dbdicom 0.2.4__py3-none-any.whl → 0.2.6__py3-none-any.whl
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- dbdicom/extensions/skimage.py +1 -1
- {dbdicom-0.2.4.dist-info → dbdicom-0.2.6.dist-info}/METADATA +5 -22
- {dbdicom-0.2.4.dist-info → dbdicom-0.2.6.dist-info}/RECORD +6 -6
- {dbdicom-0.2.4.dist-info → dbdicom-0.2.6.dist-info}/WHEEL +1 -1
- {dbdicom-0.2.4.dist-info → dbdicom-0.2.6.dist-info/licenses}/LICENSE +0 -0
- {dbdicom-0.2.4.dist-info → dbdicom-0.2.6.dist-info}/top_level.txt +0 -0
dbdicom/extensions/skimage.py
CHANGED
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@@ -97,7 +97,7 @@ def _volume_features(arr, spacing=[1,1,1], affine=None, show_progress=print):
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slice_spacing = np.linalg.norm(affine[:3, 2])
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spacing = (column_spacing, row_spacing, slice_spacing)
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voxel_volume = spacing[0]*spacing[1]*spacing[2]
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nr_of_voxels = np.count_nonzero(array)
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nr_of_voxels = np.count_nonzero(array > 0.5)
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volume = nr_of_voxels * voxel_volume
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# Surface properties - for now only extracting surface area
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# Note: this is smoothing the surface first - not tested in depth whether this is necessary or helpful.
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@@ -1,6 +1,6 @@
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Metadata-Version: 2.
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Metadata-Version: 2.4
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Name: dbdicom
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Version: 0.2.
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Version: 0.2.6
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Summary: A pythonic interface for reading and writing DICOM databases
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Author-email: Steven Sourbron <s.sourbron@sheffield.ac.uk>, Ebony Gunwhy <e.gunwhy@sheffield.ac.uk>
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Project-URL: Homepage, https://qib-sheffield.github.io/dbdicom/
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@@ -19,7 +19,7 @@ Description-Content-Type: text/markdown
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License-File: LICENSE
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Requires-Dist: matplotlib
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Requires-Dist: nibabel
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Requires-Dist: numpy
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Requires-Dist: numpy
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Requires-Dist: pandas
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Requires-Dist: pydicom
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Requires-Dist: python-gdcm
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@@ -28,29 +28,12 @@ Requires-Dist: importlib-resources
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Requires-Dist: scipy
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Requires-Dist: imageio
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Requires-Dist: vreg
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Provides-Extra: docs
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Requires-Dist: sphinx; extra == "docs"
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Requires-Dist: pydata-sphinx-theme; extra == "docs"
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Requires-Dist: myst-parser; extra == "docs"
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Requires-Dist: sphinx-copybutton; extra == "docs"
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Requires-Dist: sphinx-design; extra == "docs"
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Requires-Dist: sphinx-remove-toctrees; extra == "docs"
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Requires-Dist: autodocsumm; extra == "docs"
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Requires-Dist: docutils; extra == "docs"
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Requires-Dist: sphinxcontrib-applehelp; extra == "docs"
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Requires-Dist: sphinxcontrib-devhelp; extra == "docs"
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Requires-Dist: sphinxcontrib-htmlhelp; extra == "docs"
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Requires-Dist: sphinxcontrib-jsmath; extra == "docs"
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Requires-Dist: sphinxcontrib-qthelp; extra == "docs"
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Requires-Dist: sphinxcontrib-serializinghtml; extra == "docs"
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Requires-Dist: sphinx-gallery; extra == "docs"
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Provides-Extra: extensions
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Requires-Dist:
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Requires-Dist: scikit-image<=0.19.0; extra == "extensions"
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Requires-Dist: SimpleITK-SimpleElastix; extra == "extensions"
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Requires-Dist: scikit-image; extra == "extensions"
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Requires-Dist: itk-elastix; extra == "extensions"
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Requires-Dist: dipy; extra == "extensions"
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Requires-Dist: scikit-learn; extra == "extensions"
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Dynamic: license-file
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`dbdicom` is a Pythonic interface for reading and writing DICOM databases.
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@@ -21,7 +21,7 @@ dbdicom/extensions/elastix.py,sha256=0gNgiC0RAEjLBhovgRtaLy31xxUy6rJWoapm_3tMCQ8
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dbdicom/extensions/matplotlib.py,sha256=k9KK-mZW8TpW37PgoFre3yb4ffRCRrPVeQKEGZnQoXw,4218
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dbdicom/extensions/numpy.py,sha256=13PPKj-GCAstSb7uQ8_XAZ2borYkDVKhqcAs7KVA6pc,10542
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dbdicom/extensions/scipy.py,sha256=xQ3H3puoE9kF1qG5Pvl6gaQD4TdL6-f3V8Cz7z1_L0A,52884
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dbdicom/extensions/skimage.py,sha256=
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dbdicom/extensions/skimage.py,sha256=b2UhSn96KXonq9cwgDg7hMm_ySA1NsnWxYHSY9oQI6o,38569
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dbdicom/extensions/sklearn.py,sha256=KxxAlzh8ZI7YBkLS529k9VaAObCCVZT8exvEQThcYCY,9351
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dbdicom/extensions/vreg.py,sha256=PbCqTRsLKmbksRYsM_piBrcJL2XV89_jenw85Ozjzwk,67522
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dbdicom/external/__init__.py,sha256=XNQqfspyf6vFGedXlRKZsUB8k8E-0W19Uamwn8Aioxo,316
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@@ -59,8 +59,8 @@ dbdicom/utils/dcm4che.py,sha256=Vxq8NYWWK3BuqJkzhBQ89oMqzJlnxqTxgsgTo_Frznc,2317
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dbdicom/utils/files.py,sha256=HkAr03EmpcLkfcr6cS13_g-vqbE1acRYmTJP3e5zNas,2844
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dbdicom/utils/image.py,sha256=IPTD-4adMy5rf5rgSwfR6ImuBZojMfnp4-zKeuG9zik,26385
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dbdicom/utils/variables.py,sha256=vUh5cDnmCft5hoXDYXUvfkg5Cy5WlgMAogU38Y_BKRo,5753
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dbdicom-0.2.
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dbdicom-0.2.
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dbdicom-0.2.
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dbdicom-0.2.
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dbdicom-0.2.
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dbdicom-0.2.6.dist-info/licenses/LICENSE,sha256=HrhfyXIkWY2tGFK11kg7vPCqhgh5DcxleloqdhrpyMY,11558
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dbdicom-0.2.6.dist-info/METADATA,sha256=PwaXplDjZ7num1iqyWF9sS8IALHwW85zEm-LksCP24g,2532
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dbdicom-0.2.6.dist-info/WHEEL,sha256=zaaOINJESkSfm_4HQVc5ssNzHCPXhJm0kEUakpsEHaU,91
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dbdicom-0.2.6.dist-info/top_level.txt,sha256=nJWxXg4YjD6QblfmhrzTMXcr8FSKNc0Yk-CAIDUsYkQ,8
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dbdicom-0.2.6.dist-info/RECORD,,
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File without changes
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File without changes
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