dcicutils 8.8.4.1b12__py3-none-any.whl → 8.8.4.1b13__py3-none-any.whl

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dcicutils/file_utils.py CHANGED
@@ -103,9 +103,15 @@ def are_files_equal(filea: str, fileb: str) -> bool:
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  return False
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- def create_random_file(file: Optional[str] = None,
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- prefix: Optional[str] = None, suffix: Optional[str] = None,
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+ def create_random_file(file: Optional[str] = None, prefix: Optional[str] = None, suffix: Optional[str] = None,
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  nbytes: int = 1024, binary: bool = False, line_length: Optional[int] = None) -> str:
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+ """
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+ Write to the given file (name/path) some random content. If the given file is None then writes
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+ to a temporary file. In either case, returns the file written to. The of bytes written is 1024
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+ by default be can be specified with the nbytes argument; default to writing ASCII text but if
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+ the binary argument is True then writes binary data as well; if not binary the content is in
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+ lines of 80 characters each; use the line_length argumetn in this case to change the line length.
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+ """
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  if not isinstance(nbytes, int) or nbytes < 0:
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  nbytes = 0
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  if not isinstance(file, str) or not file:
@@ -18,30 +18,31 @@ def temporary_directory() -> str:
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  @contextmanager
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- def temporary_file(name: Optional[str] = None, suffix: Optional[str] = None,
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+ def temporary_file(name: Optional[str] = None, prefix: Optional[str] = None, suffix: Optional[str] = None,
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  content: Optional[Union[str, bytes, List[str]]] = None) -> str:
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  with temporary_directory() as tmp_directory_name:
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- tmp_file_name = os.path.join(tmp_directory_name, name or tempfile.mktemp(dir="")) + (suffix or "")
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- with open(tmp_file_name, "wb" if isinstance(content, bytes) else "w") as tmp_file:
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+ tmp_file_name = f"{prefix or ''}{name or tempfile.mktemp(dir='')}{suffix or ''}"
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+ tmp_file_path = os.path.join(tmp_directory_name, tmp_file_name)
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+ with open(tmp_file_path, "wb" if isinstance(content, bytes) else "w") as tmp_file:
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  if content is not None:
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  tmp_file.write("\n".join(content) if isinstance(content, list) else content)
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- yield tmp_file_name
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+ yield tmp_file_path
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  def create_temporary_file_name(prefix: Optional[str] = None, suffix: Optional[str] = None) -> str:
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  """
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  Generates and returns the full path to file within the system temporary directory.
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  """
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- tmp_file_name = f"{datetime.utcnow().strftime('%Y%m%d%H%M%S')}{str(uuid()).replace('-', '')}"
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+ random_string = f"{datetime.utcnow().strftime('%Y%m%d%H%M%S')}{str(uuid()).replace('-', '')}"
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+ tmp_file_name = f"{prefix or ''}{random_string}{suffix or ''}"
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  return os.path.join(tempfile.gettempdir(), tmp_file_name)
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  @contextmanager
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  def temporary_random_file(prefix: Optional[str] = None, suffix: Optional[str] = None,
