deepcode-hku 1.0.1__py3-none-any.whl

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Files changed (44) hide show
  1. cli/__init__.py +18 -0
  2. cli/cli_app.py +296 -0
  3. cli/cli_interface.py +744 -0
  4. cli/cli_launcher.py +155 -0
  5. cli/main_cli.py +243 -0
  6. cli/workflows/__init__.py +11 -0
  7. cli/workflows/cli_workflow_adapter.py +336 -0
  8. deepcode.py +219 -0
  9. deepcode_hku-1.0.1.dist-info/METADATA +695 -0
  10. deepcode_hku-1.0.1.dist-info/RECORD +44 -0
  11. deepcode_hku-1.0.1.dist-info/WHEEL +5 -0
  12. deepcode_hku-1.0.1.dist-info/entry_points.txt +2 -0
  13. deepcode_hku-1.0.1.dist-info/licenses/LICENSE +21 -0
  14. deepcode_hku-1.0.1.dist-info/top_level.txt +6 -0
  15. tools/__init__.py +0 -0
  16. tools/code_implementation_server.py +1045 -0
  17. tools/code_indexer.py +1657 -0
  18. tools/code_reference_indexer.py +486 -0
  19. tools/command_executor.py +324 -0
  20. tools/git_command.py +356 -0
  21. tools/pdf_converter.py +640 -0
  22. tools/pdf_downloader.py +1370 -0
  23. tools/pdf_utils.py +52 -0
  24. ui/__init__.py +43 -0
  25. ui/app.py +13 -0
  26. ui/components.py +1450 -0
  27. ui/handlers.py +773 -0
  28. ui/layout.py +106 -0
  29. ui/streamlit_app.py +38 -0
  30. ui/styles.py +2116 -0
  31. utils/__init__.py +17 -0
  32. utils/cli_interface.py +459 -0
  33. utils/dialogue_logger.py +671 -0
  34. utils/file_processor.py +426 -0
  35. utils/simple_llm_logger.py +198 -0
  36. workflows/__init__.py +31 -0
  37. workflows/agent_orchestration_engine.py +1371 -0
  38. workflows/agents/__init__.py +13 -0
  39. workflows/agents/code_implementation_agent.py +1093 -0
  40. workflows/agents/memory_agent_concise.py +923 -0
  41. workflows/agents/memory_agent_concise_index.py +935 -0
  42. workflows/code_implementation_workflow.py +924 -0
  43. workflows/code_implementation_workflow_index.py +931 -0
  44. workflows/codebase_index_workflow.py +726 -0
@@ -0,0 +1,486 @@
1
+ #!/usr/bin/env python3
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+ """
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+ Code Reference Indexer MCP Tool - Unified Version
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+
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+ Specialized MCP tool for searching relevant index content in indexes folder
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+ and formatting it for LLM code implementation reference.
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+
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+ Core Features:
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+ 1. **UNIFIED TOOL**: Combined search_code_references that handles directory setup, loading, and searching in one call
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+ 2. Match relevant reference code based on target file path and functionality requirements
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+ 3. Format output of relevant code examples, functions and concepts
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+ 4. Provide structured reference information for LLM use
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+
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+ Key Improvement:
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+ - Single tool call that handles all steps internally
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+ - Agent only needs to provide indexes_path and target_file
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+ - No dependency on calling order or global state management
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+ """
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+
20
+ import json
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+ from pathlib import Path
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+ from typing import Dict, List, Tuple
23
+ from dataclasses import dataclass
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+ import logging
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+
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+ # Import MCP modules
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+ from mcp.server.fastmcp import FastMCP
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+
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+ # Setup logging
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+ logging.basicConfig(level=logging.INFO)
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+ logger = logging.getLogger(__name__)
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+
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+ # Create FastMCP server instance
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+ mcp = FastMCP("code-reference-indexer")
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+
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+
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+ @dataclass
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+ class CodeReference:
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+ """Code reference information structure"""
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+
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+ file_path: str
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+ file_type: str
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+ main_functions: List[str]
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+ key_concepts: List[str]
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+ dependencies: List[str]
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+ summary: str
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+ lines_of_code: int
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+ repo_name: str
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+ confidence_score: float = 0.0
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+
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+
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+ @dataclass
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+ class RelationshipInfo:
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+ """Relationship information structure"""
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+
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+ repo_file_path: str
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+ target_file_path: str
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+ relationship_type: str
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+ confidence_score: float
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+ helpful_aspects: List[str]
