elspais 0.9.3__py3-none-any.whl → 0.11.1__py3-none-any.whl

elspais/trace_view/html/generator.py

@@ -0,0 +1,1006 @@
+"""
+HTML Generator for trace-view.
+
+This module contains all HTML, CSS, and JavaScript generation for the
+interactive traceability matrix report. It was extracted from the original
+generate_traceability.py as a monolithic module to support the trace_view
+package refactoring.
+
+Contains:
+- HTMLGenerator class with all HTML rendering methods
+- CSS styles for the interactive report
+- JavaScript for interactivity (expand/collapse, side panel, code viewer)
+- Modal dialogs (legend, file picker)
+- Edit mode functionality
+"""
+
+import json
+import re
+import sys
+from datetime import datetime
+from pathlib import Path
+from typing import Dict, List, Optional, Set
+
+from jinja2 import Environment, FileSystemLoader, select_autoescape
+
+from elspais.trace_view.models import TraceViewRequirement as Requirement
+from elspais.trace_view.coverage import count_by_level, find_orphaned_requirements, calculate_coverage, get_implementation_status
+
+
+class HTMLGenerator:
+    """Generates interactive HTML traceability matrix.
+
+    This class contains all the HTML, CSS, and JavaScript generation logic
+    for the trace-view interactive report.
+
+    Args:
+        requirements: Dict mapping requirement ID to Requirement object
+        base_path: Relative path from output file to repo root (for links)
+        mode: Report mode ('core', 'sponsor', 'combined')
+        sponsor: Sponsor name if in sponsor mode
+        version: Version number for display
+        repo_root: Repository root path for absolute links
+    """
+
+    def __init__(
+        self,
+        requirements: Dict[str, Requirement],
+        base_path: str = '',
+        mode: str = 'core',
+        sponsor: Optional[str] = None,
+        version: int = 16,
+        repo_root: Optional[Path] = None
+    ):
+        self.requirements = requirements
+        self._base_path = base_path
+        self.mode = mode
+        self.sponsor = sponsor
+        self.VERSION = version
+        self.repo_root = repo_root
+        # Instance tracking for flat list building
+        self._instance_counter = 0
+        self._visited_req_ids: Set[str] = set()
+
+        # Jinja2 template environment
+        template_dir = Path(__file__).parent / "templates"
+        self.env = Environment(
+            loader=FileSystemLoader(template_dir),
+            autoescape=select_autoescape(['html', 'xml']),
+            trim_blocks=True,
+            lstrip_blocks=True
+        )
+
+        # Register custom filters for templates
+        self.env.filters['status_class'] = lambda s: s.lower() if s else ''
+        self.env.filters['level_class'] = lambda s: s.lower() if s else ''
+
+    def generate(
+        self,
+        embed_content: bool = False,
+        edit_mode: bool = False,
+        review_mode: bool = False
+    ) -> str:
+        """Generate the complete HTML report using Jinja2 templates.
+
+        Args:
+            embed_content: If True, embed full requirement content as JSON
+            edit_mode: If True, include edit mode UI elements
+            review_mode: If True, include review mode UI and scripts
+
+        Returns:
+            Complete HTML document as string
+
+        Raises:
+            jinja2.TemplateError: If template rendering fails
+        """
+        context = self._build_render_context(embed_content, edit_mode, review_mode)
+        template = self.env.get_template('base.html')
+        return template.render(**context)
+
+    def _count_by_level(self) -> Dict[str, Dict[str, int]]:
+        """Count requirements by level, with and without deprecated."""
+        return count_by_level(self.requirements)
+
+    def _count_by_repo(self) -> Dict[str, Dict[str, int]]:
+        """Count requirements by repo prefix (CORE, CAL, TTN, etc.).
+
+        Returns:
+            Dict mapping repo prefix to {'active': count, 'all': count}
+            CORE is used for core repo requirements (no prefix).
+        """
+        repo_counts: Dict[str, Dict[str, int]] = {}
+
+        for req in self.requirements.values():
+            prefix = req.repo_prefix or 'CORE'  # Use CORE for core repo
+
+            if prefix not in repo_counts:
+                repo_counts[prefix] = {'active': 0, 'all': 0}
+
+            repo_counts[prefix]['all'] += 1
+            if req.status != 'Deprecated':
+                repo_counts[prefix]['active'] += 1
+
+        return repo_counts
+
+    def _count_impl_files(self) -> int:
+        """Count total implementation files across all requirements."""
+        return sum(len(req.implementation_files) for req in self.requirements.values())
+
+    def _find_orphaned_requirements(self) -> List[Requirement]:
+        """Find requirements with missing parents."""
+        return find_orphaned_requirements(self.requirements)
+
+    def _calculate_coverage(self, req_id: str) -> dict:
+        """Calculate coverage for a requirement."""
+        return calculate_coverage(self.requirements, req_id)
+
+    def _get_implementation_status(self, req_id: str) -> str:
+        """Get implementation status for a requirement."""
+        return get_implementation_status(self.requirements, req_id)
+
+    def _load_css(self) -> str:
+        """Load CSS content from external stylesheet.
+
+        Loads styles from templates/partials/styles.css for embedding
+        in the HTML output.
+
+        Returns:
+            CSS content as string, or empty string if file not found.
