dcnum 0.25.9__py3-none-any.whl → 0.25.10__py3-none-any.whl

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Files changed (7) hide show
  1. dcnum/_version.py +2 -2
  2. dcnum/segm/segm_torch/segm_torch_base.py +11 -4
  3. {dcnum-0.25.9.dist-info → dcnum-0.25.10.dist-info}/METADATA +1 -1
  4. {dcnum-0.25.9.dist-info → dcnum-0.25.10.dist-info}/RECORD +7 -7
  5. {dcnum-0.25.9.dist-info → dcnum-0.25.10.dist-info}/WHEEL +1 -1
  6. {dcnum-0.25.9.dist-info → dcnum-0.25.10.dist-info}/licenses/LICENSE +0 -0
  7. {dcnum-0.25.9.dist-info → dcnum-0.25.10.dist-info}/top_level.txt +0 -0
dcnum/_version.py CHANGED
@@ -17,5 +17,5 @@ __version__: str
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  __version_tuple__: VERSION_TUPLE
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  version_tuple: VERSION_TUPLE
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- __version__ = version = '0.25.9'
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- __version_tuple__ = version_tuple = (0, 25, 9)
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+ __version__ = version = '0.25.10'
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+ __version_tuple__ = version_tuple = (0, 25, 10)
dcnum/segm/segm_torch/segm_torch_base.py CHANGED
@@ -3,6 +3,8 @@ import pathlib
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  import re
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  from typing import Dict
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+ import numpy as np
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+
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  from ...meta import paths
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  from ..segmenter import Segmenter, SegmenterNotApplicableError
@@ -116,10 +118,15 @@ class TorchSegmenterBase(Segmenter):
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  """
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  key = item["key"]
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  if key in data_dict:
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- regexp = re.compile(item["regexp"])
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- matched = bool(regexp.match(data_dict[key]))
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- negate = item.get("regexp-negate", False)
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- valid = matched if not negate else not matched
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+ valid = True
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+ if "regexp" in item:
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+ re_match = bool(re.search(item["regexp"], data_dict[key],
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+ re.MULTILINE))
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+ negate = item.get("regexp-negate", False)
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+ valid = valid and (re_match if not negate else not re_match)
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+ if "value" in item:
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+ valid = valid and np.allclose(item["value"], data_dict[key],
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+ atol=0, rtol=0.01)
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  if not valid:
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  reasons_list.append(item.get("reason", "unknown reason"))
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  elif not item.get("allow-missing-key", False):
{dcnum-0.25.9.dist-info → dcnum-0.25.10.dist-info}/METADATA RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: dcnum
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- Version: 0.25.9
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+ Version: 0.25.10
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  Summary: numerics toolbox for imaging deformability cytometry
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  Author: Maximilian Schlögel, Paul Müller, Raghava Alajangi
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  Maintainer-email: Paul Müller <dev@craban.de>
{dcnum-0.25.9.dist-info → dcnum-0.25.10.dist-info}/RECORD RENAMED
@@ -1,5 +1,5 @@
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  dcnum/__init__.py,sha256=p0mYg01FQ6nsERYmx_FfVxqqHvYcSMEyIAMBIivAmO8,1206
