deeplotx 0.9.8a0__py3-none-any.whl → 0.9.10__py3-none-any.whl

deeplotx/__init__.py

@@ -21,7 +21,6 @@ from .nn import (
     AutoRegression,
     LongContextAutoRegression
 )
-from .trainer import TextBinaryClassifierTrainer
 
 __AUTHOR__ = '吴子豪 / Vortez Wohl'
 __EMAIL__ = 'vortez.wohl@gmail.com'

deeplotx/ner/bert_ner.py

@@ -43,12 +43,15 @@ class BertNER(BaseNER):
 
     def _fast_extract(self, s: str, with_gender: bool = True, prob_threshold: float = .0) -> list[NamedEntity]:
         assert prob_threshold <= 1., f'prob_threshold ({prob_threshold}) cannot be larger than 1.'
+        # entity length cannot be longer than the whole seq
+        __max_search_backward = len(self.tokenizer.encode(s, add_special_tokens=False))
         s = f' {s.replace(NEW_LINE, BLANK * 2)} '
         raw_entities = self._ner_pipeline(s)
         entities = []
         for ent in raw_entities:
             entities.append([s[ent['start']: ent['end']], ent['entity'], ent['score'].item()])
-        while True:
+        __search_backward = -2
+        while __search_backward < __max_search_backward:
             for i, ent in enumerate(entities):
                 if len(ent[0].strip()) < 1:
                     del entities[i]
@@ -65,6 +68,11 @@ class BertNER(BaseNER):
                     _continue = True
             if not _continue:
                 break
+            __search_backward += 1
+        # adjust all I-ENTs
+        for ent in entities:
+            if ent[1].upper().startswith('I'):
+                ent[1] = f'B{ent[1][1:]}'
         for ent in entities:
             ent[0] = ent[0].strip()
             if len(ent[0]) < 1:

deeplotx/ner/n2g/__init__.py

@@ -13,13 +13,12 @@ from deeplotx.nn.base_neural_network import BaseNeuralNetwork
 
 __CACHE_DIR__ = os.path.join(__ROOT__, '.cache', '.n2g')
 ENCODER = Encoder(model_name_or_path='FacebookAI/xlm-roberta-base')
-BASE_MODEL = 'name2gender-base'
-SMALL_MODEL = 'name2gender-small'
+DEFAULT_MODEL = 'name2gender-small'
 _MIN_FILE_SIZE = 1024 * 5
 
 
 def download_model(model_name: str):
-    quiet = bool(os.getenv('QUIET_DOWNLOAD', False))
+    quiet = bool(os.getenv('N2G_QUIET_DOWNLOAD', False))
     os.makedirs(__CACHE_DIR__, exist_ok=True)
     _proxies = {
         'http': os.getenv('HTTP_PROXY', os.getenv('http_proxy')),
@@ -51,25 +50,20 @@ def download_model(model_name: str):
 
 def load_model(model_name: str = 'name2gender-small', dtype: torch.dtype | None = torch.float16) -> BaseNeuralNetwork:
     n2g_model = None
-    match model_name:
-        case 'name2gender-base' | 'n2g-base' | 'base':
-            download_model(BASE_MODEL)
-            n2g_model = LogisticRegression(input_dim=768, output_dim=1,
-                                           num_heads=12, num_layers=4,
-                                           head_layers=1, expansion_factor=2,
-                                           model_name=BASE_MODEL, dtype=dtype)
-        case 'name2gender-small' | 'n2g-base' | 'small':
-            download_model(SMALL_MODEL)
-            n2g_model = LogisticRegression(input_dim=768, output_dim=1,
-                                           num_heads=6, num_layers=2,
-                                           head_layers=1, expansion_factor=1.5,
-                                           model_name=SMALL_MODEL, dtype=dtype)
-        case _:
-            download_model(SMALL_MODEL)
-            n2g_model = LogisticRegression(input_dim=768, output_dim=1,
-                                           num_heads=6, num_layers=2,
-                                           head_layers=1, expansion_factor=1.5,
-                                           model_name=SMALL_MODEL, dtype=dtype)
+    if 'base' in model_name.lower():
+        download_model(model_name)
+        n2g_model = LogisticRegression(input_dim=768, output_dim=1,
+                                       num_heads=12, num_layers=4,
+                                       head_layers=1, expansion_factor=2,
+                                       model_name=model_name, dtype=dtype)
+    elif 'small' in model_name.lower():
+        download_model(model_name)
+        n2g_model = LogisticRegression(input_dim=768, output_dim=1,
+                                       num_heads=6, num_layers=2,
+                                       head_layers=1, expansion_factor=1.5,
+                                       model_name=model_name, dtype=dtype)
+    else:
+        raise FileNotFoundError(f"Model \"{model_name}\" doesn't exists.")
     return n2g_model.load(model_dir=__CACHE_DIR__)
 