+        """
+        css_path = Path(__file__).parent / "templates" / "partials" / "styles.css"
+        if css_path.exists():
+            return css_path.read_text()
+        return ""
+
+    def _load_js(self) -> str:
+        """Load JavaScript content from external script file.
+
+        Loads scripts from templates/partials/scripts.js for embedding
+        in the HTML output.
+
+        Returns:
+            JavaScript content as string, or empty string if file not found.
+        """
+        js_path = Path(__file__).parent / "templates" / "partials" / "scripts.js"
+        if js_path.exists():
+            return js_path.read_text()
+        return ""
+
+    def _load_review_css(self) -> str:
+        """Load review system CSS.
+
+        Returns:
+            CSS content as string, or empty string if file not found.
+        """
+        css_path = Path(__file__).parent / "templates" / "partials" / "review-styles.css"
+        if css_path.exists():
+            return css_path.read_text()
+        return ""
+
+    def _load_review_js(self) -> str:
+        """Load review system JavaScript modules.
+
+        Concatenates all review JS modules in the correct dependency order.
+
+        Returns:
+            JavaScript content as string, or empty string if files not found.
+        """
+        review_dir = Path(__file__).parent / "templates" / "partials" / "review"
+        if not review_dir.exists():
+            return ""
+
+        # Load modules in dependency order (REQ-d00092)
+        module_order = [
+            "review-data.js",         # Data models and state (no deps)
+            "review-position.js",     # Position resolution (depends on data)
+            "review-line-numbers.js", # Line numbers for click-to-comment (depends on data)
+            "review-comments.js",     # Comments UI (depends on position, line-numbers)
+            "review-status.js",       # Status UI (depends on data)
+            "review-packages.js",     # Package management (depends on data)
+            "review-sync.js",         # Sync operations (depends on data)
+            "review-help.js",         # Help system (depends on data)
+            "review-resize.js",       # Panel resize (depends on DOM)
+            "review-init.js",         # Init orchestration (must be last)
+        ]
+
+        js_parts = []
+        for module_name in module_order:
+            module_path = review_dir / module_name
+            if module_path.exists():
+                js_parts.append(f"// === {module_name} ===")
+                js_parts.append(module_path.read_text())
+
+        return "\n".join(js_parts)
+
+    def _build_render_context(
+        self,
+        embed_content: bool = False,
+        edit_mode: bool = False,
+        review_mode: bool = False
+    ) -> dict:
+        """Build the template render context.
+
+        Creates a dictionary with all data needed by Jinja2 templates.
+
+        Args:
+            embed_content: If True, embed full requirement content
+            edit_mode: If True, include edit mode UI
+            review_mode: If True, include review mode UI and scripts
+
+        Returns:
+            Dictionary containing template context variables
+        """
+        by_level = self._count_by_level()
+        by_repo = self._count_by_repo()
+
+        # Collect topics
+        all_topics = set()
+        for req in self.requirements.values():
+            topic = req.file_path.stem.split('-', 1)[1] if '-' in req.file_path.stem else req.file_path.stem
+            all_topics.add(topic)
+        sorted_topics = sorted(all_topics)
+
+        # Build requirements HTML using existing method
+        requirements_html = self._generate_requirements_html(embed_content, edit_mode)
+
+        # Build JSON data for embedded mode
+        req_json_data = ""
+        if embed_content:
+            req_json_data = self._generate_req_json_data()
+
+        return {
+            # Configuration flags
+            'embed_content': embed_content,
+            'edit_mode': edit_mode,
+            'review_mode': review_mode,
+            'version': self.VERSION,
+
+            # Statistics
+            'stats': {
+                'prd': {
+                    'active': by_level['active']['PRD'],
+                    'all': by_level['all']['PRD']
+                },
+                'ops': {
+                    'active': by_level['active']['OPS'],
+                    'all': by_level['all']['OPS']
+                },
+                'dev': {
+                    'active': by_level['active']['DEV'],
+                    'all': by_level['all']['DEV']
+                },
+                'impl_files': self._count_impl_files()
+            },
+
+            # Repo prefix stats (for associated repos like CAL, TTN, etc.)
+            'repo_stats': by_repo,
+
+            # Requirements data
+            'topics': sorted_topics,
+            'requirements_html': requirements_html,
+            'req_json_data': req_json_data,
+
+            # Asset content (CSS/JS loaded from external files)
+            'css': self._load_css(),
+            'js': self._load_js(),
+
+            # Review mode assets (loaded conditionally)
+            'review_css': self._load_review_css() if review_mode else '',
+            'review_js': self._load_review_js() if review_mode else '',
+            'review_json_data': self._generate_review_json_data() if review_mode else '',
+
+            # Metadata
+            'timestamp': datetime.now().strftime('%Y-%m-%d %H:%M'),
+            'repo_root': str(self.repo_root) if self.repo_root else '',
+        }
+
+    def _generate_requirements_html(
+        self,
+        embed_content: bool = False,
+        edit_mode: bool = False
+    ) -> str:
+        """Generate the HTML for all requirements.
+
+        This extracts the requirement tree generation logic to be used
+        by both the legacy _generate_html() method and the template-based
+        rendering.
