eegdash 0.3.9.dev114__py3-none-any.whl → 0.3.9.dev129__py3-none-any.whl
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- eegdash/__init__.py +1 -1
- eegdash/api.py +58 -141
- eegdash/bids_eeg_metadata.py +149 -27
- eegdash/data_utils.py +63 -254
- eegdash/dataset/dataset.py +27 -21
- eegdash/downloader.py +176 -0
- eegdash/features/datasets.py +4 -3
- eegdash/hbn/preprocessing.py +1 -3
- eegdash/hbn/windows.py +0 -2
- eegdash/logging.py +23 -0
- {eegdash-0.3.9.dev114.dist-info → eegdash-0.3.9.dev129.dist-info}/METADATA +3 -2
- {eegdash-0.3.9.dev114.dist-info → eegdash-0.3.9.dev129.dist-info}/RECORD +15 -13
- {eegdash-0.3.9.dev114.dist-info → eegdash-0.3.9.dev129.dist-info}/WHEEL +0 -0
- {eegdash-0.3.9.dev114.dist-info → eegdash-0.3.9.dev129.dist-info}/licenses/LICENSE +0 -0
- {eegdash-0.3.9.dev114.dist-info → eegdash-0.3.9.dev129.dist-info}/top_level.txt +0 -0
eegdash/features/datasets.py
CHANGED
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@@ -3,7 +3,6 @@ from __future__ import annotations
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import json
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import os
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import shutil
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import warnings
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from collections.abc import Callable
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from typing import Dict, List
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@@ -17,6 +16,8 @@ from braindecode.datasets.base import (
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_create_description,
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)
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from ..logging import logger
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class FeaturesDataset(EEGWindowsDataset):
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"""Returns samples from a pandas DataFrame object along with a target.
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@@ -283,7 +284,7 @@ class FeaturesConcatDataset(BaseConcatDataset):
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# the following will be True for all datasets preprocessed and
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# stored in parallel with braindecode.preprocessing.preprocess
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if i_ds + 1 + offset < n_sub_dirs:
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logger.warning(
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f"The number of saved datasets ({i_ds + 1 + offset}) "
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f"does not match the number of existing "
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f"subdirectories ({n_sub_dirs}). You may now "
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@@ -294,7 +295,7 @@ class FeaturesConcatDataset(BaseConcatDataset):
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# if path contains files or directories that were not touched, raise
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# warning
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if path_contents:
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logger.warning(
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f"Chosen directory {path} contains other "
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f"subdirectories or files {path_contents}."
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)
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eegdash/hbn/preprocessing.py
CHANGED
eegdash/hbn/windows.py
CHANGED
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@@ -7,8 +7,6 @@ from mne_bids import get_bids_path_from_fname
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from braindecode.datasets.base import BaseConcatDataset
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logger = logging.getLogger("eegdash")
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def build_trial_table(events_df: pd.DataFrame) -> pd.DataFrame:
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"""One row per contrast trial with stimulus/response metrics."""
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eegdash/logging.py
ADDED
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import logging
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from rich.logging import RichHandler
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# Get the root logger
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root_logger = logging.getLogger()
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# --- This is the key part ---
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# 1. Remove any handlers that may have been added by default
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root_logger.handlers = []
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# 2. Add your RichHandler
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root_logger.addHandler(RichHandler(rich_tracebacks=True, markup=True))
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# ---------------------------
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# 3. Set the level for the root logger
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root_logger.setLevel(logging.INFO)
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# Now, get your package-specific logger. It will inherit the
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# configuration from the root logger we just set up.
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logger = logging.getLogger("eegdash")
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logger.setLevel(logging.INFO)
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@@ -1,6 +1,6 @@
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Metadata-Version: 2.4
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Name: eegdash
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Version: 0.3.9.
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Version: 0.3.9.dev129
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Summary: EEG data for machine learning
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Author-email: Young Truong <dt.young112@gmail.com>, Arnaud Delorme <adelorme@gmail.com>, Aviv Dotan <avivd220@gmail.com>, Oren Shriki <oren70@gmail.com>, Bruno Aristimunha <b.aristimunha@gmail.com>
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License-Expression: GPL-3.0-only
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Description-Content-Type: text/markdown
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License-File: LICENSE
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Requires-Dist: braindecode>=1.0
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Requires-Dist: mne_bids>=0.
