dkist-processing-cryonirsp 1.4.20__py3-none-any.whl → 1.14.9rc1__py3-none-any.whl

dkist_processing_cryonirsp-1.14.9rc1.dist-info/METADATA

@@ -0,0 +1,552 @@
+Metadata-Version: 2.4
+Name: dkist-processing-cryonirsp
+Version: 1.14.9rc1
+Summary: Science processing code for the Cryo-NIRSP instrument on DKIST
+Author-email: NSO / AURA <dkistdc@nso.edu>
+License: BSD-3-Clause
+Project-URL: Homepage, https://nso.edu/dkist/data-center/
+Project-URL: Repository, https://bitbucket.org/dkistdc/dkist-processing-cryonirsp/
+Project-URL: Documentation, https://docs.dkist.nso.edu/projects/cryo-nirsp
+Project-URL: Help, https://nso.atlassian.net/servicedesk/customer/portal/5
+Classifier: Programming Language :: Python
+Classifier: Programming Language :: Python :: 3
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+
+dkist-processing-cryonirsp
+==========================
+
+|codecov|
+
+Overview
+--------
+The dkist-processing-cryonirsp library contains the implementation of the cryonirsp pipelines as a collection of the
+`dkist-processing-core <https://pypi.org/project/dkist-processing-core/>`_ framework and
+`dkist-processing-common <https://pypi.org/project/dkist-processing-common/>`_ Tasks.
+
+The recommended project structure is to separate tasks and workflows into separate packages.  Having the workflows
+in their own package facilitates using the build_utils to test the integrity of those workflows in the unit test.
+
+Environment Variables
+---------------------
+
+.. list-table::
+   :widths: 10 90
+   :header-rows: 1
+
+   * - Variable
+     - Field Info
+   * - LOGURU_LEVEL
+     - annotation=str required=False default='INFO' alias_priority=2 validation_alias='LOGURU_LEVEL' description='Log level for the application'
+   * - MESH_CONFIG
+     - annotation=dict[str, MeshService] required=False default_factory=dict alias_priority=2 validation_alias='MESH_CONFIG' description='Service mesh configuration' examples=[{'upstream_service_name': {'mesh_address': 'localhost', 'mesh_port': 6742}}]
+   * - RETRY_CONFIG
+     - annotation=RetryConfig required=False default_factory=RetryConfig description='Retry configuration for the service'
+   * - OTEL_SERVICE_NAME
+     - annotation=str required=False default='unknown-service-name' alias_priority=2 validation_alias='OTEL_SERVICE_NAME' description='Service name for OpenTelemetry'
+   * - DKIST_SERVICE_VERSION
+     - annotation=str required=False default='unknown-service-version' alias_priority=2 validation_alias='DKIST_SERVICE_VERSION' description='Service version for OpenTelemetry'
+   * - NOMAD_ALLOC_ID
+     - annotation=str required=False default='unknown-allocation-id' alias_priority=2 validation_alias='NOMAD_ALLOC_ID' description='Nomad allocation ID for OpenTelemetry'
+   * - NOMAD_ALLOC_NAME
+     - annotation=str required=False default='unknown-allocation-name' alias='NOMAD_ALLOC_NAME' alias_priority=2 description='Allocation name for the deployed container the task is running on.'
+   * - NOMAD_GROUP_NAME
+     - annotation=str required=False default='unknown-allocation-group' alias='NOMAD_GROUP_NAME' alias_priority=2 description='Allocation group for the deployed container the task is running on'
+   * - OTEL_EXPORTER_OTLP_TRACES_INSECURE
+     - annotation=bool required=False default=True description='Use insecure connection for OTLP traces'
+   * - OTEL_EXPORTER_OTLP_METRICS_INSECURE
+     - annotation=bool required=False default=True description='Use insecure connection for OTLP metrics'
+   * - OTEL_EXPORTER_OTLP_TRACES_ENDPOINT
+     - annotation=Union[str, NoneType] required=False default=None description='OTLP traces endpoint. Overrides mesh configuration' examples=['localhost:4317']
+   * - OTEL_EXPORTER_OTLP_METRICS_ENDPOINT
+     - annotation=Union[str, NoneType] required=False default=None description='OTLP metrics endpoint. Overrides mesh configuration' examples=['localhost:4317']
+   * - OTEL_PYTHON_DISABLED_INSTRUMENTATIONS
+     - annotation=list[str] required=False default_factory=list description='List of instrumentations to disable. https://opentelemetry.io/docs/zero-code/python/configuration/' examples=[['pika', 'requests']]
+   * - OTEL_PYTHON_FASTAPI_EXCLUDED_URLS
+     - annotation=str required=False default='health' description='Comma separated list of URLs to exclude from OpenTelemetry instrumentation in FastAPI.' examples=['client/.*/info,healthcheck']
+   * - SYSTEM_METRIC_INSTRUMENTATION_CONFIG
+     - annotation=Union[dict[str, bool], NoneType] required=False default=None description='Configuration for system metric instrumentation. https://opentelemetry-python-contrib.readthedocs.io/en/latest/instrumentation/system_metrics/system_metrics.html' examples=[{'system.memory.usage': ['used', 'free', 'cached'], 'system.cpu.time': ['idle', 'user', 'system', 'irq'], 'system.network.io': ['transmit', 'receive'], 'process.runtime.memory': ['rss', 'vms'], 'process.runtime.cpu.time': ['user', 'system'], 'process.runtime.context_switches': ['involuntary', 'voluntary']}]
+   * - ISB_USERNAME
+     - annotation=str required=False default='guest' description='Username for the interservice-bus.'
