docugraph 0.1.0__py3-none-any.whl

docugraph-0.1.0.dist-info/METADATA

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+Metadata-Version: 2.5
+Name: docugraph
+Version: 0.1.0
+Summary: Documentation RAG for coding agents: vector search, knowledge graph, agent memory, and an MCP server — torch-free local embeddings via fastembed
+Author-email: Jim Cuttler <jimcuttler@gmail.com>
+License: Apache-2.0
+License-File: LICENSE
+License-File: NOTICE
+Keywords: coding-agent,documentation,knowledge-graph,mcp,rag,vector-search
+Classifier: Development Status :: 4 - Beta
+Classifier: Intended Audience :: Developers
+Classifier: License :: OSI Approved :: Apache Software License
+Classifier: Programming Language :: Python :: 3.11
+Classifier: Programming Language :: Python :: 3.12
+Classifier: Programming Language :: Python :: 3.13
+Classifier: Topic :: Scientific/Engineering :: Artificial Intelligence
+Classifier: Topic :: Software Development :: Documentation
+Requires-Python: <3.14,>=3.11
+Requires-Dist: aiofiles>=23.2.0
+Requires-Dist: click>=8.1.0
+Requires-Dist: crawl4ai>=0.7.8
+Requires-Dist: fastembed>=0.4.0
+Requires-Dist: graphiti-core[kuzu]==0.30.2
+Requires-Dist: httpx>=0.27.0
+Requires-Dist: kuzu==0.11.3
+Requires-Dist: lancedb<0.26,>=0.6.0
+Requires-Dist: mcp<2,>=1.0.0
+Requires-Dist: onnxruntime<1.24
+Requires-Dist: pandas>=2.0.0
+Requires-Dist: pyarrow>=15.0.0
+Requires-Dist: pydantic-settings>=2.2.0
+Requires-Dist: pydantic>=2.6.0
+Requires-Dist: pyyaml>=6.0
+Requires-Dist: rich>=13.7.0
+Requires-Dist: tenacity>=8.2.0
+Requires-Dist: typer>=0.9.0
+Requires-Dist: xxhash>=3.4.0
+Provides-Extra: all
+Requires-Dist: anthropic<2,>=0.18.0; extra == 'all'
+Requires-Dist: cohere<8,>=5.0.0; extra == 'all'
+Requires-Dist: ollama>=0.1.0; extra == 'all'
+Requires-Dist: openai<4,>=1.12.0; extra == 'all'
+Provides-Extra: cloud
+Requires-Dist: anthropic<2,>=0.18.0; extra == 'cloud'
+Requires-Dist: cohere<8,>=5.0.0; extra == 'cloud'
+Requires-Dist: openai<4,>=1.12.0; extra == 'cloud'
+Provides-Extra: dev
+Requires-Dist: mypy>=1.8.0; extra == 'dev'
+Requires-Dist: pre-commit>=3.6.0; extra == 'dev'
+Requires-Dist: pytest-asyncio>=0.23.0; extra == 'dev'
+Requires-Dist: pytest-cov>=4.1.0; extra == 'dev'
+Requires-Dist: pytest>=8.0.0; extra == 'dev'
+Requires-Dist: ruff>=0.16.0; extra == 'dev'
+Requires-Dist: types-pyyaml; extra == 'dev'
+Provides-Extra: ollama
+Requires-Dist: ollama>=0.1.0; extra == 'ollama'
+Description-Content-Type: text/markdown
+
+# DocuGraph AI v1
+
+Documentation RAG for coding agents: vector search, a documentation
+knowledge graph, agent memory, and an **MCP server** — with **torch-free
+local embeddings** (pure ONNX via [fastembed](https://github.com/qdrant/fastembed)).
+
+The MCP stdio server is the primary surface: it plugs directly into Claude
+Code and other MCP clients. The CLI is for out-of-band index bootstrapping
+(crawl / index / search / stats / memory / graph / config).
+
+## Features
+
+- **Multi-source ingestion**: crawl web docs, index local files, clone & index git repos, parse API specs
+- **Hybrid search**: vector similarity + keyword (BM25), fused with RRF
+- **Documentation knowledge graph**: entities/relationships over your docs (Kuzu via Graphiti)
+- **Agent memory**: persistent, repository/branch-scoped key-value store
+- **Optional reranking**: local multilingual cross-encoder (BAAI/bge-reranker-v2-m3), opt-in
+- **Torch-free**: default embeddings and reranking run on ONNX — no PyTorch in the dependency tree
+
+## Quick start
+
+### Installation
+
+```bash
+pip install docugraph
+```
+
+**Requires Python 3.11–3.13.** CI runs the suite on all three, on Linux. Python
