+
}
|
626
|
+
#else
|
627
|
+
k=(nodes1+(PARENT(cp,nodes1)))->k1;
|
628
|
+
if((nodes1+cp)->bnd->x[k][0] > searchx[k][1])
|
629
|
+
goto GETNEXT;
|
630
|
+
if((nodes1+cp)->bnd->x[k][1] < searchx[k][0])
|
631
|
+
goto GETNEXT;
|
632
|
+
#endif
|
633
|
+
|
634
|
+
if((nodes1+cp)->count>NumBucket)
|
635
|
+
{
|
636
|
+
cp=LOWER(cp,nodes1);
|
637
|
+
continue;
|
638
|
+
}
|
639
|
+
else
|
640
|
+
{
|
641
|
+
b1=0;
|
642
|
+
for(l=0; l<(nodes1+cp)->count; ++l)
|
643
|
+
{
|
644
|
+
i=(nodes1+cp)->lid+l;
|
645
|
+
if(imarkA[i]) continue;
|
646
|
+
for(k=0,temp2=0; k<ND; ++k)
|
647
|
+
{
|
648
|
+
#ifdef PERIODIC
|
649
|
+
temp1=periodic((Part[i].Pos[k]-searchcenter[k]),All.boxh[k])*metric[k];
|
650
|
+
#else
|
651
|
+
temp1=(Part[i].Pos[k]-searchcenter[k])*metric[k];
|
652
|
+
#endif
|
653
|
+
if(temp1<0) temp1=-temp1;
|
654
|
+
if(temp2<temp1) temp2=temp1;
|
655
|
+
}
|
656
|
+
if(temp2 < pqHead->r)
|
657
|
+
{
|
658
|
+
imarkA[pqHead->p]=0; imarkA[i]=1;
|
659
|
+
pqHead->r=temp2; pqHead->p=i;
|
660
|
+
for(k=0;k<ND;++k)
|
661
|
+
pqHead->x[k]=Part[i].Pos[k];
|
662
|
+
adjust_heap(pqxA,DesNumNgb); b1=1;
|
663
|
+
}
|
664
|
+
}
|
665
|
+
if(b1)
|
666
|
+
for(k=0; k<ND; ++k)
|
667
|
+
{
|
668
|
+
temp1=pqHead->r/metric[k];
|
669
|
+
searchx[k][0]=searchcenter[k]-temp1;
|
670
|
+
searchx[k][1]=searchcenter[k]+temp1;
|
671
|
+
}
|
672
|
+
}
|
673
|
+
|
674
|
+
GETNEXT:
|
675
|
+
SETNEXT(cp,nodes1);
|
676
|
+
if(cp==ct) break;
|
677
|
+
}
|
678
|
+
cell=PARENT(cell,nodes1);
|
679
|
+
}
|
680
|
+
|
681
|
+
return;
|
682
|
+
}
|
683
|
+
|
684
|
+
|
685
|
+
|
686
|
+
|
687
|
+
float ngb_treedensity_sphere_metric(float xyz[ND],struct NODE *nodes1, int desngb, struct pqueue* pqxA, struct linklist* pqStartA, bool *idoneA,bool *imarkA)
|
688
|
+
{
|
689
|
+
real u,wk,r; /* search radius */
|
690
|
+
int i,j,k,th;
|
691
|
+
float rhoxyz;
|
692
|
+
double xmin[ND],xmax[ND],temp,temp1;
|
693
|
+
struct linklist *pq;
|
694
|
+
bool b1,b2=1;
|
695
|
+
int b3=1;
|
696
|
+
struct pqueue ptemp;
|
697
|
+
int hj,hi;
|
698
|
+
|
699
|
+
/* calculate metric */
|
700
|
+
for(j=0; j<ND; j++)
|
701
|
+
metric[j]=1.0;
|
702
|
+
|
703
|
+
|
704
|
+
if(All.CubicCells==1)
|
705
|
+
{
|
706
|
+
|
707
|
+
if(ND==6)
|
708
|
+
{
|
709
|
+
|
710
|
+
for(j=0; j<ND; j++)
|
711
|
+
searchcenter[j]=0.0;
|
712
|
+
ngb_calculate_metric(xyz,nodes1);
|
713
|
+
for(j=0; j<ND; j++)
|
714
|
+
{
|
715
|
+
metric[j]=searchcenter[j];
|
716
|
+
}
|
717
|
+
|
718
|
+
|
719
|
+
for(j=0,temp=1.0; j<3; j++)
|
720
|
+
temp*=(metric[j]);
|
721
|
+
temp=pow(temp,0.3333);
|
722
|
+
for(j=0; j<3; j++)
|
723
|
+
metric[j]=1/temp;
|
724
|
+
|
725
|
+
|
726
|
+
for(j=3,temp=1.0; j<6; j++)
|
727
|
+
temp*=(metric[j]);
|
728
|
+
temp=pow(temp,0.3333);
|
729
|
+
for(j=3; j<6; j++)
|
730
|
+
metric[j]=1/temp;
|
731
|
+
}
|
732
|
+
}
|
733
|
+
else
|
734
|
+
{
|
735
|
+
for(j=0; j<ND; j++)
|
736
|
+
searchcenter[j]=0.0;
|
737
|
+
ngb_calculate_metric(xyz,nodes1);
|
738
|
+
for(j=0; j<ND; j++)
|
739
|
+
{
|
740
|
+
metric[j]=1.0/searchcenter[j];
|
741
|
+
}
|
742
|
+
}
|
743
|
+
|
744
|
+
for(j=0; j<ND; j++)
|
745
|
+
searchcenter[j]=xyz[j];
|
746
|
+
|
747
|
+
|
748
|
+
|
749
|
+
|
750
|
+
while(b2)
|
751
|
+
{
|
752
|
+
/* identify the node containing the cell*/
|
753
|
+
th=1;
|
754
|
+
while(nodes1[th].count>desngb)
|
755
|
+
{
|
756
|
+
j=nodes1[th].k1;
|
757
|
+
if(xyz[j] < nodes1[(LOWER(th,nodes1))].bnd->x[j][1])
|
758
|
+
th=(LOWER(th,nodes1));
|
759
|
+
else
|
760
|
+
th=(UPPER(th,nodes1));
|
761
|
+
}
|
762
|
+
while(nodes1[th].count<desngb)
|
763
|
+
{
|
764
|
+
th=PARENT(th,nodes1);
|
765
|
+
|
766
|
+
}
|
767
|
+
|
768
|
+
|
769
|
+
|
770
|
+
if(pnew)
|
771
|
+
{
|
772
|
+
|
773
|
+
for(pq=pqStartA;pq<(pqStartA+desngb);pq++)
|
774
|
+
imarkA[pq->p]=0;
|
775
|
+
|
776
|
+
for(pq=pqStartA,j=0;pq<(pqStartA+desngb);j++,pq++)
|
777
|
+
{
|
778
|
+
i=nodes1[th].lid+j;
|
779
|
+
pq->p=i;
|
780
|
+
for(k=0; k<ND; k++)
|
781
|
+
pq->x[k]=Part[i].Pos[k];
|
782
|
+
imarkA[i]=1;
|
783
|
+
}
|
784
|
+
}
|
785
|
+
|
786
|
+
|
787
|
+
|
788
|
+
for(pq=pqStartA,i=0;pq<(pqStartA+desngb);++i,pq++)
|
789
|
+
{
|
790
|
+
for(j=0,pq->r=0.0; j<ND; j++)
|
791
|
+
{
|
792
|
+
#ifdef PERIODIC
|
793
|
+
temp=periodic((pq->x[j]-searchcenter[j]),All.boxh[j])*metric[j];
|
794
|
+
#else
|
795
|
+
temp=(pq->x[j]-searchcenter[j])*metric[j];
|
796
|
+
#endif
|
797
|
+
|
798
|
+
pq->r+=temp*temp;
|
799
|
+
}
|
800
|
+
pqxA[desngb-i-1].pq=pq;
|
801
|
+
}
|
802
|
+
|
803
|
+
|
804
|
+
make_heap(pqxA,(pqxA+desngb)); pqHead=pqxA->pq;
|
805
|
+
|
806
|
+
for(k=0; k<ND; k++)
|
807
|
+
{
|
808
|
+
temp=sqrt(pqHead->r)/metric[k];
|
809
|
+
searchx[k][0]=searchcenter[k]-temp;
|
810
|
+
searchx[k][1]=searchcenter[k]+temp;
|
811
|
+
}
|
812
|
+
|
813
|
+
|
814
|
+
b1=0;
|
815
|
+
if (pnew) k=desngb; else k=0;
|
816
|
+
for(j=0; j<nodes1[th].count; j++)
|
817
|
+
{
|
818
|
+
|
819
|
+
i=nodes1[th].lid+j;
|
820
|
+
if(imarkA[i]) continue;
|
821
|
+
for(k=0,r=0; k<ND; k++)
|
822
|
+
{
|
823
|
+
#ifdef PERIODIC
|
824
|
+
temp=periodic((Part[i].Pos[k]-searchcenter[k]),All.boxh[k])*metric[k];
|
825
|
+
#else
|
826
|
+
temp=(Part[i].Pos[k]-searchcenter[k])*metric[k];
|
827
|
+
#endif
|
828
|
+
r+=temp*temp;
|
829
|
+
}
|
830
|
+
|
831
|
+
|
832
|
+
if(r < pqHead->r)
|
833
|
+
{
|
834
|
+
imarkA[pqHead->p]=0; imarkA[i]=1;
|
835
|
+
pqHead->r=r; pqHead->p=i;
|
836
|
+
for(k=0;k<ND;k++)
|
837
|
+
pqHead->x[k]=Part[i].Pos[k];
|
838
|
+
adjust_heap(pqxA,desngb); b1=1;
|
839
|
+
}
|
840
|
+
|
841
|
+
}
|
842
|
+
|
843
|
+
|
844
|
+
if(b1)
|
845
|
+
for(k=0; k<ND; k++)
|
846
|
+
{
|
847
|
+
temp=sqrt(pqHead->r)/metric[k];
|
848
|
+
searchx[k][0]=searchcenter[k]-temp;
