dayhoff-tools 1.1.31__py3-none-any.whl → 1.1.32__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- dayhoff_tools/deployment/deploy_gcp.py +12 -1
- {dayhoff_tools-1.1.31.dist-info → dayhoff_tools-1.1.32.dist-info}/METADATA +1 -1
- {dayhoff_tools-1.1.31.dist-info → dayhoff_tools-1.1.32.dist-info}/RECORD +5 -5
- {dayhoff_tools-1.1.31.dist-info → dayhoff_tools-1.1.32.dist-info}/WHEEL +0 -0
- {dayhoff_tools-1.1.31.dist-info → dayhoff_tools-1.1.32.dist-info}/entry_points.txt +0 -0
|
@@ -75,9 +75,20 @@ def create_batch_job_config(config: dict, image_uri: str) -> dict:
|
|
|
75
75
|
"commands": ["-c", " ".join(entrypoint_command)],
|
|
76
76
|
}
|
|
77
77
|
|
|
78
|
+
# Handle container options - both shared memory and any custom options
|
|
79
|
+
docker_options = []
|
|
80
|
+
|
|
78
81
|
# Add shared memory option if specified
|
|
79
82
|
if "shared_memory" in config.get("docker", {}):
|
|
80
|
-
|
|
83
|
+
docker_options.append(f"--shm-size={config['docker']['shared_memory']}")
|
|
84
|
+
|
|
85
|
+
# Add any custom Docker options if specified
|
|
86
|
+
if "options" in config.get("docker", {}):
|
|
87
|
+
docker_options.append(config["docker"]["options"])
|
|
88
|
+
|
|
89
|
+
# Set the options field if any options were collected
|
|
90
|
+
if docker_options:
|
|
91
|
+
container_config["options"] = " ".join(docker_options)
|
|
81
92
|
|
|
82
93
|
# Build the task group configuration
|
|
83
94
|
task_group = {
|
|
@@ -8,7 +8,7 @@ dayhoff_tools/cli/swarm_commands.py,sha256=5EyKj8yietvT5lfoz8Zx0iQvVaNgc3SJX1z2z
|
|
|
8
8
|
dayhoff_tools/cli/utility_commands.py,sha256=ER4VrJt4hu904MwrcltUXjwBWT4uFrP-aPXjdXyT3F8,24685
|
|
9
9
|
dayhoff_tools/deployment/base.py,sha256=8tXwsPYvRo-zV-aNhHw1c7Rji-KWg8S5xoCCznFnVVI,17412
|
|
10
10
|
dayhoff_tools/deployment/deploy_aws.py,sha256=O0gQxHioSU_sNU8T8MD4wSOPvWc--V8eRRZzlRu035I,16446
|
|
11
|
-
dayhoff_tools/deployment/deploy_gcp.py,sha256=
|
|
11
|
+
dayhoff_tools/deployment/deploy_gcp.py,sha256=GFaRl3gVPQZcrJXw6lWQPJA-vZ6Bl2cDcEyzT9v8fK0,6188
|
|
12
12
|
dayhoff_tools/deployment/deploy_utils.py,sha256=StFwbqnr2_FWiKVg3xnJF4kagTHzndqqDkpaIOaAn_4,26027
|
|
13
13
|
dayhoff_tools/deployment/job_runner.py,sha256=hljvFpH2Bw96uYyUup5Ths72PZRL_X27KxlYzBMgguo,5086
|
|
14
14
|
dayhoff_tools/deployment/processors.py,sha256=q2io07xO6f6twEH1iLz9GFoGaKh76qC4kcv519Q2G7g,34583
|
|
@@ -26,7 +26,7 @@ dayhoff_tools/intake/uniprot.py,sha256=BZYJQF63OtPcBBnQ7_P9gulxzJtqyorgyuDiPeOJq
|
|
|
26
26
|
dayhoff_tools/logs.py,sha256=DKdeP0k0kliRcilwvX0mUB2eipO5BdWUeHwh-VnsICs,838
|
|
27
27
|
dayhoff_tools/sqlite.py,sha256=jV55ikF8VpTfeQqqlHSbY8OgfyfHj8zgHNpZjBLos_E,18672
|
|
28
28
|
dayhoff_tools/warehouse.py,sha256=TqV8nex1AluNaL4JuXH5zuu9P7qmE89lSo6f_oViy6U,14965
|
|
29
|
-
dayhoff_tools-1.1.
|
|
30
|
-
dayhoff_tools-1.1.
|
|
31
|
-
dayhoff_tools-1.1.
|
|
32
|
-
dayhoff_tools-1.1.
|
|
29
|
+
dayhoff_tools-1.1.32.dist-info/METADATA,sha256=ySjustGiiVOM1hnk9npS0uZ0svx3vb2vy7oM1Z1sOa4,2843
|
|
30
|
+
dayhoff_tools-1.1.32.dist-info/WHEEL,sha256=b4K_helf-jlQoXBBETfwnf4B04YC67LOev0jo4fX5m8,88
|
|
31
|
+
dayhoff_tools-1.1.32.dist-info/entry_points.txt,sha256=iAf4jteNqW3cJm6CO6czLxjW3vxYKsyGLZ8WGmxamSc,49
|
|
32
|
+
dayhoff_tools-1.1.32.dist-info/RECORD,,
|
|
File without changes
|
|
File without changes
|