ddi-fw 0.0.221__py3-none-any.whl → 0.0.222__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- ddi_fw/datasets/ddi_mdl/base.py +4 -3
- ddi_fw/datasets/mdf_sa_ddi/base.py +5 -3
- {ddi_fw-0.0.221.dist-info → ddi_fw-0.0.222.dist-info}/METADATA +1 -1
- {ddi_fw-0.0.221.dist-info → ddi_fw-0.0.222.dist-info}/RECORD +6 -6
- {ddi_fw-0.0.221.dist-info → ddi_fw-0.0.222.dist-info}/WHEEL +0 -0
- {ddi_fw-0.0.221.dist-info → ddi_fw-0.0.222.dist-info}/top_level.txt +0 -0
ddi_fw/datasets/ddi_mdl/base.py
CHANGED
@@ -36,8 +36,8 @@ HERE = pathlib.Path(__file__).resolve().parent
|
|
36
36
|
|
37
37
|
class DDIMDLDataset(BaseDataset,TextDatasetMixin):
|
38
38
|
dataset_name: str = "DDIMDLDataset"
|
39
|
-
index_path: str = Field(default_factory=lambda: str(
|
40
|
-
|
39
|
+
# index_path: str = Field(default_factory=lambda: str(
|
40
|
+
# pathlib.Path(__file__).resolve().parent.joinpath('indexes')))
|
41
41
|
# drugs_df: pd.DataFrame = Field(default_factory=pd.DataFrame)
|
42
42
|
# ddis_df: pd.DataFrame = Field(default_factory=pd.DataFrame)
|
43
43
|
drugs_df: Optional[pd.DataFrame] = None
|
@@ -65,7 +65,8 @@ class DDIMDLDataset(BaseDataset,TextDatasetMixin):
|
|
65
65
|
def __init__(self, **kwargs):
|
66
66
|
|
67
67
|
super().__init__(**kwargs)
|
68
|
-
|
68
|
+
self.index_path: str = Field(default_factory=lambda: str(
|
69
|
+
pathlib.Path(__file__).resolve().parent.joinpath('indexes')))
|
69
70
|
# self.additional_config = kwargs.get('dataset_additional_config', {})
|
70
71
|
if self.additional_config:
|
71
72
|
ner = self.additional_config.get('ner', {})
|
@@ -90,8 +90,8 @@ class MDFSADDIDataset(BaseDataset,TextDatasetMixin):
|
|
90
90
|
# self.index_path = kwargs.get('index_path')
|
91
91
|
|
92
92
|
dataset_name: str = "MDFSADDIDataset"
|
93
|
-
index_path: str = Field(default_factory=lambda: str(
|
94
|
-
|
93
|
+
# index_path: str = Field(default_factory=lambda: str(
|
94
|
+
# pathlib.Path(__file__).resolve().parent.joinpath('indexes')))
|
95
95
|
# drugs_df: pd.DataFrame = Field(default_factory=pd.DataFrame)
|
96
96
|
# ddis_df: pd.DataFrame = Field(default_factory=pd.DataFrame)
|
97
97
|
drugs_df: Optional[pd.DataFrame] = None
|
@@ -119,7 +119,9 @@ class MDFSADDIDataset(BaseDataset,TextDatasetMixin):
|
|
119
119
|
def __init__(self, **kwargs):
|
120
120
|
|
121
121
|
super().__init__(**kwargs)
|
122
|
-
|
122
|
+
self.index_path: str = Field(default_factory=lambda: str(
|
123
|
+
pathlib.Path(__file__).resolve().parent.joinpath('indexes')))
|
124
|
+
|
123
125
|
# self.additional_config = kwargs.get('dataset_additional_config', {})
|
124
126
|
if self.additional_config:
|
125
127
|
ner = self.additional_config.get('ner', {})
|