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+ potential_contributions: List[str]
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+ usage_suggestions: str
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+
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+
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+ def load_index_files_from_directory(indexes_directory: str) -> Dict[str, Dict]:
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+ """Load all index files from specified directory"""
67
+ indexes_path = Path(indexes_directory).resolve()
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+
69
+ if not indexes_path.exists():
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+ logger.warning(f"Indexes directory does not exist: {indexes_path}")
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+ return {}
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+
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+ index_cache = {}
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+
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+ for index_file in indexes_path.glob("*.json"):
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+ try:
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+ with open(index_file, "r", encoding="utf-8") as f:
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+ index_data = json.load(f)
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+ index_cache[index_file.stem] = index_data
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+ logger.info(f"Loaded index file: {index_file.name}")
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+ except Exception as e:
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+ logger.error(f"Failed to load index file {index_file.name}: {e}")
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+
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+ logger.info(f"Loaded {len(index_cache)} index files from {indexes_path}")
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+ return index_cache
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+
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+
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+ def extract_code_references(index_data: Dict) -> List[CodeReference]:
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+ """Extract code reference information from index data"""
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+ references = []
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+
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+ repo_name = index_data.get("repo_name", "Unknown")
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+ file_summaries = index_data.get("file_summaries", [])
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+
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+ for file_summary in file_summaries:
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+ reference = CodeReference(
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+ file_path=file_summary.get("file_path", ""),
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+ file_type=file_summary.get("file_type", ""),
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+ main_functions=file_summary.get("main_functions", []),
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+ key_concepts=file_summary.get("key_concepts", []),
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+ dependencies=file_summary.get("dependencies", []),
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+ summary=file_summary.get("summary", ""),
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+ lines_of_code=file_summary.get("lines_of_code", 0),
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+ repo_name=repo_name,
105
+ )
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+ references.append(reference)
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+
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+ return references
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+
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+
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+ def extract_relationships(index_data: Dict) -> List[RelationshipInfo]:
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+ """Extract relationship information from index data"""
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+ relationships = []
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+
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+ relationship_list = index_data.get("relationships", [])
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+
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+ for rel in relationship_list:
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+ relationship = RelationshipInfo(
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+ repo_file_path=rel.get("repo_file_path", ""),
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+ target_file_path=rel.get("target_file_path", ""),
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+ relationship_type=rel.get("relationship_type", ""),
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+ confidence_score=rel.get("confidence_score", 0.0),
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+ helpful_aspects=rel.get("helpful_aspects", []),
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+ potential_contributions=rel.get("potential_contributions", []),
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+ usage_suggestions=rel.get("usage_suggestions", ""),
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+ )
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+ relationships.append(relationship)
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+
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+ return relationships
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+
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+
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+ def calculate_relevance_score(
133
+ target_file: str, reference: CodeReference, keywords: List[str] = None
134
+ ) -> float:
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+ """Calculate relevance score between reference code and target file"""
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+ score = 0.0
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+
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+ # File name similarity
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+ target_name = Path(target_file).stem.lower()
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+ ref_name = Path(reference.file_path).stem.lower()