+
+        Args:
+            embed_content: If True, embed full requirement content
+            edit_mode: If True, include edit mode UI
+
+        Returns:
+            HTML string with all requirement rows
+        """
+        # Build flat list for rendering
+        flat_list = self._build_flat_requirement_list()
+
+        html_parts = []
+        for item_data in flat_list:
+            html_parts.append(
+                self._format_item_flat_html(
+                    item_data,
+                    embed_content=embed_content,
+                    edit_mode=edit_mode
+                )
+            )
+
+        return '\n'.join(html_parts)
+
+    def _generate_legend_html(self) -> str:
+        """Generate HTML legend section"""
+        return """
+        <div style="background: #f8f9fa; padding: 15px; border-radius: 4px; margin: 20px 0;">
+            <h2 style="margin-top: 0;">Legend</h2>
+            <div style="display: grid; grid-template-columns: 1fr 1fr 1fr; gap: 15px;">
+                <div>
+                    <h3 style="font-size: 13px; margin-bottom: 8px;">Requirement Status:</h3>
+                    <ul style="list-style: none; padding: 0; font-size: 12px;">
+                        <li style="margin: 4px 0;">✅ Active requirement</li>
+                        <li style="margin: 4px 0;">🚧 Draft requirement</li>
+                        <li style="margin: 4px 0;">⚠️ Deprecated requirement</li>
+                        <li style="margin: 4px 0;"><span style="color: #28a745; font-weight: bold;">+</span> NEW (in untracked file)</li>
+                        <li style="margin: 4px 0;"><span style="color: #fd7e14; font-weight: bold;">*</span> MODIFIED (content changed)</li>
+                        <li style="margin: 4px 0;">🗺️ Roadmap (spec/roadmap/) - hidden by default</li>
+                    </ul>
+                </div>
+                <div>
+                    <h3 style="font-size: 13px; margin-bottom: 8px;">Traceability:</h3>
+                    <ul style="list-style: none; padding: 0; font-size: 12px;">
+                        <li style="margin: 4px 0;">🔗 Has implementation file(s)</li>
+                        <li style="margin: 4px 0;">○ No implementation found</li>
+                    </ul>
+                </div>
+                <div>
+                    <h3 style="font-size: 13px; margin-bottom: 8px;">Implementation Coverage:</h3>
+                    <ul style="list-style: none; padding: 0; font-size: 12px;">
+                        <li style="margin: 4px 0;">● Full coverage</li>
+                        <li style="margin: 4px 0;">◐ Partial coverage</li>
+                        <li style="margin: 4px 0;">○ Unimplemented</li>
+                    </ul>
+                </div>
+            </div>
+            <div style="margin-top: 10px;">
+                <h3 style="font-size: 13px; margin-bottom: 8px;">Interactive Controls:</h3>
+                <ul style="list-style: none; padding: 0; font-size: 12px;">
+                    <li style="margin: 4px 0;">▼ Expandable (has child requirements)</li>
+                    <li style="margin: 4px 0;">▶ Collapsed (click to expand)</li>
+                </ul>
+            </div>
+        </div>
+"""
+
+    def _generate_req_json_data(self) -> str:
+        """Generate JSON data containing all requirement content for embedded mode"""
+        req_data = {}
+        for req_id, req in self.requirements.items():
+            # Use correct spec path for external vs core repo requirements
+            if req.external_spec_path:
+                # External repo: use file:// URL
+                file_path_url = f"file://{req.external_spec_path}"
+            else:
+                # Core repo: use relative path
+                spec_subpath = 'spec/roadmap' if req.is_roadmap else 'spec'
+                file_path_url = f"{self._base_path}{spec_subpath}/{req.file_path.name}"
+
+            req_data[req_id] = {
+                'title': req.title,
+                'status': req.status,
+                'level': req.level,
+                'body': req.body.strip(),
+                'rationale': req.rationale.strip(),
+                'file': req.display_filename,  # Shows CAL/filename.md for external repos
+                'filePath': file_path_url,
+                'line': req.line_number,
+                'implements': list(req.implements) if req.implements else [],
+                'isRoadmap': req.is_roadmap,
+                'isConflict': req.is_conflict,
+                'conflictWith': req.conflict_with if req.is_conflict else None,
+                'isCycle': req.is_cycle,
+                'cyclePath': req.cycle_path if req.is_cycle else None,
+                'isExternal': req.external_spec_path is not None,
+                'repoPrefix': req.repo_prefix  # e.g., 'CAL' for associated repos
+            }
+        json_str = json.dumps(req_data, indent=2)
+        # Escape </script> to prevent premature closing of the script tag
+        # This is safe because JSON strings already escape the backslash
+        json_str = json_str.replace('</script>', '<\\/script>')
+        return json_str
+
+    def _generate_review_json_data(self) -> str:
+        """Generate JSON data for review mode initialization.
+
+        Loads existing review data from .reviews/ directory and embeds it
+        in the HTML for immediate display. The API is still used for updates.
