ebi-eva-common-pyutils 0.6.13__py3-none-any.whl → 0.6.14__py3-none-any.whl

{ebi_eva_common_pyutils-0.6.13.dist-info → ebi_eva_common_pyutils-0.6.14.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.2
 Name: ebi_eva_common_pyutils
-Version: 0.6.13
+Version: 0.6.14
 Summary: EBI EVA - Common Python Utilities
 Home-page: https://github.com/EBIVariation/eva-common-pyutils
 License: Apache

{ebi_eva_common_pyutils-0.6.13.dist-info → ebi_eva_common_pyutils-0.6.14.dist-info}/RECORD

@@ -20,20 +20,20 @@ ebi_eva_common_pyutils/taxonomy/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm
 ebi_eva_common_pyutils/taxonomy/taxonomy.py,sha256=p3XV4g3y0hEjyeZ4PwgN7Q3Et9G515ctQkSIo1kdDbU,2259
 ebi_eva_common_pyutils/variation/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 ebi_eva_common_pyutils/variation/contig_utils.py,sha256=kMNEW_P2yPnd8Xx1tep19hy5ee7ojxz6ZOO1grTQsRQ,5230
-ebi_eva_common_pyutils-0.6.13.data/scripts/archive_directory.py,sha256=0lWJ0ju_AB2ni7lMnJXPFx6U2OdTGbe-WoQs-4BfKOM,4976
+ebi_eva_common_pyutils-0.6.14.data/scripts/archive_directory.py,sha256=0lWJ0ju_AB2ni7lMnJXPFx6U2OdTGbe-WoQs-4BfKOM,4976
 ebi_eva_internal_pyutils/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 ebi_eva_internal_pyutils/archive_directory.py,sha256=IxVEfh_gaCiT652k0Q_-58fonRusy1yzXu7BCO8yVLo,4989
 ebi_eva_internal_pyutils/config_utils.py,sha256=EGRC5rsmU_ug7OY9-t1UW1XZXRsauSyZB9xPcBux8ts,7909
 ebi_eva_internal_pyutils/metadata_utils.py,sha256=t9PcXZdbfjDBP04GJenC4bxm2nOLd8oI_MP9eNe9IBQ,15221
 ebi_eva_internal_pyutils/mongo_utils.py,sha256=YxKHtb5ygDiGLOtEiiAMFCP2ow6FL9Kq0K5R0mWNdXY,3575
 ebi_eva_internal_pyutils/pg_utils.py,sha256=FUQVwiX_7F2-4sSzoaCVX2me0zAqR8nGIj6NW5d304A,4398
-ebi_eva_internal_pyutils/spring_properties.py,sha256=j7_u_2ZVazXK4u5kJrQpJ1fljE0HsC1RbXpmJ7WYh5A,15069
+ebi_eva_internal_pyutils/spring_properties.py,sha256=Tn207DmZehFt7oExseNsXFAnsxr7bX9yiGl4t9mpGVA,15165
 ebi_eva_internal_pyutils/mongodb/__init__.py,sha256=0oyTlkYZCV7udlPl09Zl-sDyE3c97QZMMTEFIa6uYIw,76
 ebi_eva_internal_pyutils/mongodb/mongo_database.py,sha256=kesaJaaxYFeF_uYZBgL8tbufGKUXll7bXb4WlOS9vKM,9596
 ebi_eva_internal_pyutils/nextflow/__init__.py,sha256=OOiJS8jZOz98q0t77NNog7aI_fFrVxi4kGmiSskuAqM,122
 ebi_eva_internal_pyutils/nextflow/nextflow_pipeline.py,sha256=ew623hhK8jmFLQjJwLZbgBmW9RTiJBEULVqHfIUv_dc,10114
-ebi_eva_common_pyutils-0.6.13.dist-info/LICENSE,sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ,11357
-ebi_eva_common_pyutils-0.6.13.dist-info/METADATA,sha256=Ogn0HxF_NPkmxL1k4oXhsdYvyWwcflXWGtJGkY-JkTo,956
-ebi_eva_common_pyutils-0.6.13.dist-info/WHEEL,sha256=jB7zZ3N9hIM9adW7qlTAyycLYW9npaWKLRzaoVcLKcM,91
-ebi_eva_common_pyutils-0.6.13.dist-info/top_level.txt,sha256=sXoiqiGU8vlMQpFWDlKrekxhlusk06AhkOH3kSvDT6c,48
-ebi_eva_common_pyutils-0.6.13.dist-info/RECORD,,
+ebi_eva_common_pyutils-0.6.14.dist-info/LICENSE,sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ,11357
+ebi_eva_common_pyutils-0.6.14.dist-info/METADATA,sha256=13ykCwUwZJ9YSL7MG8vItGSaw-4dvFvLZuJE-U2vVKg,956
+ebi_eva_common_pyutils-0.6.14.dist-info/WHEEL,sha256=jB7zZ3N9hIM9adW7qlTAyycLYW9npaWKLRzaoVcLKcM,91
+ebi_eva_common_pyutils-0.6.14.dist-info/top_level.txt,sha256=sXoiqiGU8vlMQpFWDlKrekxhlusk06AhkOH3kSvDT6c,48
+ebi_eva_common_pyutils-0.6.14.dist-info/RECORD,,

ebi_eva_internal_pyutils/spring_properties.py

@@ -12,6 +12,7 @@
 # See the License for the specific language governing permissions and
 # limitations under the License.
 from collections import defaultdict
+from urllib.parse import quote_plus
 
 from ebi_eva_internal_pyutils.config_utils import get_mongo_creds_for_profile, get_accession_pg_creds_for_profile, \
     get_count_service_creds_for_profile, get_properties_from_xml_file, get_variant_load_job_tracker_creds_for_profile
@@ -55,7 +56,8 @@ class SpringPropertiesGenerator:
     def _mongo_properties(self):
         mongo_host, mongo_user, mongo_pass = get_mongo_creds_for_profile(
             self.maven_profile, self.private_settings_file)
-        username_with_password = f'{mongo_user}:{mongo_pass}@' if mongo_user is not None and mongo_pass is not None else ''
+        username_with_password = (f'{quote_plus(mongo_user)}:{quote_plus(mongo_pass)}@'
+                                  if mongo_user is not None and mongo_pass is not None else '')
         return {
             'spring.data.mongodb.uri': f'mongodb://{username_with_password}{mongo_host}/?retryWrites=true&authSource=admin',
         }