|
849
|
+
searchx[k][1]=searchcenter[k]+temp;
|
850
|
+
}
|
851
|
+
|
852
|
+
|
853
|
+
|
854
|
+
|
855
|
+
ngb_treesearch_sphere_metric(th,nodes1,desngb/2,desngb,pqxA,imarkA);
|
856
|
+
|
857
|
+
|
858
|
+
//----------------------------------------
|
859
|
+
b2=0;
|
860
|
+
if(b3<2)
|
861
|
+
if(All.VolCorr==1)
|
862
|
+
{
|
863
|
+
|
864
|
+
#ifdef PERIODIC
|
865
|
+
for(i=0; i<desngb; i++)
|
866
|
+
{
|
867
|
+
|
868
|
+
for(k=0; k<ND; k++)
|
869
|
+
{
|
870
|
+
temp=periodic((pqStartA[i].x[k]-searchcenter[k]),All.boxh[k]);
|
871
|
+
if((i==0)||(temp<xmin[k])) xmin[k]=temp;
|
872
|
+
if((i==0)||(temp>xmax[k])) xmax[k]=temp;
|
873
|
+
}
|
874
|
+
}
|
875
|
+
|
876
|
+
for(k=0; k<ND; k++)
|
877
|
+
{
|
878
|
+
xmin[k]+=searchcenter[k];
|
879
|
+
xmax[k]+=searchcenter[k];
|
880
|
+
|
881
|
+
}
|
882
|
+
#else
|
883
|
+
for(i=0; i<desngb; i++)
|
884
|
+
{
|
885
|
+
|
886
|
+
for(k=0; k<ND; k++)
|
887
|
+
{
|
888
|
+
if((i==0)||(pqStartA[i].x[k]<xmin[k])) xmin[k]=pqStartA[i].x[k];
|
889
|
+
if((i==0)||(pqStartA[i].x[k]>xmax[k])) xmax[k]=pqStartA[i].x[k];
|
890
|
+
}
|
891
|
+
}
|
892
|
+
#endif
|
893
|
+
|
894
|
+
|
895
|
+
|
896
|
+
|
897
|
+
|
898
|
+
for(k=0; k<ND; k++)
|
899
|
+
{
|
900
|
+
temp=sqrt(pqHead->r)/metric[k];
|
901
|
+
searchx[k][0]=searchcenter[k]-temp;
|
902
|
+
searchx[k][1]=searchcenter[k]+temp;
|
903
|
+
}
|
904
|
+
|
905
|
+
for(k=0;k<ND;k++)
|
906
|
+
{
|
907
|
+
|
908
|
+
if(All.CubicCells==1)
|
909
|
+
temp1=(xmax[k]-xmin[k])*25.0/(All.DesNumNgb);
|
910
|
+
else
|
911
|
+
temp1=(xmax[k]-xmin[k])*25.0/(All.DesNumNgb);
|
912
|
+
|
913
|
+
|
914
|
+
|
915
|
+
if(((searchx[k][1]-xmax[k])>temp1)&&((xmin[k]-searchx[k][0])>temp1))
|
916
|
+
{
|
917
|
+
b2=1;
|
918
|
+
}
|
919
|
+
}
|
920
|
+
|
921
|
+
if(b2)
|
922
|
+
for(k=0;k<ND;k++)
|
923
|
+
{
|
924
|
+
temp=(xmax[k]-xmin[k])*0.5;
|
925
|
+
if(xmax[k]!=xmin[k])
|
926
|
+
{
|
927
|
+
metric[k]=1/temp;
|
928
|
+
}
|
929
|
+
else
|
930
|
+
metric[k]=1/(searchx[k][1]-searchx[k][0]);
|
931
|
+
|
932
|
+
|
933
|
+
}
|
934
|
+
b3++;
|
935
|
+
}
|
936
|
+
|
937
|
+
|
938
|
+
}
|
939
|
+
|
940
|
+
//----------------------------------------
|
941
|
+
|
942
|
+
|
943
|
+
pnext=pqHead->p;
|
944
|
+
r=pqHead->r;
|
945
|
+
|
946
|
+
for(i=0,rhoxyz=0; i<desngb; i++)
|
947
|
+
{
|
948
|
+
u = sqrt(pqStartA[i].r/pqHead->r);
|
949
|
+
if(u<1)
|
950
|
+
{
|
951
|
+
if ((u==0) && (All.KernelBiasCorrection==1))
|
952
|
+
u=ND/(1.0+ND);
|
953
|
+
k = (int)(u*KERNEL_TABLE);
|
954
|
+
wk =( Kernel[k] + (Kernel[k+1]-Kernel[k])*(u-KernelRad[k])*KERNEL_TABLE); rhoxyz+=wk*Part[pqStartA[i].p].Mass;
|
955
|
+
}
|
956
|
+
|
957
|
+
if(idoneA[pqStartA[i].p]==0)
|
958
|
+
if(pqStartA[i].r<r)
|
959
|
+
{pnext=pqStartA[i].p;r=pqStartA[i].r;}
|
960
|
+
|
961
|
+
// cout<<pqStartA[i].p<<" b "<<u<<endl;
|
962
|
+
|
963
|
+
|
964
|
+
}
|
965
|
+
if(idoneA[pnext]==1) pnew=1; else pnew=0;
|
966
|
+
|
967
|
+
|
968
|
+
temp=sqrt(pqHead->r);
|
969
|
+
for(k=0,r=1.0,wk=1.0;k<ND;k++)
|
970
|
+
{
|
971
|
+
r*=metric[k];
|
972
|
+
wk*=temp;
|
973
|
+
}
|
974
|
+
temp=r/wk;
|
975
|
+
// cout<<rhoxyz<<" "<<r<<" "<<wk<<endl;
|
976
|
+
rhoxyz*=temp;
|
977
|
+
// cout<<rhoxyz<<" "<<All.hsv<<" "<<r/wk<<endl;
|
978
|
+
|
979
|
+
return rhoxyz;
|
980
|
+
}
|
981
|
+
|
982
|
+
|
983
|
+
|
984
|
+
|
985
|
+
|
986
|
+
|
987
|
+
float ngb_treedensity_bruteforce(float xyz[ND], int parttype,int desngb, struct pqueue* pqxA, struct linklist* pqStartA)
|
988
|
+
{
|
989
|
+
real u,wk=0.0,r=0.0; /* search radius */
|
990
|
+
int i,j,k,th,l;
|
991
|
+
float rhoxyz=0.0;
|
992
|
+
double xmin[ND],xmax[ND],temp,temp1,temp2;
|
993
|
+
struct linklist *pq;
|
994
|
+
// bool b1,b2=1;
|
995
|
+
// int b3=1;
|
996
|
+
struct pqueue ptemp;
|
997
|
+
int hj,hi;
|
998
|
+
|
999
|
+
|
1000
|
+
for(j=0; j<ND; j++)
|
1001
|
+
searchcenter[j]=xyz[j];
|
1002
|
+
|
1003
|
+
th=1;
|
1004
|
+
for(pq=pqStartA,j=0;pq<(pqStartA+desngb);j++,pq++)
|
1005
|
+
{
|
1006
|
+
i=npartc[parttype]+j;
|
1007
|
+
pq->p=i;
|
1008
|
+
for(k=0; k<ND; k++)
|
1009
|
+
pq->x[k]=Part[i].Pos[k];
|
1010
|
+
}
|
1011
|
+
|
1012
|
+
for(pq=pqStartA,i=0;pq<(pqStartA+desngb);++i,pq++)
|
1013
|
+
{
|
1014
|
+
|
1015
|
+
if(All.AnisotropicKernel==1)
|
1016
|
+
{
|
1017
|
+
for(k=0,pq->r=0.0; k<ND; k++)
|
1018
|
+
{
|
1019
|
+
for(l=0,temp=0; l<ND; ++l)
|
1020
|
+
{
|
1021
|
+
#ifdef PERIODIC
|
1022
|
+
temp+=periodic((pq->x[l]-searchcenter[l]),All.boxh[l])*gmatrix[l][k]*metric1[l];
|
1023
|
+
#else
|
1024
|
+
temp+=(pq->x[l]-searchcenter[l])*gmatrix[l][k]*metric1[l];
|
1025
|
+
#endif
|
1026
|
+
}
|
1027
|
+
temp=temp*metric[k];
|
1028
|
+
pq->r+=temp*temp;
|
1029
|
+
|
1030
|
+
}
|
1031
|
+
}
|
1032
|
+
else
|
1033
|
+
{
|
1034
|
+
|
1035
|
+
for(j=0,pq->r=0.0; j<ND; j++)
|
1036
|
+
{
|
1037
|
+
#ifdef PERIODIC
|
1038
|
+
temp=periodic((pq->x[j]-searchcenter[j]),All.boxh[j])*metric[j];
|
1039
|
+
#else
|
1040
|
+
temp=(pq->x[j]-searchcenter[j])*metric[j];
|
1041
|
+
#endif
|
1042
|
+
if((All.TypeOfSmoothing==2)||(All.TypeOfSmoothing==3))
|
1043
|
+
pq->r+=temp*temp;
|
1044
|
+
if((All.TypeOfSmoothing==4)||(All.TypeOfSmoothing==5))
|
1045
|
+
{
|
1046
|
+
if(temp<0) temp=-temp;
|
1047
|
+
if( pq->r<temp) pq->r=temp;
|
1048
|
+
}
|
1049
|
+
}
|
1050
|
+
}
|
1051
|
+
|
1052
|
+
pqxA[desngb-i-1].pq=pq;
|
1053
|
+
}
|
1054
|
+
|
1055
|
+
make_heap(pqxA,(pqxA+desngb)); pqHead=pqxA->pq;
|
1056
|
+
|
1057
|
+
|
1058
|
+
for(j=desngb; j<npart[parttype]; ++j)
|
1059
|
+
{
|
1060
|
+
i=npartc[parttype]+j;
|
1061
|
+
|
1062
|
+
if((All.TypeOfSmoothing==2)||(All.TypeOfSmoothing==3))
|
1063
|
+
{
|
1064
|
+
if(All.AnisotropicKernel==1)
|
1065
|
+
{
|
1066
|
+
|
1067
|
+
for(k=0,temp2=0; k<ND; k++)
