dnastack-client-library 3.1.162__py3-none-any.whl → 3.1.169__py3-none-any.whl

dnastack/cli/commands/explorer/questions/commands.py

@@ -152,6 +152,8 @@ def init_questions_commands(group: Group):
             if invalid_ids:
                 click.echo(f"Error: Invalid collection IDs for this question: {', '.join(invalid_ids)}", err=True)
                 raise click.Abort()
+        else:
+            collection_ids = [col.id for col in question.collections]
         
         # Execute the question
         results_iter = client.ask_federated_question(

dnastack/client/workbench/ewes/models.py

@@ -101,7 +101,7 @@ class ExtendedRunRequest(BaseModel):
     submitted_by: Optional[str]
     workflow_params: Optional[Dict]
     workflow_engine_parameters: Optional[Dict]
-    dependencies: Optional[Dict[str, RunDependency]]
+    dependencies: Optional[List[RunDependency]]
     tags: Optional[Dict]
 
 
@@ -141,7 +141,7 @@ class ExtendedRun(BaseModel):
     task_logs: Optional[List[Log]]
     task_logs_url: Optional[str]
     outputs: Optional[Dict]
-    dependencies: Optional[Dict[str, RunDependency]]
+    dependencies: Optional[List[RunDependency]]
     events: Optional[List[RunEvent]]
 
 

dnastack/constants.py

@@ -1,5 +1,5 @@
 import os
 
-__version__ = "v3.1.162"
+__version__ = "v3.1.169"
 
 LOCAL_STORAGE_DIRECTORY = os.path.join(os.path.expanduser("~"), '.dnastack')

{dnastack_client_library-3.1.162.dist-info → dnastack_client_library-3.1.169.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: dnastack-client-library
-Version: 3.1.162
+Version: 3.1.169
 Summary: DNAstack's GA4GH library and CLI
 Author-email: DNAstack <devs@dnastack.com>
 License: Apache License, Version 2.0

{dnastack_client_library-3.1.162.dist-info → dnastack_client_library-3.1.169.dist-info}/RECORD

