dnastack-client-library 3.1.120a0__py3-none-any.whl → 3.1.124__py3-none-any.whl

dnastack/cli/commands/publisher/datasources/commands.py

@@ -17,7 +17,7 @@ def init_datasources_commands(group: Group):
             ArgumentSpec(
                 name='type',
                 arg_names=['--type'],
-                help='Filter datasources by type (e.g., "AWS")',
+                help='Filter datasources by type (e.g., "Amazon AWS S3, postgresql")',
                 required=False
             ),
         ]

dnastack/client/collections/client.py

@@ -21,6 +21,10 @@ from dnastack.http.session import ClientError, HttpSession, HttpError
 STANDARD_COLLECTION_SERVICE_TYPE_V1_0 = ServiceType(group='com.dnastack',
                                                     artifact='collection-service',
                                                     version='1.0.0')
+STANDARD_DATASOURCE_SERVICE_TYPE_V1_0 = ServiceType(group='com.dnastack',
+                                                    artifact='collection-service',
+                                                    version='1.0.0')
+
 
 # Feature: No support for service registry integration
 # Feature: Only using "plural" per-collection data connect endpoint
@@ -29,6 +33,11 @@ EXPLORER_COLLECTION_SERVICE_TYPE_V1_0 = ServiceType(group='com.dnastack.explorer
                                                     version='1.0.0')
 
 
+STANDARD_DATA_SOURCE_SERVICE_TYPE_V1_0 = ServiceType(group='com.dnastack',
+                                                    artifact='collection-service',
+                                                    version='1.0.0')
+
+
 class InvalidApiResponse(RuntimeError):
     pass
 

dnastack/client/datasources/client.py

@@ -5,7 +5,8 @@ from dnastack.client.base_client import BaseServiceClient
 from dnastack.client.base_exceptions import (
     UnauthenticatedApiAccessError, UnauthorizedApiAccessError
 )
-from dnastack.client.collections.client import STANDARD_COLLECTION_SERVICE_TYPE_V1_0
+from dnastack.client.collections.client import STANDARD_COLLECTION_SERVICE_TYPE_V1_0, \
+    STANDARD_DATASOURCE_SERVICE_TYPE_V1_0
 from dnastack.client.collections.model import PageableApiError
 from dnastack.client.datasources.model import DataSource, DataSourceListOptions
 from dnastack.client.result_iterator import ResultLoader, InactiveLoaderError, ResultIterator
@@ -96,14 +97,14 @@ class DataSourceServiceClient(BaseServiceClient):
 
     @staticmethod
     def get_adapter_type() -> str:
-        return 'collections'
+        return 'dataousrces'
 
     @classmethod
     def get_supported_service_types(cls) -> List[str]:
         """
         Returns supported service types.
         """
-        return [ STANDARD_COLLECTION_SERVICE_TYPE_V1_0,]
+        return [ STANDARD_DATASOURCE_SERVICE_TYPE_V1_0,]
 
     def list_datasources(self, type: Optional[str] = None, trace: Optional[Span] = None,
                          max_results: Optional[int] = None) -> DataSourcesResponse:
@@ -114,7 +115,7 @@ class DataSourceServiceClient(BaseServiceClient):
 
         trace = trace or Span(origin=self)
         loader = DataSourceListResultLoader(
-            service_url=f"{self.url}/connections/data-sources",
+            service_url=f"{self.url}data-sources",
             http_session=self.create_http_session(),
             trace=trace,
             list_options=list_options,

dnastack/client/workbench/ewes/models.py

@@ -113,6 +113,7 @@ class EventType(str, Enum):
 
 class RunEventMetadata(BaseModel):
     message: Optional[str]
+    state: Optional[State]
     old_state: Optional[State]
     new_state: Optional[State]
 

dnastack/constants.py

@@ -1,5 +1,5 @@
 import os
 
-__version__ = "v3.1.120a"
+__version__ = "v3.1.124"
 
 LOCAL_STORAGE_DIRECTORY = os.path.join(os.path.expanduser("~"), '.dnastack')

{dnastack_client_library-3.1.120a0.dist-info → dnastack_client_library-3.1.124.dist-info}/METADATA

@@ -1,6 +1,6 @@
-Metadata-Version: 2.2
+Metadata-Version: 2.4
 Name: dnastack-client-library
-Version: 3.1.120a0
+Version: 3.1.124
 Summary: "DNAstack's GA4GH library and CLI"
 Home-page: https://www.dnastack.com
 Author: DNAstack
@@ -23,5 +23,6 @@ Provides-Extra: test
 Requires-Dist: selenium>=3.141.0; extra == "test"
 Requires-Dist: pyjwt>=2.1.0; extra == "test"
 Requires-Dist: jsonpath-ng>=1.5.3; extra == "test"
+Dynamic: license-file
 
 "GA4GH API client and command line tool. Please check out [the documentation](https://docs.omics.ai/products/analysis/python-library) for more details."