|
1068
|
+
{
|
1069
|
+
for(l=0,temp=0; l<ND; ++l)
|
1070
|
+
{
|
1071
|
+
#ifdef PERIODIC
|
1072
|
+
temp+=periodic((Part[i].Pos[l]-searchcenter[l]),All.boxh[l])*gmatrix[l][k]*metric1[l];
|
1073
|
+
#else
|
1074
|
+
temp+=(Part[i].Pos[l]-searchcenter[l])*gmatrix[l][k]*metric1[l];
|
1075
|
+
#endif
|
1076
|
+
}
|
1077
|
+
temp=temp*metric[k];
|
1078
|
+
temp2+=temp*temp;
|
1079
|
+
|
1080
|
+
}
|
1081
|
+
|
1082
|
+
}
|
1083
|
+
else
|
1084
|
+
{
|
1085
|
+
|
1086
|
+
|
1087
|
+
for(k=0,temp2=0; k<ND; ++k)
|
1088
|
+
{
|
1089
|
+
#ifdef PERIODIC
|
1090
|
+
temp1=periodic((Part[i].Pos[k]-searchcenter[k]),All.boxh[k])*metric[k];
|
1091
|
+
#else
|
1092
|
+
temp1=(Part[i].Pos[k]-searchcenter[k])*metric[k];
|
1093
|
+
#endif
|
1094
|
+
temp2+=temp1*temp1;
|
1095
|
+
}
|
1096
|
+
|
1097
|
+
}
|
1098
|
+
if(temp2 < pqHead->r)
|
1099
|
+
{
|
1100
|
+
pqHead->r=temp2; pqHead->p=i;
|
1101
|
+
adjust_heap(pqxA,desngb);
|
1102
|
+
}
|
1103
|
+
}
|
1104
|
+
|
1105
|
+
if((All.TypeOfSmoothing==4)||(All.TypeOfSmoothing==5))
|
1106
|
+
{
|
1107
|
+
for(k=0,r=0; k<ND; k++)
|
1108
|
+
{
|
1109
|
+
#ifdef PERIODIC
|
1110
|
+
temp=periodic((Part[i].Pos[k]-searchcenter[k]),All.boxh[k])*metric[k];
|
1111
|
+
#else
|
1112
|
+
temp=(Part[i].Pos[k]-searchcenter[k])*metric[k];
|
1113
|
+
#endif
|
1114
|
+
|
1115
|
+
if(temp<0) temp=-temp;
|
1116
|
+
if(r<temp) r=temp;
|
1117
|
+
}
|
1118
|
+
|
1119
|
+
if(r < pqHead->r)
|
1120
|
+
{
|
1121
|
+
pqHead->r=r; pqHead->p=i;
|
1122
|
+
for(k=0;k<ND;k++)
|
1123
|
+
pqHead->x[k]=Part[i].Pos[k];
|
1124
|
+
adjust_heap(pqxA,desngb);
|
1125
|
+
}
|
1126
|
+
|
1127
|
+
}
|
1128
|
+
|
1129
|
+
}
|
1130
|
+
|
1131
|
+
|
1132
|
+
|
1133
|
+
|
1134
|
+
if((All.TypeOfSmoothing==2)||(All.TypeOfSmoothing==3))
|
1135
|
+
{
|
1136
|
+
|
1137
|
+
// vector<float> rt;
|
1138
|
+
// for(i=0,rhoxyz=0; i<desngb; i++)
|
1139
|
+
// rt.push_back(sqrt(pqStartA[i].r/pqHead->r));
|
1140
|
+
// sort(rt.begin(),rt.end());
|
1141
|
+
|
1142
|
+
|
1143
|
+
for(i=0,rhoxyz=0; i<desngb; i++)
|
1144
|
+
{
|
1145
|
+
u = sqrt(pqStartA[i].r/pqHead->r);
|
1146
|
+
// u=rt[i];
|
1147
|
+
if(u<1)
|
1148
|
+
{
|
1149
|
+
if ((u==0) && (All.KernelBiasCorrection==1))
|
1150
|
+
u=ND/(1.0+ND);
|
1151
|
+
k = (int)(u*KERNEL_TABLE);
|
1152
|
+
wk =( Kernel[k] + (Kernel[k+1]-Kernel[k])*(u-KernelRad[k])*KERNEL_TABLE); rhoxyz+=wk*(Part[pqStartA[i].p].Mass);
|
1153
|
+
}
|
1154
|
+
// cout<<i<<" a "<<pqStartA[i].p<<" a "<<u<<endl;
|
1155
|
+
|
1156
|
+
|
1157
|
+
}
|
1158
|
+
temp=sqrt(pqHead->r);
|
1159
|
+
|
1160
|
+
for(k=0,r=1.0,wk=1.0;k<ND;k++)
|
1161
|
+
{
|
1162
|
+
r*=metric[k];
|
1163
|
+
if(All.AnisotropicKernel==1)
|
1164
|
+
r*=metric1[k];
|
1165
|
+
wk*=temp;
|
1166
|
+
}
|
1167
|
+
|
1168
|
+
}
|
1169
|
+
|
1170
|
+
if((All.TypeOfSmoothing==4)||(All.TypeOfSmoothing==5))
|
1171
|
+
{
|
1172
|
+
for(i=0,rhoxyz=0; i<desngb; i++)
|
1173
|
+
{
|
1174
|
+
|
1175
|
+
for(k=0,r=0; k<ND; k++)
|
1176
|
+
{
|
1177
|
+
xmax[k]=pqHead->r/metric[k];
|
1178
|
+
#ifdef PERIODIC
|
1179
|
+
xmin[k]=periodic((pqStartA[i].x[k] - searchcenter[k]),All.boxh[k]);
|
1180
|
+
#else
|
1181
|
+
xmin[k]=pqStartA[i].x[k] - searchcenter[k];
|
1182
|
+
#endif
|
1183
|
+
temp=(xmin[k])/xmax[k];
|
1184
|
+
if(temp<0) temp=-temp;
|
1185
|
+
xmin[k]=temp;
|
1186
|
+
r+=temp;
|
1187
|
+
}
|
1188
|
+
|
1189
|
+
for(l=0,wk=1.0;l<ND;l++)
|
1190
|
+
{
|
1191
|
+
u=xmin[l];
|
1192
|
+
|
1193
|
+
if ((r==0.0) && (All.KernelBiasCorrection==1))
|
1194
|
+
u=0.5;
|
1195
|
+
if(u<1)
|
1196
|
+
{
|
1197
|
+
k = (int)(u*KERNEL_TABLE);
|
1198
|
+
wk*=( Kernel[k] + (Kernel[k+1]-Kernel[k])*(u-KernelRad[k])*KERNEL_TABLE);
|
1199
|
+
|
1200
|
+
}
|
1201
|
+
else
|
1202
|
+
wk=0.0;
|
1203
|
+
}
|
1204
|
+
|
1205
|
+
rhoxyz+=Part[pqStartA[i].p].Mass*wk;
|
1206
|
+
}
|
1207
|
+
temp=(pqHead->r);
|
1208
|
+
|
1209
|
+
for(k=0,r=1.0,wk=1.0;k<ND;k++)
|
1210
|
+
{
|
1211
|
+
r*=metric[k];
|
1212
|
+
wk*=temp;
|
1213
|
+
}
|
1214
|
+
|
1215
|
+
}
|
1216
|
+
|
1217
|
+
|
1218
|
+
|
1219
|
+
|
1220
|
+
temp=r/wk;
|
1221
|
+
// cout<<rhoxyz<<" "<<r<<" "<<wk<<endl;
|
1222
|
+
rhoxyz*=temp;
|
1223
|
+
|
1224
|
+
// cout<<rhoxyz/All.hsv<<" "<<r<<" "<<wk<<endl;
|
1225
|
+
|
1226
|
+
return (rhoxyz/All.hsv);
|
1227
|
+
}
|
1228
|
+
|
1229
|
+
|
1230
|
+
|
1231
|
+
|
1232
|
+
|
1233
|
+
|
1234
|
+
|
1235
|
+
|
1236
|
+
float ngb_treedensity_sphere_nometric(float xyz[ND],struct NODE *nodes1, int desngb, struct pqueue* pqxA, struct linklist* pqStartA, bool *idoneA,bool *imarkA)
|
1237
|
+
{
|
1238
|
+
real u,wk,r; /* search radius */
|
1239
|
+
int i,j,k,th;
|
1240
|
+
float rhoxyz;
|
1241
|
+
double temp;
|
1242
|
+
struct linklist *pq;
|
1243
|
+
bool b1;
|
1244
|
+
struct pqueue ptemp;
|
1245
|
+
int hj,hi;
|
1246
|
+
|
1247
|
+
|
1248
|
+
/* calculate metric */
|
1249
|
+
|
1250
|
+
for(j=0; j<ND; j++)
|
1251
|
+
searchcenter[j]=xyz[j];
|
1252
|
+
|
1253
|
+
|
1254
|
+
/* identify the node containing the cell*/
|
1255
|
+
th=1;
|
1256
|
+
while(nodes1[th].count>desngb)
|
1257
|
+
{
|
1258
|
+
j=nodes1[th].k1;
|
1259
|
+
if(xyz[j] < nodes1[(LOWER(th,nodes1))].bnd->x[j][1])
|
1260
|
+
th=(LOWER(th,nodes1));
|
1261
|
+
else
|
1262
|
+
th=(UPPER(th,nodes1));
|
1263
|
+
}
|
1264
|
+
while(nodes1[th].count<desngb)
|
1265
|
+
{
|
1266
|
+
th=PARENT(th,nodes1);
|
1267
|
+
}
|
1268
|
+
|
1269
|
+
|
1270
|
+
if(pnew)
|
1271
|
+
{
|
1272
|
+
|
1273
|
+
for(pq=pqStartA;pq<(pqStartA+desngb);pq++)
|
1274
|
+
imarkA[pq->p]=0;
|
1275
|
+
|
1276
|
+
for(pq=pqStartA,j=0;pq<(pqStartA+desngb);j++,pq++)
|
1277
|
+
{
|
1278
|
+
i=nodes1[th].lid+j;
|
1279
|
+
pq->p=i;
|
1280
|
+
for(k=0; k<ND; k++)
|
1281
|
+
pq->x[k]=Part[i].Pos[k];
|
1282
|
+