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Requires-Dist: mne_bids>=0.17.0
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Requires-Dist: numba
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Requires-Dist: numpy
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Requires-Dist: pandas
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Requires-Dist: eeglabio
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Requires-Dist: tabulate
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Requires-Dist: docstring_inheritance
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Requires-Dist: rich
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Provides-Extra: tests
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Requires-Dist: pytest; extra == "tests"
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Requires-Dist: pytest-cov; extra == "tests"
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eegdash/__init__.py,sha256=
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eegdash/api.py,sha256=
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eegdash/bids_eeg_metadata.py,sha256=
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eegdash/__init__.py,sha256=WLMYpZuTIJ5DnzhwE40o4aqt8iwVpxdmOn9ezY7hw60,284
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eegdash/api.py,sha256=Eh-CxLOhDthmVeAubezXPu0eSOhRuYBN23iGIV75EVM,37675
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eegdash/bids_eeg_metadata.py,sha256=XUkQp2M8zQ_wH5JC8lQiVR0TWssOjSdrdEWkgwGjiZ8,13699
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eegdash/const.py,sha256=qdFBEL9kIrsj9CdxbXhBkR61R3CrTGSaj5Iq0YOACIs,7313
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eegdash/data_utils.py,sha256=
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eegdash/data_utils.py,sha256=dePEXcJefo3gmD534bb576p8v9jErDNLDHQoDGHqH-g,26006
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eegdash/downloader.py,sha256=B-8u0c39F4inV-v_WgYZrUKAGPQOdfqC2RX1qNrRQYM,5808
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eegdash/logging.py,sha256=SZdB7WLT5b2okecWpvLx4UWUxg3DiA11Z5d9lhYdDyc,616
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eegdash/mongodb.py,sha256=GD3WgA253oFgpzOHrYaj4P1mRjNtDMT5Oj4kVvHswjI,2006
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eegdash/paths.py,sha256=246xkectTxDAYcREs1Qma_F1Y-oSmLlb0hn0F2Za5Ss,866
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eegdash/utils.py,sha256=7TfQ9D0LrAJ7FgnSXEvWgeHWK2QqaqS-_WcWXD86ObQ,408
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eegdash/dataset/__init__.py,sha256=Qmzki5G8GaFlzTb10e4SmC3WkKuJyo1Ckii15tCEHAo,157
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eegdash/dataset/dataset.py,sha256=
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eegdash/dataset/dataset.py,sha256=DbQX_ajPExWE-6DmqCHWEDyJV-6eZI-dY7gi8y125BQ,7070
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eegdash/dataset/dataset_summary.csv,sha256=XF0vdHz77DFyVLTaET8lL5gQQ4r-q1xAfSDWH5GTPLA,23655
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eegdash/dataset/registry.py,sha256=genOqAuf9cQBnHhPqRwfLP7S1XsnkLot6sLyJozPtf4,4150
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eegdash/features/__init__.py,sha256=BXNhjvL4_SSFAY1lcP9nyGpkbJNtoOMH4AHlF6OyABo,4078
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eegdash/features/datasets.py,sha256=
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eegdash/features/datasets.py,sha256=eV4d86EU4fu1yoIMdPQnot6YZDRGG4qE9h77lk7iVhU,18317
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eegdash/features/decorators.py,sha256=v0qaJz_dcX703p1fvFYbAIXmwK3d8naYGlq7fRVKn_w,1313
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eegdash/features/extractors.py,sha256=H7h6tP3dKoRcjDJpWWAo0ppmokCq5QlhqMcehYwYV9s,6845
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eegdash/features/inspect.py,sha256=PmbWhx5H_WqpnorUpWONUSkUtaIHkZblRa_Xyk7Szyc,1569
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eegdash/features/feature_bank/spectral.py,sha256=bNB7skusePs1gX7NOU6yRlw_Gr4UOCkO_ylkCgybzug,3319
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eegdash/features/feature_bank/utils.py,sha256=DGh-Q7-XFIittP7iBBxvsJaZrlVvuY5mw-G7q6C-PCI,1237
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eegdash/hbn/__init__.py,sha256=U8mK64napnKU746C5DOwkX7W7sg3iW5kb_cVv2pfFq0,394
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eegdash/hbn/preprocessing.py,sha256=
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eegdash/hbn/windows.py,sha256=
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eegdash-0.3.9.
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eegdash-0.3.9.
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eegdash/hbn/preprocessing.py,sha256=zMkDFXQxWLn-Iy0cHRk-JL5c479HpclgIAGm-xuKPFg,2196
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eegdash/hbn/windows.py,sha256=Obv4L2hP8ACancUawkMYbiusfvhAw-mG_vqyDDMwOJ8,9890
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eegdash-0.3.9.dev129.dist-info/licenses/LICENSE,sha256=asisR-xupy_NrQBFXnx6yqXeZcYWLvbAaiETl25iXT0,931
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eegdash-0.3.9.dev129.dist-info/METADATA,sha256=_G43SOhR91fq4TW8pEem03XOxPDerz57mH0CejyMtvc,10362
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eegdash-0.3.9.dev129.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
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eegdash-0.3.9.dev129.dist-info/top_level.txt,sha256=zavO69HQ6MyZM0aQMR2zUS6TAFc7bnN5GEpDpOpFZzU,8
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eegdash-0.3.9.dev129.dist-info/RECORD,,
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