ebi-eva-common-pyutils 0.6.9__py3-none-any.whl → 0.6.10__py3-none-any.whl

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Files changed (7) hide show
  1. ebi_eva_common_pyutils/biosamples_communicators.py +7 -1
  2. {ebi_eva_common_pyutils-0.6.9.dist-info → ebi_eva_common_pyutils-0.6.10.dist-info}/METADATA +1 -1
  3. {ebi_eva_common_pyutils-0.6.9.dist-info → ebi_eva_common_pyutils-0.6.10.dist-info}/RECORD +7 -7
  4. {ebi_eva_common_pyutils-0.6.9.data → ebi_eva_common_pyutils-0.6.10.data}/scripts/archive_directory.py +0 -0
  5. {ebi_eva_common_pyutils-0.6.9.dist-info → ebi_eva_common_pyutils-0.6.10.dist-info}/LICENSE +0 -0
  6. {ebi_eva_common_pyutils-0.6.9.dist-info → ebi_eva_common_pyutils-0.6.10.dist-info}/WHEEL +0 -0
  7. {ebi_eva_common_pyutils-0.6.9.dist-info → ebi_eva_common_pyutils-0.6.10.dist-info}/top_level.txt +0 -0
ebi_eva_common_pyutils/biosamples_communicators.py CHANGED
@@ -103,9 +103,15 @@ class HALCommunicator(AppLogger):
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  url = re.sub('{(' + k + ')(:.*)?}', v, url)
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  if join_url:
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  url += '/' + join_url
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+ text_only = False
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+ if 'text_only' in kwargs and kwargs.get('text_only'):
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+ text_only = kwargs.pop('text_only')
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  # Now query the url
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- json_response = self._req(method, url, **kwargs).json()
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+ response = self._req(method, url, **kwargs)
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+ if text_only:
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+ return response.text
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+ json_response = response.json()
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  # Depaginate the call if requested
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  if all_pages is True:
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  # This depagination code will iterate over all the pages available until the pages comes back without a
{ebi_eva_common_pyutils-0.6.9.dist-info → ebi_eva_common_pyutils-0.6.10.dist-info}/METADATA RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: ebi-eva-common-pyutils
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- Version: 0.6.9
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+ Version: 0.6.10
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  Summary: EBI EVA - Common Python Utilities
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  Home-page: https://github.com/EBIVariation/eva-common-pyutils
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  License: Apache
{ebi_eva_common_pyutils-0.6.9.dist-info → ebi_eva_common_pyutils-0.6.10.dist-info}/RECORD RENAMED
@@ -1,6 +1,6 @@
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  ebi_eva_common_pyutils/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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  ebi_eva_common_pyutils/assembly_utils.py,sha256=CklyCGlCjlFp0e9pugg6kSsh5L0xfCe2qPvA2eLVtn0,4187
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- ebi_eva_common_pyutils/biosamples_communicators.py,sha256=ngWuSvEYkkttkMnJ9Gjxc5D7ZSi7D3_JX1c8BnEO3os,7596
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+ ebi_eva_common_pyutils/biosamples_communicators.py,sha256=nyO0E_YpcAeBwbqOfbqe9RDxONq7Oe3NijSTGw7D01I,7815
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  ebi_eva_common_pyutils/command_utils.py,sha256=PtelWWqcC0eOwIVesjwBw3F9KaXRzEE_uAUJhQFZ4l8,2340
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  ebi_eva_common_pyutils/common_utils.py,sha256=ty_glvfRa3VGhnpAht4qtVkNNmv-IYfVtO958mY-BaA,1192
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  ebi_eva_common_pyutils/config.py,sha256=PtD2SgHf96kk21OA9tVIjEgsDXEFuAU-INy_kfQdoPw,4828
@@ -20,7 +20,7 @@ ebi_eva_common_pyutils/taxonomy/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm
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  ebi_eva_common_pyutils/taxonomy/taxonomy.py,sha256=p3XV4g3y0hEjyeZ4PwgN7Q3Et9G515ctQkSIo1kdDbU,2259
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  ebi_eva_common_pyutils/variation/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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  ebi_eva_common_pyutils/variation/contig_utils.py,sha256=kMNEW_P2yPnd8Xx1tep19hy5ee7ojxz6ZOO1grTQsRQ,5230
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- ebi_eva_common_pyutils-0.6.9.data/scripts/archive_directory.py,sha256=0lWJ0ju_AB2ni7lMnJXPFx6U2OdTGbe-WoQs-4BfKOM,4976
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+ ebi_eva_common_pyutils-0.6.10.data/scripts/archive_directory.py,sha256=0lWJ0ju_AB2ni7lMnJXPFx6U2OdTGbe-WoQs-4BfKOM,4976
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  ebi_eva_internal_pyutils/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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  ebi_eva_internal_pyutils/archive_directory.py,sha256=IxVEfh_gaCiT652k0Q_-58fonRusy1yzXu7BCO8yVLo,4989
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  ebi_eva_internal_pyutils/config_utils.py,sha256=EGRC5rsmU_ug7OY9-t1UW1XZXRsauSyZB9xPcBux8ts,7909
@@ -32,8 +32,8 @@ ebi_eva_internal_pyutils/mongodb/__init__.py,sha256=0oyTlkYZCV7udlPl09Zl-sDyE3c9
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  ebi_eva_internal_pyutils/mongodb/mongo_database.py,sha256=kesaJaaxYFeF_uYZBgL8tbufGKUXll7bXb4WlOS9vKM,9596
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  ebi_eva_internal_pyutils/nextflow/__init__.py,sha256=OOiJS8jZOz98q0t77NNog7aI_fFrVxi4kGmiSskuAqM,122
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  ebi_eva_internal_pyutils/nextflow/nextflow_pipeline.py,sha256=ew623hhK8jmFLQjJwLZbgBmW9RTiJBEULVqHfIUv_dc,10114
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- ebi_eva_common_pyutils-0.6.9.dist-info/LICENSE,sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ,11357
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- ebi_eva_common_pyutils-0.6.9.dist-info/METADATA,sha256=iEw5N92Ad8rSkru7KNyzfpSgUD0NCpuF4Eu1dPSVp1I,824
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- ebi_eva_common_pyutils-0.6.9.dist-info/WHEEL,sha256=2wepM1nk4DS4eFpYrW1TTqPcoGNfHhhO_i5m4cOimbo,92
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- ebi_eva_common_pyutils-0.6.9.dist-info/top_level.txt,sha256=sXoiqiGU8vlMQpFWDlKrekxhlusk06AhkOH3kSvDT6c,48
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- ebi_eva_common_pyutils-0.6.9.dist-info/RECORD,,
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+ ebi_eva_common_pyutils-0.6.10.dist-info/LICENSE,sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ,11357
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+ ebi_eva_common_pyutils-0.6.10.dist-info/METADATA,sha256=bBaC1wBXTMZ8Sip4qg0Fb9MpapoMsaga7Hh0C8pQBWs,825
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+ ebi_eva_common_pyutils-0.6.10.dist-info/WHEEL,sha256=2wepM1nk4DS4eFpYrW1TTqPcoGNfHhhO_i5m4cOimbo,92
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+ ebi_eva_common_pyutils-0.6.10.dist-info/top_level.txt,sha256=sXoiqiGU8vlMQpFWDlKrekxhlusk06AhkOH3kSvDT6c,48
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+ ebi_eva_common_pyutils-0.6.10.dist-info/RECORD,,