dcmqi 0.1.0__py3-none-win_amd64.whl

dcmqi/__init__.py

@@ -0,0 +1,73 @@
+"""
+Copyright (c) 2024 Leonard Nürnberg. All rights reserved.
+
+dcmqi: Python distribution of the DCMQI library collection.
+"""
+
+from __future__ import annotations
+
+import subprocess
+import sys
+from importlib.metadata import distribution
+from pathlib import Path
+from typing import NoReturn
+
+from ._version import version as __version__
+
+__all__ = [
+    "__version__",
+    "itkimage2segimage",
+    "segimage2itkimage",
+    "tid1500writer",
+    "tid1500reader",
+    "itkimage2paramap",
+    "paramap2itkimage",
+]
+
+
+DCMQI_BIN_DIR: Path = Path(__file__).parent
+
+
+def _lookup(name: str) -> Path:
+    executable_path = f"dcmqi/bin/{name}"
+    files = distribution("dcmqi").files
+    if files is not None:
+        for _file in files:
+            if str(_file).startswith(executable_path):
+                return Path(_file.locate()).resolve(strict=True)
+    msg = f"Failed to lookup '{executable_path}` directory."
+    raise FileNotFoundError(msg)
+
+
+def _program(name: str, args: list[str]) -> int:
+    return subprocess.call([_lookup(name), *args], close_fds=False)
+
+
+def itkimage2segimage() -> NoReturn:
+    """Run the itkimage2segimage executable with arguments passed to a Python script."""
+    raise SystemExit(_program("itkimage2segimage", sys.argv[1:]))
+
+
+def segimage2itkimage() -> NoReturn:
+    """Run the segimage2itkimage executable with arguments passed to a Python script."""
+    raise SystemExit(_program("segimage2itkimage", sys.argv[1:]))
+
+
+def tid1500writer() -> NoReturn:
+    """Run the tid1500writer executable with arguments passed to a Python script."""
+    raise SystemExit(_program("tid1500writer", sys.argv[1:]))
+
+
+def tid1500reader() -> NoReturn:
+    """Run the tid1500reader executable with arguments passed to a Python script."""
+    raise SystemExit(_program("tid1500reader", sys.argv[1:]))
+
+
+def itkimage2paramap() -> NoReturn:
+    """Run the itkimage2paramap executable with arguments passed to a Python script."""
+    raise SystemExit(_program("itkimage2paramap", sys.argv[1:]))
+
+
+def paramap2itkimage() -> NoReturn:
+    """Run the paramap2itkimage executable with arguments passed to a Python script."""
+    raise SystemExit(_program("paramap2itkimage", sys.argv[1:]))

dcmqi/_version.py

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+# file generated by setuptools_scm
+# don't change, don't track in version control
+TYPE_CHECKING = False
+if TYPE_CHECKING:
+    from typing import Tuple, Union
+    VERSION_TUPLE = Tuple[Union[int, str], ...]
+else:
+    VERSION_TUPLE = object
+
+version: str
+__version__: str
+__version_tuple__: VERSION_TUPLE
+version_tuple: VERSION_TUPLE
+
+__version__ = version = '0.1.0'
+__version_tuple__ = version_tuple = (0, 1, 0)

dcmqi/_version.pyi

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+from __future__ import annotations
+
+version: str
+version_tuple: tuple[int, int, int] | tuple[int, int, int, str, str]

