dayhoff-tools 1.0.14__py3-none-any.whl → 1.0.16__py3-none-any.whl

dayhoff_tools/cli/utility_commands.py

@@ -357,19 +357,22 @@ def build_and_upload_wheel(bump_part: str = "patch"):
 def update_dayhoff_tools():
     """Update the dayhoff-tools package to the latest version using uv.
 
-    Runs `uv add dayhoff-tools@latest` which updates pyproject.toml and uv.lock.
+    Runs `uv add dayhoff-tools@latest --group common` which attempts to update
+    dayhoff-tools within the 'common' dependency group.
     """
     try:
-        print("Updating dayhoff-tools to the latest version using uv...")
-        # Use uv add to update the package and lock file
-        subprocess.run(["uv", "add", "dayhoff-tools@latest"], check=True)
-        print("Update complete!")
+        print(
+            "Updating dayhoff-tools to the latest version in 'common' group using uv..."
+        )
+        # Use uv add with --group common to explicitly target the dependency
+        subprocess.run(
+            ["uv", "add", "dayhoff-tools@latest", "--group", "common"], check=True
+        )
+        print(
+            "Update complete! Run 'uv sync --group common' or relevant sync command if needed."
+        )
     except subprocess.CalledProcessError as e:
         print(f"Error occurred while updating: {e}")
-        sys.exit(1)
-    except FileNotFoundError:
-        print("Error: 'uv' command not found. Is uv installed and in PATH?")
-        sys.exit(1)
 
 
 def sync_dependencies():

{dayhoff_tools-1.0.14.dist-info → dayhoff_tools-1.0.16.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.3
 Name: dayhoff-tools
-Version: 1.0.14
+Version: 1.0.16
 Summary: Common tools for all the repos at Dayhoff Labs
 Author: Daniel Martin-Alarcon
 Author-email: dma@dayhofflabs.com
@@ -23,8 +23,8 @@ Requires-Dist: questionary (>=2.0.1) ; extra == "full"
 Requires-Dist: rdkit-pypi (>=2022.9.5) ; extra == "full"
 Requires-Dist: requests (>=2.31.0)
 Requires-Dist: sqlalchemy (>=2.0.40,<3.0.0) ; extra == "full"
-Requires-Dist: torch (==2.4.0+cu121) ; extra == "full"
-Requires-Dist: torchvision (==0.19.0+cu121) ; extra == "full"
+Requires-Dist: torch (>=2.1.0) ; extra == "full"
+Requires-Dist: torchvision (>=0.16.0) ; extra == "full"
 Requires-Dist: transformers (==4.36.2) ; extra == "full"
 Requires-Dist: typer (>=0.9.0)
 Description-Content-Type: text/markdown

{dayhoff_tools-1.0.14.dist-info → dayhoff_tools-1.0.16.dist-info}/RECORD

@@ -5,7 +5,7 @@ dayhoff_tools/cli/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
 dayhoff_tools/cli/cloud_commands.py,sha256=KiYEuD3nSg8QPWBYfrhdze2La_CJe4iqK-8uOAHyS8U,35827
 dayhoff_tools/cli/main.py,sha256=yorL117hknzhNybt7CTz4oKXVuQRIDXPl7huIEWga-M,3666
 dayhoff_tools/cli/swarm_commands.py,sha256=5EyKj8yietvT5lfoz8Zx0iQvVaNgc3SJX1z2zQR6o6M,5614
-dayhoff_tools/cli/utility_commands.py,sha256=-Fe7CkcIZ8e7UWlKO-P2Dgm1p3yg-GOsXcnDwxw5uxQ,14851
+dayhoff_tools/cli/utility_commands.py,sha256=vnHhYzAOLOGYqjLSCRInbSOEyRC3iXKnuYMW6hezkrc,14948
 dayhoff_tools/deployment/base.py,sha256=u-AjbtHnFLoLt33dhYXHIpV-6jcieMEHHGBGN_U9Hm0,15626
 dayhoff_tools/deployment/deploy_aws.py,sha256=O0gQxHioSU_sNU8T8MD4wSOPvWc--V8eRRZzlRu035I,16446
 dayhoff_tools/deployment/deploy_gcp.py,sha256=DxBM4sUzwPK9RWLP9bSfr38n1HHl-TVrp4TsbdN8pUA,5795
@@ -25,7 +25,7 @@ dayhoff_tools/sqlite.py,sha256=jV55ikF8VpTfeQqqlHSbY8OgfyfHj8zgHNpZjBLos_E,18672
 dayhoff_tools/structure.py,sha256=ufN3gAodQxhnt7psK1VTQeu9rKERmo_PhoxIbB4QKMw,27660
 dayhoff_tools/uniprot.py,sha256=BZYJQF63OtPcBBnQ7_P9gulxzJtqyorgyuDiPeOJqE4,16456
 dayhoff_tools/warehouse.py,sha256=TqV8nex1AluNaL4JuXH5zuu9P7qmE89lSo6f_oViy6U,14965
-dayhoff_tools-1.0.14.dist-info/METADATA,sha256=ETX-FKwoWoiJWORoRDTjH-1kHsThGB07RTdWfCgBuLk,2274
-dayhoff_tools-1.0.14.dist-info/WHEEL,sha256=fGIA9gx4Qxk2KDKeNJCbOEwSrmLtjWCwzBz351GyrPQ,88
-dayhoff_tools-1.0.14.dist-info/entry_points.txt,sha256=iAf4jteNqW3cJm6CO6czLxjW3vxYKsyGLZ8WGmxamSc,49
-dayhoff_tools-1.0.14.dist-info/RECORD,,
+dayhoff_tools-1.0.16.dist-info/METADATA,sha256=LBjBUaTBwD0mOjKSFwdKdK2dD0UPaAgbEwoim8tfDkM,2262
+dayhoff_tools-1.0.16.dist-info/WHEEL,sha256=b4K_helf-jlQoXBBETfwnf4B04YC67LOev0jo4fX5m8,88
+dayhoff_tools-1.0.16.dist-info/entry_points.txt,sha256=iAf4jteNqW3cJm6CO6czLxjW3vxYKsyGLZ8WGmxamSc,49
+dayhoff_tools-1.0.16.dist-info/RECORD,,

{dayhoff_tools-1.0.14.dist-info → dayhoff_tools-1.0.16.dist-info}/WHEEL

@@ -1,4 +1,4 @@
 Wheel-Version: 1.0
-Generator: poetry-core 2.1.2
+Generator: poetry-core 2.1.3
 Root-Is-Purelib: true
 Tag: py3-none-any