emmet-builders 0.83.6__py3-none-any.whl → 0.83.6rc0__py3-none-any.whl
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- emmet/builders/vasp/materials.py +1 -32
- {emmet_builders-0.83.6.dist-info → emmet_builders-0.83.6rc0.dist-info}/METADATA +1 -1
- {emmet_builders-0.83.6.dist-info → emmet_builders-0.83.6rc0.dist-info}/RECORD +5 -5
- {emmet_builders-0.83.6.dist-info → emmet_builders-0.83.6rc0.dist-info}/WHEEL +0 -0
- {emmet_builders-0.83.6.dist-info → emmet_builders-0.83.6rc0.dist-info}/top_level.txt +0 -0
emmet/builders/vasp/materials.py
CHANGED
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@@ -6,14 +6,9 @@ from typing import Dict, Iterable, Iterator, List, Optional, Union
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from maggma.builders import Builder
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from maggma.stores import Store
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from maggma.utils import grouper
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from pymatgen.analysis.elasticity.strain import Deformation
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from pymatgen.core.structure import Structure
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from pymatgen.transformations.standard_transformations import (
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DeformStructureTransformation,
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)
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from emmet.builders.settings import EmmetBuildSettings
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from emmet.core.utils import group_structures, jsanitize
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from emmet.core.utils import group_structures, jsanitize, undeform_structure
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from emmet.core.vasp.calc_types import TaskType
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from emmet.core.vasp.material import MaterialsDoc
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from emmet.core.vasp.task_valid import TaskDocument
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@@ -343,29 +338,3 @@ class MaterialsBuilder(Builder):
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for group in grouped_structures:
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grouped_tasks = [filtered_tasks[struct.index] for struct in group] # type: ignore
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yield grouped_tasks
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def undeform_structure(structure: Structure, transformations: Dict) -> Structure:
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"""
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Get the undeformed structure by applying the transformations in a reverse order.
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Args:
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structure: deformed structure
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transformation: transformation that deforms the structure
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Returns:
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undeformed structure
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"""
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for transformation in reversed(transformations.get("history", [])):
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if transformation["@class"] == "DeformStructureTransformation":
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deform = Deformation(transformation["deformation"])
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dst = DeformStructureTransformation(deform.inv)
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structure = dst.apply_transformation(structure)
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else:
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raise RuntimeError(
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"Expect transformation to be `DeformStructureTransformation`; "
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f"got {transformation['@class']}"
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)
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return structure
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@@ -43,9 +43,9 @@ emmet/builders/molecules/vibration.py,sha256=9LNeKh8BHck-ooW4XzAZAFeio2u6bDwdsUV
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emmet/builders/qchem/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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emmet/builders/qchem/molecules.py,sha256=CZyVQzjfb-_gAS997BFbd9xkKwvwPWrquNH0Aoy6oY8,26217
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emmet/builders/vasp/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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emmet/builders/vasp/materials.py,sha256=
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emmet/builders/vasp/materials.py,sha256=WVNNvY47tn5iyIXiAwt6JFE1oITjZ5mVYUYRR2_cEcE,12561
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emmet/builders/vasp/task_validator.py,sha256=otj94MwCDRedE0FaSoeuxUrXdMB56TpSK4hDTL_I5g8,2927
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emmet_builders-0.83.
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emmet_builders-0.83.
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emmet_builders-0.83.
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emmet_builders-0.83.
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emmet_builders-0.83.6rc0.dist-info/METADATA,sha256=A0jGv7bTV8FFS7InZr86rllpr_u0AtjiiW0iSs4F92E,1995
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emmet_builders-0.83.6rc0.dist-info/WHEEL,sha256=GJ7t_kWBFywbagK5eo9IoUwLW6oyOeTKmQ-9iHFVNxQ,92
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emmet_builders-0.83.6rc0.dist-info/top_level.txt,sha256=6GcpbmWPeFhNCTfDFilb8GQ4T1UQu4z9c5jpobjwE-Q,6
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emmet_builders-0.83.6rc0.dist-info/RECORD,,
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File without changes
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File without changes
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