+   * - ISB_PASSWORD
+     - annotation=str required=False default='guest' description='Password for the interservice-bus.'
+   * - ISB_EXCHANGE
+     - annotation=str required=False default='master.direct.x' description='Exchange for the interservice-bus.'
+   * - ISB_QUEUE_TYPE
+     - annotation=str required=False default='classic' description='Queue type for the interservice-bus.' examples=['quorum', 'classic']
+   * - BUILD_VERSION
+     - annotation=str required=False default='dev' description='Fallback build version for workflow tasks.'
+   * - GQL_AUTH_TOKEN
+     - annotation=Union[str, NoneType] required=False default='dev' description='The auth token for the metadata-store-api.'
+   * - OBJECT_STORE_ACCESS_KEY
+     - annotation=Union[str, NoneType] required=False default=None description='The access key for the object store.'
+   * - OBJECT_STORE_SECRET_KEY
+     - annotation=Union[str, NoneType] required=False default=None description='The secret key for the object store.'
+   * - OBJECT_STORE_USE_SSL
+     - annotation=bool required=False default=False description='Whether to use SSL for the object store connection.'
+   * - MULTIPART_THRESHOLD
+     - annotation=Union[int, NoneType] required=False default=None description='Multipart threshold for the object store.'
+   * - S3_CLIENT_CONFIG
+     - annotation=Union[dict, NoneType] required=False default=None description='S3 client configuration for the object store.'
+   * - S3_UPLOAD_CONFIG
+     - annotation=Union[dict, NoneType] required=False default=None description='S3 upload configuration for the object store.'
+   * - S3_DOWNLOAD_CONFIG
+     - annotation=Union[dict, NoneType] required=False default=None description='S3 download configuration for the object store.'
+   * - GLOBUS_MAX_RETRIES
+     - annotation=int required=False default=5 description='Max retries for transient errors on calls to the globus api.'
+   * - GLOBUS_INBOUND_CLIENT_CREDENTIALS
+     - annotation=list[GlobusClientCredential] required=False default_factory=list description='Globus client credentials for inbound transfers.' examples=[[{'client_id': 'id1', 'client_secret': 'secret1'}, {'client_id': 'id2', 'client_secret': 'secret2'}]]
+   * - GLOBUS_OUTBOUND_CLIENT_CREDENTIALS
+     - annotation=list[GlobusClientCredential] required=False default_factory=list description='Globus client credentials for outbound transfers.' examples=[[{'client_id': 'id3', 'client_secret': 'secret3'}, {'client_id': 'id4', 'client_secret': 'secret4'}]]
+   * - OBJECT_STORE_ENDPOINT
+     - annotation=Union[str, NoneType] required=False default=None description='Object store Globus Endpoint ID.'
+   * - SCRATCH_ENDPOINT
+     - annotation=Union[str, NoneType] required=False default=None description='Scratch Globus Endpoint ID.'
+   * - SCRATCH_BASE_PATH
+     - annotation=str required=False default='scratch/' description='Base path for scratch storage.'
+   * - SCRATCH_INVENTORY_DB_COUNT
+     - annotation=int required=False default=16 description='Number of databases in the scratch inventory (redis).'
+   * - DOCS_BASE_URL
+     - annotation=str required=False default='my_test_url' description='Base URL for the documentation site.'
+   * - FTS_ATLAS_DATA_DIR
+     - annotation=Union[str, NoneType] required=False default=None description='Common cached directory for a downloaded FTS Atlas.'
+
+Development
+-----------
+.. code-block:: bash
+
+    git clone git@bitbucket.org:dkistdc/dkist-processing-cryonirsp.git
+    cd dkist-processing-cryonirsp
+    pre-commit install
+    pip install -e .[test]
+    pytest -v --cov dkist_processing_cryonirsp
+
+Build
+-----
+Artifacts are built through Bitbucket Pipelines.
+
+The pipeline can be used in other repos with a modification of the package and artifact locations
+to use the names relevant to the target repo.
+
+e.g. dkist-processing-test -> dkist-processing-vbi and dkist_processing_test -> dkist_processing_vbi
+
+Deployment
+----------
+Deployment is done with `turtlebot <https://bitbucket.org/dkistdc/turtlebot/src/main/>`_ and follows
+the process detailed in `dkist-processing-core <https://pypi.org/project/dkist-processing-core/>`_
+
+Additionally, when a new release is ready to be built the following steps need to be taken:
+
+1. Freezing Dependencies
+#########################
+
+A new "frozen" extra is generated by the `dkist-dev-tools <https://bitbucket.org/dkistdc/dkist-dev-tools/src/main/>`_
+package. If you don't have `dkist-dev-tools` installed please follow the directions from that repo.