{dnastack_client_library-3.1.120a0.dist-info → dnastack_client_library-3.1.124.dist-info}/RECORD

@@ -1,6 +1,6 @@
 dnastack/__init__.py,sha256=Bpfm77MeoZNmZHSgDK9wlgVPkcdE73ur6_7Zihorb4o,263
 dnastack/__main__.py,sha256=3rydT8oj5G1IN0asiqv9oaQw2xmyIlVge8c8wUjo0HA,3532
-dnastack/constants.py,sha256=emInQGO_r53MWwHbI63wDj3e9qlVQaEQ5oP5zP86Qx0,115
+dnastack/constants.py,sha256=SeL_e6zU1ITEcTndBvJJpkTvNcFJHIUIENlLyva-uTc,114
 dnastack/feature_flags.py,sha256=RK_V_Ovncoe6NeTheAA_frP-kYkZC1fDlTbbup2KYG4,1419
 dnastack/json_path.py,sha256=TyghhDf7nGQmnsUWBhenU_fKsE_Ez-HLVER6HgH5-hU,2700
 dnastack/omics_cli.py,sha256=ZppKZTHv_XjUUZyRIzSkx0Ug5ODAYrCOTsU0ezCOVrA,3694
@@ -56,7 +56,7 @@ dnastack/cli/commands/publisher/collections/items.py,sha256=gmSCaXXqxk4lElZnqkU6
 dnastack/cli/commands/publisher/collections/tables.py,sha256=N348MU_p-OKweJwKYtNbpvCD3ZmGGbS-quz7gnsAc1c,2130
 dnastack/cli/commands/publisher/collections/utils.py,sha256=GNgGv29z7eumQqbw1IFFasJeDyxH2KQGQl0q6UPooVU,6244
 dnastack/cli/commands/publisher/datasources/__init__.py,sha256=90suC61lfFF1WzIU9f8lO0_DiLWIQF2Dy46_Yad3CD8,327
-dnastack/cli/commands/publisher/datasources/commands.py,sha256=TdR55CxqlpN62GiHeWIfPfRsorfrzDj7GwZlmBqseA0,1298
+dnastack/cli/commands/publisher/datasources/commands.py,sha256=nG_h44zWA061J5UZCofNhYGpBY-rJhAQuvPEdaGS8LY,1320
 dnastack/cli/commands/publisher/datasources/utils.py,sha256=DGVZY6e0Faa0sNRXxqu50z7kGACX4YYkF-cgtMLaUQc,745
 dnastack/cli/commands/workbench/__init__.py,sha256=H4CGbc31-21mRZqJMtzi2Cg4e_D9a9ibqFjwXQTcXNY,1092
 dnastack/cli/commands/workbench/utils.py,sha256=V2I192k4XAg2h-DrsdatqIZfguflh6WR7q5pSBojUX0,4354
@@ -113,10 +113,10 @@ dnastack/client/factory.py,sha256=PQGYUGhKeqyJtEtc-bZM5OlEup9K7lB-qwmNiII_4HU,62
 dnastack/client/models.py,sha256=qkk06k12UZ-kG8x2fT198CX9TFJ8Svt3BjfzuTitqBA,2888
 dnastack/client/result_iterator.py,sha256=00zEs7YbPJyt8d-6j7eHnmSVurP8hIOarj4FwsiR7xc,1908
 dnastack/client/collections/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-dnastack/client/collections/client.py,sha256=ea7N7fDP5jdyPT3_gwd3WVm_wsGZ4ApTm6qdUr3X70k,15376
+dnastack/client/collections/client.py,sha256=5lWBuvewe9FZ5-jLnzHINcnhfO9QFCdEGHclP4mcstk,15832
 dnastack/client/collections/model.py,sha256=JO-eC_jc7hY9PBvST3x1vkmJE0LPDAbcUq5VBKcGyLM,3492
 dnastack/client/datasources/__init__.py,sha256=HxDIHuQX8KMWr3o70ucL3x79pXKaIHbBq7JqmyoRGxM,179
-dnastack/client/datasources/client.py,sha256=AfYxu18QRLh3tNe6uwS_Z00VwZCZNw7fUYMsEDDMe40,4734
+dnastack/client/datasources/client.py,sha256=v-qilRqu0glEdzyHxm64Sw_1khHje499LtzxfrXRqas,4766
 dnastack/client/datasources/model.py,sha256=dV9Sf05ivIq0ubwIIYK3kSv1xJ_TtjxvVp_ddI9aHEk,214
 dnastack/client/service_registry/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 dnastack/client/service_registry/client.py,sha256=r7D8CnPJLbNkc03g2PYHt880Ba1oPW2d8B0ShP0p4Eo,1131