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+
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+ if target_name in ref_name or ref_name in target_name:
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+ score += 0.3
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+
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+ # File type matching
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+ target_extension = Path(target_file).suffix
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+ ref_extension = Path(reference.file_path).suffix
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+
149
+ if target_extension == ref_extension:
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+ score += 0.2
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+
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+ # Keyword matching
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+ if keywords:
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+ keyword_matches = 0
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+ total_searchable_text = (
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+ " ".join(reference.key_concepts)
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+ + " "
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+ + " ".join(reference.main_functions)
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+ + " "
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+ + reference.summary
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+ + " "
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+ + reference.file_type
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+ ).lower()
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+
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+ for keyword in keywords:
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+ if keyword.lower() in total_searchable_text:
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+ keyword_matches += 1
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+
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+ if keywords:
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+ score += (keyword_matches / len(keywords)) * 0.5
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+
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+ return min(score, 1.0)
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+
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+
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+ def find_relevant_references_in_cache(
176
+ target_file: str,
177
+ index_cache: Dict[str, Dict],
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+ keywords: List[str] = None,
179
+ max_results: int = 10,
180
+ ) -> List[Tuple[CodeReference, float]]:
181
+ """Find reference code relevant to target file from provided cache"""
182
+ all_references = []
183
+
184
+ # Collect reference information from all index files
185
+ for repo_name, index_data in index_cache.items():
186
+ references = extract_code_references(index_data)
187
+ for ref in references:
188
+ relevance_score = calculate_relevance_score(target_file, ref, keywords)
189
+ if relevance_score > 0.1: # Only keep results with certain relevance
190
+ all_references.append((ref, relevance_score))
191
+
192
+ # Sort by relevance score
193
+ all_references.sort(key=lambda x: x[1], reverse=True)
194
+
195
+ return all_references[:max_results]
196
+
197
+
198
+ def find_direct_relationships_in_cache(
199
+ target_file: str, index_cache: Dict[str, Dict]
200
+ ) -> List[RelationshipInfo]:
201
+ """Find direct relationships with target file from provided cache"""
202
+ relationships = []
203
+
204
+ # Normalize target file path (remove rice/ prefix if exists)
205
+ normalized_target = target_file.replace("rice/", "").strip("/")
206
+
207
+ # Collect relationship information from all index files
208
+ for repo_name, index_data in index_cache.items():
209
+ repo_relationships = extract_relationships(index_data)
210
+ for rel in repo_relationships:
211
+ # Normalize target file path in relationship
212
+ normalized_rel_target = rel.target_file_path.replace("rice/", "").strip("/")
213
+
214
+ # Check target file path matching (support multiple matching methods)
215
+ if (
216
+ normalized_target == normalized_rel_target
217
+ or normalized_target in normalized_rel_target
218
+ or normalized_rel_target in normalized_target
219
+ or target_file in rel.target_file_path
220
+ or rel.target_file_path in target_file
221
+ ):
222
+ relationships.append(rel)
223
+
224
+ # Sort by confidence score
225
+ relationships.sort(key=lambda x: x.confidence_score, reverse=True)
226
+
227
+ return relationships
228
+
229
+
230
+ def format_reference_output(
231
+ target_file: str,
232
+ relevant_refs: List[Tuple[CodeReference, float]],
233
+ relationships: List[RelationshipInfo],
234
+ ) -> str:
235
+ """Format reference information output"""
236
+ output_lines = []
237
+
238
+ output_lines.append(f"# Code Reference Information - {target_file}")
239
+ output_lines.append("=" * 80)
240
+ output_lines.append("")
241
+
242
+ # Direct relationship information
243
+ if relationships:
244
+ output_lines.append("## 🎯 Direct Relationships")
245
+ output_lines.append("")
246
+
247
+ for i, rel in enumerate(relationships[:5], 1):
248
+ output_lines.append(f"### {i}. {rel.repo_file_path}")
249
+ output_lines.append(f"**Relationship Type**: {rel.relationship_type}")
250
+ output_lines.append(f"**Confidence Score**: {rel.confidence_score:.2f}")
251
+ output_lines.append(
252
+ f"**Helpful Aspects**: {', '.join(rel.helpful_aspects)}"
253
+ )
254
+ output_lines.append(
255
+ f"**Potential Contributions**: {', '.join(rel.potential_contributions)}"
256
+ )
257
+ output_lines.append(f"**Usage Suggestions**: {rel.usage_suggestions}")
258
+ output_lines.append("")
259
+
260
+ # Relevant code references
261
+ if relevant_refs:
262
+ output_lines.append("## 📚 Relevant Code References")
263
+ output_lines.append("")
264
+
265
+ for i, (ref, score) in enumerate(relevant_refs[:8], 1):
266
+ output_lines.append(f"### {i}. {ref.file_path} (Relevance: {score:.2f})")
267
+ output_lines.append(f"**Repository**: {ref.repo_name}")
268
+ output_lines.append(f"**File Type**: {ref.file_type}")
269
+ output_lines.append(
270
+ f"**Main Functions**: {', '.join(ref.main_functions[:5])}"
271
+ )
272
+ output_lines.append(f"**Key Concepts**: {', '.join(ref.key_concepts[:8])}")
273
+ output_lines.append(f"**Dependencies**: {', '.join(ref.dependencies[:6])}")
274
+ output_lines.append(f"**Lines of Code**: {ref.lines_of_code}")
275
+ output_lines.append(f"**Summary**: {ref.summary[:300]}...")
