dclab 0.62.15__cp313-cp313-macosx_11_0_arm64.whl → 0.62.17__cp313-cp313-macosx_11_0_arm64.whl

dclab/rtdc_dataset/fmt_s3.py

@@ -168,13 +168,19 @@ class RTDC_S3(RTDC_HDF5):
             object_path=get_object_path(url),
             endpoint_url=(endpoint_url
                           or get_endpoint_url(url)
-                          or S3_ENDPOINT_URL),
+                          or S3_ENDPOINT_URL
+                          or os.environ.get("DCLAB_S3_ENDPOINT_URL")
+                          ),
             access_key_id=(access_key_id
                            or S3_ACCESS_KEY_ID
-                           or ""),
+                           or os.environ.get("DCLAB_S3_ACCESS_KEY_ID")
+                           or ""
+                           ),
             secret_access_key=(secret_access_key
                                or S3_SECRET_ACCESS_KEY
-                               or ""),
+                               or os.environ.get("DCLAB_S3_SECRET_ACCESS_KEY")
+                               or ""
+                               ),
             use_ssl=use_ssl,
             verify_ssl=use_ssl,
             )
@@ -236,7 +242,10 @@ def is_s3_object_available(url: str,
     """
     avail = False
     if is_s3_url(url):
-        endpoint_url = get_endpoint_url(url) or S3_ENDPOINT_URL
+        endpoint_url = (get_endpoint_url(url)
+                        or S3_ENDPOINT_URL
+                        or os.environ.get("DCLAB_S3_ENDPOINT_URL")
+                        )
         if not endpoint_url:
             warnings.warn(
                 f"Could not determine endpoint from URL '{url}'. Please "
@@ -260,12 +269,18 @@ def is_s3_object_available(url: str,
                     s3file = S3File(
                         object_path=get_object_path(url),
                         endpoint_url=endpoint_url,
-                        access_key_id=(access_key_id
-                                       or S3_ACCESS_KEY_ID
-                                       or ""),
-                        secret_access_key=(secret_access_key
-                                           or S3_SECRET_ACCESS_KEY
-                                           or ""),
+                        access_key_id=(
+                            access_key_id
+                            or S3_ACCESS_KEY_ID
+                            or os.environ.get("DCLAB_S3_ACCESS_KEY_ID")
+                            or ""
+                            ),
+                        secret_access_key=(
+                            secret_access_key
+                            or S3_SECRET_ACCESS_KEY
+                            or os.environ.get("DCLAB_S3_SECRET_ACCESS_KEY")
+                            or ""
+                            ),
                         )
                     try:
                         s3file.s3_object.load()

dclab/util.py

@@ -1,6 +1,7 @@
 """Utility methods"""
 import functools
 import hashlib
+import importlib
 import numbers
 import pathlib
 import warnings
@@ -60,6 +61,25 @@ class file_monitoring_lru_cache:
         return wrapper
 
 
+class LazyLoader():
+    """Lazy load a module on first attribute access"""
+
+    def __init__(self, modname):
+        self._modname = modname
+        self._mod = None
+
+    def __getattr__(self, attr):
+        """Get attribute from module, load module if not loaded yet"""
+
+        if self._mod is None:
+            # module is unset, load it
+            self._mod = importlib.import_module(self._modname)
+
+        # retry getattr if module was just loaded for first time
+        # call this outside exception handler in case it raises new exception
+        return getattr(self._mod, attr)
+
+
 @file_monitoring_lru_cache(maxsize=100)
 def hashfile(fname, blocksize=65536, count=0, constructor=hashlib.md5,
              hasher_class=None):

{dclab-0.62.15.dist-info → dclab-0.62.17.dist-info}/METADATA

@@ -1,10 +1,10 @@
-Metadata-Version: 2.2
+Metadata-Version: 2.4
 Name: dclab
-Version: 0.62.15
+Version: 0.62.17
 Summary: Library for real-time deformability cytometry (RT-DC)
 Author: Benedikt Hartmann, Eoghan O'Connell, Maik Herbig, Maximilian Schlögel, Nadia Sbaa, Paul Müller, Philipp Rosendahl, Raghava Alajangi
 Maintainer-email: Paul Müller <dev@craban.de>
-License: GPL version 2.0 or later
+License: GPL-2.0-or-later
 Project-URL: source, https://github.com/DC-Analysis/dclab
 Project-URL: tracker, https://github.com/DC-Analysis/dclab/issues
 Project-URL: documentation, https://dclab.readthedocs.io/en/stable/
@@ -27,8 +27,8 @@ Requires-Dist: dclab[dcor,export,http,s3,tdms]; extra == "all"
 Provides-Extra: dcor
 Requires-Dist: requests<3,>=2.31.0; extra == "dcor"
 Provides-Extra: export
-Requires-Dist: fcswrite>=0.5.0; extra == "export"
-Requires-Dist: imageio[ffmpeg]; extra == "export"
+Requires-Dist: fcswrite>=0.5.1; extra == "export"
+Requires-Dist: av; extra == "export"
 Provides-Extra: http
 Requires-Dist: requests<3,>=2.31.0; extra == "http"
 Provides-Extra: s3
@@ -36,6 +36,7 @@ Requires-Dist: boto3>=1.34.31; extra == "s3"
 Provides-Extra: tdms
 Requires-Dist: imageio[ffmpeg]; extra == "tdms"
 Requires-Dist: nptdms<1.9,>=0.23.0; extra == "tdms"
+Dynamic: license-file
 
