eegdash 0.0.9__py3-none-any.whl → 0.2.0__py3-none-any.whl

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Files changed (29) hide show
  1. eegdash/__init__.py +8 -1
  2. eegdash/api.py +690 -0
  3. eegdash/data_config.py +33 -27
  4. eegdash/data_utils.py +365 -222
  5. eegdash/dataset.py +60 -0
  6. eegdash/features/__init__.py +46 -18
  7. eegdash/features/datasets.py +62 -23
  8. eegdash/features/decorators.py +14 -6
  9. eegdash/features/extractors.py +22 -22
  10. eegdash/features/feature_bank/__init__.py +3 -3
  11. eegdash/features/feature_bank/complexity.py +6 -3
  12. eegdash/features/feature_bank/connectivity.py +16 -56
  13. eegdash/features/feature_bank/csp.py +3 -4
  14. eegdash/features/feature_bank/dimensionality.py +8 -5
  15. eegdash/features/feature_bank/signal.py +30 -4
  16. eegdash/features/feature_bank/spectral.py +10 -28
  17. eegdash/features/feature_bank/utils.py +48 -0
  18. eegdash/features/inspect.py +48 -0
  19. eegdash/features/serialization.py +4 -5
  20. eegdash/features/utils.py +9 -7
  21. eegdash/preprocessing.py +65 -0
  22. eegdash/utils.py +11 -0
  23. {eegdash-0.0.9.dist-info → eegdash-0.2.0.dist-info}/METADATA +67 -20
  24. eegdash-0.2.0.dist-info/RECORD +27 -0
  25. {eegdash-0.0.9.dist-info → eegdash-0.2.0.dist-info}/WHEEL +1 -1
  26. {eegdash-0.0.9.dist-info → eegdash-0.2.0.dist-info}/licenses/LICENSE +1 -0
  27. eegdash/main.py +0 -359
  28. eegdash-0.0.9.dist-info/RECORD +0 -22
  29. {eegdash-0.0.9.dist-info → eegdash-0.2.0.dist-info}/top_level.txt +0 -0
eegdash/data_config.py CHANGED
@@ -1,28 +1,34 @@
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  config = {
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- "required_fields": ["data_name"],
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- "attributes": {
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- "data_name": "str",
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- "dataset": "str",
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- "bidspath": "str",
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- "subject": "str",
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- "task": "str",
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- "session": "str",
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- "run": "str",
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- "sampling_frequency": "float",
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- "modality": "str",
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- "nchans": "int",
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- "ntimes": "int"
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- },
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- "description_fields": ["subject", "session", "run", "task", "age", "gender", "sex"],
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- "bids_dependencies_files": [
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- "dataset_description.json",
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- "participants.tsv",
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- "events.tsv",
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- "events.json",
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- "eeg.json",
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- "electrodes.tsv",
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- "channels.tsv",
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- "coordsystem.json"
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- ],
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- "accepted_query_fields": ["data_name", "dataset"]
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- }
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+ "required_fields": ["data_name"],
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+ # Default set of user-facing primary record attributes expected in the database. Records
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+ # where any of these are missing will be loaded with the respective attribute set to None.
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+ # Additional fields may be returned if they are present in the database, notably bidsdependencies.
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+ "attributes": {
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+ "data_name": "str",
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+ "dataset": "str",
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+ "bidspath": "str",
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+ "subject": "str",
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+ "task": "str",
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+ "session": "str",
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+ "run": "str",
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+ "sampling_frequency": "float",
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+ "modality": "str",
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+ "nchans": "int",
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+ "ntimes": "int", # note: this is really the number of seconds in the data, rounded down
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+ },
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+ # queryable descriptive fields for a given recording
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+ "description_fields": ["subject", "session", "run", "task", "age", "gender", "sex"],
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+ # list of filenames that may be present in the BIDS dataset directory that are used
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+ # to load and interpret a given BIDS recording.
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+ "bids_dependencies_files": [
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+ "dataset_description.json",
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+ "participants.tsv",
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+ "events.tsv",
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+ "events.json",
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+ "eeg.json",
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+ "electrodes.tsv",
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+ "channels.tsv",
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+ "coordsystem.json",
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+ ],
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+ "accepted_query_fields": ["data_name", "dataset"],
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+ }