dbdicom 0.2.1__py3-none-any.whl → 0.2.3__py3-none-any.whl

dbdicom-0.2.3.dist-info/METADATA

@@ -0,0 +1,88 @@
+Metadata-Version: 2.1
+Name: dbdicom
+Version: 0.2.3
+Summary: A pythonic interface for reading and writing DICOM databases
+Author-email: Steven Sourbron <s.sourbron@sheffield.ac.uk>, Ebony Gunwhy <e.gunwhy@sheffield.ac.uk>
+Project-URL: Homepage, https://qib-sheffield.github.io/dbdicom/
+Keywords: python,medical imaging,DICOM
+Classifier: Development Status :: 3 - Alpha
+Classifier: Intended Audience :: Developers
+Classifier: Intended Audience :: Science/Research
+Classifier: Topic :: Scientific/Engineering
+Classifier: Environment :: Console
+Classifier: Operating System :: OS Independent
+Classifier: License :: OSI Approved :: Apache Software License
+Classifier: Programming Language :: Python
+Classifier: Programming Language :: Python :: 3
+Requires-Python: >=3.6
+Description-Content-Type: text/markdown
+License-File: LICENSE
+Requires-Dist: matplotlib
+Requires-Dist: nibabel
+Requires-Dist: numpy<=1.26.4
+Requires-Dist: pandas
+Requires-Dist: pydicom
+Requires-Dist: python-gdcm
+Requires-Dist: pylibjpeg-libjpeg
+Requires-Dist: importlib-resources
+Requires-Dist: scipy
+Requires-Dist: imageio
+Provides-Extra: docs
+Requires-Dist: sphinx; extra == "docs"
+Requires-Dist: pydata-sphinx-theme; extra == "docs"
+Requires-Dist: myst-parser; extra == "docs"
+Requires-Dist: sphinx-copybutton; extra == "docs"
+Requires-Dist: sphinx-design; extra == "docs"
+Requires-Dist: sphinx-remove-toctrees; extra == "docs"
+Requires-Dist: autodocsumm; extra == "docs"
+Requires-Dist: docutils; extra == "docs"
+Requires-Dist: sphinxcontrib-applehelp; extra == "docs"
+Requires-Dist: sphinxcontrib-devhelp; extra == "docs"
+Requires-Dist: sphinxcontrib-htmlhelp; extra == "docs"
+Requires-Dist: sphinxcontrib-jsmath; extra == "docs"
+Requires-Dist: sphinxcontrib-qthelp; extra == "docs"
+Requires-Dist: sphinxcontrib-serializinghtml; extra == "docs"
+Requires-Dist: sphinx-gallery; extra == "docs"
+Provides-Extra: extensions
+Requires-Dist: scipy; extra == "extensions"
+Requires-Dist: scikit-image<=0.19.0; extra == "extensions"
+Requires-Dist: SimpleITK-SimpleElastix; extra == "extensions"
+Requires-Dist: itk-elastix; extra == "extensions"
+Requires-Dist: dipy; extra == "extensions"
+Requires-Dist: scikit-learn; extra == "extensions"
+
+`dbdicom` is a Pythonic interface for reading and writing DICOM databases.
+
+# Installation
+
+`pip install dbdicom`
+
+# Documentation
+
+For more detail, see the current [dbdicom documentation](https://qib-sheffield.github.io/dbdicom/).
+
+# Ambition
+
+The DICOM format is the universally recognised standard for medical imaging, 
+but working with DICOM data remains a challenging task for data scientists. 
+
+``dbdicom`` aims to provide an intuitive programming interface for reading and 
+writing DICOM databases - replacing unfamiliar DICOM-native concepts by 
+pythonic language and syntax. 
+
+# Disclaimer
+
+`dbdicom` is developed in public and currently trialled in ongoing 
+multi-centre clinical studies 
+[iBEAt](https://bmcnephrol.biomedcentral.com/articles/10.1186/s12882-020-01901-x>) 
+and [AFiRM](https://www.uhdb.nhs.uk/afirm-study/). However, ``dbdicom`` is 
+work in progress and **not yet sufficiently stable for wider use**. Current 
+dissemination activities, such as on the 
+[ISMRM (Toronto 2023)](https://www.ismrm.org/23m/), are limited in scope and 
+intended to get early feedback from the community. 
+
+
+
+
+
+