 |dclab|
 =======

{dclab-0.62.15.dist-info → dclab-0.62.17.dist-info}/RECORD

@@ -1,15 +1,15 @@
-dclab/kde_methods.py,sha256=awlqkj819VRJzArG6Fx6myDa6qGpLoZ8S9IJ1J1YECA,9206
-dclab/_version.py,sha256=iL17I1mvKxwKGDb54cuTitpqpEsosMLPkBeojJpE4PE,515
-dclab/util.py,sha256=nLL5jwG14h1YFJ_d0L-5DwsWgyfst5hVndaiLbTkYH4,5253
+dclab/kde_methods.py,sha256=f0-zDN7ETintvGB3gSzxwgBb53YtT9jZtzI70EAX50g,365
+dclab/_version.py,sha256=GEa7QH3NrBgvyLi3LNdBdNGUvveY9cblWLa2mkR4bCI,515
+dclab/util.py,sha256=HFT5ZQV6AW8GIIruVMldukbVVdlMyKH50GUfOogAcxI,5860
 dclab/downsampling.pyx,sha256=OK7zbgGLl5gVyoU8ZBHo9EWwb8C9ChavmLNEvQvC9T0,7258
-dclab/__init__.py,sha256=1mskJAUo8HbvDhJRJFbcFB6HccFeqoRUCEHLuS64t_g,812
+dclab/__init__.py,sha256=wyJWhElQRPcq09vUqUnuquTU_KHgHxv6wQxuxQ988Iw,1583
 dclab/warn.py,sha256=MjJvyQeuvIXFQ2-fHDzbmXJ0scnHqqRJlIxfuLI_utE,523
 dclab/cached.py,sha256=eWTYBiI-HQM7JuPH-oxa5LLnhAX32GpRwlYg2kQ3sTA,2917
 dclab/http_utils.py,sha256=YtZHEwB-BBBo2fCvwhlJvlnWvfWFMHclqol3OIJ7atM,10910
 dclab/polygon_filter.py,sha256=qexmo-rXe06CUPZhN6EMJy4y4B5gXZeqejdvIB2arOE,13480
-dclab/downsampling.cpython-313-darwin.so,sha256=hV3vKzgzInrDRFPKe4a-ysPQH588N_YFAgJEGYFX25s,241968
+dclab/downsampling.cpython-313-darwin.so,sha256=OqOKz6t59Kjhj9gBj1tCAdi6YBlTu-O3BhGXVZF0bZQ,241968
 dclab/statistics.py,sha256=tJDqPlY_Jw2Hhl-s7ugMBSZAxcRuPu4LQuBAZBXz7t8,6355
-dclab/kde_contours.py,sha256=5K7PzZz-FtSGvW4IR2tLpbEKKqCSsSTQPsupu7zIsPg,6745
+dclab/kde_contours.py,sha256=UlU64lrzMQUZH11oZndW7xf7NFCzwP3FcVujwuqXDCI,278
 dclab/isoelastics/iso_LE-2D-FEM-19-volume-deform.txt,sha256=vTcazOlOXo3BQ0NQtGB_IdHKA0neOLXZ_d3JuMU--RE,83358
 dclab/isoelastics/iso_HE-3D-FEM-22-area_um-deform.txt,sha256=IjULG1KO-hClaYPoJJnwPbF2TkS9i9jxF1tbhhQTClY,71350
 dclab/isoelastics/iso_HE-2D-FEM-22-volume-deform.txt,sha256=aLOWxev_hvyP2yWquomcogn3Ze4SBfvqz-qmTOOibNw,97512
@@ -47,6 +47,10 @@ dclab/cli/common.py,sha256=uY0IexcvmScB-5AVIQhM9qMutUcSf7CM9tUrgtuawgU,7224
 dclab/cli/task_join.py,sha256=R04ZmXG2-O82E8le0ywZpy9NzOYoErw8hLx8m4q76ms,9464
 dclab/cli/task_split.py,sha256=dqW3GWkwi4ceDqRVrQx8ADGk4--KSsD3Q1knkD3ZXI4,6060
 dclab/cli/task_compress.py,sha256=LH3j41aKq5regAH-ZFdOgnXImf5DrReDJ7ITwUObUSQ,4100
+dclab/kde/contours.py,sha256=WoRqBj_xK-23FZjtaYly7E2Q8sGZ16q2ILq-DmrlmC8,6742
+dclab/kde/methods.py,sha256=SYlAjoST66hEZnRmsdZ6izMmgfebxQxTfBR5PHhzDkE,9208
+dclab/kde/__init__.py,sha256=_WSLPMfxE2su6tmO5mJxUE_9ON16-pqQUQCUlzRtyKI,55
+dclab/kde/base.py,sha256=i6bNYYeQSFlq03Z5CZjhBE-V3xpY6YLWivL3guscsnE,7683