 
@@ -77,7 +71,7 @@ class Name2Gender:
     def __init__(self, model: BaseNeuralNetwork | None = None):
         super().__init__()
         if model is None:
-            model = load_model(SMALL_MODEL)
+            model = load_model(DEFAULT_MODEL)
         self._model = model
 
     def __call__(self, name: str, return_probability: bool = False, threshold: float = .5) -> tuple[Gender, float] | Gender:

deeplotx/util/__init__.py

@@ -1,2 +1,2 @@
 from .hash import md5, sha1, sha256, sha512
-from .read_file import read_file, get_files
+from .read_file import read_file, write_file, get_files

{deeplotx-0.9.8a0.dist-info → deeplotx-0.9.10.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: deeplotx
-Version: 0.9.8a0
+Version: 0.9.10
 Summary: An out-of-the-box long-text NLP framework.
 Requires-Python: >=3.10
 Description-Content-Type: text/markdown

{deeplotx-0.9.8a0.dist-info → deeplotx-0.9.10.dist-info}/RECORD

@@ -1,13 +1,13 @@
-deeplotx/__init__.py,sha256=x4CbJuW20al6S5KkKyrReeuwNGv04JGoqtGUyx-ACtg,1356
+deeplotx/__init__.py,sha256=0OWLsgXlStzwm0m9ScaoZvBnsx3a0xTmlzYBUgarl-g,1306
 deeplotx/encoder/__init__.py,sha256=BrsF5_4O-4pfihYF2wjExDOoAY-03kGJTH-Mhez4tsE,129
 deeplotx/encoder/encoder.py,sha256=uJswUSrYVDWP84HeCD40R9KgXGPUEa080konv7jEp8I,3539
 deeplotx/encoder/long_text_encoder.py,sha256=4oRa9FqfGNZ8-gq14UKuhDkZC0A1Xi-wKmbQsn-uZ58,3966
 deeplotx/encoder/longformer_encoder.py,sha256=mfAI_NE3QQZhvGHbZkP7S6g0Jj59wmLWQ9QW7HOjqm0,2876
 deeplotx/ner/__init__.py,sha256=Rss1pup9HzHZCG8U9ub8niWa9zRjWCy3Z7zg378KZQg,114
 deeplotx/ner/base_ner.py,sha256=pZTl50OrHH_FJm4rKp9iuixeOE6FX_AzgDXD32aXsN0,204
-deeplotx/ner/bert_ner.py,sha256=6al5iMc8gb3XuJf7dbJd-noXShLYmRoLXTd8L1-wYMM,8581
+deeplotx/ner/bert_ner.py,sha256=tfbM3CQBEpZsD0KYVA7GVNJax-7kzNOQgwlpo2S8h-c,8986
 deeplotx/ner/named_entity.py,sha256=c6XufIwH6yloJ-ccUjagf4mBl1XbbYDT8xyEJJ_-ZNs,269
-deeplotx/ner/n2g/__init__.py,sha256=b6fOWJVLaOCtoz8Qlp8NWQbL5lUSbn6H3-8fnVNIPi0,3940
+deeplotx/ner/n2g/__init__.py,sha256=L1IJ8W1nApzqHx2u7JMtPCLfABm5qKJvh_bHMWdvdLY,3538
 deeplotx/nn/__init__.py,sha256=YILwbxb-NHdiJjfOwBKH8F7PuZSDZSrGpTznPDucTro,710
 deeplotx/nn/attention.py,sha256=R-i-Rd7gnsh6hwXDeYfqLQOJvfSZIGfQbFzRlC91XLo,2879
 deeplotx/nn/auto_regression.py,sha256=j_R7WGPq9REngjpLuX5c0AaNqOpgGm2Vfrolw-XjWXw,877
@@ -27,14 +27,11 @@ deeplotx/similarity/__init__.py,sha256=s3u-KSgxjnMcWpIItKgXNltFMPQ7YY3CqsqHI-5F1
 deeplotx/similarity/distribution.py,sha256=wQGouuuW531pZeBRKBujXsdsoz4fDnPw7_GW81jwepc,1066
 deeplotx/similarity/set.py,sha256=zhGFxtSIXlWqvipBYzoiPahp4g0boAIoUiMfG0wl07A,686
 deeplotx/similarity/vector.py,sha256=WVbDHqykt-fvuILVrhUCtIFAOEjY_zvttrXGM9eylG0,1125
-deeplotx/trainer/__init__.py,sha256=Fl5DR9UecQc5VtBcczU9sx_HtPNoFohpuELOh-Jrsks,77
-deeplotx/trainer/base_trainer.py,sha256=z0MeAT-rRYmjeBXt0ckt7J1itYArR0Cx02wHesXUoZE,385
-deeplotx/trainer/text_binary_classification_trainer.py,sha256=TFxOX8rWU_zKliI9zm7F5ZH7snR2d-sk95s3pfTmm78,6601
-deeplotx/util/__init__.py,sha256=5CH4MTeSgsmCe3LPMfvKoSBpwh6jDSBuHVElJvzQzgs,90
+deeplotx/util/__init__.py,sha256=ppQwp3A4rhAWBQ7DEobIYxloIiythxxUswCn-7UrMeA,102
 deeplotx/util/hash.py,sha256=qbNU3RLBWGQYFVte9WZBAkZ1BkdjCXiKLDaKPN54KFk,662
 deeplotx/util/read_file.py,sha256=O9nieNgAGQ7Ct1EFxCdcgL6hVs5s2Vw_ItcUK6VeTwY,981
-deeplotx-0.9.8a0.dist-info/licenses/LICENSE,sha256=IwGE9guuL-ryRPEKi6wFPI_zOhg7zDZbTYuHbSt_SAk,35823
-deeplotx-0.9.8a0.dist-info/METADATA,sha256=vOJDioxttz0XCz58mflhMB5PbBKdRCy2R4pP7ZjefW0,14444
-deeplotx-0.9.8a0.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
-deeplotx-0.9.8a0.dist-info/top_level.txt,sha256=hKg4pVDXZ-WWxkRfJFczRIll1Sv7VyfKCmzHLXbuh1U,9
-deeplotx-0.9.8a0.dist-info/RECORD,,
+deeplotx-0.9.10.dist-info/licenses/LICENSE,sha256=IwGE9guuL-ryRPEKi6wFPI_zOhg7zDZbTYuHbSt_SAk,35823
+deeplotx-0.9.10.dist-info/METADATA,sha256=6m2igF02QAdr5xns8BamtyMfrgLwBsuej2jihR36dCE,14443
+deeplotx-0.9.10.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
+deeplotx-0.9.10.dist-info/top_level.txt,sha256=hKg4pVDXZ-WWxkRfJFczRIll1Sv7VyfKCmzHLXbuh1U,9
+deeplotx-0.9.10.dist-info/RECORD,,

