dcicutils 8.7.0.1b7__py3-none-any.whl → 8.7.0.1b9__py3-none-any.whl

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dcicutils/portal_utils.py CHANGED
@@ -207,10 +207,10 @@ class Portal:
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208
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  def get(self, url: str, follow: bool = True, raise_for_status: bool = False, **kwargs) -> OptionalResponse:
209
209
  url = self.url(url)
210
- if not self._vapp:
210
+ if not self.vapp:
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  response = requests.get(url, allow_redirects=follow, **self._kwargs(**kwargs))
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  else:
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- response = self._vapp.get(url, **self._kwargs(**kwargs))
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+ response = self.vapp.get(url, **self._kwargs(**kwargs))
214
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  if response and response.status_code in [301, 302, 303, 307, 308] and follow:
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215
  response = response.follow()
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  response = self._response(response)
@@ -221,10 +221,10 @@ class Portal:
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  def patch(self, url: str, data: Optional[dict] = None, json: Optional[dict] = None,
222
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  raise_for_status: bool = False, **kwargs) -> OptionalResponse:
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  url = self.url(url)
224
- if not self._vapp:
224
+ if not self.vapp:
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  response = requests.patch(url, data=data, json=json, **self._kwargs(**kwargs))
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  else:
227
- response = self._vapp.patch_json(url, json or data, **self._kwargs(**kwargs))
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+ response = self.vapp.patch_json(url, json or data, **self._kwargs(**kwargs))
228
228
  response = self._response(response)
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  if raise_for_status:
230
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  response.raise_for_status()
@@ -233,29 +233,29 @@ class Portal:
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  def post(self, url: str, data: Optional[dict] = None, json: Optional[dict] = None, files: Optional[dict] = None,
234
234
  raise_for_status: bool = False, **kwargs) -> OptionalResponse:
235
235
  url = self.url(url)
236
- if not self._vapp:
236
+ if not self.vapp:
237
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  response = requests.post(url, data=data, json=json, files=files, **self._kwargs(**kwargs))
238
238
  else:
239
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  if files:
240
- response = self._vapp.post(url, json or data, upload_files=files, **self._kwargs(**kwargs))
240
+ response = self.vapp.post(url, json or data, upload_files=files, **self._kwargs(**kwargs))
241
241
  else:
242
- response = self._vapp.post_json(url, json or data, upload_files=files, **self._kwargs(**kwargs))
242
+ response = self.vapp.post_json(url, json or data, upload_files=files, **self._kwargs(**kwargs))
243
243
  response = self._response(response)
244
244
  if raise_for_status:
245
245
  response.raise_for_status()
246
246
  return response
247
247
 
248
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  def get_metadata(self, object_id: str) -> Optional[dict]:
249
- return get_metadata(obj_id=object_id, vapp=self._vapp, key=self._key)
249
+ return get_metadata(obj_id=object_id, vapp=self.vapp, key=self.key)
250
250
 
251
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  def patch_metadata(self, object_id: str, data: str) -> Optional[dict]:
252
- if self._key:
253
- return patch_metadata(obj_id=object_id, patch_item=data, key=self._key)
252
+ if self.key:
253
+ return patch_metadata(obj_id=object_id, patch_item=data, key=self.key)
254
254
  return self.patch(f"/{object_id}", data).json()
255
255
 
256
256
  def post_metadata(self, object_type: str, data: str) -> Optional[dict]:
257
- if self._key:
258
- return post_metadata(schema_name=object_type, post_item=data, key=self._key)
257
+ if self.key:
258
+ return post_metadata(schema_name=object_type, post_item=data, key=self.key)
259
259
  return self.post(f"/{object_type}", data).json()
260
260
 
261
261
  def get_health(self) -> OptionalResponse:
@@ -268,14 +268,14 @@ class Portal:
268
268
  return False
269
269
 
270
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  def get_schema(self, schema_name: str) -> Optional[dict]:
271
- return get_schema(self.schema_name(schema_name), portal_vapp=self._vapp, key=self._key)
271
+ return get_schema(self.schema_name(schema_name), portal_vapp=self.vapp, key=self.key)
272
272
 
273
273
  def get_schemas(self) -> dict:
274
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  return self.get("/profiles/").json()
275
275
 
276
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  @staticmethod
277
277
  def schema_name(name: str) -> str:
278
- return to_camel_case(name if not name.endswith(".json") else name[:-5]) if isinstance(name, str) else ""
278
+ return to_camel_case(name.replace(" ", "") if not name.endswith(".json") else name[:-5])
279
279
 
280
280
  def is_schema_type(self, value: dict, schema_type: str) -> bool:
281
281
  """
@@ -348,13 +348,13 @@ class Portal:
348
348
  return url
349
349
  if not (url := re.sub(r"/+", "/", url)).startswith("/"):
350
350
  url = "/"
351
- return self._server + url if self._server else url
351
+ return self.server + url if self.server else url
352
352
 
353
353
  def _kwargs(self, **kwargs) -> dict:
354
354
  result_kwargs = {"headers":
355
355
  kwargs.get("headers", {"Content-type": "application/json", "Accept": "application/json"})}
356
- if self._key_pair:
357
- result_kwargs["auth"] = self._key_pair
356
+ if self.key_pair:
357
+ result_kwargs["auth"] = self.key_pair
358
358
  if isinstance(timeout := kwargs.get("timeout"), int):
359
359
  result_kwargs["timeout"] = timeout
360
360
  return result_kwargs
@@ -457,9 +457,9 @@ class Portal:
457
457
  return config.make_wsgi_app()
458
458
 
