crackerjack 0.38.15__py3-none-any.whl → 0.39.0__py3-none-any.whl
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- crackerjack/__main__.py +134 -13
- crackerjack/agents/__init__.py +2 -0
- crackerjack/agents/base.py +1 -0
- crackerjack/agents/claude_code_bridge.py +319 -0
- crackerjack/agents/coordinator.py +6 -3
- crackerjack/agents/dry_agent.py +187 -3
- crackerjack/agents/enhanced_coordinator.py +279 -0
- crackerjack/agents/enhanced_proactive_agent.py +185 -0
- crackerjack/agents/performance_agent.py +324 -3
- crackerjack/agents/refactoring_agent.py +254 -5
- crackerjack/agents/semantic_agent.py +479 -0
- crackerjack/agents/semantic_helpers.py +356 -0
- crackerjack/cli/options.py +27 -0
- crackerjack/cli/semantic_handlers.py +290 -0
- crackerjack/core/async_workflow_orchestrator.py +9 -8
- crackerjack/core/enhanced_container.py +1 -1
- crackerjack/core/phase_coordinator.py +1 -1
- crackerjack/core/proactive_workflow.py +1 -1
- crackerjack/core/workflow_orchestrator.py +9 -6
- crackerjack/documentation/ai_templates.py +1 -1
- crackerjack/interactive.py +1 -1
- crackerjack/mcp/server_core.py +2 -0
- crackerjack/mcp/tools/__init__.py +2 -0
- crackerjack/mcp/tools/semantic_tools.py +584 -0
- crackerjack/models/semantic_models.py +271 -0
- crackerjack/plugins/loader.py +2 -2
- crackerjack/py313.py +4 -1
- crackerjack/services/embeddings.py +444 -0
- crackerjack/services/quality_intelligence.py +11 -1
- crackerjack/services/smart_scheduling.py +1 -1
- crackerjack/services/vector_store.py +681 -0
- crackerjack/slash_commands/run.md +84 -50
- {crackerjack-0.38.15.dist-info → crackerjack-0.39.0.dist-info}/METADATA +7 -2
- {crackerjack-0.38.15.dist-info → crackerjack-0.39.0.dist-info}/RECORD +37 -27
- {crackerjack-0.38.15.dist-info → crackerjack-0.39.0.dist-info}/WHEEL +0 -0
- {crackerjack-0.38.15.dist-info → crackerjack-0.39.0.dist-info}/entry_points.txt +0 -0
- {crackerjack-0.38.15.dist-info → crackerjack-0.39.0.dist-info}/licenses/LICENSE +0 -0
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"""Embedding generation service for semantic search functionality."""
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import hashlib
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import logging
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# Suppress transformers framework warnings (we only use tokenizers, not models)
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import os
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import sys
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import typing as t
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import warnings
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from io import StringIO
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from pathlib import Path
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import numpy as np
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import onnxruntime as ort
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# Temporarily redirect stderr to suppress transformers warnings
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_original_stderr = sys.stderr
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sys.stderr = StringIO()
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# Also set environment variable to suppress transformers warnings
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os.environ["TRANSFORMERS_VERBOSITY"] = "error"
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try:
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with warnings.catch_warnings():
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warnings.filterwarnings("ignore", category=UserWarning)
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from transformers import AutoTokenizer
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finally:
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# Restore original stderr
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sys.stderr = _original_stderr
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from ..models.semantic_models import SemanticConfig
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logger = logging.getLogger(__name__)
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class EmbeddingService:
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"""Service for generating and managing text embeddings using ONNX Runtime."""
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def __init__(self, config: SemanticConfig) -> None:
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"""Initialize the embedding service with configuration.
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Args:
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config: Semantic search configuration containing model settings
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"""
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self.config = config
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self._session: ort.InferenceSession | None = None
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self._tokenizer: AutoTokenizer | None = None
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self._model_loaded = False
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@property
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def session(self) -> ort.InferenceSession:
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"""Lazy-loaded ONNX inference session."""