{dbdicom-0.2.1.dist-info → dbdicom-0.2.3.dist-info}/RECORD

@@ -1,32 +1,37 @@
-dbdicom/__init__.py,sha256=9x5CoBXnK6fyAN0LnYPVttZFuvMXgr8xKR-j9kF4gWA,466
-dbdicom/create.py,sha256=BdnJ7rGQUh2DhgFTjApjOrHr6u8BnviiALKohee3XEc,19103
-dbdicom/manager.py,sha256=dEFXEvvTLh3yvfo6_1sdVMKPToHxx0VyDFC1Lf_KXoo,81852
+dbdicom/__init__.py,sha256=rXC7OyQufyuAHqkUxxnw-LaQSw_Z1pZu86QNvj5wtrI,503
+dbdicom/create.py,sha256=v_hLU-5OtJn38FSUDw7d6B0bCIg1LQB49449aG6Jrhs,16518
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 dbdicom/message.py,sha256=kHcb-WuK_SzIqX76X55YIqSbTn3OdFC052qDkaKfIC8,3581
-dbdicom/record.py,sha256=xeMD7L5_WRJkyOvCSXy-0ezxoTGrV7luly-NFsEJxzM,58645
+dbdicom/pipelines.py,sha256=keBsBEjEipfu9reh3ExhHT2sgRksbL5MuRDHF4OywEI,2280
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 dbdicom/ds/__init__.py,sha256=gX_ui37gPc_A9h0ZsBYj1-Uh7QdlmtBGrbcbXuOM8Bk,459
 dbdicom/ds/create.py,sha256=_np1bXXH6lfls6JSrPPbgy8X8q6QOj5s83tYUIAaEUk,2132
-dbdicom/ds/dataset.py,sha256=eQ2S5SYUVxb_iAgijcAOlYvNO-LyvTgWZ_Jdm7sehbQ,28584
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 dbdicom/ds/dictionaries.py,sha256=g_9EB5jXBmzxp0GFhYC6lQ-tKwxje03ukV5EAH3E_l0,23717
 dbdicom/ds/types/ct_image.py,sha256=2TvEl267TnIkkuJQzPLh9STeSJxKt_ZQi4SEBYmQuiI,3189
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+dbdicom/extensions/elastix.py,sha256=0gNgiC0RAEjLBhovgRtaLy31xxUy6rJWoapm_3tMCQ8,22522
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 dbdicom/external/dcm4che/bin/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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-dbdicom/external/dcm4che/bin/emf2sf,sha256=FlWAWQ_tJWGFAgdAv7e3A2fWBWV7sI4RxBnCK26Nyz4,1565
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 dbdicom/external/dcm4che/bin/emf2sf.bat,sha256=Vh0ry9KNJX_WXcyCrLSxbJ_6Crot9rjmwi__u2GZqLY,1375
-dbdicom/external/dcm4che/bin/__pycache__/__init__.cpython-310.pyc,sha256=_jhZPzvLDVI9KAjeAn8oIYVIIXRgBxIMB_qJT-LIk0k,191
-dbdicom/external/dcm4che/bin/__pycache__/__init__.cpython-37.pyc,sha256=34NVXTsQEUo91tRZKWuG49EJiYpv5lxlORumlJSXJ8Q,185
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 dbdicom/external/dcm4che/etc/emf2sf/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 dbdicom/external/dcm4che/etc/emf2sf/log4j.properties,sha256=3hHcBFt2oNRjvHtix5bfuEsnKfdv5IYOkbsyoY9g7cM,223
@@ -39,43 +44,24 @@ dbdicom/external/dcm4che/lib/dcm4che-tool-emf2sf-5.23.1.jar,sha256=pkpJRD00HQ4sE
 dbdicom/external/dcm4che/lib/log4j-1.2.17.jar,sha256=HTFpZEVpdyBScJF1Q2kIKmZRvUl4G2AF3rlOVnU0Bvk,489884
 dbdicom/external/dcm4che/lib/slf4j-api-1.7.30.jar,sha256=zboHlk0btAoHYUhcax6ML4_Z6x0ZxTkorA1_lRAQXFc,41472
 dbdicom/external/dcm4che/lib/slf4j-log4j12-1.7.30.jar,sha256=TUHgHEDK-KbHSt0rBzBV2KTOHDDlgVQXexPxLXirvns,12211
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 dbdicom/external/dcm4che/lib/windows-x86/clib_jiio.dll,sha256=C2dAjNyefOm3POrUxorEF6T-FTztpo0nfGAsUrDyQyg,720896
 dbdicom/external/dcm4che/lib/windows-x86/clib_jiio_sse2.dll,sha256=uD9GLN_hPf9mM9APzlp9j6770awKP6xnlaooMrxHpkg,1089536
 dbdicom/external/dcm4che/lib/windows-x86/clib_jiio_util.dll,sha256=wi4yyrI1gTRo_bBpj0E097BQBiHZd8IqVifKr6kfkRE,40960
 dbdicom/external/dcm4che/lib/windows-x86/opencv_java.dll,sha256=QanyzLy0Cd79-aOVPwOcXwikUYeutne0Au-Um91_B4M,8505856
 dbdicom/external/dcm4che/lib/windows-x86-64/opencv_java.dll,sha256=TmjW2SbG4MR3GQ95T8xCVVDLgsdKukgaHBPUvWkfXp8,11039232
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 dbdicom/types/patient.py,sha256=YtBTwJDo8EiquJ2vLcyBW7Pzz7EISKhzvxq2506QSNo,1312
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 dbdicom/types/study.py,sha256=iX6gjA905DBvmTEwxSuppp_E7XXkTHvN3ezAnu362Es,2031
 dbdicom/utils/dcm4che.py,sha256=Vxq8NYWWK3BuqJkzhBQ89oMqzJlnxqTxgsgTo_Frznc,2317
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+dbdicom/utils/vreg.py,sha256=KPnc930-K0Uz7M9YJ2jDhwqnpjkaPfHYENsDcnKVqIo,112730
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+dbdicom-0.2.3.dist-info/RECORD,,

{dbdicom-0.2.1.dist-info → dbdicom-0.2.3.dist-info}/WHEEL

@@ -1,5 +1,5 @@
 Wheel-Version: 1.0
-Generator: bdist_wheel (0.40.0)
+Generator: setuptools (75.6.0)
 Root-Is-Purelib: true
 Tag: py3-none-any
 

dbdicom/wrappers/__init__.py

@@ -1,7 +0,0 @@
-# from . import (
-#     numpy,
-#     dipy,
-#     scipy, 
-#     elastix,
-#     skimage,
-# )