@@ -3,7 +3,7 @@ ddi_fw/datasets/core.py,sha256=PX6MX4hmeYxIWAKAx7NnJr1fpzR11xA8g8vAjYcQNN8,16936
|
|
3
3
|
ddi_fw/datasets/dataset_splitter.py,sha256=8H8uZTAf8N9LUZeSeHOMawtJFJhnDgUUqFcnl7dquBQ,1672
|
4
4
|
ddi_fw/datasets/db_utils.py,sha256=xRj28U_uXTRPHcz3yIICczFUHXUPiAOZtAj5BM6kH44,6465
|
5
5
|
ddi_fw/datasets/setup_._py,sha256=khYVJuW5PlOY_i_A16F3UbSZ6s6o_ljw33Byw3C-A8E,1047
|
6
|
-
ddi_fw/datasets/ddi_mdl/base.py,sha256=
|
6
|
+
ddi_fw/datasets/ddi_mdl/base.py,sha256=0fHiKtnbYrcucBRcR6fMOD1WZnZFeJ-uQXFtqJ7xnfg,11379
|
7
7
|
ddi_fw/datasets/ddi_mdl/debug.log,sha256=eWz05j8RFqZuHFDTCF7Rck5w4rvtTanFN21iZsgxO7Y,115
|
8
8
|
ddi_fw/datasets/ddi_mdl/readme.md,sha256=WC6lpmsEKvIISnZqENY7TWtzCQr98HPpE3oRsBl8pIw,625
|
9
9
|
ddi_fw/datasets/ddi_mdl/data/event.db,sha256=cmlSsf9MYjRzqR-mw3cUDnTnfT6FkpOG2yCl2mMwwew,30580736
|
@@ -46,7 +46,7 @@ ddi_fw/datasets/ddi_mdl_text/indexes/validation_fold_2.txt,sha256=fFJbN0DbKH4mve
|
|
46
46
|
ddi_fw/datasets/ddi_mdl_text/indexes/validation_fold_3.txt,sha256=NhiLF_5INQCpjOlE-RIxDKy7rYwksLdx60L6HCmDKoY,81247
|
47
47
|
ddi_fw/datasets/ddi_mdl_text/indexes/validation_fold_4.txt,sha256=bPvMCJVy7jtcaYbR-5bmdB6s7gT8NSfK2wDC7iJ0O10,81308
|
48
48
|
ddi_fw/datasets/mdf_sa_ddi/__init__.py,sha256=UEFBM92y2aJjlMJw4Jx405tOAwJ88r_nHAVgAszSjuo,68
|
49
|
-
ddi_fw/datasets/mdf_sa_ddi/base.py,sha256=
|
49
|
+
ddi_fw/datasets/mdf_sa_ddi/base.py,sha256=rMfHf3pg-XL2zgGuwByDI5354udJ98xuZTj4_wufoGM,16050
|
50
50
|
ddi_fw/datasets/mdf_sa_ddi/df_extraction_cleanxiaoyu50.csv,sha256=EOOLF_0vVVzShoofcGYlOzpztlM1m9jJdftepHicix4,25787699
|
51
51
|
ddi_fw/datasets/mdf_sa_ddi/drug_information_del_noDDIxiaoyu50.csv,sha256=lpuMz5KxPsG6MKNuIIUmT5cZquWHQiIao8tXlmOHzq8,381321
|
52
52
|
ddi_fw/datasets/mdf_sa_ddi/mdf-sa-ddi.zip,sha256=DfN8mczGvWba2y45cPqtWtXjUDXy49VOtRfpcb0tn8c,4382827
|
@@ -101,7 +101,7 @@ ddi_fw/utils/zip_helper.py,sha256=YRZA4tKZVBJwGQM0_WK6L-y5MoqkKoC-nXuuHK6CU9I,55
|
|
101
101
|
ddi_fw/vectorization/__init__.py,sha256=LcJOpLVoLvHPDw9phGFlUQGeNcST_zKV-Oi1Pm5h_nE,110
|
102
102
|
ddi_fw/vectorization/feature_vector_generation.py,sha256=EBf-XAiwQwr68az91erEYNegfeqssBR29kVgrliIyac,4765
|
103
103
|
ddi_fw/vectorization/idf_helper.py,sha256=_Gd1dtDSLaw8o-o0JugzSKMt9FpeXewTh4wGEaUd4VQ,2571
|
104
|
-
ddi_fw-0.0.
|
105
|
-
ddi_fw-0.0.
|
106
|
-
ddi_fw-0.0.
|
107
|
-
ddi_fw-0.0.
|
104
|
+
ddi_fw-0.0.222.dist-info/METADATA,sha256=WC33zHRr1ONe_rAX-dG4wf_LSc8L7qUOoEeki9PwvYY,2631
|
105
|
+
ddi_fw-0.0.222.dist-info/WHEEL,sha256=CmyFI0kx5cdEMTLiONQRbGQwjIoR1aIYB7eCAQ4KPJ0,91
|
106
|
+
ddi_fw-0.0.222.dist-info/top_level.txt,sha256=PMwHICFZTZtcpzQNPV4UQnfNXYIeLR_Ste-Wfc1h810,7
|
107
|
+
ddi_fw-0.0.222.dist-info/RECORD,,
|
File without changes
|
File without changes
|