imarkA[i]=1;
|
1283
|
+
}
|
1284
|
+
}
|
1285
|
+
|
1286
|
+
|
1287
|
+
for(pq=pqStartA,i=0;pq<(pqStartA+desngb);++i,pq++)
|
1288
|
+
{
|
1289
|
+
for(j=0,pq->r=0.0; j<ND; j++)
|
1290
|
+
{
|
1291
|
+
|
1292
|
+
#ifdef PERIODIC
|
1293
|
+
temp=periodic((pq->x[j]-searchcenter[j]),All.boxh[j]);
|
1294
|
+
#else
|
1295
|
+
temp=pq->x[j]-searchcenter[j];
|
1296
|
+
#endif
|
1297
|
+
pq->r+=temp*temp;
|
1298
|
+
}
|
1299
|
+
pqxA[desngb-i-1].pq=pq;
|
1300
|
+
}
|
1301
|
+
|
1302
|
+
|
1303
|
+
make_heap(pqxA,(pqxA+desngb)); pqHead=pqxA->pq;
|
1304
|
+
|
1305
|
+
|
1306
|
+
for(k=0; k<ND; k++)
|
1307
|
+
{
|
1308
|
+
temp=sqrt(pqHead->r);
|
1309
|
+
searchx[k][0]=searchcenter[k]-temp;
|
1310
|
+
searchx[k][1]=searchcenter[k]+temp;
|
1311
|
+
}
|
1312
|
+
|
1313
|
+
b1=0;
|
1314
|
+
if (pnew) k=desngb; else k=0;
|
1315
|
+
for(j=k; j<nodes1[th].count; j++)
|
1316
|
+
{
|
1317
|
+
i=nodes1[th].lid+j;
|
1318
|
+
if(imarkA[i]) continue;
|
1319
|
+
for(k=0,r=0; k<ND; k++)
|
1320
|
+
{
|
1321
|
+
#ifdef PERIODIC
|
1322
|
+
temp=periodic((Part[i].Pos[k]-searchcenter[k]),All.boxh[k]);
|
1323
|
+
#else
|
1324
|
+
temp=(Part[i].Pos[k]-searchcenter[k]);
|
1325
|
+
#endif
|
1326
|
+
|
1327
|
+
r+=temp*temp;
|
1328
|
+
}
|
1329
|
+
|
1330
|
+
if(r < pqHead->r)
|
1331
|
+
{
|
1332
|
+
imarkA[pqHead->p]=0; imarkA[i]=1;
|
1333
|
+
pqHead->r=r; pqHead->p=i;
|
1334
|
+
for(k=0;k<ND;k++)
|
1335
|
+
pqHead->x[k]=Part[i].Pos[k];
|
1336
|
+
adjust_heap(pqxA,desngb); b1=1;
|
1337
|
+
}
|
1338
|
+
|
1339
|
+
}
|
1340
|
+
if(b1)
|
1341
|
+
for(k=0; k<ND; k++)
|
1342
|
+
{
|
1343
|
+
temp=sqrt(pqHead->r);
|
1344
|
+
searchx[k][0]=searchcenter[k]-temp;
|
1345
|
+
searchx[k][1]=searchcenter[k]+temp;
|
1346
|
+
}
|
1347
|
+
|
1348
|
+
|
1349
|
+
ngb_treesearch_sphere_nometric(th,nodes1,desngb/2,desngb,pqxA,imarkA);
|
1350
|
+
|
1351
|
+
|
1352
|
+
|
1353
|
+
//----------------------------------------
|
1354
|
+
|
1355
|
+
|
1356
|
+
//----------------------------------------
|
1357
|
+
|
1358
|
+
|
1359
|
+
|
1360
|
+
pnext=pqHead->p;
|
1361
|
+
r=pqHead->r;
|
1362
|
+
|
1363
|
+
// vector<float> rt;
|
1364
|
+
// for(i=0,rhoxyz=0; i<desngb; i++)
|
1365
|
+
// rt.push_back(sqrt(pqStartA[i].r/pqHead->r));
|
1366
|
+
// sort(rt.begin(),rt.end());
|
1367
|
+
|
1368
|
+
|
1369
|
+
for(i=0,rhoxyz=0; i<desngb; i++)
|
1370
|
+
{
|
1371
|
+
|
1372
|
+
u = sqrt(pqStartA[i].r/pqHead->r);
|
1373
|
+
// u=rt[i];
|
1374
|
+
if(u<1)
|
1375
|
+
{
|
1376
|
+
if ((u==0) && (All.KernelBiasCorrection==1))
|
1377
|
+
u=ND/(1.0+ND);
|
1378
|
+
k = (int)(u*KERNEL_TABLE);
|
1379
|
+
wk =( Kernel[k] + (Kernel[k+1]-Kernel[k])*(u-KernelRad[k])*KERNEL_TABLE); rhoxyz+=wk*(Part[pqStartA[i].p].Mass);
|
1380
|
+
}
|
1381
|
+
|
1382
|
+
// cout<<i<<" b "<<pqStartA[i].p<<" a "<<u<<endl;
|
1383
|
+
|
1384
|
+
if(idoneA[pqStartA[i].p]==0)
|
1385
|
+
if(pqStartA[i].r<r)
|
1386
|
+
{pnext=pqStartA[i].p;r=pqStartA[i].r;}
|
1387
|
+
|
1388
|
+
}
|
1389
|
+
if(idoneA[pnext]==1) pnew=1; else pnew=0;
|
1390
|
+
|
1391
|
+
temp=sqrt(pqHead->r);
|
1392
|
+
for(k=0,r=1.0,wk=1.0;k<ND;k++)
|
1393
|
+
{
|
1394
|
+
// r*=metric[k];
|
1395
|
+
wk*=temp;
|
1396
|
+
}
|
1397
|
+
temp=r/wk;
|
1398
|
+
// cout<<rhoxyz<<" "<<r<<" "<<wk<<endl;
|
1399
|
+
rhoxyz*=temp;
|
1400
|
+
// cout<<rhoxyz<<" "<<All.hsv<<" "<<r/wk<<endl;
|
1401
|
+
|
1402
|
+
|
1403
|
+
return rhoxyz;
|
1404
|
+
}
|
1405
|
+
|
1406
|
+
|
1407
|
+
|
1408
|
+
|
1409
|
+
float ngb_treedensity_sphere_metric_exact_h(float xyz[ND],struct NODE *nodes1, int desngb, struct linklist* pqStartA,bool *imarkA)
|
1410
|
+
{
|
1411
|
+
real u,wk,r; /* search radius */
|
1412
|
+
int i,j,k,th;
|
1413
|
+
float rhoxyz;
|
1414
|
+
double temp,temp1;
|
1415
|
+
struct linklist *pq;
|
1416
|
+
vector<class rmlist> rmlistv;
|
1417
|
+
class rmlist rmliste;
|
1418
|
+
|
1419
|
+
/* calculate metric */
|
1420
|
+
|
1421
|
+
for(j=0; j<ND; j++)
|
1422
|
+
searchcenter[j]=xyz[j];
|
1423
|
+
|
1424
|
+
|
1425
|
+
// rmlistv.clear();
|
1426
|
+
|
1427
|
+
for(pq=pqStartA,i=0;pq<(pqStartA+desngb);++i,pq++)
|
1428
|
+
{
|
1429
|
+
for(j=0,temp1=0.0; j<ND; j++)
|
1430
|
+
{
|
1431
|
+
|
1432
|
+
#ifdef PERIODIC
|
1433
|
+
temp=periodic((pq->x[j]-searchcenter[j]),All.boxh[j])*metric[j];
|
1434
|
+
#else
|
1435
|
+
temp=(pq->x[j]-searchcenter[j])*metric[j];
|
1436
|
+
#endif
|
1437
|
+
temp1+=temp*temp;
|
1438
|
+
}
|
1439
|
+
imarkA[pq->p]=1;
|
1440
|
+
rmliste.r=temp1;
|
1441
|
+
rmliste.Mass=Part[pq->p].Mass;
|
1442
|
+
rmlistv.push_back(rmliste);
|
1443
|
+
}
|
1444
|
+
|
1445
|
+
|
1446
|
+
/* identify the node containing the cell*/
|
1447
|
+
th=1;
|
1448
|
+
while(nodes1[th].count>desngb)
|
1449
|
+
{
|
1450
|
+
j=nodes1[th].k1;
|
1451
|
+
if(xyz[j] < nodes1[(LOWER(th,nodes1))].bnd->x[j][1])
|
1452
|
+
th=(LOWER(th,nodes1));
|
1453
|
+
else
|
1454
|
+
th=(UPPER(th,nodes1));
|
1455
|
+
}
|
1456
|
+
while(nodes1[th].count<desngb)
|
1457
|
+
{
|
1458
|
+
th=PARENT(th,nodes1);
|
1459
|
+
}
|
1460
|
+
|
1461
|
+
|
1462
|
+
|
1463
|
+
for(k=0; k<ND; k++)
|
1464
|
+
{
|
1465
|
+
temp=1/metric[k];
|
1466
|
+
searchx[k][0]=searchcenter[k]-temp;
|
1467
|
+
searchx[k][1]=searchcenter[k]+temp;
|
1468
|
+
}
|
1469
|
+
|
1470
|
+
|
1471
|
+
k=0;
|
1472
|
+
for(j=k; j<nodes1[th].count; j++)
|
1473
|
+
{
|
1474
|
+
i=nodes1[th].lid+j;
|
1475
|
+
if(imarkA[i]) continue;
|
1476
|
+
for(k=0,r=0; k<ND; k++)
|
1477
|
+
{
|
1478
|
+
#ifdef PERIODIC
|
1479
|
+
temp=periodic((Part[i].Pos[k]-searchcenter[k]),All.boxh[k])*metric[k];
|
1480
|
+
#else
|
1481
|
+
temp=(Part[i].Pos[k]-searchcenter[k])*metric[k];
|
1482
|
+
#endif
|
1483
|
+
r+=temp*temp;
|
1484
|
+
}
|
1485
|
+
if(r < 1.0)
|
1486
|
+
{
|
1487
|
+
