dayhoff-tools 1.2.3__py3-none-any.whl → 1.2.5__py3-none-any.whl

dayhoff_tools/warehouse.py

@@ -282,6 +282,27 @@ def add_to_warehouse(
     # Change the working directory to the warehouse folder
     os.chdir("warehouse")
 
+    # Configure DVC cache for Lightning Studio if needed
+    if os.path.exists("/teamspace/studios/this_studio"):
+        studio_cache_dir = "/teamspace/studios/this_studio/.dvc_cache"
+        os.makedirs(studio_cache_dir, exist_ok=True)
+        try:
+            result = subprocess.run(
+                ["dvc", "cache", "dir"], capture_output=True, text=True, check=True
+            )
+            current_cache = result.stdout.strip()
+            if current_cache != studio_cache_dir:
+                subprocess.run(
+                    ["dvc", "cache", "dir", studio_cache_dir, "--local"], check=True
+                )
+                print(
+                    f"✅ Configured warehouse DVC cache for Lightning Studio: {studio_cache_dir}"
+                )
+        except subprocess.CalledProcessError:
+            subprocess.run(
+                ["dvc", "cache", "dir", studio_cache_dir, "--local"], check=True
+            )
+
     # Add and push the data file
     subprocess.run(["dvc", "add", warehouse_path], check=True)
 

{dayhoff_tools-1.2.3.dist-info → dayhoff_tools-1.2.5.dist-info}/METADATA

@@ -1,13 +1,11 @@
 Metadata-Version: 2.3
 Name: dayhoff-tools
-Version: 1.2.3
+Version: 1.2.5
 Summary: Common tools for all the repos at Dayhoff Labs
 Author: Daniel Martin-Alarcon
 Author-email: dma@dayhofflabs.com
-Requires-Python: >=3.10,<4.0
+Requires-Python: >=3.12,<4.0
 Classifier: Programming Language :: Python :: 3
-Classifier: Programming Language :: Python :: 3.10
-Classifier: Programming Language :: Python :: 3.11
 Classifier: Programming Language :: Python :: 3.12
 Classifier: Programming Language :: Python :: 3.13
 Provides-Extra: embedders
@@ -26,13 +24,13 @@ Requires-Dist: pandas (>=2.2.3) ; extra == "embedders"
 Requires-Dist: pandas (>=2.2.3) ; extra == "full"
 Requires-Dist: pyyaml (>=6.0)
 Requires-Dist: questionary (>=2.0.1)
-Requires-Dist: rdkit-pypi (>=2022.9.5) ; extra == "full"
+Requires-Dist: rdkit (>=2025.3.2) ; extra == "full"
 Requires-Dist: requests (>=2.31.0)
 Requires-Dist: sentencepiece (>=0.2.0) ; extra == "embedders"
 Requires-Dist: sentencepiece (>=0.2.0) ; extra == "full"
 Requires-Dist: sqlalchemy (>=2.0.40,<3.0.0) ; extra == "full"
 Requires-Dist: toml (>=0.10)
-Requires-Dist: torch (>=2.4.0) ; extra == "embedders"
+Requires-Dist: torch (>=2.5.0) ; extra == "embedders"
 Requires-Dist: tqdm (>=4.67.1) ; extra == "embedders"
 Requires-Dist: tqdm (>=4.67.1) ; extra == "full"
 Requires-Dist: transformers (==4.36.2) ; extra == "full"

{dayhoff_tools-1.2.3.dist-info → dayhoff_tools-1.2.5.dist-info}/RECORD

@@ -25,8 +25,8 @@ dayhoff_tools/intake/structure.py,sha256=ufN3gAodQxhnt7psK1VTQeu9rKERmo_PhoxIbB4
 dayhoff_tools/intake/uniprot.py,sha256=BZYJQF63OtPcBBnQ7_P9gulxzJtqyorgyuDiPeOJqE4,16456
 dayhoff_tools/logs.py,sha256=DKdeP0k0kliRcilwvX0mUB2eipO5BdWUeHwh-VnsICs,838
 dayhoff_tools/sqlite.py,sha256=jV55ikF8VpTfeQqqlHSbY8OgfyfHj8zgHNpZjBLos_E,18672
-dayhoff_tools/warehouse.py,sha256=TqV8nex1AluNaL4JuXH5zuu9P7qmE89lSo6f_oViy6U,14965
-dayhoff_tools-1.2.3.dist-info/METADATA,sha256=xJbC0wrh9ZuguuDzKouBca3FwaPKFrfjA54n4LAFSiw,2842
-dayhoff_tools-1.2.3.dist-info/WHEEL,sha256=b4K_helf-jlQoXBBETfwnf4B04YC67LOev0jo4fX5m8,88
-dayhoff_tools-1.2.3.dist-info/entry_points.txt,sha256=iAf4jteNqW3cJm6CO6czLxjW3vxYKsyGLZ8WGmxamSc,49
-dayhoff_tools-1.2.3.dist-info/RECORD,,
+dayhoff_tools/warehouse.py,sha256=8YbnQ--usrEgDQGfvpV4MrMji55A0rq2hZaOgFGh6ag,15896
+dayhoff_tools-1.2.5.dist-info/METADATA,sha256=EReORxgYDfQ8QCuuC0Z0z-jg5NxbQr4WNFIbNPQ2T18,2735
+dayhoff_tools-1.2.5.dist-info/WHEEL,sha256=b4K_helf-jlQoXBBETfwnf4B04YC67LOev0jo4fX5m8,88
+dayhoff_tools-1.2.5.dist-info/entry_points.txt,sha256=iAf4jteNqW3cJm6CO6czLxjW3vxYKsyGLZ8WGmxamSc,49
+dayhoff_tools-1.2.5.dist-info/RECORD,,