datamint 2.1.2__py3-none-any.whl → 2.1.4__py3-none-any.whl

datamint/dataset/dataset.py

@@ -119,7 +119,7 @@ class DatamintDataset(DatamintBaseDataset):
             raise ValueError("semantic_seg_merge_strategy can only be used if return_as_semantic_segmentation is True")
 
     def _load_segmentations(self,
-                            annotations: list[Annotation],
+                            annotations: Sequence[Annotation],
                             img_shape) -> tuple[dict[str, list], dict[str, list]]:
         """
         Load segmentations from annotations.
@@ -168,7 +168,7 @@ class DatamintDataset(DatamintBaseDataset):
             # seg = np.array(seg)
 
             seg = torch.from_numpy(seg)
-            seg = seg == 255   # binary mask
+            seg = seg != 0   # binary mask
             # map the segmentation label to the code
             if self.return_frame_by_frame:
                 frame_index = 0

{datamint-2.1.2.dist-info → datamint-2.1.4.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: datamint
-Version: 2.1.2
+Version: 2.1.4
 Summary: A library for interacting with the Datamint API, designed for efficient data management, processing and Deep Learning workflows.
 Requires-Python: >=3.10
 Classifier: Programming Language :: Python :: 3
@@ -21,7 +21,7 @@ Requires-Dist: humanize (>=4.0.0,<5.0.0)
 Requires-Dist: lazy-loader (>=0.3.0)
 Requires-Dist: lightning
 Requires-Dist: matplotlib
-Requires-Dist: medimgkit (>=0.6.4)
+Requires-Dist: medimgkit (>=0.6.6)
 Requires-Dist: nest-asyncio (>=1.0.0,<2.0.0)
 Requires-Dist: nibabel (>=4.0.0)
 Requires-Dist: numpy

{datamint-2.1.2.dist-info → datamint-2.1.4.dist-info}/RECORD

@@ -25,7 +25,7 @@ datamint/configs.py,sha256=Bdp6NydYwyCJ2dk19_gf_o3M2ZyQOmMHpLi8wEWNHUk,1426
 datamint/dataset/__init__.py,sha256=4PlUKSvVhdfQvvuq8jQXrkdqnot-iTTizM3aM1vgSwg,47
 datamint/dataset/annotation.py,sha256=qN1IMjdfLD2ceQ6va3l76jOXA8Vb_c-eBk1oWQu6hW0,7994
 datamint/dataset/base_dataset.py,sha256=xdWnYNZ6yKi__YGkrJ3hssiljRV3InGlJn8zDcgJnp8,49547
-datamint/dataset/dataset.py,sha256=huUOyBRGVtcx0tcpX2FrsWn7Vsqy5i5e_J52gxR_29A,28637
+datamint/dataset/dataset.py,sha256=w5M0K0V-fUEt22_OzhpKc7DxDVYRIGW6Ado0q8iErC4,28639
 datamint/entities/__init__.py,sha256=tbHE7rZb0R9Hm-Dc8VWEq3PlRl7BYOzffumrV0ZdsMs,444
 datamint/entities/annotation.py,sha256=ochAEh_JqxAe_FyYTNUfPT47KiIAG7CkBTim52bu7M8,6636
 datamint/entities/base_entity.py,sha256=DniakCgJ-gV7Hz8VKQA_dRYTp4DU5rcjLBVOuD1aZuA,1902
@@ -44,7 +44,7 @@ datamint/logging.yaml,sha256=tOMxtc2UmwlIMTK6ljtnBwTco1PNrPeq3mx2iMuSbiw,482
 datamint/utils/logging_utils.py,sha256=9pRoaPrWu2jOdDCiAoUsjEdP5ZwaealWL3hjUqFvx9g,4022
 datamint/utils/torchmetrics.py,sha256=lwU0nOtsSWfebyp7dvjlAggaqXtj5ohSEUXOg3L0hJE,2837
 datamint/utils/visualization.py,sha256=yaUVAOHar59VrGUjpAWv5eVvQSfztFG0eP9p5Vt3l-M,4470
-datamint-2.1.2.dist-info/METADATA,sha256=K-uz7hcmvpOky8LA-r1hkOBMsXyRW1us9qT8F63mn6s,4203
-datamint-2.1.2.dist-info/WHEEL,sha256=zp0Cn7JsFoX2ATtOhtaFYIiE2rmFAD4OcMhtUki8W3U,88
-datamint-2.1.2.dist-info/entry_points.txt,sha256=mn5H6jPjO-rY0W0CAZ6Z_KKWhMLvyVaSpoqk77jlTI4,145
-datamint-2.1.2.dist-info/RECORD,,
+datamint-2.1.4.dist-info/METADATA,sha256=381mZxgQL220XnND_EUK6UPblHT4gAMze3yRzUUfF34,4203
+datamint-2.1.4.dist-info/WHEEL,sha256=zp0Cn7JsFoX2ATtOhtaFYIiE2rmFAD4OcMhtUki8W3U,88
+datamint-2.1.4.dist-info/entry_points.txt,sha256=mn5H6jPjO-rY0W0CAZ6Z_KKWhMLvyVaSpoqk77jlTI4,145
+datamint-2.1.4.dist-info/RECORD,,