+        """
+        review_data = {
+            'threads': {},
+            'flags': {},
+            'requests': {},
+            'config': {
+                'approvalRules': {
+                    'Draft->Active': ['product_owner', 'tech_lead'],
+                    'Active->Deprecated': ['product_owner'],
+                    'Draft->Deprecated': ['product_owner']
+                },
+                'pushOnComment': True,
+                'autoFetchOnOpen': True
+            }
+        }
+
+        # Load existing review data from .reviews/ directory
+        if self.repo_root:
+            reviews_dir = self.repo_root / '.reviews' / 'reqs'
+            if reviews_dir.exists():
+                for req_dir in reviews_dir.iterdir():
+                    if req_dir.is_dir():
+                        req_id = req_dir.name
+                        # Load threads
+                        threads_file = req_dir / 'threads.json'
+                        if threads_file.exists():
+                            try:
+                                with open(threads_file, 'r') as f:
+                                    threads_data = json.load(f)
+                                    if 'threads' in threads_data:
+                                        review_data['threads'][req_id] = threads_data['threads']
+                            except (json.JSONDecodeError, IOError) as e:
+                                print(f"Warning: Could not load {threads_file}: {e}", file=sys.stderr)
+
+                        # Load flags
+                        flag_file = req_dir / 'flag.json'
+                        if flag_file.exists():
+                            try:
+                                with open(flag_file, 'r') as f:
+                                    flag_data = json.load(f)
+                                    review_data['flags'][req_id] = flag_data
+                            except (json.JSONDecodeError, IOError) as e:
+                                print(f"Warning: Could not load {flag_file}: {e}", file=sys.stderr)
+
+                        # Load status requests
+                        status_file = req_dir / 'status.json'
+                        if status_file.exists():
+                            try:
+                                with open(status_file, 'r') as f:
+                                    status_data = json.load(f)
+                                    if 'requests' in status_data:
+                                        review_data['requests'][req_id] = status_data['requests']
+                            except (json.JSONDecodeError, IOError) as e:
+                                print(f"Warning: Could not load {status_file}: {e}", file=sys.stderr)
+
+        json_str = json.dumps(review_data, indent=2)
+        json_str = json_str.replace('</script>', '<\\/script>')
+        return json_str
+
+    def _build_flat_requirement_list(self) -> List[dict]:
+        """Build a flat list of requirements with hierarchy information"""
+        flat_list = []
+        self._instance_counter = 0  # Track unique instance IDs
+        self._visited_req_ids = set()  # Track visited requirements to avoid cycles and duplicates
+
+        # Start with all root requirements (those with no implements/parent)
+        # Root requirements can be PRD, OPS, or DEV - any req that doesn't implement another
+        root_reqs = [req for req in self.requirements.values() if not req.implements]
+        root_reqs.sort(key=lambda r: r.id)
+
+        for root_req in root_reqs:
+            self._add_requirement_and_children(root_req, flat_list, indent=0, parent_instance_id='', ancestor_path=[])
+
+        # Add any orphaned requirements that weren't included in the tree
+        # (requirements that have implements pointing to non-existent parents)
+        all_req_ids = set(self.requirements.keys())
+        included_req_ids = self._visited_req_ids
+        orphaned_ids = all_req_ids - included_req_ids
+
+        if orphaned_ids:
+            orphaned_reqs = [self.requirements[rid] for rid in orphaned_ids]
+            orphaned_reqs.sort(key=lambda r: r.id)
+            for orphan in orphaned_reqs:
+                self._add_requirement_and_children(orphan, flat_list, indent=0, parent_instance_id='', ancestor_path=[], is_orphan=True)
+
+        return flat_list
+
+    def _add_requirement_and_children(self, req: Requirement, flat_list: List[dict], indent: int, parent_instance_id: str, ancestor_path: list[str], is_orphan: bool = False):
+        """Recursively add requirement and its children to flat list
+
+        Args:
+            req: The requirement to add
+            flat_list: List to append items to
+            indent: Current indentation level
+            parent_instance_id: Instance ID of parent item
+            ancestor_path: List of requirement IDs in current traversal path (for cycle detection)
+            is_orphan: Whether this requirement is an orphan (has missing parent)
+        """
+        # Cycle detection: check if this requirement is already in our traversal path
+        if req.id in ancestor_path:
+            cycle_path = ancestor_path + [req.id]
+            cycle_str = " -> ".join([f"REQ-{rid}" for rid in cycle_path])
+            print(f"⚠️  CYCLE DETECTED in flat list build: {cycle_str}", file=sys.stderr)
+            return  # Don't add cyclic requirement again
+
+        # Track that we've visited this requirement
+        self._visited_req_ids.add(req.id)
+
+        # Generate unique instance ID for this occurrence
+        instance_id = f"inst_{self._instance_counter}"
+        self._instance_counter += 1
+
+        # Find child requirements
+        children = [
+            r for r in self.requirements.values()
+            if req.id in r.implements
+        ]
+        children.sort(key=lambda r: r.id)
+
+        # Check if this requirement has children (either child reqs or implementation files)
+        has_children = len(children) > 0 or len(req.implementation_files) > 0
+
+        # Add this requirement
+        flat_list.append({
+            'req': req,
+            'indent': indent,