deeplotx/trainer/__init__.py

@@ -1 +0,0 @@
-from .text_binary_classification_trainer import TextBinaryClassifierTrainer

deeplotx/trainer/base_trainer.py

@@ -1,13 +0,0 @@
-from abc import abstractmethod
-
-from deeplotx.nn.base_neural_network import BaseNeuralNetwork
-
-
-class BaseTrainer(object):
-    def __init__(self, batch_size: int, train_ratio: float):
-        self._batch_size = batch_size
-        self._train_ratio = train_ratio
-        self.model = None
-
-    @abstractmethod
-    def train(self, *args, **kwargs) -> BaseNeuralNetwork: ...

deeplotx/trainer/text_binary_classification_trainer.py

@@ -1,103 +0,0 @@
-import logging
-from typing_extensions import override
-
-import torch
-from torch import nn, optim
-from torch.utils.data import DataLoader, TensorDataset
-
-from deeplotx.encoder.long_text_encoder import LongTextEncoder
-from deeplotx.nn.attention import DEFAULT_THETA
-from deeplotx.nn.long_context_recursive_sequential import LongContextRecursiveSequential
-from deeplotx.trainer.base_trainer import BaseTrainer
-
-logger = logging.getLogger('deeplotx.trainer')
-
-
-class TextBinaryClassifierTrainer(BaseTrainer):
-    def __init__(self, long_text_encoder: LongTextEncoder, batch_size: int = 2, train_ratio: float = 0.8):
-        super().__init__(batch_size=batch_size, train_ratio=train_ratio)
-        self._long_text_encoder = long_text_encoder
-        self.device = self._long_text_encoder.device
-        self.train_dataset_loader = None
-        self.valid_dataset_loader = None
-
-    @override
-    def train(self, positive_texts: list[str], negative_texts: list[str],
-              num_epochs: int, learning_rate: float = 2e-6, balancing_dataset: bool = True,
-              train_loss_threshold: float = 0.0, valid_loss_threshold: float = 0.0,
-              alpha: float = 1e-4, rho: float = 0.2, encoder_layers: int = 4, attn_heads: int = 6,
-              recursive_layers: int = 2, recursive_hidden_dim: int = 256, **kwargs) -> LongContextRecursiveSequential:
-        if balancing_dataset:
-            min_length = min(len(positive_texts), len(negative_texts))
-            positive_texts = positive_texts[:min_length]
-            negative_texts = negative_texts[:min_length]
-        all_texts = positive_texts + negative_texts
-        text_embeddings = [self._long_text_encoder.encode(x, flatten=False) for x in all_texts]
-        feature_dim = text_embeddings[0].shape[-1]
-        dtype = text_embeddings[0].dtype
-        labels = ([torch.tensor([1.], dtype=dtype, device=self.device) for _ in range(len(positive_texts))]
-                  + [torch.tensor([.0], dtype=dtype, device=self.device) for _ in range(len(negative_texts))])
-        inputs = torch.stack(text_embeddings).to(self.device)
-        labels = torch.stack(labels).to(self.device)
-        dataset_size = len(labels)
-        train_size = int(self._train_ratio * dataset_size)
-        train_dataset = TensorDataset(inputs[:train_size], labels[:train_size])
-        valid_dataset = TensorDataset(inputs[train_size:], labels[train_size:])
-        self.train_dataset_loader = DataLoader(train_dataset, batch_size=self._batch_size, shuffle=True)
-        self.valid_dataset_loader = DataLoader(valid_dataset, batch_size=self._batch_size, shuffle=True)
-        if self.model is not None and self.model.in_features != feature_dim:
-            logger.warning("The dimension of features doesn't match. A new model instance will be created.")
-            self.model = None
-        if self.model is None:
-            ffn_heads = kwargs.get('ffn_heads', 2)