@@ -129,7 +129,7 @@ dnastack/client/workbench/base_client.py,sha256=3Efiu-r8YZwExUQV2W1rkRVD-I-h4y51
 dnastack/client/workbench/models.py,sha256=RBo7wmWMSDkgiFZHaWh2ehKeTM8ERywug1bMGKDOm0k,446
 dnastack/client/workbench/ewes/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 dnastack/client/workbench/ewes/client.py,sha256=yIqjwyyY9q0NrxpTX6LrnlnjavHoa6Fo073O3Lokkaw,15637
-dnastack/client/workbench/ewes/models.py,sha256=LUhXKkmCZmxNkcaIdyiKdGWrdtTI51cRw4JZ7WZHF6A,8187
+dnastack/client/workbench/ewes/models.py,sha256=wnzthvBjzG_Zq1lyVJBTN5gWgT9gO1sZ0-Q91isy7FA,8214
 dnastack/client/workbench/samples/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 dnastack/client/workbench/samples/client.py,sha256=2X34SYTjV6n4yZz0q7Kaa4NPWDHRi2ut0uJWL3zXZWA,5901
 dnastack/client/workbench/samples/models.py,sha256=qGR--2b-Z71PlNXZt8Sg5LbrDNICFV54l3IWetwCTw8,1504
@@ -183,9 +183,9 @@ dnastack/http/authenticators/oauth2_adapter/client_credential.py,sha256=cCVZa4B1
 dnastack/http/authenticators/oauth2_adapter/device_code_flow.py,sha256=_OMHPf7qekPn_oSCBb41iYg9100sQMVzfJiKZHdh26w,6529
 dnastack/http/authenticators/oauth2_adapter/factory.py,sha256=r8K6swt5zhraP74KhTL2K4sQ71HWAMLM0oHg8qQT4BA,965
 dnastack/http/authenticators/oauth2_adapter/models.py,sha256=U11r8DZsWvjIRNCJE1mmQMuprZw3fpFwFBg7vmI5w48,660
-dnastack_client_library-3.1.120a0.dist-info/LICENSE,sha256=uwybO-wUbQhxkosgjhJlxmYATMy-AzoULFO9FUedE34,11580
-dnastack_client_library-3.1.120a0.dist-info/METADATA,sha256=6fbWkDqg_o_lE-mKC7oDKWMkqeqKlHl3s8dDDdsKBeU,968
-dnastack_client_library-3.1.120a0.dist-info/WHEEL,sha256=52BFRY2Up02UkjOa29eZOS2VxUrpPORXg1pkohGGUS8,91
-dnastack_client_library-3.1.120a0.dist-info/entry_points.txt,sha256=Y6OeicsiyGn3-8D-SiV4NiKlJgXfkSqK88kFBR6R1rY,89
-dnastack_client_library-3.1.120a0.dist-info/top_level.txt,sha256=P2RgRyqJ7hfNy1wLVRoVLJYEppUVkCX3syGK9zBqkt8,9
-dnastack_client_library-3.1.120a0.dist-info/RECORD,,
+dnastack_client_library-3.1.124.dist-info/licenses/LICENSE,sha256=uwybO-wUbQhxkosgjhJlxmYATMy-AzoULFO9FUedE34,11580
+dnastack_client_library-3.1.124.dist-info/METADATA,sha256=a59tF6ZpgSCU5doxUe4keDNLvCfojlvECIFiYNDIw4o,988
+dnastack_client_library-3.1.124.dist-info/WHEEL,sha256=SmOxYU7pzNKBqASvQJ7DjX3XGUF92lrGhMb3R6_iiqI,91
+dnastack_client_library-3.1.124.dist-info/entry_points.txt,sha256=Y6OeicsiyGn3-8D-SiV4NiKlJgXfkSqK88kFBR6R1rY,89
+dnastack_client_library-3.1.124.dist-info/top_level.txt,sha256=P2RgRyqJ7hfNy1wLVRoVLJYEppUVkCX3syGK9zBqkt8,9
+dnastack_client_library-3.1.124.dist-info/RECORD,,

{dnastack_client_library-3.1.120a0.dist-info → dnastack_client_library-3.1.124.dist-info}/WHEEL

@@ -1,5 +1,5 @@
 Wheel-Version: 1.0
-Generator: setuptools (76.0.0)
+Generator: setuptools (79.0.1)
 Root-Is-Purelib: true
 Tag: py3-none-any