 dclab/external/__init__.py,sha256=gb0UdzoMymEURPsTXRqVTT1ZJedJ2ubH3jApBIRkwjk,93
 dclab/external/packaging/version.py,sha256=9MLL6_EYHvGA1yCGndwL5ZmmDA_wqQsW15GyKrI6siQ,14685
 dclab/external/packaging/LICENSE,sha256=ytHvW9NA1z4HS6YU0m996spceUDD2MNIUuZcSQlobEg,197
@@ -62,16 +66,16 @@ dclab/external/statsmodels/nonparametric/__init__.py,sha256=-GEWgwsF27ems5WTBvR1
 dclab/external/statsmodels/nonparametric/kernels.py,sha256=fuy4kStFz2ZA9pqgfUb4cly-YBpXLu4TJ9-ZujayuIw,1075
 dclab/external/skimage/measure.py,sha256=y1idCqD9TUxp3-QnOiWR_d674OKaeqBJ4MN2-gVP6ro,247
 dclab/external/skimage/LICENSE,sha256=ivsSBvn3c0R9mOctWRRdza7C7wdZSRYgCVxlVqUdlB8,1452
-dclab/external/skimage/_find_contours_cy.cpython-313-darwin.so,sha256=zgkcSleTkREb2Uw-m4T37uVvx58Au9sXri0wQ1ST3O8,204104
+dclab/external/skimage/_find_contours_cy.cpython-313-darwin.so,sha256=gFanqxF7nMQw08i6ETJX7YgRClqzMo6qb4rgrYeYMsU,204104
 dclab/external/skimage/pnpoly.py,sha256=r8hFNiTz5XlUoNZjosqA0iyv1FPn0l7ewbplgFgkdaw,1347
 dclab/external/skimage/_find_contours.py,sha256=16v5eeTZBmevG8SSuXtJ6yUpVPhwfSmtc8pDD0nuuOU,9340
-dclab/external/skimage/_pnpoly.cpython-313-darwin.so,sha256=r6m8VioxErtlS3RYlzHRgzJZ5jZFioT-lK2Fk8OHJPA,221824
+dclab/external/skimage/_pnpoly.cpython-313-darwin.so,sha256=NuUN3-b0_FZETR6loKRKAQ3g4r-XCW9RdxpA7Ocz0tE,221824
 dclab/external/skimage/__init__.py,sha256=-B2QUKHAFzQuBWuuKvPDC5JIl0Zb-x3OGmbwPaE9VwQ,72
 dclab/external/skimage/_pnpoly.pyx,sha256=Qdn6xPazDschBqbr46DzB75MB2MnqvdnoTSBMK7kUGE,2504
 dclab/external/skimage/_find_contours_cy.pyx,sha256=pZJOBhMHzYEMkcz4WQVyjn7jDNrdjCfet47FU1hRAxk,7161
 dclab/external/skimage/_shared/geometry.pxd,sha256=kRsu9ifv_rL3kbRIgSLf86p0hn2oTMp6s013lZ9bBZM,346
 dclab/external/skimage/_shared/__init__.py,sha256=2sHZwTtJSlMTa3Q2YSvQW7jrPLMUSqDJQa-ROe5zfcw,37
-dclab/external/skimage/_shared/geometry.cpython-313-darwin.so,sha256=k-3LslKn1xfDe936VYGvgy0lTPD7OXiIhsvSNMOn9pU,55344
+dclab/external/skimage/_shared/geometry.cpython-313-darwin.so,sha256=zAGSk5iZBklCjl_yExaJ3C6l5hKs7PaWuYW2nmgAVOE,55344
 dclab/external/skimage/_shared/geometry.pyx,sha256=miCHUh6mBDbRRIoaF_0xAER1MRzsCAzFdlYQZhV7RmE,1667
 dclab/definitions/feat_logic.py,sha256=SXsSlAusgtE3uXcPu84dQwYZ07zxmV37DmPednA3_dM,5823
 dclab/definitions/meta_parse.py,sha256=YdaTdM8DAMsIFn5ITH9OHYGTXeAOBGWtx22oVjxXcWk,2393
@@ -83,11 +87,11 @@ dclab/rtdc_dataset/config.py,sha256=MvBteFya3R6Ch3U6UgTakCsJoBgVykTxS_Z25STWPHU,
 dclab/rtdc_dataset/check.py,sha256=lJNaz4QTe2WNlxik6zSohRHTiAYuP_bKOzSDjPGTUS0,35006