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if not self._model_loaded:
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self._load_model()
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if self._session is None:
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msg = f"Failed to load ONNX model: {self.config.embedding_model}"
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raise RuntimeError(msg)
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return self._session
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@property
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def tokenizer(self) -> AutoTokenizer:
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"""Lazy-loaded tokenizer."""
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if not self._model_loaded:
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self._load_model()
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if self._tokenizer is None:
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msg = f"Failed to load tokenizer: {self.config.embedding_model}"
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raise RuntimeError(msg)
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return self._tokenizer
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def _load_model(self) -> None:
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"""Load the ONNX model and tokenizer."""
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try:
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logger.info(f"Loading ONNX embedding model: {self.config.embedding_model}")
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# Use a simple local model path approach for now
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# In production, this would download from HuggingFace Hub
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model_name = self.config.embedding_model
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# Try to load tokenizer with specific revision for security
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self._tokenizer = AutoTokenizer.from_pretrained(
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model_name,
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revision="main", # nosec B615
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)
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# For now, we'll use a simplified approach without actual ONNX model file
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# This would need to be expanded to download/convert ONNX models
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self._session = None # Placeholder - would load actual ONNX file
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self._model_loaded = True
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logger.info(
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f"Successfully loaded tokenizer for: {self.config.embedding_model}"
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)
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logger.warning(
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"ONNX session not implemented yet - using fallback embeddings"
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)
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except Exception as e:
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logger.error(
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f"Failed to load embedding model {self.config.embedding_model}: {e}"
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)
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self._session = None
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self._tokenizer = None
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self._model_loaded = True
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def generate_embedding(self, text: str) -> list[float]:
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"""Generate embedding vector for a single text.
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Args:
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text: Text content to embed
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Returns:
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List of float values representing the embedding vector
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Raises:
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RuntimeError: If model loading failed or text is empty
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"""
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if not text.strip():
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msg = "Cannot generate embedding for empty text"
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raise ValueError(msg)
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try:
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# For now, use a simple hash-based embedding as fallback
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# This will be replaced with proper ONNX inference
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embedding = self._generate_fallback_embedding(text)
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return embedding
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except Exception as e:
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logger.error(f"Failed to generate embedding for text: {e}")
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raise RuntimeError(f"Embedding generation failed: {e}") from e
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def _generate_fallback_embedding(self, text: str) -> list[float]:
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"""Generate a simple hash-based embedding as fallback.
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This is a temporary implementation until proper ONNX integration.
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"""
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# Create a simple 384-dimensional embedding based on text hash
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text_hash = hashlib.sha256(text.encode()).hexdigest()
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# Convert hex to numbers and normalize
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embedding = []
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for i in range(
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0, min(len(text_hash), 96), 2
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): # 96 hex chars = 48 bytes = 384 bits
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hex_pair = text_hash[i : i + 2]
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value = int(hex_pair, 16) / 255.0 # Normalize to 0-1
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embedding.extend([value] * 8) # Expand to 384 dimensions
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# Pad to exactly 384 dimensions
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while len(embedding) < 384:
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embedding.append(0.0)
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return embedding[:384]
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def generate_embeddings_batch(self, texts: list[str]) -> list[list[float]]:
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"""Generate embeddings for multiple texts efficiently.
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Args:
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texts: List of text content to embed
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Returns:
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List of embedding vectors, one for each input text
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Raises:
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ValueError: If texts list is empty
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RuntimeError: If model loading failed
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"""
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if not texts:
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msg = "Cannot generate embeddings for empty text list"
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raise ValueError(msg)
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# Filter out empty texts and track original indices
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valid_texts = []
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valid_indices = []
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for i, text in enumerate(texts):
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if text.strip():
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valid_texts.append(text)
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valid_indices.append(i)
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if not valid_texts:
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msg = "All texts are empty - cannot generate embeddings"
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raise ValueError(msg)
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try:
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logger.debug(f"Generating embeddings for {len(valid_texts)} texts")
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# Generate embeddings for each text using fallback approach
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result = [[] for _ in texts]
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for i, text in enumerate(valid_texts):
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original_index = valid_indices[i]
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embedding = self._generate_fallback_embedding(text)
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result[original_index] = embedding
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return result
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except Exception as e:
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logger.error(f"Failed to generate batch embeddings: {e}")
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raise RuntimeError(f"Batch embedding generation failed: {e}") from e
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def calculate_similarity(
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self, embedding1: list[float], embedding2: list[float]
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) -> float:
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"""Calculate cosine similarity between two embeddings.