+            'instance_id': instance_id,
+            'parent_instance_id': parent_instance_id,
+            'has_children': has_children,
+            'item_type': 'requirement'
+        })
+
+        # Add implementation files as child items
+        for file_path, line_num in req.implementation_files:
+            impl_instance_id = f"inst_{self._instance_counter}"
+            self._instance_counter += 1
+            flat_list.append({
+                'file_path': file_path,
+                'line_num': line_num,
+                'indent': indent + 1,
+                'instance_id': impl_instance_id,
+                'parent_instance_id': instance_id,
+                'has_children': False,
+                'item_type': 'implementation'
+            })
+
+        # Recursively add child requirements (with updated ancestor path for cycle detection)
+        current_path = ancestor_path + [req.id]
+        for child in children:
+            self._add_requirement_and_children(child, flat_list, indent + 1, instance_id, current_path)
+
+    def _format_item_flat_html(self, item_data: dict, embed_content: bool = False, edit_mode: bool = False) -> str:
+        """Format a single item (requirement or implementation file) as flat HTML row
+
+        Args:
+            item_data: Dictionary containing item data
+            embed_content: If True, use onclick handlers instead of href links for portability
+            edit_mode: If True, include edit mode UI elements
+        """
+        item_type = item_data.get('item_type', 'requirement')
+
+        if item_type == 'implementation':
+            return self._format_impl_file_html(item_data, embed_content, edit_mode)
+        else:
+            return self._format_req_html(item_data, embed_content, edit_mode)
+
+    def _format_impl_file_html(self, item_data: dict, embed_content: bool = False, edit_mode: bool = False) -> str:
+        """Format an implementation file as a child row"""
+        file_path = item_data['file_path']
+        line_num = item_data['line_num']
+        indent = item_data['indent']
+        instance_id = item_data['instance_id']
+        parent_instance_id = item_data['parent_instance_id']
+
+        # Create link or onclick handler
+        if embed_content:
+            file_url = f"{self._base_path}{file_path}"
+            file_link = f'<a href="#" onclick="openCodeViewer(\'{file_url}\', {line_num}); return false;" style="color: #0066cc;">{file_path}:{line_num}</a>'
+        else:
+            link = f"{self._base_path}{file_path}#L{line_num}"
+            file_link = f'<a href="{link}" style="color: #0066cc;">{file_path}:{line_num}</a>'
+
+        # Add VS Code link for opening in editor (always uses vscode:// protocol)
+        # Note: VS Code links only work on the machine where this file was generated
+        abs_file_path = self.repo_root / file_path
+        vscode_url = f"vscode://file/{abs_file_path}:{line_num}"
+        vscode_link = f'<a href="{vscode_url}" title="Open in VS Code" class="vscode-link">🔧</a>'
+        file_link = f'{file_link}{vscode_link}'
+
+        # Edit mode destination column (only if edit mode enabled)
+        edit_column = '<div class="req-destination edit-mode-column"></div>' if edit_mode else ''
+
+        # Build HTML for implementation file row
+        html = f"""
+        <div class="req-item impl-file" data-instance-id="{instance_id}" data-indent="{indent}" data-parent-instance-id="{parent_instance_id}">
+            <div class="req-header-container">
+                <span class="collapse-icon"></span>
+                <div class="req-content">
+                    <div class="req-id" style="color: #6c757d;">📄</div>
+                    <div class="req-header" style="font-family: 'Consolas', 'Monaco', monospace; font-size: 12px;">{file_link}</div>
+                    <div class="req-level"></div>
+                    <div class="req-badges"></div>
+                    <div class="req-coverage"></div>
+                    <div class="req-status"></div>
+                    <div class="req-location"></div>
+                    {edit_column}
+                </div>
+            </div>
+        </div>
+"""
+        return html
+
+    def _format_req_html(self, req_data: dict, embed_content: bool = False, edit_mode: bool = False) -> str:
+        """Format a single requirement as flat HTML row
+
+        Args:
+            req_data: Dictionary containing requirement data
+            embed_content: If True, use onclick handlers instead of href links for portability
+            edit_mode: If True, include edit mode UI elements
+        """
+        req = req_data['req']
+        indent = req_data['indent']
+        instance_id = req_data['instance_id']
+        parent_instance_id = req_data['parent_instance_id']
+        has_children = req_data['has_children']
+
+        status_class = req.status.lower()
+        level_class = req.level.lower()
+
+        # Only show collapse icon if there are children
+        collapse_icon = '▼' if has_children else ''
+
+        # Determine implementation coverage status
+        impl_status = self._get_implementation_status(req.id)
+        if impl_status == 'Full':
+            coverage_icon = '●'  # Filled circle
+            coverage_title = 'Full implementation coverage'
+        elif impl_status == 'Partial':
+            coverage_icon = '◐'  # Half-filled circle
+            coverage_title = 'Partial implementation coverage'
+        else:  # Unimplemented
+            coverage_icon = '○'  # Empty circle
+            coverage_title = 'Unimplemented'
+
+        # Determine test status
+        test_badge = ''
+        if req.test_info:
+            test_status = req.test_info.test_status
+            test_count = req.test_info.test_count + req.test_info.manual_test_count
+
+            if test_status == 'passed':
+                test_badge = f'<span class="test-badge test-passed" title="{test_count} tests passed">✅ {test_count}</span>'
+            elif test_status == 'failed':
+                test_badge = f'<span class="test-badge test-failed" title="{test_count} tests, some failed">❌ {test_count}</span>'