rmliste.r=r;rmliste.Mass=Part[i].Mass;
|
1488
|
+
rmlistv.push_back(rmliste);
|
1489
|
+
}
|
1490
|
+
}
|
1491
|
+
|
1492
|
+
|
1493
|
+
ngb_treesearch_sphere_metric_exact_h(th,nodes1,desngb/2,rmlistv,imarkA);
|
1494
|
+
|
1495
|
+
|
1496
|
+
|
1497
|
+
//----------------------------------------
|
1498
|
+
|
1499
|
+
|
1500
|
+
//----------------------------------------
|
1501
|
+
|
1502
|
+
|
1503
|
+
|
1504
|
+
for(i=0,rhoxyz=0; i<int(rmlistv.size()); i++)
|
1505
|
+
{
|
1506
|
+
u = sqrt(rmlistv[i].r);
|
1507
|
+
if(u<1)
|
1508
|
+
{
|
1509
|
+
if ((u==0) && (All.KernelBiasCorrection==1))
|
1510
|
+
u=ND/(1.0+ND);
|
1511
|
+
k = (int)(u*KERNEL_TABLE);
|
1512
|
+
wk =( Kernel[k] + (Kernel[k+1]-Kernel[k])*(u-KernelRad[k])*KERNEL_TABLE); rhoxyz+=wk*rmlistv[i].Mass;
|
1513
|
+
}
|
1514
|
+
|
1515
|
+
}
|
1516
|
+
|
1517
|
+
for(k=0,r=1.0,wk=1.0;k<ND;k++)
|
1518
|
+
{
|
1519
|
+
r*=metric[k];
|
1520
|
+
}
|
1521
|
+
temp=r/wk;
|
1522
|
+
// cout<<rhoxyz<<" "<<r<<" "<<wk<<endl;
|
1523
|
+
rhoxyz*=temp;
|
1524
|
+
// cout<<rhoxyz<<" "<<All.hsv<<" "<<r/wk<<endl;
|
1525
|
+
|
1526
|
+
|
1527
|
+
for(pq=pqStartA,i=0;pq<(pqStartA+desngb);++i,pq++)
|
1528
|
+
imarkA[pq->p]=0;
|
1529
|
+
|
1530
|
+
|
1531
|
+
return rhoxyz;
|
1532
|
+
}
|
1533
|
+
|
1534
|
+
|
1535
|
+
|
1536
|
+
|
1537
|
+
|
1538
|
+
float ngb_treedensity_box_metric(float xyz[ND],struct NODE *nodes1, int desngb, struct pqueue* pqxA, struct linklist* pqStartA, bool *idoneA,bool *imarkA)
|
1539
|
+
{
|
1540
|
+
real u,wk,r; /* search radius */
|
1541
|
+
int i,j,k,th,l;
|
1542
|
+
float rhoxyz;
|
1543
|
+
real xmin[ND],xmax[ND],temp,temp1;
|
1544
|
+
struct linklist *pq;
|
1545
|
+
bool b1,b2=1;
|
1546
|
+
int b3=1;
|
1547
|
+
struct pqueue ptemp;
|
1548
|
+
int hj,hi;
|
1549
|
+
|
1550
|
+
/* calculate metric */
|
1551
|
+
for(j=0; j<ND; j++)
|
1552
|
+
metric[j]=1.0;
|
1553
|
+
|
1554
|
+
if(All.TypeOfSmoothing==5)
|
1555
|
+
{
|
1556
|
+
if(All.CubicCells==1)
|
1557
|
+
{
|
1558
|
+
if(ND==6)
|
1559
|
+
{
|
1560
|
+
|
1561
|
+
|
1562
|
+
// th=1;
|
1563
|
+
// while(nodes1[th].count>1)
|
1564
|
+
// {
|
1565
|
+
// j=nodes1[th].k1;
|
1566
|
+
// if(xyz[j] < nodes1[LOWER(th,nodes1)].bnd->x[j][1])
|
1567
|
+
// th=LOWER(th,nodes1);
|
1568
|
+
// else
|
1569
|
+
// th=UPPER(th,nodes1);
|
1570
|
+
// }
|
1571
|
+
// for(j=0; j<ND; j++)
|
1572
|
+
// {
|
1573
|
+
// metric[j]=(nodes1[th].bnd->x[j][1]-nodes1[th].bnd->x[j][0]);
|
1574
|
+
// }
|
1575
|
+
|
1576
|
+
|
1577
|
+
for(j=0; j<ND; j++)
|
1578
|
+
searchcenter[j]=0.0;
|
1579
|
+
ngb_calculate_metric(xyz,nodes1);
|
1580
|
+
for(j=0; j<ND; j++)
|
1581
|
+
{
|
1582
|
+
metric[j]=searchcenter[j];
|
1583
|
+
}
|
1584
|
+
|
1585
|
+
|
1586
|
+
for(j=0,temp=1.0; j<3; j++)
|
1587
|
+
temp*=(metric[j]);
|
1588
|
+
temp=pow(temp,0.3333);
|
1589
|
+
for(j=0; j<3; j++)
|
1590
|
+
metric[j]=1/temp;
|
1591
|
+
|
1592
|
+
for(j=3,temp=1.0; j<6; j++)
|
1593
|
+
temp*=(metric[j]);
|
1594
|
+
temp=pow(temp,0.3333);
|
1595
|
+
for(j=3; j<6; j++)
|
1596
|
+
metric[j]=1/temp;
|
1597
|
+
}
|
1598
|
+
}
|
1599
|
+
else
|
1600
|
+
{
|
1601
|
+
for(j=0; j<ND; j++)
|
1602
|
+
searchcenter[j]=0.0;
|
1603
|
+
ngb_calculate_metric(xyz,nodes1);
|
1604
|
+
for(j=0; j<ND; j++)
|
1605
|
+
{
|
1606
|
+
metric[j]=1.0/searchcenter[j];
|
1607
|
+
}
|
1608
|
+
}
|
1609
|
+
}
|
1610
|
+
|
1611
|
+
|
1612
|
+
for(j=0; j<ND; j++)
|
1613
|
+
searchcenter[j]=xyz[j];
|
1614
|
+
|
1615
|
+
|
1616
|
+
while(b2)
|
1617
|
+
{
|
1618
|
+
/* identify the node containing the cell*/
|
1619
|
+
th=1;
|
1620
|
+
while(nodes1[th].count>desngb)
|
1621
|
+
{
|
1622
|
+
j=nodes1[th].k1;
|
1623
|
+
if(xyz[j] < nodes1[(LOWER(th,nodes1))].bnd->x[j][1])
|
1624
|
+
th=(LOWER(th,nodes1));
|
1625
|
+
else
|
1626
|
+
th=(UPPER(th,nodes1));
|
1627
|
+
}
|
1628
|
+
while(nodes1[th].count<desngb)
|
1629
|
+
{
|
1630
|
+
th=PARENT(th,nodes1);
|
1631
|
+
}
|
1632
|
+
|
1633
|
+
|
1634
|
+
if(pnew)
|
1635
|
+
{
|
1636
|
+
for(pq=pqStartA;pq<(pqStartA+desngb);pq++)
|
1637
|
+
imarkA[pq->p]=0;
|
1638
|
+
|
1639
|
+
for(pq=pqStartA,j=0;pq<(pqStartA+desngb);j++,pq++)
|
1640
|
+
{
|
1641
|
+
i=nodes1[th].lid+j;
|
1642
|
+
pq->p=i;
|
1643
|
+
for(k=0; k<ND; k++)
|
1644
|
+
pq->x[k]=Part[i].Pos[k];
|
1645
|
+
imarkA[i]=1;
|
1646
|
+
}
|
1647
|
+
}
|
1648
|
+
|
1649
|
+
for(pq=pqStartA,i=0;pq<(pqStartA+desngb);++i,pq++)
|
1650
|
+
{
|
1651
|
+
for(j=0,pq->r=0.0; j<ND; j++)
|
1652
|
+
{
|
1653
|
+
#ifdef PERIODIC
|
1654
|
+
temp=periodic((pq->x[j]-searchcenter[j]),All.boxh[j])*metric[j];
|
1655
|
+
#else
|
1656
|
+
temp=(pq->x[j]-searchcenter[j])*metric[j];
|
1657
|
+
#endif
|
1658
|
+
if(temp<0) temp=-temp;
|
1659
|
+
if(pq->r<temp) pq->r=temp;
|
1660
|
+
}
|
1661
|
+
pqxA[desngb-i-1].pq=pq;
|
1662
|
+
}
|
1663
|
+
|
1664
|
+
|
1665
|
+
make_heap(pqxA,(pqxA+desngb)); pqHead=pqxA->pq;
|
1666
|
+
|
1667
|
+
for(k=0; k<ND; k++)
|
1668
|
+
{
|
1669
|
+
temp=pqHead->r/metric[k];
|
1670
|
+
searchx[k][0]=searchcenter[k]-temp;
|
1671
|
+
searchx[k][1]=searchcenter[k]+temp;
|
1672
|
+
}
|
1673
|
+
|
1674
|
+
|
1675
|
+
b1=0;
|
1676
|
+
if (pnew) k=desngb; else k=0;
|
1677
|
+
for(j=0; j<nodes1[th].count; j++)
|
1678
|
+
{
|
1679
|
+
i=nodes1[th].lid+j;
|
1680
|
+
if(imarkA[i]) continue;
|
1681
|
+
for(k=0,r=0; k<ND; k++)
|
1682
|
+
{
|
1683
|
+
#ifdef PERIODIC
|
1684
|
+
temp=periodic((Part[i].Pos[k]-searchcenter[k]),All.boxh[k])*metric[k];
|
1685
|
+
#else
|
1686
|
+
temp=(Part[i].Pos[k]-searchcenter[k])*metric[k];
|
1687
|
+
#endif
|
1688
|
+
|
1689
|
+
if(temp<0) temp=-temp;
|
1690
|
+
if(r<temp) r=temp;
|
1691
|
+
}
|
1692
|
+
|
1693
|
+
if(r < pqHead->r)
|
1694
|
+
{
|
1695
|
+
imarkA[pqHead->p]=0; imarkA[i]=1;
|
1696
|