459
459
  def start_for_testing(self, port: int = 7070, asynchronous: bool = False) -> Optional[Thread]:
460
- if isinstance(self._vapp, TestApp) and hasattr(self._vapp, "app") and isinstance(self._vapp.app, PyramidRouter):
460
+ if isinstance(self.vapp, TestApp) and hasattr(self.vapp, "app") and isinstance(self.vapp.app, PyramidRouter):
461
461
  def start_server() -> None: # noqa
462
- with wsgi_make_server("0.0.0.0", port or 7070, self._vapp.app) as server:
462
+ with wsgi_make_server("0.0.0.0", port or 7070, self.vapp.app) as server:
463
463
  server.serve_forever()
464
464
  if asynchronous:
465
465
  server_thread = Thread(target=start_server)
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: dcicutils
3
- Version: 8.7.0.1b7
3
+ Version: 8.7.0.1b9
4
4
  Summary: Utility package for interacting with the 4DN Data Portal and other 4DN resources
5
5
  Home-page: https://github.com/4dn-dcic/utils
6
6
  License: MIT
@@ -43,7 +43,7 @@ dcicutils/log_utils.py,sha256=7pWMc6vyrorUZQf-V-M3YC6zrPgNhuV_fzm9xqTPph0,10883
43
43
  dcicutils/misc_utils.py,sha256=bMRWWxdbhuF3PKdCZEH-H4U1ecgT3Nag3EL92D9XGoY,100973
44
44
  dcicutils/obfuscation_utils.py,sha256=fo2jOmDRC6xWpYX49u80bVNisqRRoPskFNX3ymFAmjw,5963
45
45
  dcicutils/opensearch_utils.py,sha256=V2exmFYW8Xl2_pGFixF4I2Cc549Opwe4PhFi5twC0M8,1017
46
- dcicutils/portal_utils.py,sha256=h19youXDmWGHpS1USWwkuSy6SqYpsKS3HIYzczSCgOE,23336
46
+ dcicutils/portal_utils.py,sha256=td4Z3tQPbQVo9k_r2PisT7BPUSg83R4LcrBfx-QmvVA,23297
47
47
  dcicutils/project_utils.py,sha256=qPdCaFmWUVBJw4rw342iUytwdQC0P-XKpK4mhyIulMM,31250
48
48
  dcicutils/qa_checkers.py,sha256=cdXjeL0jCDFDLT8VR8Px78aS10hwNISOO5G_Zv2TZ6M,20534
49
49
  dcicutils/qa_utils.py,sha256=TT0SiJWiuxYvbsIyhK9VO4uV_suxhB6CpuC4qPacCzQ,160208
@@ -64,8 +64,8 @@ dcicutils/trace_utils.py,sha256=g8kwV4ebEy5kXW6oOrEAUsurBcCROvwtZqz9fczsGRE,1769
64
64
  dcicutils/validation_utils.py,sha256=cMZIU2cY98FYtzK52z5WUYck7urH6JcqOuz9jkXpqzg,14797
65
65
  dcicutils/variant_utils.py,sha256=2H9azNx3xAj-MySg-uZ2SFqbWs4kZvf61JnK6b-h4Qw,4343
66
66
  dcicutils/zip_utils.py,sha256=rnjNv_k6L9jT2SjDSgVXp4BEJYLtz9XN6Cl2Fy-tqnM,2027
67
- dcicutils-8.7.0.1b7.dist-info/LICENSE.txt,sha256=qnwSmfnEWMl5l78VPDEzAmEbLVrRqQvfUQiHT0ehrOo,1102
68
- dcicutils-8.7.0.1b7.dist-info/METADATA,sha256=dei1XbwIxjsjbH1Om249Y8lYt2B9bEj_7nvkHfu7m0c,3314
69
- dcicutils-8.7.0.1b7.dist-info/WHEEL,sha256=7Z8_27uaHI_UZAc4Uox4PpBhQ9Y5_modZXWMxtUi4NU,88
70
- dcicutils-8.7.0.1b7.dist-info/entry_points.txt,sha256=8wbw5csMIgBXhkwfgsgJeuFcoUc0WsucUxmOyml2aoA,209
71
- dcicutils-8.7.0.1b7.dist-info/RECORD,,
67
+ dcicutils-8.7.0.1b9.dist-info/LICENSE.txt,sha256=qnwSmfnEWMl5l78VPDEzAmEbLVrRqQvfUQiHT0ehrOo,1102
68
+ dcicutils-8.7.0.1b9.dist-info/METADATA,sha256=rRVu3P48wn85bGP0Os3PYo_l4T81vxf7RKRrQicp-3Q,3314
69
+ dcicutils-8.7.0.1b9.dist-info/WHEEL,sha256=7Z8_27uaHI_UZAc4Uox4PpBhQ9Y5_modZXWMxtUi4NU,88
70
+ dcicutils-8.7.0.1b9.dist-info/entry_points.txt,sha256=8wbw5csMIgBXhkwfgsgJeuFcoUc0WsucUxmOyml2aoA,209
71
+ dcicutils-8.7.0.1b9.dist-info/RECORD,,