+            elif test_status == 'not_tested':
+                test_badge = '<span class="test-badge test-not-tested" title="No tests implemented">⚡</span>'
+        else:
+            test_badge = '<span class="test-badge test-not-tested" title="No tests implemented">⚡</span>'
+
+        # Extract topic from filename
+        topic = req.file_path.stem.split('-', 1)[1] if '-' in req.file_path.stem else req.file_path.stem
+
+        # Create link to source file with REQ anchor
+        # In embedded mode, use onclick to open side panel instead of navigating away
+        # event.stopPropagation() prevents the parent toggle handler from firing
+        # Display ID without "REQ-" prefix for cleaner tree view
+        # Determine the correct spec path (spec/ or spec/roadmap/, or file:// for external)
+        if req.external_spec_path:
+            # External repo: use file:// URL
+            spec_url = f'file://{req.external_spec_path}'
+        else:
+            # Core repo: use relative path
+            spec_subpath = 'spec/roadmap' if req.is_roadmap else 'spec'
+            spec_url = f'{self._base_path}{spec_subpath}/{req.file_path.name}'
+
+        # Display filename without .md extension but with repo prefix (e.g., CAL/dev-edc-schema)
+        file_stem = req.file_path.stem  # removes .md extension
+        display_filename = f"{req.repo_prefix}/{file_stem}" if req.repo_prefix else file_stem
+
+        # Display ID: strip __conflict suffix (warning icon shows conflict status separately)
+        display_id = req.id
+        if '__conflict' in req.id:
+            display_id = req.id.replace('__conflict', '')
+
+        if embed_content:
+            req_link = f'<a href="#" onclick="event.stopPropagation(); openReqPanel(\'{req.id}\'); return false;" style="color: inherit; text-decoration: none; cursor: pointer;">{display_id}</a>'
+            file_line_link = f'<span style="color: inherit;">{display_filename}</span>'
+        else:
+            req_link = f'<a href="{spec_url}#REQ-{req.id}" style="color: inherit; text-decoration: none;">{display_id}</a>'
+            file_line_link = f'<a href="{spec_url}#L{req.line_number}" style="color: inherit; text-decoration: none;">{display_filename}</a>'
+
+        # Determine status indicators using distinctive Unicode symbols
+        # ★ (star) = NEW, ◆ (diamond) = MODIFIED, ↝ (wave arrow) = MOVED
+        status_suffix = ''
+        status_suffix_class = ''
+        status_title = ''
+
+        is_moved = req.is_moved
+        is_new_not_moved = req.is_new and not is_moved
+        is_modified = req.is_modified
+
+        if is_moved and is_modified:
+            # Moved AND modified - show both indicators
+            status_suffix = '↝◆'
+            status_suffix_class = 'status-moved-modified'
+            status_title = 'MOVED and MODIFIED'
+        elif is_moved:
+            # Just moved (might be in new file)
+            status_suffix = '↝'
+            status_suffix_class = 'status-moved'
+            status_title = 'MOVED from another file'
+        elif is_new_not_moved:
+            # Truly new (in new file, not moved)
+            status_suffix = '★'
+            status_suffix_class = 'status-new'
+            status_title = 'NEW requirement'
+        elif is_modified:
+            # Modified in place
+            status_suffix = '◆'
+            status_suffix_class = 'status-modified'
+            status_title = 'MODIFIED content'
+
+        # VS Code link for use in side panel (not in topic column)
+        if req.external_spec_path:
+            # External repo: use the absolute path directly
+            abs_spec_path = req.external_spec_path
+        else:
+            # Core repo: construct from repo_root
+            spec_subpath_for_vscode = 'spec/roadmap' if req.is_roadmap else 'spec'
+            abs_spec_path = self.repo_root / spec_subpath_for_vscode / req.file_path.name
+        vscode_url = f"vscode://file/{abs_spec_path}:{req.line_number}"
+
+        # Check if this is a root requirement (no parents)
+        is_root = not req.implements or len(req.implements) == 0
+        is_root_attr = 'data-is-root="true"' if is_root else 'data-is-root="false"'
+        # Two separate modified attributes: uncommitted (since last commit) and branch (vs main)
+        uncommitted_attr = 'data-uncommitted="true"' if req.is_uncommitted else 'data-uncommitted="false"'
+        branch_attr = 'data-branch-changed="true"' if req.is_branch_changed else 'data-branch-changed="false"'
+
+        # Data attribute for has-children (for leaf-only filtering)
+        has_children_attr = 'data-has-children="true"' if has_children else 'data-has-children="false"'
+
+        # Data attribute for test status (for test filter)
+        test_status_value = 'not-tested'
+        if req.test_info:
+            if req.test_info.test_status == 'passed':
+                test_status_value = 'tested'
+            elif req.test_info.test_status == 'failed':
+                test_status_value = 'failed'
+        test_status_attr = f'data-test-status="{test_status_value}"'
+
+        # Data attribute for coverage (for coverage filter)
+        coverage_value = 'none'
+        if impl_status == 'Full':
+            coverage_value = 'full'
+        elif impl_status == 'Partial':
+            coverage_value = 'partial'
+        coverage_attr = f'data-coverage="{coverage_value}"'
+
+        # Data attribute for roadmap (for roadmap filtering)
+        roadmap_attr = 'data-roadmap="true"' if req.is_roadmap else 'data-roadmap="false"'
+
+        # Edit mode buttons - only generated if edit_mode is enabled
+        if edit_mode:
+            if req.is_roadmap:
+                edit_buttons = f'''<span class="edit-actions" onclick="event.stopPropagation();">
+                    <button class="edit-btn from-roadmap" onclick="addPendingMove('{req.id}', '{req.file_path.name}', 'from-roadmap')" title="Move out of roadmap">↩ From Roadmap</button>
+                    <button class="edit-btn move-file" onclick="showMoveToFile('{req.id}', '{req.file_path.name}')" title="Move to different file">📁 Move</button>