dcmqi-0.1.0.dist-info/METADATA

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+Metadata-Version: 2.1
+Name: dcmqi
+Version: 0.1.0
+Summary: Python distribution of the DCMQI library collection.
+Author-Email: =?utf-8?q?Leonard_N=C3=BCrnberg?= <lnuernberg@bwh.harvard.edu>
+License: Copyright 2024 Leonard Nürnberg
+        
+        Permission is hereby granted, free of charge, to any person obtaining a copy of
+        this software and associated documentation files (the "Software"), to deal in
+        the Software without restriction, including without limitation the rights to
+        use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies
+        of the Software, and to permit persons to whom the Software is furnished to do
+        so, subject to the following conditions:
+        
+        The above copyright notice and this permission notice shall be included in all
+        copies or substantial portions of the Software.
+        
+        THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+        IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+        FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+        AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+        LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+        OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+        SOFTWARE.
+Classifier: Development Status :: 1 - Planning
+Classifier: Intended Audience :: Science/Research
+Classifier: Intended Audience :: Developers
+Classifier: License :: OSI Approved :: MIT License
+Classifier: Operating System :: OS Independent
+Classifier: Programming Language :: Python
+Classifier: Programming Language :: Python :: 3
+Classifier: Programming Language :: Python :: 3 :: Only
+Classifier: Programming Language :: Python :: 3.8
+Classifier: Programming Language :: Python :: 3.9
+Classifier: Programming Language :: Python :: 3.10
+Classifier: Programming Language :: Python :: 3.11
+Classifier: Programming Language :: Python :: 3.12
+Classifier: Topic :: Scientific/Engineering
+Classifier: Typing :: Typed
+Project-URL: Homepage, https://github.com/ImagingDataCommons/dcmqi-python-distributions
+Project-URL: Bug tracker, https://github.com/ImagingDataCommons/dcmqi-python-distributions/issues
+Project-URL: Discussions, https://github.com/ImagingDataCommons/dcmqi-python-distributions/discussions
+Project-URL: Changelog, https://github.com/ImagingDataCommons/dcmqi-python-distributions/releases
+Requires-Python: >=3.8
+Provides-Extra: test
+Provides-Extra: dev
+Provides-Extra: docs
+Requires-Dist: importlib_metadata>=2.0; python_version < "3.10" and extra == "test"
+Requires-Dist: pytest>=6; extra == "test"
+Requires-Dist: pytest-cov>=3; extra == "test"
+Requires-Dist: pytest>=6; extra == "dev"
+Requires-Dist: pytest-cov>=3; extra == "dev"
+Requires-Dist: sphinx>=7.0; extra == "docs"
+Requires-Dist: myst_parser>=0.13; extra == "docs"
+Requires-Dist: sphinx_copybutton; extra == "docs"
+Requires-Dist: sphinx_autodoc_typehints; extra == "docs"
+Requires-Dist: furo>=2023.08.17; extra == "docs"
+Description-Content-Type: text/markdown
+
+# DCMQI Python Distributions
+
+[![Actions Status][actions-badge]][actions-link]
+
+[![PyPI version][pypi-version]][pypi-link]
+[![PyPI platforms][pypi-platforms]][pypi-link]
+
+<!-- SPHINX-START -->
+
+## Overview
+
+`dcmqi` (DICOM (_dcm_) for Quantitative Imaging (_qi_)) is a collection of
+libraries and command line tools with minimum dependencies to support
+standardized communication of
+[quantitative image analysis](http://journals.sagepub.com/doi/pdf/10.1177/0962280214537333)
+research data using [DICOM standard(https://en.wikipedia.org/wiki/DICOM)].
+
+This project provides the infrastructure for building the `dcmqi` Python wheels.
+For more information about `dcmqi`, please refer to
+https://github.com/QIICR/dcmqi.
+
+The Python wheels provided here contain the official `itkimage2segimage`,
+`segimage2itkimage`, `tid1500writer`, `tid1500reader`, `itkimage2paramap`, and
+`paramap2itkimage` executable, which is sourced from the
+[GitHub releases](https://github.com/QIICR/dcmqi/releases).
+
+Once the wheel is installed, a convenient launcher executable is automatically
+placed in the PATH for each of the above mentioned libraries. This launcher is
+created during installation by pip, leveraging the `[project.scripts]`
+configuration defined in the `pyproject.toml` file.
+
+## Platforms
+
+The following platforms are supported by the binary wheels:
+
+| OS           | Arch             |
+| ------------ | ---------------- |
+| Windows      | 64-bit           |
+| Linux Intel  | manylinux 64-bit |
+| macOS 10.10+ | Intel            |
+| macOS 11+    | Apple Silicon    |
+
+## License
+
+This project is maintained by Leonard Nürnberg, Mass General Brigham. It is
+covered by the OSI-approved MIT License.
+
+`dcmqi` is distributed under the OSI-approved MIT License. For further details
+regarding `dcmqi`, please visit https://github.com/QIICR/dcmqi.
+
+<!-- prettier-ignore-start -->
+[actions-badge]:            https://github.com/ImagingDataCommons/dcmqi-python-distributions/workflows/CI/badge.svg
+[actions-link]:             https://github.com/ImagingDataCommons/dcmqi-python-distributions/actions
+[pypi-link]:                https://pypi.org/project/dcmqi/
+[pypi-platforms]:           https://img.shields.io/pypi/pyversions/dcmqi
+[pypi-version]:             https://img.shields.io/pypi/v/dcmqi
+
+<!-- prettier-ignore-end -->