+
pqHead->r=r; pqHead->p=i;
|
1697
|
+
for(k=0;k<ND;k++)
|
1698
|
+
pqHead->x[k]=Part[i].Pos[k];
|
1699
|
+
adjust_heap(pqxA,desngb); b1=1;
|
1700
|
+
}
|
1701
|
+
|
1702
|
+
}
|
1703
|
+
if(b1)
|
1704
|
+
for(k=0; k<ND; k++)
|
1705
|
+
{
|
1706
|
+
temp=pqHead->r/metric[k];
|
1707
|
+
searchx[k][0]=searchcenter[k]-temp;
|
1708
|
+
searchx[k][1]=searchcenter[k]+temp;
|
1709
|
+
}
|
1710
|
+
|
1711
|
+
|
1712
|
+
|
1713
|
+
|
1714
|
+
ngb_treesearch_box_metric(th,nodes1,desngb/2,desngb,pqxA,imarkA);
|
1715
|
+
|
1716
|
+
//----------------------------------------
|
1717
|
+
|
1718
|
+
|
1719
|
+
if(All.TypeOfSmoothing==4) b3=2;
|
1720
|
+
b2=0;
|
1721
|
+
if(b3<2)
|
1722
|
+
if(All.VolCorr==1)
|
1723
|
+
{
|
1724
|
+
|
1725
|
+
#ifdef PERIODIC
|
1726
|
+
|
1727
|
+
for(i=0; i<desngb; i++)
|
1728
|
+
{
|
1729
|
+
|
1730
|
+
for(k=0; k<ND; k++)
|
1731
|
+
{
|
1732
|
+
temp=periodic((pqStartA[i].x[k]-searchcenter[k]),All.boxh[k]);
|
1733
|
+
if((i==0)||(temp<xmin[k])) xmin[k]=temp;
|
1734
|
+
if((i==0)||(temp>xmax[k])) xmax[k]=temp;
|
1735
|
+
}
|
1736
|
+
}
|
1737
|
+
|
1738
|
+
for(k=0; k<ND; k++)
|
1739
|
+
{
|
1740
|
+
xmin[k]+=searchcenter[k];
|
1741
|
+
xmax[k]+=searchcenter[k];
|
1742
|
+
|
1743
|
+
}
|
1744
|
+
#else
|
1745
|
+
for(i=0; i<desngb; i++)
|
1746
|
+
{
|
1747
|
+
|
1748
|
+
for(k=0; k<ND; k++)
|
1749
|
+
{
|
1750
|
+
if((i==0)||(pqStartA[i].x[k]<xmin[k])) xmin[k]=pqStartA[i].x[k];
|
1751
|
+
if((i==0)||(pqStartA[i].x[k]>xmax[k])) xmax[k]=pqStartA[i].x[k];
|
1752
|
+
}
|
1753
|
+
}
|
1754
|
+
#endif
|
1755
|
+
|
1756
|
+
|
1757
|
+
for(k=0; k<ND; k++)
|
1758
|
+
{
|
1759
|
+
temp=sqrt(pqHead->r)/metric[k];
|
1760
|
+
searchx[k][0]=searchcenter[k]-temp;
|
1761
|
+
searchx[k][1]=searchcenter[k]+temp;
|
1762
|
+
}
|
1763
|
+
|
1764
|
+
for(k=0;k<ND;k++)
|
1765
|
+
{
|
1766
|
+
|
1767
|
+
if(All.CubicCells==1)
|
1768
|
+
temp1=(xmax[k]-xmin[k])*15.0/(All.DesNumNgb);
|
1769
|
+
else
|
1770
|
+
temp1=(xmax[k]-xmin[k])*15.0/(All.DesNumNgb);
|
1771
|
+
|
1772
|
+
if(((searchx[k][1]-xmax[k])>temp1)&&((xmin[k]-searchx[k][0])>temp1))
|
1773
|
+
{
|
1774
|
+
b2=1;
|
1775
|
+
}
|
1776
|
+
|
1777
|
+
}
|
1778
|
+
|
1779
|
+
if(b2)
|
1780
|
+
for(k=0;k<ND;k++)
|
1781
|
+
{
|
1782
|
+
// temp=(xmax[k]-xmin[k])*0.5;
|
1783
|
+
// metric[k]=1/temp;
|
1784
|
+
temp=(xmax[k]-xmin[k])*0.5;
|
1785
|
+
if(xmax[k]!=xmin[k])
|
1786
|
+
{
|
1787
|
+
metric[k]=1/temp;
|
1788
|
+
}
|
1789
|
+
else
|
1790
|
+
metric[k]=1/(searchx[k][1]-searchx[k][0]);
|
1791
|
+
|
1792
|
+
|
1793
|
+
}
|
1794
|
+
|
1795
|
+
// if(b3>5)
|
1796
|
+
// cout<<b3<<endl;
|
1797
|
+
b3++;
|
1798
|
+
}
|
1799
|
+
}
|
1800
|
+
|
1801
|
+
//----------------------------------------
|
1802
|
+
|
1803
|
+
|
1804
|
+
|
1805
|
+
|
1806
|
+
pnext=pqHead->p;
|
1807
|
+
r=pqHead->r;
|
1808
|
+
|
1809
|
+
|
1810
|
+
for(i=0,rhoxyz=0; i<desngb; i++)
|
1811
|
+
{
|
1812
|
+
|
1813
|
+
for(k=0,r=0; k<ND; k++)
|
1814
|
+
{
|
1815
|
+
xmax[k]=pqHead->r/metric[k];
|
1816
|
+
#ifdef PERIODIC
|
1817
|
+
xmin[k]=periodic((pqStartA[i].x[k] - searchcenter[k]),All.boxh[k]);
|
1818
|
+
#else
|
1819
|
+
xmin[k]=pqStartA[i].x[k] - searchcenter[k];
|
1820
|
+
#endif
|
1821
|
+
temp=(xmin[k])/xmax[k];
|
1822
|
+
if(temp<0) temp=-temp;
|
1823
|
+
xmin[k]=temp;
|
1824
|
+
r+=temp;
|
1825
|
+
}
|
1826
|
+
|
1827
|
+
for(l=0,wk=1.0;l<ND;l++)
|
1828
|
+
{
|
1829
|
+
u=xmin[l];
|
1830
|
+
|
1831
|
+
if ((r==0.0) && (All.KernelBiasCorrection==1))
|
1832
|
+
u=0.5;
|
1833
|
+
if(u<1)
|
1834
|
+
{
|
1835
|
+
k = (int)(u*KERNEL_TABLE);
|
1836
|
+
wk*=( Kernel[k] + (Kernel[k+1]-Kernel[k])*(u-KernelRad[k])*KERNEL_TABLE);
|
1837
|
+
|
1838
|
+
}
|
1839
|
+
else
|
1840
|
+
wk=0.0;
|
1841
|
+
}
|
1842
|
+
|
1843
|
+
|
1844
|
+
|
1845
|
+
rhoxyz+=Part[pqStartA[i].p].Mass*wk;
|
1846
|
+
|
1847
|
+
|
1848
|
+
|
1849
|
+
if(idoneA[pqStartA[i].p]==0)
|
1850
|
+
if(pqStartA[i].r<r)
|
1851
|
+
{pnext=pqStartA[i].p;r=pqStartA[i].r;}
|
1852
|
+
|
1853
|
+
|
1854
|
+
|
1855
|
+
}
|
1856
|
+
if(idoneA[pnext]==1) pnew=1; else pnew=0;
|
1857
|
+
|
1858
|
+
|
1859
|
+
temp=pqHead->r;
|
1860
|
+
for(k=0,r=1.0,wk=1.0;k<ND;k++)
|
1861
|
+
{
|
1862
|
+
r*=metric[k];
|
1863
|
+
wk*=temp;
|
1864
|
+
}
|
1865
|
+
temp=r/wk;
|
1866
|
+
// cout<<rhoxyz<<" "<<r<<" "<<wk<<endl;
|
1867
|
+
rhoxyz*=temp;
|
1868
|
+
|
1869
|
+
|
1870
|
+
// cout<<"density"<<rhoxyz<<endl;
|
1871
|
+
// endrun(10);
|
1872
|
+
|
1873
|
+
return rhoxyz;
|
1874
|
+
}
|
1875
|
+
|
1876
|
+
|
1877
|
+
|
1878
|
+
|
1879
|
+
|
1880
|
+
|
1881
|
+
|
1882
|
+
|
1883
|
+
float ngb_treedensity_sphere_gmatrix(float xyz[ND],struct NODE *nodes1, int desngb, struct pqueue* pqxA, struct linklist* pqStartA, bool *idoneA,bool *imarkA)
|
1884
|
+
{
|
1885
|
+
real u,wk,r; /* search radius */
|
1886
|
+
int i,j,k,th,l;
|
1887
|
+
float rhoxyz;
|
1888
|
+
double temp;
|
1889
|
+
struct linklist *pq;
|
1890
|
+
bool b1;
|
1891
|
+
|
1892
|
+
|
1893
|
+
struct pqueue ptemp;
|
1894
|
+
int hj,hi;
|
1895
|
+
|
1896
|
+
/* calculate metric */
|
1897
|
+
|
1898
|
+
for(j=0; j<ND; j++)
|
1899
|
+
searchcenter[j]=xyz[j];
|
1900
|
+
|
1901
|
+
|
1902
|
+
/* identify the node containing the cell*/
|
1903
|
+
th=1;
|
1904
|
+
while(nodes1[th].count>desngb)
|
1905
|
+
{
|
1906
|
+
j=nodes1[th].k1;
|
1907
|
+
if(xyz[j] < nodes1[(LOWER(th,nodes1))].bnd->x[j][1])
|
1908
|
+
th=(LOWER(th,nodes1));
|
1909
|
+
else
|
1910
|
+
th=(UPPER(th,nodes1));
|
1911
|
+
}
|
1912
|
+
while(nodes1[th].count<desngb)
|
1913
|
+
{
|
1914
|
+
th=PARENT(th,nodes1);
|
1915
|
+
}
|
1916
|
+
|
1917
|
+
// pnew=1;
|
1918
|
+
if(pnew)
|
1919
|
+
{
|
1920
|
+
for(pq=pqStartA,j=0;pq<(pqStartA+desngb);j++,pq++)
|
1921
|
+
{
|
1922
|
+