+3.14 is excluded deliberately, for two independent reasons: `kuzu` 0.11.3 — the
+final release, and the version this package pins — publishes no 3.14 wheels for
+macOS or Windows, and fastembed's 3.14 requirement (`onnxruntime>=1.24.2`) cannot
+be satisfied alongside the `onnxruntime<1.24` cap this package carries.
+
+Or work from a checkout — clone this repository, then from its root:
+
+```bash
+# With uv (recommended)
+uv sync --extra dev
+
+# Or with pip
+python -m venv .venv && source .venv/bin/activate
+pip install -e '.[dev]'
+```
+
+First use downloads the default embedding model (`BAAI/bge-small-en-v1.5`,
+~130 MB ONNX) and caches it under `FASTEMBED_CACHE_PATH`. Set that variable to
+keep the weights somewhere durable; unset, fastembed puts them in a
+`fastembed_cache` subdirectory of the system temp directory, which the OS is
+free to clear.
+
+**URL crawling needs a browser that the Python install does not include.**
+Crawl4AI drives Playwright's Chromium, so run this once before using
+`docugraph crawl` or the `crawl_url` tool:
+
+```bash
+playwright install chromium
+# On Linux, add --with-deps to install the browser's system libraries too:
+#   playwright install --with-deps chromium
+```
+
+This is ~190 MB and is cached, so it is a one-off. `index local`, `index git`,
+`search`, `memory` and `stats` do not need it — only fetching a URL does.
+
+### MCP integration with Claude Code (primary surface)
+
+The MCP server is a console script, so where it lives depends on how you
+installed the package. For an MCP client, an isolated tool install is the least
+fuss: it puts the script somewhere stable that does not move with a project
+directory.
+
+```bash
+pipx install docugraph      # or: uv tool install docugraph
+```
+
+Then ask your shell where it landed:
+
+```bash
+which docugraph-mcp         # macOS, Linux
+where docugraph-mcp         # Windows
+```
+
+and use that exact path in your Claude Code MCP configuration:
+
+```json
+{
+  "mcpServers": {
+    "docugraph": {
+      "command": "<the path `which docugraph-mcp` printed>",
+      "env": {}
+    }
+  }
+}
+```
+
+An MCP client launches the server directly rather than through a shell, so it
+does not inherit your `PATH`: the short form `"command": "docugraph-mcp"` fails
+with `No such file or directory` even when that directory is on it. That is why
+the path is spelled out.
+
+If you would rather not manage an install, this is equivalent and works
+straight from a checkout, with no path to update when it moves:
+
+```json
+{
+  "mcpServers": {
+    "docugraph": {
+      "command": "uv",
+      "args": ["--directory", "/absolute/path/to/docugraph", "run", "docugraph-mcp"],
+      "env": {}
+    }
+  }
+}
+```
+
+From a checkout, clone this repository and run `uv sync` (`pip install -e '.[dev]'`
+works too). The script is then at `.venv/bin/docugraph-mcp`
+(`Scripts\docugraph-mcp.exe` on Windows), and that is the path to give the
+client.
+
+The server speaks JSON-RPC over stdio and exposes nine tools:
+
+| Tool | Purpose |
+|------|---------|
+| `search_docs` | Vector search over indexed documentation |
+| `hybrid_search` | Vector + keyword (+ optional graph) fusion; `rerank` opt-in |
+| `crawl_url` | Crawl a URL and index it ¹ |
+| `index_git` | Clone and index a git repository |
+| `memory_store` | Store a value in repo/branch-scoped agent memory |
+| `memory_recall` | Retrieve a stored value |
+| `graph_query` | Query the documentation knowledge graph ² |
+| `graph_add` | Extract entities/relationships from text into the graph ² |
+| `get_stats` | Indexing statistics |
+
+¹ Needs Playwright's Chromium — see the installation step above.
+² Needs an LLM configured — Ollama locally, or an OpenAI/Anthropic key. See