276
+ output_lines.append("")
277
+
278
+ # Implementation suggestions
279
+ output_lines.append("## 💡 Implementation Suggestions")
280
+ output_lines.append("")
281
+
282
+ if relevant_refs:
283
+ # Collect all function names and concepts
284
+ all_functions = set()
285
+ all_concepts = set()
286
+ all_dependencies = set()
287
+
288
+ for ref, _ in relevant_refs[:5]:
289
+ all_functions.update(ref.main_functions)
290
+ all_concepts.update(ref.key_concepts)
291
+ all_dependencies.update(ref.dependencies)
292
+
293
+ output_lines.append("**Reference Function Name Patterns**:")
294
+ for func in sorted(list(all_functions))[:10]:
295
+ output_lines.append(f"- {func}")
296
+ output_lines.append("")
297
+
298
+ output_lines.append("**Important Concepts and Patterns**:")
299
+ for concept in sorted(list(all_concepts))[:15]:
300
+ output_lines.append(f"- {concept}")
301
+ output_lines.append("")
302
+
303
+ output_lines.append("**Potential Dependencies Needed**:")
304
+ for dep in sorted(list(all_dependencies))[:10]:
305
+ output_lines.append(f"- {dep}")
306
+ output_lines.append("")
307
+
308
+ output_lines.append("## 🚀 Next Actions")
309
+ output_lines.append(
310
+ "1. Analyze design patterns and architectural styles from the above reference code"
311
+ )
312
+ output_lines.append("2. Determine core functionalities and interfaces to implement")
313
+ output_lines.append("3. Choose appropriate dependency libraries and tools")
314
+ output_lines.append(
315
+ "4. Design implementation solution consistent with existing code style"
316
+ )
317
+ output_lines.append("5. Start writing specific code implementation")
318
+
319
+ return "\n".join(output_lines)
320
+
321
+
322
+ # ==================== MCP Tool Definitions ====================
323
+
324
+
325
+ @mcp.tool()
326
+ async def search_code_references(
327
+ indexes_path: str, target_file: str, keywords: str = "", max_results: int = 10
328
+ ) -> str:
329
+ """
330
+ **UNIFIED TOOL**: Search relevant reference code from index files for target file implementation.
331
+ This tool combines directory setup, index loading, and searching in a single call.
332
+
333
+ Args:
334
+ indexes_path: Path to the indexes directory containing JSON index files
335
+ target_file: Target file path (file to be implemented)
336
+ keywords: Search keywords, comma-separated
337
+ max_results: Maximum number of results to return
338
+
339
+ Returns:
340
+ Formatted reference code information JSON string
341
+ """
342
+ try:
343
+ # Step 1: Load index files from specified directory
344
+ logger.info(f"Loading index files from: {indexes_path}")
345
+ index_cache = load_index_files_from_directory(indexes_path)
346
+
347
+ if not index_cache:
348
+ result = {
349
+ "status": "error",
350
+ "message": f"No index files found or failed to load from: {indexes_path}",
351
+ "target_file": target_file,
352
+ "indexes_path": indexes_path,
353
+ }
354
+ return json.dumps(result, ensure_ascii=False, indent=2)
355
+
356
+ # Step 2: Parse keywords
357
+ keyword_list = (
358
+ [kw.strip() for kw in keywords.split(",") if kw.strip()] if keywords else []
359
+ )
360
+
361
+ # Step 3: Find relevant reference code
362
+ relevant_refs = find_relevant_references_in_cache(
363
+ target_file, index_cache, keyword_list, max_results
364
+ )
365
+
366
+ # Step 4: Find direct relationships
367
+ relationships = find_direct_relationships_in_cache(target_file, index_cache)
368
+
369
+ # Step 5: Format output
370
+ formatted_output = format_reference_output(
371
+ target_file, relevant_refs, relationships
372
+ )
373
+
374
+ result = {
375
+ "status": "success",
376