 dclab/rtdc_dataset/meta_table.py,sha256=ucqBNrgI6rDAuQFuMRckY8lp1LpnYAoRgEsLObWTJCE,648
 dclab/rtdc_dataset/feat_basin.py,sha256=ViKdvJcwFM8joysnrBYdZbA5t_wZix-6xn_FsvzpYsQ,21072
-dclab/rtdc_dataset/fmt_s3.py,sha256=OavOOGa2oOyG-VSfehFf6JVNs2k5iZalRm6ZTBu6sY4,10642
+dclab/rtdc_dataset/fmt_s3.py,sha256=FVw0q3CwiPwDKmz37EsjK2T5CLr4MsH3pvscu-gToVM,11278
 dclab/rtdc_dataset/feat_temp.py,sha256=XbDIS1iUUkRH0Zp9uVlwvK_untJ7hkOnKshK1Drsnt8,3694
 dclab/rtdc_dataset/__init__.py,sha256=MUHSGVQJ4Zc0IyU2lf01dpDWyOyNveHip-UjSkmPNvQ,486
-dclab/rtdc_dataset/core.py,sha256=hho2XD4-s-mag8xtaukf7NC-_XyE8W0dql2wAoGuS3A,37998
-dclab/rtdc_dataset/export.py,sha256=F_HgQUlK9ywINFgYrigPXLxcG-8qgSR5aalHjxNNeMs,29614
+dclab/rtdc_dataset/core.py,sha256=EjNWk9SV-2xBTRtf34XosLCOS164vGWKP5dKKLSOSq4,34441
+dclab/rtdc_dataset/export.py,sha256=RPnWNDAPW1m3vPcStjqIX-YnxDOKyWLtQ1HrA38S3Uo,30384
 dclab/rtdc_dataset/fmt_dict.py,sha256=gumVQOiVVDFUKow_483PY7cxInqo-NiBBnBhIU8s4lg,3009
 dclab/rtdc_dataset/writer.py,sha256=jc6ADyxGoujXpoXu1vF2nfZjGFMaO5LbRmoYJZ83JVo,41418
 dclab/rtdc_dataset/filter.py,sha256=AFPUBzOIi3pqXgUdMQ5CIi9ZeGOKC71rfSZKLMLgtog,10023
@@ -130,9 +134,9 @@ dclab/rtdc_dataset/fmt_tdms/event_image.py,sha256=-jp7Z-N91e4ieumYQ1huMicj7PMJqw
 dclab/rtdc_dataset/fmt_tdms/event_trace.py,sha256=Vkym0QKSw2mq1XZl5n8wDkgHXmaZwQGiMAV5AuRSJkE,5215
 dclab/rtdc_dataset/fmt_tdms/exc.py,sha256=WzrMqnyrzp8gsT8Pf7JKqGGv43ewx7d_qgtirURppRI,813
 dclab/rtdc_dataset/fmt_tdms/event_contour.py,sha256=kjo0wJx9F0gmmOOyR0NoLw6VEtSl3h63WXXkcbfnoS8,9627
-dclab-0.62.15.dist-info/RECORD,,
-dclab-0.62.15.dist-info/LICENSE,sha256=1mLfjOTOaeiMSGPJiF5hHnMQfKX88QVeZpCCXwJGj3k,18131
-dclab-0.62.15.dist-info/WHEEL,sha256=ygSUdKQqFRWAIjRhJtlcnHn2B3mflIIsg3Ttx70GyCY,109
-dclab-0.62.15.dist-info/entry_points.txt,sha256=eOpjgznu-eW-9utUpLU-77O5098YyUEgGF3ksGMdtec,273
-dclab-0.62.15.dist-info/top_level.txt,sha256=irvwZMgs1edY1Zj60ZFk7Almb9Zhk4k6E6aC4YPFnnM,6
-dclab-0.62.15.dist-info/METADATA,sha256=ihsKoitFFbwH2kq8PzX6XULZnGPW6i8OAFqglmyWGh0,4755
+dclab-0.62.17.dist-info/RECORD,,
+dclab-0.62.17.dist-info/WHEEL,sha256=Cxq5pla4scSj9raD9htoFbIhfTk0lSQlQLVCyAjgIi4,136
+dclab-0.62.17.dist-info/entry_points.txt,sha256=eOpjgznu-eW-9utUpLU-77O5098YyUEgGF3ksGMdtec,273
+dclab-0.62.17.dist-info/top_level.txt,sha256=irvwZMgs1edY1Zj60ZFk7Almb9Zhk4k6E6aC4YPFnnM,6
+dclab-0.62.17.dist-info/METADATA,sha256=sxoMpN4ygAI9x12l_IsEKUqi32wGJ3o2Tg2OKEx8cKQ,4756
+dclab-0.62.17.dist-info/licenses/LICENSE,sha256=gLDaVZWRrlnLdyfOrR0qfWjLbOVcjvoJ-kCLUK0fyXA,15360