-            ffn_layers = kwargs.get('ffn_layers', 5)
-            ffn_expansion_factor = kwargs.get('ffn_expansion_factor', 2)
-            bias = kwargs.get('bias', True)
-            dropout_rate = kwargs.get('dropout_rate', 0.1)
-            encoder_ffn_layers = kwargs.get('encoder_ffn_layers', ffn_layers)
-            encoder_expansion_factor = kwargs.get('encoder_expansion_factor', ffn_expansion_factor)
-            encoder_dropout_rate = kwargs.get('encoder_dropout_rate', dropout_rate)
-            attn_ffn_layers = kwargs.get('attn_ffn_layers', 1)
-            attn_expansion_factor = kwargs.get('attn_expansion_factor', ffn_expansion_factor)
-            attn_dropout_rate = kwargs.get('attn_dropout_rate', dropout_rate)
-            theta = kwargs.get('theta', DEFAULT_THETA)
-            self.model = LongContextRecursiveSequential(input_dim=feature_dim, output_dim=1, bias=bias,
-                                                        encoder_layers=encoder_layers, attn_heads=attn_heads,
-                                                        recursive_layers=recursive_layers, recursive_hidden_dim=recursive_hidden_dim,
-                                                        ffn_layers=ffn_layers, ffn_heads=ffn_heads, ffn_expansion_factor=ffn_expansion_factor,
-                                                        dropout_rate=dropout_rate, encoder_ffn_layers=encoder_ffn_layers,
-                                                        encoder_expansion_factor=encoder_expansion_factor, encoder_dropout_rate=encoder_dropout_rate,
-                                                        attn_ffn_layers=attn_ffn_layers, attn_expansion_factor=attn_expansion_factor,
-                                                        attn_dropout_rate=attn_dropout_rate, theta=theta).initialize_weights()
-        logger.debug(f'Training Model: \n{self.model}')
-        loss_function = nn.BCELoss()
-        optimizer = optim.Adamax(self.model.parameters(), lr=learning_rate)
-        for epoch in range(num_epochs):
-            self.model.train()
-            total_loss = 0.0
-            for batch_texts, batch_labels in self.train_dataset_loader:
-                outputs = torch.sigmoid(self.model.forward(batch_texts, self.model.initial_state(batch_texts.shape[0]))[0])
-                loss = loss_function(outputs, batch_labels) + self.model.elastic_net(alpha=alpha, rho=rho)
-                optimizer.zero_grad()
-                loss.backward()
-                optimizer.step()
-                total_loss += loss.item()
-            if epoch % 3 == 0:
-                total_valid_loss = 0.0
-                for batch_texts, batch_labels in self.valid_dataset_loader:
-                    with torch.no_grad():
-                        self.model.eval()
-                        outputs = torch.sigmoid(self.model.forward(batch_texts, self.model.initial_state(batch_texts.shape[0]))[0])
-                        loss = loss_function(outputs, batch_labels) + self.model.elastic_net(alpha=alpha, rho=rho)
-                        total_valid_loss += loss.item()
-                        self.model.train()
-                logger.debug(f"Epoch {epoch + 1}/{num_epochs} | "
-                             f"Train Loss: {total_loss:.4f} | "
-                             f"Valid Loss: {total_valid_loss:.4f}")
-                if total_valid_loss < valid_loss_threshold:
-                    break
-            else:
-                logger.debug(f"Epoch {epoch + 1}/{num_epochs} | Train Loss: {total_loss:.4f}")
-            if total_loss < train_loss_threshold:
-                break
-        return self.model