+ "target_file": target_file,
377
+ "indexes_path": indexes_path,
378
+ "keywords_used": keyword_list,
379
+ "total_references_found": len(relevant_refs),
380
+ "total_relationships_found": len(relationships),
381
+ "formatted_content": formatted_output,
382
+ "indexes_loaded": list(index_cache.keys()),
383
+ "total_indexes_loaded": len(index_cache),
384
+ }
385
+
386
+ logger.info(
387
+ f"Successfully found {len(relevant_refs)} references and {len(relationships)} relationships for {target_file}"
388
+ )
389
+ return json.dumps(result, ensure_ascii=False, indent=2)
390
+
391
+ except Exception as e:
392
+ logger.error(f"Error in search_code_references: {str(e)}")
393
+ result = {
394
+ "status": "error",
395
+ "message": f"Failed to search reference code: {str(e)}",
396
+ "target_file": target_file,
397
+ "indexes_path": indexes_path,
398
+ }
399
+ return json.dumps(result, ensure_ascii=False, indent=2)
400
+
401
+
402
+ @mcp.tool()
403
+ async def get_indexes_overview(indexes_path: str) -> str:
404
+ """
405
+ Get overview of all available reference code index information from specified directory
406
+
407
+ Args:
408
+ indexes_path: Path to the indexes directory containing JSON index files
409
+
410
+ Returns:
411
+ Overview information of all available reference code JSON string
412
+ """
413
+ try:
414
+ # Load index files from specified directory
415
+ index_cache = load_index_files_from_directory(indexes_path)
416
+
417
+ if not index_cache:
418
+ result = {
419
+ "status": "error",
420
+ "message": f"No index files found in: {indexes_path}",
421
+ "indexes_path": indexes_path,
422
+ }
423
+ return json.dumps(result, ensure_ascii=False, indent=2)
424
+
425
+ overview = {"total_repos": len(index_cache), "repositories": {}}
426
+
427
+ for repo_name, index_data in index_cache.items():
428
+ repo_info = {
429
+ "repo_name": index_data.get("repo_name", repo_name),
430
+ "total_files": index_data.get("total_files", 0),
431
+ "file_types": [],
432
+ "main_concepts": [],
433
+ "total_relationships": len(index_data.get("relationships", [])),
434
+ }
435
+
436
+ # Collect file types and concepts
437
+ file_summaries = index_data.get("file_summaries", [])
438
+ file_types = set()
439
+ concepts = set()
440
+
441
+ for file_summary in file_summaries:
442
+ file_types.add(file_summary.get("file_type", "Unknown"))
443
+ concepts.update(file_summary.get("key_concepts", []))
444
+
445
+ repo_info["file_types"] = sorted(list(file_types))
446
+ repo_info["main_concepts"] = sorted(list(concepts))[
447
+ :20
448
+ ] # Limit concept count
449
+
450
+ overview["repositories"][repo_name] = repo_info
451
+
452
+ result = {
453
+ "status": "success",
454
+ "overview": overview,
455
+ "indexes_directory": str(Path(indexes_path).resolve()),
456
+ "total_indexes_loaded": len(index_cache),
457
+ }
458
+
459
+ return json.dumps(result, ensure_ascii=False, indent=2)
460
+
461
+ except Exception as e:
462
+ result = {
463
+ "status": "error",
464
+ "message": f"Failed to get indexes overview: {str(e)}",
465
+ "indexes_path": indexes_path,
466
+ }
467
+ return json.dumps(result, ensure_ascii=False, indent=2)
468
+
469
+
470
+ def main():
471
+ """Main function"""
472
+ logger.info("Starting unified Code Reference Indexer MCP server")
473
+ logger.info("Available tools:")
474
+ logger.info(
475
+ "1. search_code_references(indexes_path, target_file, keywords, max_results) - UNIFIED TOOL"
476
+ )
477
+ logger.info(
478
+ "2. get_indexes_overview(indexes_path) - Get overview of available indexes"
479
+ )
480
+
481
+ # Run MCP server
482
+ mcp.run()
483
+
484
+
485
+ if __name__ == "__main__":
486
+ main()