+[the knowledge graph section](#the-documentation-knowledge-graph).
+
+### CLI (index bootstrap + one-off commands)
+
+Run these from the repository root. `uv sync` installs the `docugraph` command
+into the project's virtual environment but does not put that directory on your
+`PATH`, so each command below is prefixed with `uv run`. If you activated the
+virtual environment (`source .venv/bin/activate`, as the pip instructions do),
+drop the prefix and run them as bare `docugraph …`.
+
+```bash
+# Crawl and index documentation (needs the Chromium install from above)
+uv run docugraph crawl https://fastapi.tiangolo.com/tutorial/first-steps/
+
+# Index a local docs directory
+uv run docugraph index local ./docs
+
+# Search indexed content
+uv run docugraph search "how to create a path operation"
+uv run docugraph search "async error handling" --top-k 10
+
+# Rerank with the local multilingual cross-encoder (downloads about 2 GB once)
+uv run docugraph search "path operations" --rerank
+
+# Documentation knowledge graph — needs an LLM (Ollama locally, or an
+# OPENAI_API_KEY/ANTHROPIC_API_KEY); see "The documentation knowledge graph"
+uv run docugraph graph add "FastAPI depends on Starlette and Pydantic."
+uv run docugraph graph search "what does FastAPI depend on?"
+
+# Agent memory
+uv run docugraph memory set build.status green
+uv run docugraph memory get build.status
+
+# Stats + reset
+uv run docugraph stats
+uv run docugraph clear
+
+# Configuration
+uv run docugraph config show
+uv run docugraph config init
+
+# Run the MCP server manually (usually launched by the MCP client)
+uv run docugraph mcp-server
+```
+
+### Python API
+
+```python
+import asyncio
+from docugraph.ingestion.crawler import DocCrawler
+from docugraph.ingestion.chunker import Chunker
+from docugraph.storage.vector_store import VectorStore
+
+
+async def main():
+    crawler = DocCrawler()
+    doc = await crawler.crawl_single("https://docs.python.org/3/tutorial/")
+
+    chunker = Chunker()
+    chunks = chunker.chunk_document(doc)
+
+    store = VectorStore()  # embeds with fastembed by default
+    store.add_chunks(chunks)
+
+    results = store.search("how to use lists", top_k=5)
+    for r in results:
+        print(f"{r.score:.4f}: {r.chunk.content[:100]}...")
+
+
+asyncio.run(main())
+```
+
+## Configuration
+
+Create `~/.docugraph/config.yaml` (all fields optional — defaults shown):
+
+```yaml
+storage:
+  data_dir: ~/.docugraph/data
+
+embeddings:
+  provider: auto            # auto | fastembed | openai | ollama | cohere
+  model: BAAI/bge-small-en-v1.5   # fastembed's default; see the note below
+  # dimensions: auto-detected from the model
+  batch_size: 32
+
+crawler:
+  max_concurrent: 5
+  rate_limit: 2.0
+  respect_robots: true
+```
+
+`provider: auto` resolves to **fastembed** (local ONNX) — nothing about your
+environment changes that, so documents are not sent anywhere for embedding
+unless you name a cloud provider. Set `provider: openai` (or `cohere`) to send
+them there; that is the request, and it needs a model named with it: the entry
+above is fastembed's own default and no cloud provider has one. Any field can be
+overridden by environment variable, e.g. `DOCUGRAPH_EMBEDDINGS__MODEL` or
+`DOCUGRAPH_EMBEDDINGS__PROVIDER`.
+
+See [docs/configuration.md](https://github.com/CJ-coding-apps/docugraph/blob/main/docs/configuration.md) for the full reference,
+including the embedding-model consistency guard and the graph LLM requirement.
+
+## The documentation knowledge graph
+
+DocuGraph builds a temporal entity/relationship graph over your docs (Kuzu,
+via [Graphiti](https://github.com/getzep/graphiti)). Embeddings for the graph
