de-ebsd 0.2.0__py3-none-any.whl

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Files changed (69) hide show
  1. de_ebsd/__init__.py +76 -0
  2. de_ebsd/core/__init__.py +23 -0
  3. de_ebsd/core/constants.py +81 -0
  4. de_ebsd/core/device.py +12 -0
  5. de_ebsd/core/geometry.py +67 -0
  6. de_ebsd/core/lambert.py +148 -0
  7. de_ebsd/core/rotation.py +139 -0
  8. de_ebsd/crystal/__init__.py +22 -0
  9. de_ebsd/crystal/data/__init__.py +0 -0
  10. de_ebsd/crystal/data/element_properties.py +29 -0
  11. de_ebsd/crystal/data/scattering_tables.py +414 -0
  12. de_ebsd/crystal/lattice.py +517 -0
  13. de_ebsd/crystal/scattering.py +339 -0
  14. de_ebsd/crystal/scattering_torch.py +233 -0
  15. de_ebsd/crystal/structure_factors.py +291 -0
  16. de_ebsd/diffraction/__init__.py +45 -0
  17. de_ebsd/diffraction/backends.py +318 -0
  18. de_ebsd/diffraction/bethe.py +28 -0
  19. de_ebsd/diffraction/kinematic.py +389 -0
  20. de_ebsd/diffraction/kvectors.py +120 -0
  21. de_ebsd/diffraction/prism.py +204 -0
  22. de_ebsd/diffraction/reflections.py +234 -0
  23. de_ebsd/index/__init__.py +61 -0
  24. de_ebsd/index/_kernels.py +222 -0
  25. de_ebsd/index/backproject.py +171 -0
  26. de_ebsd/index/crosscorr.py +654 -0
  27. de_ebsd/index/dictionary.py +362 -0
  28. de_ebsd/index/io.py +324 -0
  29. de_ebsd/index/live/__init__.py +5 -0
  30. de_ebsd/index/live/background.py +103 -0
  31. de_ebsd/index/live/calibration.py +70 -0
  32. de_ebsd/index/live/common.py +44 -0
  33. de_ebsd/index/live/deformation.py +289 -0
  34. de_ebsd/index/live/indexer.py +386 -0
  35. de_ebsd/index/preprocess.py +195 -0
  36. de_ebsd/index/refine/__init__.py +7 -0
  37. de_ebsd/index/refine/highres.py +479 -0
  38. de_ebsd/index/refine/levenberg.py +33 -0
  39. de_ebsd/index/refine/orientation.py +367 -0
  40. de_ebsd/index/refine/pattern_center.py +356 -0
  41. de_ebsd/index/spherical/__init__.py +41 -0
  42. de_ebsd/index/spherical/correlation.py +106 -0
  43. de_ebsd/index/spherical/harmonics.py +311 -0
  44. de_ebsd/index/spherical/indexer.py +345 -0
  45. de_ebsd/index/spherical/wigner.py +190 -0
  46. de_ebsd/sim/__init__.py +20 -0
  47. de_ebsd/sim/detector.py +145 -0
  48. de_ebsd/sim/masterpattern.py +231 -0
  49. de_ebsd/sim/microscope.py +93 -0
  50. de_ebsd/sim/montecarlo/__init__.py +19 -0
  51. de_ebsd/sim/montecarlo/depth.py +167 -0
  52. de_ebsd/sim/montecarlo/transport.py +532 -0
  53. de_ebsd/sim/simulator.py +291 -0
  54. de_ebsd/viz/__init__.py +53 -0
  55. de_ebsd/viz/camera.py +56 -0
  56. de_ebsd/viz/depth_widget.js +76 -0
  57. de_ebsd/viz/explorer.py +647 -0
  58. de_ebsd/viz/figures.py +67 -0
  59. de_ebsd/viz/maps.py +277 -0
  60. de_ebsd/viz/patterns.py +164 -0
  61. de_ebsd/viz/setup_widget.js +171 -0
  62. de_ebsd/viz/views.py +125 -0
  63. de_ebsd/viz/widgets.py +191 -0
  64. de_ebsd-0.2.0.dist-info/METADATA +251 -0
  65. de_ebsd-0.2.0.dist-info/RECORD +69 -0
  66. de_ebsd-0.2.0.dist-info/WHEEL +5 -0
  67. de_ebsd-0.2.0.dist-info/licenses/LICENSE +674 -0
  68. de_ebsd-0.2.0.dist-info/licenses/NOTICE +44 -0
  69. de_ebsd-0.2.0.dist-info/top_level.txt +1 -0
de_ebsd-0.2.0.dist-info/licenses/NOTICE ADDED
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+ de-ebsd is licensed under the GNU General Public License, version 3 or later
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+ (see LICENSE). It builds on the work of others, credited here.
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+
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+ EMsoft
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+ ------
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+ The physics of the master-pattern simulation is ported from EMsoft
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+ (https://github.com/EMsoft-org/EMsoftOO; Callahan and De Graef, Modelling Simul.
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+ Mater. Sci. Eng. 21, 015003, 2013, and the EMsoft source by Marc De Graef and
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+ contributors). Specifically:
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+
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+ core/constants.py physical constants (mod_global.f90)
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+ crystal/data/scattering_tables.py Weickenmeier-Kohl and Doyle-Turner
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+ coefficient tables, extracted from the
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+ Fortran source (mod_others.f90,
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+ mod_diffraction.f90)
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+ crystal/scattering.py FSCATT / WKscatter
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+ crystal/structure_factors.py CalcUcg
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+ crystal/lattice.py crystallographic structure matrices
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+ diffraction/reflections.py Initialize_ReflectionList, CalcsgDouble,
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+ Apply_BethePotentials
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+ diffraction/bethe.py Apply_BethePotentials
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+ diffraction/backends.py GetDynMat, CalcLgh, preCalcSgh
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+ diffraction/kvectors.py Calckvectors
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+ sim/montecarlo/transport.py the EMMC.cl scattering model
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+ sim/montecarlo/depth.py reader of EMsoft Monte Carlo HDF5 files
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+
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+ EMsoft is distributed under its own license, which applies to the parts of it
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+ reproduced above; see the license file in the EMsoft repository. EMsoft output is
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+ used only as a validation reference, and de-ebsd does not call EMsoft at runtime.
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+
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+ kikuchipy and orix
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+ ------------------
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+ The detector geometry (sim/detector.py, core/geometry.py), the square-Lambert
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+ conventions (core/lambert.py) and the master-pattern interpolation follow
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+ kikuchipy (https://github.com/pyxem/kikuchipy, GPL-3.0-or-later) so that patterns
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+ agree with it pixel for pixel. Orientations, symmetry and crystal maps are orix's
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+ (https://github.com/pyxem/orix).
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+
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+ EMSphInx
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+ --------
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+ The spherical-harmonic and SO(3) cross-correlation indexer follows Lenthe, Singh
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+ and De Graef, "A spherical harmonic transform approach to the indexing of
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+ electron back-scattered diffraction patterns", Ultramicroscopy 207, 112841
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+ (2019).
de_ebsd-0.2.0.dist-info/top_level.txt ADDED
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+ de_ebsd