+                </span>'''
+            else:
+                edit_buttons = f'''<span class="edit-actions" onclick="event.stopPropagation();">
+                    <button class="edit-btn to-roadmap" onclick="addPendingMove('{req.id}', '{req.file_path.name}', 'to-roadmap')" title="Move to roadmap">🗺️ To Roadmap</button>
+                    <button class="edit-btn move-file" onclick="showMoveToFile('{req.id}', '{req.file_path.name}')" title="Move to different file">📁 Move</button>
+                </span>'''
+        else:
+            edit_buttons = ''
+
+        # Roadmap indicator icon (shown after REQ ID)
+        roadmap_icon = '<span class="roadmap-icon" title="In roadmap">🛤️</span>' if req.is_roadmap else ''
+
+        # Conflict indicator icon (shown for roadmap REQs that conflict with existing REQs)
+        conflict_icon = f'<span class="conflict-icon" title="Conflicts with REQ-{req.conflict_with}">⚠️</span>' if req.is_conflict else ''
+        conflict_attr = f'data-conflict="true" data-conflict-with="{req.conflict_with}"' if req.is_conflict else 'data-conflict="false"'
+
+        # Cycle indicator icon (shown for REQs involved in dependency cycles)
+        cycle_icon = f'<span class="cycle-icon" title="Cycle: {req.cycle_path}">🔄</span>' if req.is_cycle else ''
+        cycle_attr = f'data-cycle="true" data-cycle-path="{req.cycle_path}"' if req.is_cycle else 'data-cycle="false"'
+
+        # Determine item class based on status
+        item_class = 'conflict-item' if req.is_conflict else ('cycle-item' if req.is_cycle else '')
+
+        # Repo prefix for filtering (CORE for core repo, CAL/TTN/etc. for associated repos)
+        repo_prefix = req.repo_prefix or 'CORE'
+
+        # Build HTML for single flat row with unique instance ID
+        html = f"""
+        <div class="req-item {level_class} {status_class if req.status == 'Deprecated' else ''} {item_class}" data-req-id="{req.id}" data-instance-id="{instance_id}" data-level="{req.level}" data-indent="{indent}" data-parent-instance-id="{parent_instance_id}" data-topic="{topic}" data-status="{req.status}" data-title="{req.title.lower()}" data-file="{req.file_path.name}" data-repo="{repo_prefix}" {is_root_attr} {uncommitted_attr} {branch_attr} {has_children_attr} {test_status_attr} {coverage_attr} {roadmap_attr} {conflict_attr} {cycle_attr}>
+            <div class="req-header-container" onclick="toggleRequirement(this)">
+                <span class="collapse-icon">{collapse_icon}</span>
+                <div class="req-content">
+                    <div class="req-id">{conflict_icon}{cycle_icon}{req_link}{roadmap_icon}</div>
+                    <div class="req-header">{req.title}</div>
+                    <div class="req-level">{req.level}</div>
+                    <div class="req-badges">
+                        <span class="status-badge status-{status_class}">{req.status}</span><span class="status-suffix {status_suffix_class}" title="{status_title}">{status_suffix}</span>
+                    </div>
+                    <div class="req-coverage" title="{coverage_title}">{coverage_icon}</div>
+                    <div class="req-status">{test_badge}</div>
+                    <div class="req-location">{file_line_link}</div>
+                    {'<div class="req-destination edit-mode-column" data-req-id="' + req.id + '">' + edit_buttons + '<span class="dest-text"></span></div>' if edit_mode else ''}
+                </div>
+            </div>
+        </div>
+"""
+        return html
+
+    def _format_req_tree_html(self, req: Requirement, ancestor_path: list[str] | None = None) -> str:
+        """Format requirement and children as HTML tree (legacy non-collapsible).
+
+        Args:
+            req: The requirement to format
+            ancestor_path: List of requirement IDs in the current traversal path (for cycle detection)
+
+        Returns:
+            Formatted HTML string
+        """
+        if ancestor_path is None:
+            ancestor_path = []
+
+        # Cycle detection: check if this requirement is already in our traversal path
+        if req.id in ancestor_path:
+            cycle_path = ancestor_path + [req.id]
+            cycle_str = " -> ".join([f"REQ-{rid}" for rid in cycle_path])
+            print(f"⚠️  CYCLE DETECTED: {cycle_str}", file=sys.stderr)
+            return f'        <div class="req-item cycle-detected"><strong>⚠️ CYCLE DETECTED:</strong> REQ-{req.id} (path: {cycle_str})</div>\n'
+
+        # Safety depth limit
+        MAX_DEPTH = 50
+        if len(ancestor_path) > MAX_DEPTH:
+            print(f"⚠️  MAX DEPTH ({MAX_DEPTH}) exceeded at REQ-{req.id}", file=sys.stderr)
+            return f'        <div class="req-item depth-exceeded"><strong>⚠️ MAX DEPTH EXCEEDED:</strong> REQ-{req.id}</div>\n'
+
+        status_class = req.status.lower()
+        level_class = req.level.lower()
+
+        html = f"""
+        <div class="req-item {level_class} {status_class if req.status == 'Deprecated' else ''}">
+            <div class="req-header">
+                {req.id}: {req.title}
+            </div>
+            <div class="req-meta">
+                <span class="status-badge status-{status_class}">{req.status}</span>
+                Level: {req.level} |
+                File: {req.display_filename}:{req.line_number}
+            </div>
+"""
+
+        # Find children
+        children = [
+            r for r in self.requirements.values()
+            if req.id in r.implements
+        ]
+        children.sort(key=lambda r: r.id)
+
+        if children:
+            # Add current req to path before recursing into children
+            current_path = ancestor_path + [req.id]
+            html += '            <div class="child-reqs">\n'
+            for child in children:
+                html += self._format_req_tree_html(child, current_path)
+            html += '            </div>\n'
+
+        html += '        </div>\n'
+        return html
+
+    def _format_req_tree_html_collapsible(self, req: Requirement, ancestor_path: list[str] | None = None) -> str:
+        """Format requirement and children as collapsible HTML tree.