i=nodes1[th].lid+j;
|
1923
|
+
if(imarkA[i]==1) continue;
|
1924
|
+
imarkA[pq->p]=0;
|
1925
|
+
pq->p=i;
|
1926
|
+
for(k=0; k<ND; k++)
|
1927
|
+
pq->x[k]=Part[i].Pos[k];
|
1928
|
+
imarkA[i]=1;
|
1929
|
+
}
|
1930
|
+
}
|
1931
|
+
|
1932
|
+
for(pq=pqStartA,i=0;pq<(pqStartA+desngb);++i,pq++)
|
1933
|
+
{
|
1934
|
+
for(j=0,pq->r=0.0; j<ND; j++)
|
1935
|
+
{
|
1936
|
+
for(l=0,temp=0; l<ND; ++l)
|
1937
|
+
{
|
1938
|
+
#ifdef PERIODIC
|
1939
|
+
temp+=periodic((pq->x[l]-searchcenter[l]),All.boxh[l])*gmatrix[l][j]*metric1[l];
|
1940
|
+
#else
|
1941
|
+
temp+=(pq->x[l]-searchcenter[l])*gmatrix[l][j]*metric1[l];
|
1942
|
+
#endif
|
1943
|
+
}
|
1944
|
+
|
1945
|
+
temp=temp*metric[j];
|
1946
|
+
pq->r+=temp*temp;
|
1947
|
+
}
|
1948
|
+
pqxA[desngb-i-1].pq=pq;
|
1949
|
+
}
|
1950
|
+
|
1951
|
+
|
1952
|
+
make_heap(pqxA,(pqxA+desngb)); pqHead=pqxA->pq;
|
1953
|
+
|
1954
|
+
for(k=0; k<ND; k++)
|
1955
|
+
{
|
1956
|
+
temp=sqrt(pqHead->r)/metric1[k];
|
1957
|
+
searchx[k][0]=searchcenter[k]-temp;
|
1958
|
+
searchx[k][1]=searchcenter[k]+temp;
|
1959
|
+
}
|
1960
|
+
|
1961
|
+
|
1962
|
+
b1=0;
|
1963
|
+
if (pnew) k=desngb; else k=0;
|
1964
|
+
for(j=0; j<nodes1[th].count; j++)
|
1965
|
+
{
|
1966
|
+
i=nodes1[th].lid+j;
|
1967
|
+
if(imarkA[i]) continue;
|
1968
|
+
for(k=0,r=0; k<ND; k++)
|
1969
|
+
{
|
1970
|
+
for(l=0,temp=0; l<ND; ++l)
|
1971
|
+
{
|
1972
|
+
#ifdef PERIODIC
|
1973
|
+
temp+=periodic((Part[i].Pos[l]-searchcenter[l]),All.boxh[l])*gmatrix[l][k]*metric1[l];
|
1974
|
+
#else
|
1975
|
+
temp+=(Part[i].Pos[l]-searchcenter[l])*gmatrix[l][k]*metric1[l];
|
1976
|
+
#endif
|
1977
|
+
}
|
1978
|
+
temp=temp*metric[k];
|
1979
|
+
r+=temp*temp;
|
1980
|
+
|
1981
|
+
}
|
1982
|
+
|
1983
|
+
if(r < pqHead->r)
|
1984
|
+
{
|
1985
|
+
imarkA[pqHead->p]=0; imarkA[i]=1;
|
1986
|
+
pqHead->r=r; pqHead->p=i;
|
1987
|
+
for(k=0;k<ND;k++)
|
1988
|
+
pqHead->x[k]=Part[i].Pos[k];
|
1989
|
+
adjust_heap(pqxA,desngb); b1=1;
|
1990
|
+
|
1991
|
+
}
|
1992
|
+
|
1993
|
+
}
|
1994
|
+
if(b1)
|
1995
|
+
for(k=0; k<ND; k++)
|
1996
|
+
{
|
1997
|
+
temp=sqrt(pqHead->r)/metric1[k];
|
1998
|
+
searchx[k][0]=searchcenter[k]-temp;
|
1999
|
+
searchx[k][1]=searchcenter[k]+temp;
|
2000
|
+
}
|
2001
|
+
|
2002
|
+
// cout<<" c "<<pqHead->r<<endl;
|
2003
|
+
|
2004
|
+
|
2005
|
+
ngb_treesearch_sphere_gmatrix(th,nodes1,desngb/2,desngb,pqxA,imarkA);
|
2006
|
+
//----------------------------------------
|
2007
|
+
|
2008
|
+
pnext=pqHead->p;
|
2009
|
+
r=pqHead->r;
|
2010
|
+
|
2011
|
+
|
2012
|
+
for(k=0,temp=metric[0];k<ND;k++)
|
2013
|
+
if(temp>metric[k]) temp=metric[k];
|
2014
|
+
|
2015
|
+
|
2016
|
+
// int ii=0;
|
2017
|
+
for(i=0,rhoxyz=0; i<desngb; i++)
|
2018
|
+
{
|
2019
|
+
|
2020
|
+
|
2021
|
+
u = sqrt(pqStartA[i].r/pqHead->r);
|
2022
|
+
|
2023
|
+
|
2024
|
+
if(u<1)
|
2025
|
+
{
|
2026
|
+
if ((u==0) && (All.KernelBiasCorrection==1))
|
2027
|
+
u=ND/(1.0+ND);
|
2028
|
+
k = (int)(u*KERNEL_TABLE);
|
2029
|
+
wk =( Kernel[k] + (Kernel[k+1]-Kernel[k])*(u-KernelRad[k])*KERNEL_TABLE); rhoxyz+=wk*Part[pqStartA[i].p].Mass;
|
2030
|
+
}
|
2031
|
+
|
2032
|
+
// cout<<i<<" "<<pqStartA[i].p<<" a "<<u<<endl;
|
2033
|
+
|
2034
|
+
|
2035
|
+
if(idoneA[pqStartA[i].p]==0)
|
2036
|
+
if(pqStartA[i].r<r)
|
2037
|
+
{pnext=pqStartA[i].p;r=pqStartA[i].r;}
|
2038
|
+
// cout<<pqStartA[i].p<<" b "<<u<<endl;
|
2039
|
+
|
2040
|
+
}
|
2041
|
+
if(idoneA[pnext]==1) pnew=1; else pnew=0;
|
2042
|
+
|
2043
|
+
|
2044
|
+
temp=sqrt(pqHead->r);
|
2045
|
+
for(k=0,r=1.0,wk=1.0;k<ND;k++)
|
2046
|
+
{
|
2047
|
+
r*=metric[k]*metric1[k];
|
2048
|
+
wk*=temp;
|
2049
|
+
}
|
2050
|
+
temp=r/wk;
|
2051
|
+
// cout<<rhoxyz<<" "<<r<<" "<<wk<<endl;
|
2052
|
+
rhoxyz*=temp;
|
2053
|
+
// cout<<rhoxyz<<endl;
|
2054
|
+
|
2055
|
+
|
2056
|
+
return rhoxyz;
|
2057
|
+
}
|
2058
|
+
|
2059
|
+
|
2060
|
+
|
2061
|
+
|
2062
|
+
|
2063
|
+
|
2064
|
+
|
2065
|
+
float anisokernel_density(float xyz[ND],struct NODE *nodes1, int desngbA, struct pqueue* pqxA, struct linklist* pqStartA, bool *idoneA,bool *imarkA, int desngbB, struct pqueue* pqxB, struct linklist* pqStartB, bool *idoneB,bool *imarkB)
|
2066
|
+
{
|
2067
|
+
int n,k,l,nrot;
|
2068
|
+
double dx[ND],dxcm[ND],mtot=0.0,ht1,rcm;
|
2069
|
+
float rhoxyz;
|
2070
|
+
|
2071
|
+
for(k=0;k<ND;k++)
|
2072
|
+
dxcm[k]=0.0;
|
2073
|
+
|
2074
|
+
if(All.TypeOfSmoothing==2)
|
2075
|
+
{
|
2076
|
+
rhoxyz=ngb_treedensity_sphere_nometric(xyz,nodes1,desngbA,pqxA,pqStartA,idoneA,imarkA);
|
2077
|
+
for(k=0;k<ND;k++)
|
2078
|
+
metric1[k]=1.0;
|
2079
|
+
}
|
2080
|
+
if(All.TypeOfSmoothing==3)
|
2081
|
+
{
|
2082
|
+
rhoxyz=ngb_treedensity_sphere_metric(xyz,nodes1,desngbA,pqxA,pqStartA,idoneA,imarkA);
|
2083
|
+
for(k=0;k<ND;k++)
|
2084
|
+
metric1[k]=metric[k];
|
2085
|
+
}
|
2086
|
+
|
2087
|
+
|
2088
|
+
// for(k=0;k<ND;k++)
|
2089
|
+
// cout<<sqrt(pqHead->r)/metric[k]<<" "<<endl;
|
2090
|
+
|
2091
|
+
for(k=1;k<=ND;k++)
|
2092
|
+
for(l=1;l<=ND;l++)
|
2093
|
+
mrho[k][l]=0.0;
|
2094
|
+
|
2095
|
+
// Calculate the center of mass dxcm[k]
|
2096
|
+
for(n=0; n<desngbA; n++)
|
2097
|
+
{
|
2098
|
+
for(k=0;k<ND;k++)
|
2099
|
+
{
|
2100
|
+
#ifdef PERIODIC
|
2101
|
+
dx[k] = periodic((xyz[k] - pqStartA[n].x[k]),All.boxh[k]);
|
2102
|
+
#else
|
2103
|
+
dx[k] = xyz[k] - pqStartA[n].x[k];
|
2104
|
+
#endif
|
2105
|
+
|
2106
|
+
dxcm[k]+=dx[k]*Part[pqStartA[n].p].Mass;
|
2107
|
+
}
|
2108
|
+
mtot +=Part[pqStartA[n].p].Mass;
|
2109
|
+
}
|
2110
|
+
|
2111
|
+
for(k=0,rcm=0.0;k<ND;k++)
|
2112
|
+
{
|
2113
|
+
dxcm[k]=dxcm[k]/mtot;
|
2114
|
+
rcm+=dxcm[k]*dxcm[k];
|
2115
|
+
}
|
2116
|
+
rcm=sqrt(rcm);
|
2117
|
+
|
2118
|
+
|
2119
|
+
|
2120
|
+
|
2121
|
+