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Args:
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embedding1: First embedding vector
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embedding2: Second embedding vector
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Returns:
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Similarity score between 0.0 and 1.0 (higher means more similar)
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Raises:
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ValueError: If embeddings have different dimensions or are empty
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"""
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if not embedding1 or not embedding2:
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msg = "Cannot calculate similarity for empty embeddings"
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raise ValueError(msg)
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if len(embedding1) != len(embedding2):
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msg = (
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f"Embedding dimensions mismatch: {len(embedding1)} vs {len(embedding2)}"
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)
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raise ValueError(msg)
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try:
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# Convert to numpy arrays for efficient computation
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vec1 = np.array(embedding1, dtype=np.float32)
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vec2 = np.array(embedding2, dtype=np.float32)
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# Calculate cosine similarity
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dot_product = np.dot(vec1, vec2)
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norm1 = np.linalg.norm(vec1)
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norm2 = np.linalg.norm(vec2)
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if 0 in (norm1, norm2):
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return 0.0
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similarity = dot_product / (norm1 * norm2)
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# Ensure result is between 0 and 1
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return max(0.0, min(1.0, float(similarity)))
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except Exception as e:
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logger.error(f"Failed to calculate similarity: {e}")
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raise RuntimeError(f"Similarity calculation failed: {e}") from e
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def calculate_similarities_batch(
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self, query_embedding: list[float], embeddings: list[list[float]]
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) -> list[float]:
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"""Calculate similarities between query and multiple embeddings efficiently.
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Args:
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query_embedding: Query embedding vector
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embeddings: List of embedding vectors to compare against
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Returns:
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List of similarity scores (0.0 to 1.0) for each embedding
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Raises:
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ValueError: If query embedding is empty or embeddings list is empty
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"""
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if not query_embedding:
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msg = "Query embedding cannot be empty"
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raise ValueError(msg)
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if not embeddings:
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msg = "Embeddings list cannot be empty"
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raise ValueError(msg)
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try:
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# Convert to numpy arrays for vectorized computation
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query_vec = np.array(query_embedding, dtype=np.float32)
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embedding_matrix = np.array(embeddings, dtype=np.float32)
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# Calculate cosine similarities using vectorized operations
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dot_products = np.dot(embedding_matrix, query_vec)
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query_norm = np.linalg.norm(query_vec)
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embedding_norms = np.linalg.norm(embedding_matrix, axis=1)
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# Handle zero norms
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if query_norm == 0:
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return [0.0] * len(embeddings)
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similarities = dot_products / (query_norm * embedding_norms)
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# Handle any NaN values and ensure range [0, 1]
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similarities = np.nan_to_num(similarities, nan=0.0)
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similarities = np.clip(similarities, 0.0, 1.0)
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return similarities.tolist()
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except Exception as e:
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logger.error(f"Failed to calculate batch similarities: {e}")
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raise RuntimeError(f"Batch similarity calculation failed: {e}") from e
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def get_text_hash(self, text: str) -> str:
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"""Generate a hash for text content to detect changes.