dcmqi-0.1.0.dist-info/RECORD

@@ -0,0 +1,15 @@
+dcmqi/__init__.py,sha256=lAkKea7YkZYpWf4pz5whd_VfwuZ--ApjMdPepAMJ9RI,2267
+dcmqi/_version.py,sha256=LihvXsX11I2jla5mXh08c4Nv7nlLSLZJCmSKYdqiruQ,427
+dcmqi/_version.pyi,sha256=OwcR0wV4xBseYdq6ELpfgv5qbkJExXh4XeevG4aK03I,122
+dcmqi/bin/itkimage2paramap.exe,sha256=aboOF4I--OVlinWfmcWmoCkLMV9JFDD6fM_h0YrYKX4,12505600
+dcmqi/bin/itkimage2segimage.exe,sha256=9AFT_aZO-0RrhVbjYO9L6DguHcqbbCFuC38STrclInA,12620800
+dcmqi/bin/paramap2itkimage.exe,sha256=pyFSlJ8NXGpKgxWDGWEToN4NhU1JIVZgNJAMorgN3do,12433920
+dcmqi/bin/segimage2itkimage.exe,sha256=YlS13jwJ0lC0prBJdtGzIe0K_rgkwmIFr5vutHGqXn4,12572160
+dcmqi/bin/tid1500reader.exe,sha256=jM32qzaQXE_FVKuPoC6TXvpJ4DnHuc3lzZY30ZvBKlo,4285440
+dcmqi/bin/tid1500writer.exe,sha256=JLJc9Y99DQEF3f3BkizeKFyxQKTnqJLpC2DYkYIJQQg,4771328
+dcmqi/py.typed,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
+dcmqi-0.1.0.dist-info/METADATA,sha256=1YfUUra2u5KwaPVhzEXOmk_MpgUYNnCJflIZKnP_k6Y,5441
+dcmqi-0.1.0.dist-info/WHEEL,sha256=Y6pf_p4zzW-uKe_bVdqFm5D8JlmCNCMqq4aqryxOnEw,102
+dcmqi-0.1.0.dist-info/entry_points.txt,sha256=fMSlxV5PyWK4RFbMKM6Rrkpyl-BkDmpiUNFvUI6vhXg,263
+dcmqi-0.1.0.dist-info/licenses/LICENSE,sha256=lawGti4Wb0p5x2hIyW3ljiC1B2zuxpO_BCQuhXy4PKM,1076
+dcmqi-0.1.0.dist-info/RECORD,,

dcmqi-0.1.0.dist-info/WHEEL

@@ -0,0 +1,5 @@
+Wheel-Version: 1.0
+Generator: scikit-build-core 0.9.2
+Root-Is-Purelib: false
+Tag: py3-none-win_amd64
+

dcmqi-0.1.0.dist-info/entry_points.txt

@@ -0,0 +1,8 @@
+[console_scripts]
+itkimage2segimage = dcmqi:itkimage2segimage
+segimage2itkimage = dcmqi:segimage2itkimage
+tid1500writer = dcmqi:tid1500writer
+tid1500reader = dcmqi:tid1500reader
+itkimage2paramap = dcmqi:itkimage2paramap
+paramap2itkimage = dcmqi:paramap2itkimage
+

dcmqi-0.1.0.dist-info/licenses/LICENSE

@@ -0,0 +1,19 @@
+Copyright 2024 Leonard Nürnberg
+
+Permission is hereby granted, free of charge, to any person obtaining a copy of
+this software and associated documentation files (the "Software"), to deal in
+the Software without restriction, including without limitation the rights to
+use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies
+of the Software, and to permit persons to whom the Software is furnished to do
+so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.