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- dcnum/_version.py,sha256=lcAUa6uFmnm8xHO8GS8Xd2LE1e4-BcAMDWwWwgiDo-I,513
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+ dcnum/_version.py,sha256=2u4bWaMdcZXyf4_yxgykEAXNXcEaVQumowHKcuxLJUI,515
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  dcnum/os_env_st.py,sha256=4psq-gPuWTTQ118kCiTx0Mhoyads4Irn6JSUzZk8gyc,3052
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  dcnum/feat/__init__.py,sha256=jUJYWTD3VIoDNKrmryXbjHb1rGwYtK4b7VPWihYgUoo,325
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  dcnum/feat/event_extractor_manager_thread.py,sha256=6D3RVYBuH7gOoGZ4Kz74n6fhq7MtlTY26kpSwZRqg3M,7972
@@ -41,7 +41,7 @@ dcnum/segm/segmenter_manager_thread.py,sha256=vMZFBa18oO8OyVB3niy_mtEfKkGOWHEga4
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  dcnum/segm/segmenter_mpo.py,sha256=O6G4xzHKNMSmyX9HDXTfl-3f9Fk2filxvVrRIO2D9hg,14117
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  dcnum/segm/segmenter_sto.py,sha256=C55orEAZtMowNwtAT_WdSv46n5CzgLFuGq9kwdHc97I,3963
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  dcnum/segm/segm_torch/__init__.py,sha256=DtUqJTbj7ybrTbXlwHq1Y4SCzi22rMW9Cus6wX-iU-A,822
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- dcnum/segm/segm_torch/segm_torch_base.py,sha256=Z2c9_lZI4qEljQEMXuN_6CpBti57PbbjlDq0NGX3-EU,4514
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+ dcnum/segm/segm_torch/segm_torch_base.py,sha256=wPt5QAmBDQxAA3Zxrdj3l9di0nIQmlUmKVJWtEpahH8,4814
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  dcnum/segm/segm_torch/segm_torch_mpo.py,sha256=GOva6o-6_SppxWD4BeBB3ap1TR-6rIYHavtfIstaYvc,2643
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  dcnum/segm/segm_torch/segm_torch_sto.py,sha256=PTOJrP_FkaxZZul8lM4VA2HL3KyxrheDDWWdJbmJdiw,3393
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  dcnum/segm/segm_torch/torch_model.py,sha256=5aL6SwSvg1N2gATEGBhP3aA4WTHlvGzQVYuizmh0LrU,3187
@@ -51,8 +51,8 @@ dcnum/write/__init__.py,sha256=sK79IlvCFIqf2oFABVeyYedMnHOsEIQpxAauEeNO-Tw,273
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  dcnum/write/deque_writer_thread.py,sha256=ao7F1yrVKyufgC4rC0Y2_Vt7snuT6KpI7W2qVxcjdhk,1994
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  dcnum/write/queue_collector_thread.py,sha256=-p5vrk9cDhtaIMFIu_cCmvlZJafrFkW68uONonMURYo,11617
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  dcnum/write/writer.py,sha256=JkVb4KDBV3oo9r3p2yy9wECO1REx7FG0PRBmVWTxJdk,20577
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- dcnum-0.25.9.dist-info/licenses/LICENSE,sha256=rX7tNSxP-EhLz-yYUyoBGwjJheA2fiZpT1Iw0LXnJ2M,1069
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- dcnum-0.25.9.dist-info/METADATA,sha256=ZIlsz6SBct_bYtVxfz5gaNrKRRVNPUe7zC5LM3rNSfM,2354
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- dcnum-0.25.9.dist-info/WHEEL,sha256=CmyFI0kx5cdEMTLiONQRbGQwjIoR1aIYB7eCAQ4KPJ0,91
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- dcnum-0.25.9.dist-info/top_level.txt,sha256=Hmh38rgG_MFTVDpUDGuO2HWTSq80P585Het4COQzFTg,6
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- dcnum-0.25.9.dist-info/RECORD,,
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+ dcnum-0.25.10.dist-info/licenses/LICENSE,sha256=rX7tNSxP-EhLz-yYUyoBGwjJheA2fiZpT1Iw0LXnJ2M,1069
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+ dcnum-0.25.10.dist-info/METADATA,sha256=twT_YXAb4Xxt24EKrjxEg8-4UgkHDHYOfzS-prFCXTM,2355
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+ dcnum-0.25.10.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
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+ dcnum-0.25.10.dist-info/top_level.txt,sha256=Hmh38rgG_MFTVDpUDGuO2HWTSq80P585Het4COQzFTg,6
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+ dcnum-0.25.10.dist-info/RECORD,,
{dcnum-0.25.9.dist-info → dcnum-0.25.10.dist-info}/WHEEL RENAMED
@@ -1,5 +1,5 @@
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  Wheel-Version: 1.0
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- Generator: setuptools (78.1.0)
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+ Generator: setuptools (80.9.0)
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  Root-Is-Purelib: true
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  Tag: py3-none-any
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