+
+To freeze dependencies run
+
+.. code-block:: bash
+
+    ddt freeze vX.Y.Z[rcK]
+
+Where "vX.Y.Z[rcK]" is the version about to be released.
+
+2. Changelog
+############
+
+When you make **any** change to this repository it **MUST** be accompanied by a changelog file.
+The changelog for this repository uses the `towncrier <https://github.com/twisted/towncrier>`__ package.
+Entries in the changelog for the next release are added as individual files (one per change) to the ``changelog/`` directory.
+
+Writing a Changelog Entry
+^^^^^^^^^^^^^^^^^^^^^^^^^
+
+A changelog entry accompanying a change should be added to the ``changelog/`` directory.
+The name of a file in this directory follows a specific template::
+
+  <PULL REQUEST NUMBER>.<TYPE>[.<COUNTER>].rst
+
+The fields have the following meanings:
+
+* ``<PULL REQUEST NUMBER>``: This is the number of the pull request, so people can jump from the changelog entry to the diff on BitBucket.
+* ``<TYPE>``: This is the type of the change and must be one of the values described below.
+* ``<COUNTER>``: This is an optional field, if you make more than one change of the same type you can append a counter to the subsequent changes, i.e. ``100.bugfix.rst`` and ``100.bugfix.1.rst`` for two bugfix changes in the same PR.
+
+The list of possible types is defined in the towncrier section of ``pyproject.toml``, the types are:
+
+* ``feature``: This change is a new code feature.
+* ``bugfix``: This is a change which fixes a bug.
+* ``doc``: A documentation change.
+* ``removal``: A deprecation or removal of public API.
+* ``misc``: Any small change which doesn't fit anywhere else, such as a change to the package infrastructure.
+
+
+Rendering the Changelog at Release Time
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+
+When you are about to tag a release first you must run ``towncrier`` to render the changelog.
+The steps for this are as follows:
+
+* Run `towncrier build --version vx.y.z` using the version number you want to tag.
+* Agree to have towncrier remove the fragments.
+* Add and commit your changes.
+* Tag the release.
+
+**NOTE:** If you forget to add a Changelog entry to a tagged release (either manually or automatically with ``towncrier``)
+then the Bitbucket pipeline will fail. To be able to use the same tag you must delete it locally and on the remote branch:
+
+.. code-block:: bash
+
+    # First, actually update the CHANGELOG and commit the update
+    git commit
+
+    # Delete tags
+    git tag -d vWHATEVER.THE.VERSION
+    git push --delete origin vWHATEVER.THE.VERSION
+
+    # Re-tag with the same version
+    git tag vWHATEVER.THE.VERSION
+    git push --tags origin main
+
+Science Changelog
+^^^^^^^^^^^^^^^^^
+
+Whenever a release involves changes to the scientific quality of L1 data, additional changelog fragment(s) should be
+created. These fragments are intended to be as verbose as is needed to accurately capture the scope of the change(s),
+so feel free to use all the fancy RST you want. Science fragments are placed in the same ``changelog/`` directory
+as other fragments, but are always called::
+
+  <PR NUMBER | +>.science[.<COUNTER>].rst
+
+In the case that a single pull request encapsulates the entirety of the scientific change then the first field should
+be that PR number (same as the normal CHANGELOG). If, however, there is not a simple mapping from a single PR to a scientific
+change then use the character "+" instead; this will create a changelog entry with no associated PR. For example:
+
+.. code-block:: bash
+
+  $ ls changelog/
+  99.bugfix.rst    # This is a normal changelog fragment associated with a bugfix in PR 99
+  99.science.rst   # Apparently that bugfix also changed the scientific results, so that PR also gets a science fragment
+  +.science.rst    # This fragment is not associated with a PR
+
+
+When it comes time to build the SCIENCE_CHANGELOG, use the ``science_towncrier.sh`` script in this repo to do so.
+This script accepts all the same arguments as the default `towncrier`. For example:
+
+.. code-block:: bash
+
+  ./science_towncrier.sh build --version vx.y.z
+
+This will update the SCIENCE_CHANGELOG and remove any science fragments from the changelog directory.
+
+3. Tag and Push
+###############
+
+Once all commits are in place add a git tag that will define the released version, then push the tags up to Bitbucket:
+
+.. code-block:: bash
+
+    git tag vX.Y.Z[rcK]
+    git push --tags origin BRANCH
+
+In the case of an rc, BRANCH will likely be your development branch. For full releases BRANCH should be "main".
+
+.. |codecov| image:: https://codecov.io/bb/dkistdc/dkist-processing-cryonirsp/graph/badge.svg?token=TZBK64UKG5
+   :target: https://codecov.io/bb/dkistdc/dkist-processing-cryonirsp