+
+        Args:
+            req: The requirement to format
+            ancestor_path: List of requirement IDs in the current traversal path (for cycle detection)
+
+        Returns:
+            Formatted HTML string
+        """
+        if ancestor_path is None:
+            ancestor_path = []
+
+        # Cycle detection: check if this requirement is already in our traversal path
+        if req.id in ancestor_path:
+            cycle_path = ancestor_path + [req.id]
+            cycle_str = " -> ".join([f"REQ-{rid}" for rid in cycle_path])
+            print(f"⚠️  CYCLE DETECTED: {cycle_str}", file=sys.stderr)
+            return f'''
+        <div class="req-item cycle-detected" data-req-id="{req.id}">
+            <div class="req-header-container">
+                <span class="collapse-icon"></span>
+                <div class="req-content">
+                    <div class="req-id">⚠️ CYCLE</div>
+                    <div class="req-header">Circular dependency detected at REQ-{req.id}</div>
+                    <div class="req-level">ERROR</div>
+                    <div class="req-badges">
+                        <span class="status-badge status-deprecated">Cycle</span>
+                    </div>
+                    <div class="req-location">Path: {cycle_str}</div>
+                </div>
+            </div>
+        </div>
+'''
+
+        # Safety depth limit
+        MAX_DEPTH = 50
+        if len(ancestor_path) > MAX_DEPTH:
+            print(f"⚠️  MAX DEPTH ({MAX_DEPTH}) exceeded at REQ-{req.id}", file=sys.stderr)
+            return f'''
+        <div class="req-item depth-exceeded" data-req-id="{req.id}">
+            <div class="req-header-container">
+                <span class="collapse-icon"></span>
+                <div class="req-content">
+                    <div class="req-id">⚠️ DEPTH</div>
+                    <div class="req-header">Maximum depth exceeded at REQ-{req.id}</div>
+                    <div class="req-level">ERROR</div>
+                    <div class="req-badges">
+                        <span class="status-badge status-deprecated">Overflow</span>
+                    </div>
+                </div>
+            </div>
+        </div>
+'''
+
+        status_class = req.status.lower()
+        level_class = req.level.lower()
+
+        # Find children
+        children = [
+            r for r in self.requirements.values()
+            if req.id in r.implements
+        ]
+        children.sort(key=lambda r: r.id)
+
+        # Only show collapse icon if there are children
+        collapse_icon = '▼' if children else ''
+
+        # Determine test status
+        test_badge = ''
+        if req.test_info:
+            test_status = req.test_info.test_status
+            test_count = req.test_info.test_count + req.test_info.manual_test_count
+
+            if test_status == 'passed':
+                test_badge = f'<span class="test-badge test-passed" title="{test_count} tests passed">✅ {test_count}</span>'
+            elif test_status == 'failed':
+                test_badge = f'<span class="test-badge test-failed" title="{test_count} tests, some failed">❌ {test_count}</span>'
+            elif test_status == 'not_tested':
+                test_badge = '<span class="test-badge test-not-tested" title="No tests implemented">⚡</span>'
+        else:
+            test_badge = '<span class="test-badge test-not-tested" title="No tests implemented">⚡</span>'
+
+        # Extract topic from filename (e.g., prd-security.md -> security)
+        topic = req.file_path.stem.split('-', 1)[1] if '-' in req.file_path.stem else req.file_path.stem
+
+        # Repo prefix for filtering (CORE for core repo, CAL/TTN/etc. for associated repos)
+        repo_prefix = req.repo_prefix or 'CORE'
+
+        html = f"""
+        <div class="req-item {level_class} {status_class if req.status == 'Deprecated' else ''}" data-req-id="{req.id}" data-level="{req.level}" data-topic="{topic}" data-status="{req.status}" data-title="{req.title.lower()}" data-repo="{repo_prefix}">
+            <div class="req-header-container" onclick="toggleRequirement(this)">
+                <span class="collapse-icon">{collapse_icon}</span>
+                <div class="req-content">
+                    <div class="req-id">REQ-{req.id}</div>
+                    <div class="req-header">{req.title}</div>
+                    <div class="req-level">{req.level}</div>
+                    <div class="req-badges">
+                        <span class="status-badge status-{status_class}">{req.status}</span>
+                    </div>
+                    <div class="req-status">{test_badge}</div>
+                    <div class="req-location">{req.display_filename}:{req.line_number}</div>
+                </div>
+            </div>
+"""
+
+        if children:
+            # Add current req to path before recursing into children
+            current_path = ancestor_path + [req.id]
+            html += '            <div class="child-reqs">\n'
+            for child in children:
+                html += self._format_req_tree_html_collapsible(child, current_path)
+            html += '            </div>\n'
+
+        html += '        </div>\n'
+        return html
+