@@ -1,6 +1,6 @@
 dnastack/__init__.py,sha256=mslf7se8vBSK_HkqWTGPdibeVhT4xyKXgzQBV7dEK1M,333
 dnastack/__main__.py,sha256=EKmtIs4TBseQJi-OT_U6LqRyKLiyrGTBuTQg9zE-G2I,4376
-dnastack/constants.py,sha256=6P579Aw9VUw8nJ_eFzwu-eQjSXMo09xI9vmHC62W9wM,114
+dnastack/constants.py,sha256=Tq2vjdggA3iR5QV312U48DSuTqrJDwPFTHyEc_WGyls,114
 dnastack/feature_flags.py,sha256=RK_V_Ovncoe6NeTheAA_frP-kYkZC1fDlTbbup2KYG4,1419
 dnastack/json_path.py,sha256=TyghhDf7nGQmnsUWBhenU_fKsE_Ez-HLVER6HgH5-hU,2700
 dnastack/omics_cli.py,sha256=ZppKZTHv_XjUUZyRIzSkx0Ug5ODAYrCOTsU0ezCOVrA,3694
@@ -52,7 +52,7 @@ dnastack/cli/commands/drs/utils.py,sha256=tGogaIlXKnk03GqitzeDfo893JlP7Nc_X28sH-
 dnastack/cli/commands/explorer/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 dnastack/cli/commands/explorer/commands.py,sha256=X1gvnH3TPoE4BIVBBVA2BMRQpA4qT3XhcjxsfRftMoI,589
 dnastack/cli/commands/explorer/questions/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-dnastack/cli/commands/explorer/questions/commands.py,sha256=37-BnAxCh0dEPe5BpBh06esMdtfoF73xL5zhQ2aLK5w,6129
+dnastack/cli/commands/explorer/questions/commands.py,sha256=iV25gL9kLADjsBmQkUHRnYp-U5bIJuYDUIjfsGpT0FQ,6213
 dnastack/cli/commands/explorer/questions/tables.py,sha256=cb8YKqY7Qxrm2ROz7z8H6bGp964BNEipuX8KaThTveo,4337
 dnastack/cli/commands/explorer/questions/utils.py,sha256=HNBHEV_F-41IyfnG1ZfxMnacp11UvhwnH4Z2DKgxPZs,7634
 dnastack/cli/commands/publisher/__init__.py,sha256=G8WNdx1UwanoA4X349ghv8Zyv5YizB8ryeJmwu9px8o,443
@@ -138,7 +138,7 @@ dnastack/client/workbench/base_client.py,sha256=KlkSO1c32bKhojfco8NcVBVSY5x_PZAC
 dnastack/client/workbench/models.py,sha256=RBo7wmWMSDkgiFZHaWh2ehKeTM8ERywug1bMGKDOm0k,446
 dnastack/client/workbench/ewes/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 dnastack/client/workbench/ewes/client.py,sha256=yIqjwyyY9q0NrxpTX6LrnlnjavHoa6Fo073O3Lokkaw,15637
-dnastack/client/workbench/ewes/models.py,sha256=MBSkYxFW8nX9OlzijJxzZ3I7zCUFHM83PXF4zXbnZeY,8404
+dnastack/client/workbench/ewes/models.py,sha256=3XGVMW2eXlnd84BuluhjvNfKvxVrd06WTdZO6G4Kc7w,8394
 dnastack/client/workbench/samples/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 dnastack/client/workbench/samples/client.py,sha256=2X34SYTjV6n4yZz0q7Kaa4NPWDHRi2ut0uJWL3zXZWA,5901
 dnastack/client/workbench/samples/models.py,sha256=g_04aDltLVRVCstOGkINqJNo1XSKB2aXWwnMfDEhC0Y,1466
@@ -194,9 +194,9 @@ dnastack/http/authenticators/oauth2_adapter/device_code_flow.py,sha256=dXI5CyUcs
 dnastack/http/authenticators/oauth2_adapter/factory.py,sha256=ZtNXOklWEim-26ooNoPp3ji_hRg1vf4fHHnY94F0wLI,1087
 dnastack/http/authenticators/oauth2_adapter/models.py,sha256=iY7asrSElyjubInrGV5rJKKZAxJWeq7csnaj-EqMq00,943
 dnastack/http/authenticators/oauth2_adapter/token_exchange.py,sha256=nSuAsSKWa_UNqHSbPMOEk4komaFITYAnE04Sk5WOrLc,6332
-dnastack_client_library-3.1.162.dist-info/licenses/LICENSE,sha256=uwybO-wUbQhxkosgjhJlxmYATMy-AzoULFO9FUedE34,11580
-dnastack_client_library-3.1.162.dist-info/METADATA,sha256=hE05Y8wAcmuy8xIoXPuktKrh5pqISri-tDkdQ8Guv0s,1766
-dnastack_client_library-3.1.162.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
-dnastack_client_library-3.1.162.dist-info/entry_points.txt,sha256=Y6OeicsiyGn3-8D-SiV4NiKlJgXfkSqK88kFBR6R1rY,89
-dnastack_client_library-3.1.162.dist-info/top_level.txt,sha256=P2RgRyqJ7hfNy1wLVRoVLJYEppUVkCX3syGK9zBqkt8,9
-dnastack_client_library-3.1.162.dist-info/RECORD,,
+dnastack_client_library-3.1.169.dist-info/licenses/LICENSE,sha256=uwybO-wUbQhxkosgjhJlxmYATMy-AzoULFO9FUedE34,11580
+dnastack_client_library-3.1.169.dist-info/METADATA,sha256=syyJILfwpFIQudoBRHaL2q35gT7JXarosSPIPgsUw2Y,1766
+dnastack_client_library-3.1.169.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
+dnastack_client_library-3.1.169.dist-info/entry_points.txt,sha256=Y6OeicsiyGn3-8D-SiV4NiKlJgXfkSqK88kFBR6R1rY,89
+dnastack_client_library-3.1.169.dist-info/top_level.txt,sha256=P2RgRyqJ7hfNy1wLVRoVLJYEppUVkCX3syGK9zBqkt8,9
+dnastack_client_library-3.1.169.dist-info/RECORD,,