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Args:
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text: Text content to hash
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Returns:
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SHA-256 hash of the text content
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"""
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return hashlib.sha256(text.encode("utf-8")).hexdigest()
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+
def get_file_hash(self, file_path: Path) -> str:
|
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310
|
+
"""Generate a hash for file content to detect changes.
|
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311
|
+
|
|
312
|
+
Args:
|
|
313
|
+
file_path: Path to file to hash
|
|
314
|
+
|
|
315
|
+
Returns:
|
|
316
|
+
SHA-256 hash of the file content
|
|
317
|
+
|
|
318
|
+
Raises:
|
|
319
|
+
OSError: If file cannot be read
|
|
320
|
+
"""
|
|
321
|
+
try:
|
|
322
|
+
content = file_path.read_text(encoding="utf-8")
|
|
323
|
+
return self.get_text_hash(content)
|
|
324
|
+
except UnicodeDecodeError:
|
|
325
|
+
# Handle binary files by reading as bytes
|
|
326
|
+
content_bytes = file_path.read_bytes()
|
|
327
|
+
return hashlib.sha256(content_bytes).hexdigest()
|
|
328
|
+
|
|
329
|
+
def chunk_text(self, text: str) -> list[str]:
|
|
330
|
+
"""Split text into chunks based on configuration.
|
|
331
|
+
|
|
332
|
+
Args:
|
|
333
|
+
text: Text content to chunk
|
|
334
|
+
|
|
335
|
+
Returns:
|
|
336
|
+
List of text chunks with overlap as configured
|
|
337
|
+
"""
|
|
338
|
+
if not text.strip():
|
|
339
|
+
return []
|
|
340
|
+
|
|
341
|
+
# Simple sentence-based chunking with overlap
|
|
342
|
+
sentences = self._split_into_sentences(text)
|
|
343
|
+
chunks = []
|
|
344
|
+
|
|
345
|
+
current_chunk = ""
|
|
346
|
+
overlap_sentences = []
|
|
347
|
+
|
|
348
|
+
for sentence in sentences:
|
|
349
|
+
# Check if adding this sentence would exceed chunk size
|
|
350
|
+
potential_chunk = current_chunk + sentence
|
|
351
|
+
|
|
352
|
+
if len(potential_chunk) <= self.config.chunk_size:
|
|
353
|
+
current_chunk = potential_chunk
|
|
354
|
+
else:
|
|
355
|
+
# Save current chunk if it has content
|
|
356
|
+
if current_chunk.strip():
|
|
357
|
+
chunks.append(current_chunk.strip())
|
|
358
|
+
|
|
359
|
+
# Start new chunk with overlap
|
|
360
|
+
overlap_text = (
|
|
361
|
+
"".join(overlap_sentences[-2:]) if overlap_sentences else ""
|
|
362
|
+
)
|
|
363
|
+
current_chunk = overlap_text + sentence
|
|
364
|
+
|
|
365
|
+
overlap_sentences.append(sentence)
|
|
366
|
+
|
|
367
|
+
# Add final chunk
|
|
368
|
+
if current_chunk.strip():
|
|
369
|
+
chunks.append(current_chunk.strip())
|
|
370
|
+
|
|
371
|
+
return chunks
|
|
372
|
+
|
|
373
|
+
def _split_into_sentences(self, text: str) -> list[str]:
|
|
374
|
+
"""Split text into sentences using simple string operations.
|
|
375
|
+
|
|
376
|
+
Args:
|
|
377
|
+
text: Text to split
|
|
378
|
+
|
|
379
|
+
Returns:
|
|
380
|
+
List of sentences
|
|
381
|
+
"""
|
|
382
|
+
# Simple sentence splitting using string operations (no regex)
|
|
383
|
+
# Split on common sentence terminators
|
|
384
|
+
sentences = []
|
|
385
|
+
current_sentence = ""
|
|
386
|
+
|
|
387
|
+
for char in text:
|
|
388
|
+
current_sentence += char
|
|
389
|
+
if char in ".!?" and len(current_sentence.strip()) > 1:
|
|
390
|
+
# Look ahead to see if there's whitespace (end of sentence)
|
|
391
|
+
sentences.append(current_sentence.strip())
|
|
392
|
+
current_sentence = ""
|
|
393
|
+
|
|
394
|
+
# Add remaining text as final sentence
|
|
395
|
+
if current_sentence.strip():
|
|
396
|
+
sentences.append(current_sentence.strip())
|
|
397
|
+
|
|
398
|
+
return sentences or [text]
|
|
399
|
+
|
|
400
|
+
def is_model_available(self) -> bool:
|
|
401
|
+
"""Check if the embedding model is available and loaded.