// Calculate the covariance matrix
|
2122
|
+
for(n=0; n<desngbA; n++)
|
2123
|
+
{
|
2124
|
+
for(k=0;k<ND;k++)
|
2125
|
+
{
|
2126
|
+
#ifdef PERIODIC
|
2127
|
+
dx[k] = periodic((xyz[k] - pqStartA[n].x[k]),All.boxh[k]);
|
2128
|
+
#else
|
2129
|
+
dx[k] = xyz[k] - pqStartA[n].x[k];
|
2130
|
+
#endif
|
2131
|
+
dx[k] =dx[k]-dxcm[k];
|
2132
|
+
}
|
2133
|
+
|
2134
|
+
for(k=1;k<=ND;k++)
|
2135
|
+
for(l=1;l<=ND;l++)
|
2136
|
+
{
|
2137
|
+
mrho[k][l]+=dx[k-1]*dx[l-1]*Part[pqStartA[n].p].Mass;
|
2138
|
+
}
|
2139
|
+
}
|
2140
|
+
|
2141
|
+
|
2142
|
+
for(k=1;k<=ND;k++)
|
2143
|
+
for(l=1;l<=ND;l++)
|
2144
|
+
{
|
2145
|
+
mrho[k][l]=mrho[k][l]*metric1[k-1]*metric1[l-1]/(mtot*sqrt(pqHead->r*pqHead->r));
|
2146
|
+
// cout<<k<<" "<<l<<" "<<mrho[k][l]<<endl;
|
2147
|
+
|
2148
|
+
}
|
2149
|
+
|
2150
|
+
|
2151
|
+
// Calculate the transoformation matrix "ve" of unit covariance and update scaling "d"
|
2152
|
+
jacobi(mrho,ND,d,ve,&nrot);
|
2153
|
+
|
2154
|
+
for(k=1;k<=ND;k++)
|
2155
|
+
{
|
2156
|
+
d[k]=fabs(sqrt(d[k]));
|
2157
|
+
}
|
2158
|
+
|
2159
|
+
|
2160
|
+
ht1=a_max(d,1,ND);
|
2161
|
+
for(k=1;k<=ND;k++)
|
2162
|
+
{
|
2163
|
+
d[k]=d[k]/ht1;
|
2164
|
+
}
|
2165
|
+
|
2166
|
+
|
2167
|
+
// for(k=1;k<=ND;k++)
|
2168
|
+
// for(l=1;l<=ND;l++)
|
2169
|
+
// cout<<k<<" "<<l<<" ve "<<ve[k][l]<<endl;
|
2170
|
+
|
2171
|
+
|
2172
|
+
|
2173
|
+
if(a_min(d,1,ND)<All.Anisotropy)
|
2174
|
+
{
|
2175
|
+
for(k=1;k<=ND;k++)
|
2176
|
+
{
|
2177
|
+
if(d[k]<All.Anisotropy)
|
2178
|
+
d[k]=All.Anisotropy;
|
2179
|
+
}
|
2180
|
+
for(k=1;k<=ND;k++)
|
2181
|
+
for(l=1;l<=ND;l++)
|
2182
|
+
{
|
2183
|
+
ve[k][l]=0.0;
|
2184
|
+
if(k==l) ve[k][l]=1.0;
|
2185
|
+
}
|
2186
|
+
}
|
2187
|
+
|
2188
|
+
|
2189
|
+
for(k=1;k<=ND;k++)
|
2190
|
+
for(l=1;l<=ND;l++)
|
2191
|
+
{
|
2192
|
+
gmatrix[k-1][l-1]=ve[k][l];
|
2193
|
+
// gmatrix[k-1][l-1]=0.0;
|
2194
|
+
// if(k==l)gmatrix[k-1][l-1]=1.0;
|
2195
|
+
}
|
2196
|
+
|
2197
|
+
for(k=1,ht1=1.0/d[1];k<=ND;k++)
|
2198
|
+
{
|
2199
|
+
metric[k-1]=1.0/d[k];
|
2200
|
+
if(ht1>metric[k-1])
|
2201
|
+
ht1=metric[k-1];
|
2202
|
+
}
|
2203
|
+
|
2204
|
+
for(k=0;k<ND;k++)
|
2205
|
+
{
|
2206
|
+
metric[k]=metric[k]/ht1;
|
2207
|
+
// metric[k]=1.0;
|
2208
|
+
// cout<<" a "<<1/metric[k]<<" "<<metric[k]<<endl;
|
2209
|
+
}
|
2210
|
+
|
2211
|
+
|
2212
|
+
|
2213
|
+
rhoxyz=ngb_treedensity_sphere_gmatrix(xyz,nodes1,desngbB,pqxB,pqStartB,idoneB,imarkB);
|
2214
|
+
|
2215
|
+
|
2216
|
+
|
2217
|
+
// cout<<rhoxyz<<endl;
|
2218
|
+
return rhoxyz;
|
2219
|
+
}
|
2220
|
+
|
2221
|
+
|
2222
|
+
void create_linklist(struct pqueue* &pqx,struct linklist* &pqStart,bool* &imark,bool* &idone,int desngb,int numpart)
|
2223
|
+
{
|
2224
|
+
int i;
|
2225
|
+
pqStart=new linklist[desngb];
|
2226
|
+
pqx=new pqueue[desngb];
|
2227
|
+
for(i=0;i<desngb;++i)
|
2228
|
+
pqx[i].pq=pqStart+i;
|
2229
|
+
imark= new bool[numpart];
|
2230
|
+
idone= new bool[numpart];
|
2231
|
+
for(i=0; i<numpart; i++)
|
2232
|
+
{idone[i]=0; }
|
2233
|
+
}
|
2234
|
+
|
2235
|
+
|
2236
|
+
|
2237
|
+
void initialize_linklist(struct linklist* pqStart,bool* imark,int iStart,int desngb,int numpart)
|
2238
|
+
{
|
2239
|
+
int k,ji;
|
2240
|
+
struct linklist *pq;
|
2241
|
+
for(k=0; k<numpart; k++)
|
2242
|
+
imark[k]=0;
|
2243
|
+
// for(j=0; j<parttype; j++)
|
2244
|
+
// i+=npart[j];
|
2245
|
+
|
2246
|
+
for(pq=pqStart,ji=iStart;pq<(pqStart+desngb);ji++,pq++)
|
2247
|
+
{
|
2248
|
+
// cout<<i<<" "<<ji<<" "<<nodes1<<" "<<trees[j]<<endl;
|
2249
|
+
pq->p=ji;
|
2250
|
+
for(k=0; k<ND; k++)
|
2251
|
+
pq->x[k]=Part[ji].Pos[k];
|
2252
|
+
imark[ji]=1;
|
2253
|
+
}
|
2254
|
+
|
2255
|
+
}
|
2256
|
+
|
2257
|
+
|
2258
|
+
float density_general(float xyz[ND],struct NODE *nodes1, int desngbA, struct pqueue* pqxA, struct linklist* pqStartA, bool *idoneA,bool *imarkA, int desngbB, struct pqueue* pqxB, struct linklist* pqStartB, bool *idoneB,bool *imarkB)
|
2259
|
+
{
|
2260
|
+
float Density=0;
|
2261
|
+
if(All.AnisotropicKernel==1)
|
2262
|
+
{
|
2263
|
+
Density= anisokernel_density(xyz, nodes1,desngbA,pqxA,pqStartA,idoneA,imarkA,desngbB,pqxB,pqStartB,idoneB,imarkB)/All.hsv;
|
2264
|
+
}
|
2265
|
+
else
|
2266
|
+
{
|
2267
|
+
switch (All.TypeOfSmoothing)
|
2268
|
+
{
|
2269
|
+
case 0:
|
2270
|
+
Density=ngb_treedensity_raw(xyz,nodes1)/All.hsv;
|
2271
|
+
break;
|
2272
|
+
case 1:
|
2273
|
+
Density=ngb_treedensity_fiestas(xyz,nodes1)/All.hsv;
|
2274
|
+
break;
|
2275
|
+
case 2:
|
2276
|
+
Density= ngb_treedensity_sphere_nometric(xyz, nodes1,desngbB,pqxB,pqStartB,idoneB,imarkB)/All.hsv;
|
2277
|
+
break;
|
2278
|
+
case 3:
|
2279
|
+
Density= ngb_treedensity_sphere_metric(xyz, nodes1,desngbB,pqxB,pqStartB,idoneB,imarkB)/All.hsv;
|
2280
|
+
break;
|
2281
|
+
case 4:
|
2282
|
+
Density= ngb_treedensity_box_metric(xyz, nodes1,desngbB,pqxB,pqStartB,idoneB,imarkB)/All.hsv;
|
2283
|
+
break;
|
2284
|
+
case 5:
|
2285
|
+
Density= ngb_treedensity_box_metric(xyz, nodes1,desngbB,pqxB,pqStartB,idoneB,imarkB)/All.hsv;
|
2286
|
+
break;
|
2287
|
+
default:
|
2288
|
+
cout<<"Usage: TypeOfSmoothing 0 to 6"<<endl;
|
2289
|
+
endrun(10);
|
2290
|
+
break;
|
2291
|
+
}
|
2292
|
+
}
|
2293
|
+
return Density;
|
2294
|
+
}
|
2295
|
+
|
2296
|
+
|
2297
|
+
|
2298
|
+
|
2299
|
+
void print_list(struct linklist *pq1,int size1)
|
2300
|
+
{
|
2301
|
+
struct linklist *pq;
|
2302
|
+
int i;
|
2303
|
+
cout<<" List "<<endl;
|
2304
|
+
pq=pq1;
|
2305
|
+
for(i=0;i<size1;i++)
|
2306
|
+
{
|
2307
|
+
cout<<i<<" "<<pq<<" "<<" "<<pq->r<<" "<<pq->p<<endl;
|
2308
|
+
if(i!=(size1-1))
|
2309
|
+
pq++;
|
2310
|
+
}
|
2311
|
+
cout<<" complete "<<endl;
|
2312
|
+
}
|
2313
|
+
|
2314
|
+
|
2315
|
+
|