{dclab-0.62.15.dist-info → dclab-0.62.17.dist-info}/WHEEL

@@ -1,5 +1,6 @@
 Wheel-Version: 1.0
-Generator: setuptools (75.8.2)
+Generator: setuptools (78.1.0)
 Root-Is-Purelib: false
 Tag: cp313-cp313-macosx_11_0_arm64
+Generator: delocate 0.13.0
 

{dclab-0.62.15.dist-info → dclab-0.62.17.dist-info/licenses}/LICENSE

@@ -1,5 +1,5 @@
 Unless otherwise specified by LICENSE files in individual
-directories, all code is
+directories, all code is licensed under the following license.
 
                     GNU GENERAL PUBLIC LICENSE
                        Version 2, June 1991
@@ -281,63 +281,3 @@ PROGRAMS), EVEN IF SUCH HOLDER OR OTHER PARTY HAS BEEN ADVISED OF THE
 POSSIBILITY OF SUCH DAMAGES.
 
                      END OF TERMS AND CONDITIONS
-
-            How to Apply These Terms to Your New Programs
-
-  If you develop a new program, and you want it to be of the greatest
-possible use to the public, the best way to achieve this is to make it
-free software which everyone can redistribute and change under these terms.
-
-  To do so, attach the following notices to the program.  It is safest
-to attach them to the start of each source file to most effectively
-convey the exclusion of warranty; and each file should have at least
-the "copyright" line and a pointer to where the full notice is found.
-
-    {description}
-    Copyright (C) {year}  {fullname}
-
-    This program is free software; you can redistribute it and/or modify
-    it under the terms of the GNU General Public License as published by
-    the Free Software Foundation; either version 2 of the License, or
-    (at your option) any later version.
-
-    This program is distributed in the hope that it will be useful,
-    but WITHOUT ANY WARRANTY; without even the implied warranty of
-    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-    GNU General Public License for more details.
-
-    You should have received a copy of the GNU General Public License along
-    with this program; if not, write to the Free Software Foundation, Inc.,
-    51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
-
-Also add information on how to contact you by electronic and paper mail.
-
-If the program is interactive, make it output a short notice like this
-when it starts in an interactive mode:
-
-    Gnomovision version 69, Copyright (C) year name of author
-    Gnomovision comes with ABSOLUTELY NO WARRANTY; for details type `show w'.
-    This is free software, and you are welcome to redistribute it
-    under certain conditions; type `show c' for details.
-
-The hypothetical commands `show w' and `show c' should show the appropriate
-parts of the General Public License.  Of course, the commands you use may
-be called something other than `show w' and `show c'; they could even be
-mouse-clicks or menu items--whatever suits your program.
-
-You should also get your employer (if you work as a programmer) or your
-school, if any, to sign a "copyright disclaimer" for the program, if
-necessary.  Here is a sample; alter the names:
-
-  Yoyodyne, Inc., hereby disclaims all copyright interest in the program
-  `Gnomovision' (which makes passes at compilers) written by James Hacker.
-
-  {signature of Ty Coon}, 1 April 1989
-  Ty Coon, President of Vice
-
-This General Public License does not permit incorporating your program into
-proprietary programs.  If your program is a subroutine library, you may
-consider it more useful to permit linking proprietary applications with the
-library.  If this is what you want to do, use the GNU Lesser General
-Public License instead of this License.
-