+are served by the same torch-free fastembed adapter — **no embedding service
+required**. However, Graphiti performs entity extraction with an **LLM**, so
+`graph add` / `graph_query` need an LLM configured (Ollama locally, or an
+OpenAI/Anthropic key). Without one, the graph tools degrade gracefully with a
+clear message; vector and keyword search are unaffected.
+
+### KuzuDB version
+
+`kuzu` is pinned to `==0.11.3` in `pyproject.toml` (reached through
+`graphiti-core[kuzu]`, which requires `kuzu>=0.11.3`). Kuzu is archived upstream —
+0.11.3 is the final release — and its on-disk format is not stable before 1.0, so a
+database written by one Kuzu version may not be readable by another. Treat the pin
+as a migration boundary, not a floor: to move versions, upgrade and then re-ingest
+rather than pointing the new version at the old graph file.
+
+## Architecture
+
+```
+┌─────────────────────────────────────────────────────────────┐
+│                      Interfaces                             │
+│                 MCP server  │  CLI                          │
+├─────────────────────────────────────────────────────────────┤
+│                      Retrieval Layer                        │
+│        Hybrid Search  │  Optional Rerank  │  Context        │
+├─────────────────────────────────────────────────────────────┤
+│                      Storage Layer                          │
+│        LanceDB (Vectors)  │  Kuzu (Graph)  │  Memory        │
+├─────────────────────────────────────────────────────────────┤
+│                      Ingestion Pipeline                     │
+│           Crawl4AI  │  Chunker  │  Graphiti extraction      │
+└─────────────────────────────────────────────────────────────┘
+```
+
+## Technology stack
+
+- **Embeddings & reranking**: fastembed (pure ONNX, no torch) — default `bge-small-en-v1.5`; opt-in reranker `bge-reranker-v2-m3`
+- **Vector database**: LanceDB (embedded)
+- **Graph database**: Kuzu via Graphiti (temporal knowledge graphs)
+- **Web crawler**: Crawl4AI (JS rendering, clean Markdown)
+- **MCP**: Model Context Protocol for Claude Code integration
+- Optional cloud/local backends: OpenAI, Cohere, Ollama (extras)
+
+## Acknowledgements
+
+This project uses Crawl4AI (https://github.com/unclecode/crawl4ai) for web data extraction.
+
+- [fastembed](https://github.com/qdrant/fastembed) — local ONNX embeddings, and the optional reranker.
+- [Graphiti](https://github.com/getzep/graphiti) — temporal knowledge-graph extraction.
+- [LanceDB](https://github.com/lancedb/lancedb) — the embedded vector store.
+- [Kùzu](https://github.com/kuzudb/kuzu) — the embedded graph database.
+
+## License
+
+Apache-2.0 — see `LICENSE`, and `NOTICE` for the Crawl4AI attribution.

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docugraph-0.1.0.dist-info/entry_points.txt

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+[console_scripts]
+docugraph = docugraph.interfaces.cli:main
+docugraph-mcp = docugraph.interfaces.mcp_server:main

docugraph-0.1.0.dist-info/licenses/LICENSE

@@ -0,0 +1,201 @@
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docugraph-0.1.0.dist-info/licenses/NOTICE

@@ -0,0 +1,10 @@
+DocuGraph
+Copyright 2026 Jim Cuttler
+
+Licensed under the Apache License, Version 2.0 (see LICENSE).
+
+This product includes software developed by UncleCode (https://x.com/unclecode)
+as part of the Crawl4AI project (https://github.com/unclecode/crawl4ai).
+Crawl4AI is used unmodified as the web-crawling library behind `docugraph crawl`
+and the `crawl_url` tool. Its license (Apache-2.0 with an attribution clause) is
+at https://github.com/unclecode/crawl4ai/blob/main/LICENSE.