dkist-processing-math 2.2.0rc1__py3-none-any.whl → 2.2.1__py3-none-any.whl

dkist_processing_math/__init__.py

@@ -1,9 +1,10 @@
 """init."""
-from pkg_resources import DistributionNotFound
-from pkg_resources import get_distribution
+
+from importlib.metadata import PackageNotFoundError
+from importlib.metadata import version
 
 try:
-    __version__ = get_distribution(__name__).version
-except DistributionNotFound:
+    __version__ = version(distribution_name=__name__)
+except PackageNotFoundError:
     # package is not installed
     __version__ = "unknown"

dkist_processing_math/arithmetic.py

@@ -1,4 +1,5 @@
 """Arithmetic."""
+
 from typing import Generator
 from typing import Iterable
 from typing import Union

dkist_processing_math/feature.py

@@ -1,4 +1,5 @@
 """Feature finding."""
+
 from typing import Callable
 from typing import Tuple
 

dkist_processing_math/linear_algebra.py

@@ -1,4 +1,5 @@
 """Linear algebra functions."""
+
 import numpy as np
 
 

dkist_processing_math/statistics.py

@@ -1,4 +1,5 @@
 """Statistics."""
+
 from typing import Iterable
 from typing import Union
 
@@ -65,7 +66,7 @@ def stddev_numpy_arrays(arrays: Iterable[np.ndarray]) -> np.ndarray:
     Parameters
     ----------
     arrays
-        The arrays to be to compute the standard deviation of
+        The arrays to be to compute the standard deviation of. Must be an Iterator of at least two arrays.
 
     Returns
     -------
@@ -82,16 +83,16 @@ def stddev_numpy_arrays(arrays: Iterable[np.ndarray]) -> np.ndarray:
     for array in arrays:
         count += 1
         try:
-            delta = array - running_mean
+            diff_from_prev_mean = array - running_mean
         except ValueError:
             raise ValueError(
                 f"All arrays must be the same shape. "
                 f"Shape of initial array = {running_mean.shape} "
                 f"Shape of current array = {array.shape}"
             )
-        running_mean += delta / count
-        delta2 = array - running_mean
-        running_M2 += delta * delta2
+        running_mean += diff_from_prev_mean / count
+        diff_from_current_mean = array - running_mean
+        running_M2 += diff_from_prev_mean * diff_from_current_mean
 
     match count:
         case 0:

dkist_processing_math/transform/__init__.py

@@ -1,4 +1,5 @@
 """init."""
+
 from .affine import affine_transform_arrays
 from .affine import rotate_arrays_about_point
 from .affine import rotation_matrix

dkist_processing_math/transform/affine.py

@@ -1,4 +1,5 @@
 """Affine transforms."""
+
 from functools import partial
 from typing import Iterable
 from typing import Iterator

dkist_processing_math/transform/binary.py

@@ -1,4 +1,5 @@
 """Functionality for binary images."""
+
 import numpy
 import numpy as np
 from skimage import filters as skif

dkist_processing_math/transform/binning.py

@@ -1,4 +1,5 @@
 """Binning transforms."""
+
 from functools import partial
 from typing import Iterable
 from typing import Iterator

dkist_processing_math/transform/hough.py

@@ -1,4 +1,5 @@
 """Hough transforms."""
+
 from typing import Tuple
 
 import numpy

{dkist_processing_math-2.2.0rc1.dist-info → dkist_processing_math-2.2.1.dist-info}/METADATA

@@ -1,6 +1,6 @@
-Metadata-Version: 2.2
+Metadata-Version: 2.4
 Name: dkist-processing-math
-Version: 2.2.0rc1
+Version: 2.2.1
 Summary: Common math functionality used in the DKIST calibrations suite
 Author-email: NSO / AURA <dkistdc@nso.edu>
 License: BSD-3-Clause
@@ -36,6 +36,8 @@ Requires-Dist: dkist-sphinx-theme; extra == "docs"
 dkist-processing-math
 =====================
 
+|codecov|
+
 dkist-processing-math contains the math functions used throughout the DKIST data processing software stack.
 
 
@@ -105,3 +107,6 @@ then the Bitbucket pipeline will fail. To be able to use the same tag you must d
     # Re-tag with the same version
     git tag vWHATEVER.THE.VERSION
     git push --tags origin main
+
+.. |codecov| image:: https://codecov.io/bb/dkistdc/dkist-processing-math/graph/badge.svg?token=N0SF93JM6R
+   :target: https://codecov.io/bb/dkistdc/dkist-processing-math

dkist_processing_math-2.2.1.dist-info/RECORD

@@ -0,0 +1,30 @@
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+dkist_processing_math-2.2.1.dist-info/RECORD,,

{dkist_processing_math-2.2.0rc1.dist-info → dkist_processing_math-2.2.1.dist-info}/WHEEL

@@ -1,5 +1,5 @@
 Wheel-Version: 1.0
-Generator: setuptools (75.8.0)
+Generator: setuptools (80.9.0)
 Root-Is-Purelib: true
 Tag: py3-none-any
 

docs/conf.py

@@ -1,4 +1,5 @@
 """Configuration file for the Sphinx documentation builder."""
+
 # -- stdlib imports ------------------------------------------------------------
 import importlib
 import sys

changelog/18.misc.rst

@@ -1 +0,0 @@
-Update bitbucket pipelines to use common scripts for checking for changelog snippets and verifying doc builds.

changelog/19.misc.rst

@@ -1 +0,0 @@
-Update Bitbucket pipelines to use execute script for standard steps.

changelog/20.feature.rst

@@ -1,2 +0,0 @@
-Add `stddev_numpy_arrays` function for computing the per-pixel standard deviation of an iterable of arrays.
-If a `generator` is provided this function is very memory-light, even for huge inputs.

dkist_processing_math-2.2.0rc1.dist-info/RECORD

@@ -1,33 +0,0 @@
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