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  nbytes: int = 1024, binary: bool = False, line_length: Optional[int] = None) -> str:
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- with temporary_file() as tmp_file_path:
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- create_random_file(tmp_file_path, prefix=prefix, suffix=suffix,
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- nbytes=nbytes, binary=binary, line_length=line_length)
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+ with temporary_file(prefix=prefix, suffix=suffix) as tmp_file_path:
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+ create_random_file(tmp_file_path, nbytes=nbytes, binary=binary, line_length=line_length)
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  yield tmp_file_path
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@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: dcicutils
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- Version: 8.8.4.1b12
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+ Version: 8.8.4.1b13
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  Summary: Utility package for interacting with the 4DN Data Portal and other 4DN resources
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  Home-page: https://github.com/4dn-dcic/utils
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  License: MIT
@@ -28,7 +28,7 @@ dcicutils/es_utils.py,sha256=ZksLh5ei7kRUfiFltk8sd2ZSfh15twbstrMzBr8HNw4,7541
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  dcicutils/exceptions.py,sha256=4giQGtpak-omQv7BP6Ckeu91XK5fnDosC8gfdmN_ccA,9931
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  dcicutils/ff_mocks.py,sha256=6RKS4eUiu_Wl8yP_8V0CaV75w4ZdWxdCuL1CVlnMrek,36918
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  dcicutils/ff_utils.py,sha256=oIhuZPnGtfwj6bWyCc1u23JbMB_6InPp01ZqUOljd8M,73123
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- dcicutils/file_utils.py,sha256=JPM5bo871RpO7-hSTmckomTUpb5Zd21CzqktJadi_Cw,5795
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+ dcicutils/file_utils.py,sha256=vPPFiGK5scq7opVQ_Ne8eeTAjy5OtSxyAgeJUievygQ,6283
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  dcicutils/function_cache_decorator.py,sha256=XMyiEGODVr2WoAQ68vcoX_9_Xb9p8pZXdXl7keU8i2g,10026
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  dcicutils/glacier_utils.py,sha256=Q4CVXsZCbP-SoZIsZ5NMcawDfelOLzbQnIlQn-GdlTo,34149
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  dcicutils/http_utils.py,sha256=RB0x9hRMZM9Xd1x00c5J0iUzUdYzIQR0XKFiQ94HWO0,807
@@ -68,13 +68,13 @@ dcicutils/structured_data.py,sha256=BQuIMv6OPySsn6YxtXE2Er-zLE2QJuCYhEQ3V0u_UXY,
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  dcicutils/submitr/progress_constants.py,sha256=5bxyX77ql8qEJearfHEvsvXl7D0GuUODW0T65mbRmnE,2895
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  dcicutils/submitr/ref_lookup_strategy.py,sha256=Js2cVznTmgjciLWBPLCvMiwLIHXjDn3jww-gJPjYuFw,3467
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  dcicutils/task_utils.py,sha256=MF8ujmTD6-O2AC2gRGPHyGdUrVKgtr8epT5XU8WtNjk,8082
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- dcicutils/tmpfile_utils.py,sha256=AU1B2_iE_WmTAqXUokGc44NmPG7Zj_gf2FDTFByes2Q,2897
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+ dcicutils/tmpfile_utils.py,sha256=KB7481xY3RTaMvAV9dK0Oz_ZHFG1e56ieYBHX5SYZzI,3019
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  dcicutils/trace_utils.py,sha256=g8kwV4ebEy5kXW6oOrEAUsurBcCROvwtZqz9fczsGRE,1769
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  dcicutils/validation_utils.py,sha256=cMZIU2cY98FYtzK52z5WUYck7urH6JcqOuz9jkXpqzg,14797
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  dcicutils/variant_utils.py,sha256=2H9azNx3xAj-MySg-uZ2SFqbWs4kZvf61JnK6b-h4Qw,4343
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  dcicutils/zip_utils.py,sha256=_Y9EmL3D2dUZhxucxHvrtmmlbZmK4FpSsHEb7rGSJLU,3265
76
- dcicutils-8.8.4.1b12.dist-info/LICENSE.txt,sha256=qnwSmfnEWMl5l78VPDEzAmEbLVrRqQvfUQiHT0ehrOo,1102
77
- dcicutils-8.8.4.1b12.dist-info/METADATA,sha256=gzkj0v2tEtiiYCs4-1M5eUBEO-h7ObOIE0IcnbumBFQ,3397
78
- dcicutils-8.8.4.1b12.dist-info/WHEEL,sha256=7Z8_27uaHI_UZAc4Uox4PpBhQ9Y5_modZXWMxtUi4NU,88
79
- dcicutils-8.8.4.1b12.dist-info/entry_points.txt,sha256=51Q4F_2V10L0282W7HFjP4jdzW4K8lnWDARJQVFy_hw,270
80
- dcicutils-8.8.4.1b12.dist-info/RECORD,,
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+ dcicutils-8.8.4.1b13.dist-info/LICENSE.txt,sha256=qnwSmfnEWMl5l78VPDEzAmEbLVrRqQvfUQiHT0ehrOo,1102
77
+ dcicutils-8.8.4.1b13.dist-info/METADATA,sha256=gPRDYcqVxkYQNNEWUBaES-znrDZQhf-BT2Ie5ooqFwU,3397
78
+ dcicutils-8.8.4.1b13.dist-info/WHEEL,sha256=7Z8_27uaHI_UZAc4Uox4PpBhQ9Y5_modZXWMxtUi4NU,88
79
+ dcicutils-8.8.4.1b13.dist-info/entry_points.txt,sha256=51Q4F_2V10L0282W7HFjP4jdzW4K8lnWDARJQVFy_hw,270
80
+ dcicutils-8.8.4.1b13.dist-info/RECORD,,