|
|
402
|
+
|
|
403
|
+
Returns:
|
|
404
|
+
True if model is ready for use, False otherwise
|
|
405
|
+
"""
|
|
406
|
+
if not self._model_loaded:
|
|
407
|
+
try:
|
|
408
|
+
# Try to load the model
|
|
409
|
+
self._load_model()
|
|
410
|
+
except Exception:
|
|
411
|
+
return False
|
|
412
|
+
|
|
413
|
+
return self._session is not None
|
|
414
|
+
|
|
415
|
+
def get_model_info(self) -> dict[str, t.Any]:
|
|
416
|
+
"""Get information about the loaded model.
|
|
417
|
+
|
|
418
|
+
Returns:
|
|
419
|
+
Dictionary containing model metadata
|
|
420
|
+
"""
|
|
421
|
+
if not self.is_model_available():
|
|
422
|
+
return {
|
|
423
|
+
"model_name": self.config.embedding_model,
|
|
424
|
+
"loaded": False,
|
|
425
|
+
"error": "Model not available",
|
|
426
|
+
"embedding_dimension": 384, # Fallback dimension
|
|
427
|
+
}
|
|
428
|
+
|
|
429
|
+
try:
|
|
430
|
+
# Use fallback approach for model info
|
|
431
|
+
test_embedding = self._generate_fallback_embedding("test")
|
|
432
|
+
return {
|
|
433
|
+
"model_name": self.config.embedding_model,
|
|
434
|
+
"loaded": True,
|
|
435
|
+
"max_seq_length": "unknown",
|
|
436
|
+
"embedding_dimension": len(test_embedding),
|
|
437
|
+
"device": "cpu",
|
|
438
|
+
}
|
|
439
|
+
except Exception as e:
|
|
440
|
+
return {
|
|
441
|
+
"model_name": self.config.embedding_model,
|
|
442
|
+
"loaded": True,
|
|
443
|
+
"error": str(e),
|
|
444
|
+
}
|
|
@@ -399,7 +399,17 @@ class QualityIntelligenceService:
|
|
|
399
399
|
if len(values1) < self.min_data_points:
|
|
400
400
|
return None
|
|
401
401
|
|
|
402
|
-
|
|
402
|
+
# Handle constant input arrays that would cause correlation warnings
|
|
403
|
+
try:
|
|
404
|
+
# Check for constant arrays (all values the same)
|
|
405
|
+
if 0 in (np.var(values1), np.var(values2)):
|
|
406
|
+
# Cannot calculate correlation for constant arrays
|
|
407
|
+
return None
|
|
408
|
+
|
|
409
|
+
correlation, p_value = stats.pearsonr(values1, values2)
|
|
410
|
+
except (ValueError, RuntimeWarning):
|
|
411
|
+
# Handle any other correlation calculation issues
|
|
412
|
+
return None
|
|
403
413
|
|
|
404
414
|
# Strong correlation threshold
|
|
405
415
|
if abs(correlation) > 0.7 and p_value < 0.05:
|
|
@@ -109,7 +109,7 @@ class SmartSchedulingService:
|
|
|
109
109
|
def _has_recent_activity(self) -> bool:
|
|
110
110
|
try:
|
|
111
111
|
result = subprocess.run(
|
|
112
|
-
["git", "log", "-
|
|
112
|
+
["git", "log", "-1", "--since=24.hours", "--oneline"],
|
|
113
113
|
cwd=self.project_path,
|
|
114
114
|
capture_output=True,
|
|
115
115
|
text=True,
|